miRNA Card

miRNA General Information
miRNA ID hsa-miR-3683
Description Homo sapiens miR-3683 stem-loop
Comment None
Experiment Illumina [1]
Sequence UGCGACAUUGGAAGUAGUAUCA
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr2:20258243|20283486 hsa-miR-3683 1 1 1

Confidence 2 (2 of 3 tools predicted)

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr2:232816896|232817032 hsa-miR-3683 1 0 0
chr9:35057164|35057447 hsa-miR-3683 1 0 0
chr14:72969924|72970032 hsa-miR-3683 0 1 0
chr8:96230032|96230163 hsa-miR-3683 0 1 0
chr15:93020088|93020258 hsa-miR-3683 0 1 0
chr12:56240257|56240358 hsa-miR-3683 0 1 0
chr11:68065786|68066443 hsa-miR-3683 0 1 0
chr12:54257588|54257667 hsa-miR-3683 0 1 0
chr17:81511184|81511374 hsa-miR-3683 0 1 0
chr17:81706940|81707204 hsa-miR-3683 0 1 0
chr12:54257532|54257667 hsa-miR-3683 0 1 0
chr13:76881871|76882040 hsa-miR-3683 1 0 0
chr19:14054063|14054176 hsa-miR-3683 1 0 0
chr10:87746240|87746464 hsa-miR-3683 1 0 0
chr11:64237189|64237577 hsa-miR-3683 1 0 0
chr14:20316439|20316537 hsa-miR-3683 1 0 0
chr17:81511252|81511393 hsa-miR-3683 0 1 0
chr17:81843418|81843547 hsa-miR-3683 0 1 0
chr19:6381122|6381401 hsa-miR-3683 0 1 0
chr1:206496256|206496410 hsa-miR-3683 0 1 0
chr12:56240257|56240364 hsa-miR-3683 0 1 0
chr19:6381122|6381398 hsa-miR-3683 0 1 0
chr14:68874413|68874586 hsa-miR-3683 0 1 0
chrX:66032468|66032618 hsa-miR-3683 0 1 0
chr8:28129512|28129663 hsa-miR-3683 0 1 0
chr17:18247020|18247231 hsa-miR-3683 0 1 0
chr15:71748466|71748594 hsa-miR-3683 0 1 0
chr8:69563940|69564061 hsa-miR-3683 0 1 0
chr16:56609005|56609344 hsa-miR-3683 0 1 0
chr17:81843418|81843609 hsa-miR-3683 0 1 0
chr3:43349824|43349952 hsa-miR-3683 0 1 0
chr10:97686927|97687032 hsa-miR-3683 0 1 0
chr5:42718843|42718996 hsa-miR-3683 0 1 0
chr15:93020119~93020258 hsa-miR-3683 0 1 0
chr19:6381122~6381401 hsa-miR-3683 0 1 0
chr17:81511252~81511393 hsa-miR-3683 0 1 0
chr6:31632359~31632482 hsa-miR-3683 0 1 0
chr15:93020088~93020258 hsa-miR-3683 0 1 0
chr4:87176757|87178505 hsa-miR-3683 0 1 0
chr6:31632347~31632482 hsa-miR-3683 0 1 0
chr9:89605713~89605845 hsa-miR-3683 0 1 0
chr12:54257532~54257667 hsa-miR-3683 0 1 0
chr13:45390798|45391072 hsa-miR-3683 0 1 0
chr16:56609005|56609403 hsa-miR-3683 0 1 0
chr2:233167147|233167300 hsa-miR-3683 0 1 0
chr8:27343593|27343684 hsa-miR-3683 0 1 0
chr22:49961655|49961772 hsa-miR-3683 0 1 0
chr4:87176851|87178593 hsa-miR-3683 0 1 0
chr17:7849113|7849271 hsa-miR-3683 1 0 0
chr1:182886938|182887150 hsa-miR-3683 1 0 0
chr19:14054063|14054186 hsa-miR-3683 1 0 0
chr3:23977293|23977414 hsa-miR-3683 1 0 0
chr1:157122419|157122572 hsa-miR-3683 1 0 0
chr19:9895917|9896041 hsa-miR-3683 0 1 0
chr10:88947249|88947358 hsa-miR-3683 0 1 0
chr19:17219244|17219387 hsa-miR-3683 0 1 0
chr17:81706953|81707204 hsa-miR-3683 0 1 0
chr17:81843418|81843628 hsa-miR-3683 0 1 0
chr9:89605710|89605845 hsa-miR-3683 0 1 0
chr17:50090118|50090226 hsa-miR-3683 0 1 0
chr1:151408122|151408473 hsa-miR-3683 0 1 0
chr15:25405461|25411971 hsa-miR-3683 0 1 0
chr5:138467589|138467976 hsa-miR-3683 0 1 0
chr17:81511229|81511416 hsa-miR-3683 0 1 0
chr1:1486110|1486235 hsa-miR-3683 0 1 0
chr12:54257549|54257667 hsa-miR-3683 0 1 0
chr1:206496217|206496304 hsa-miR-3683 0 1 0
chr6:31632351|31632482 hsa-miR-3683 0 1 0
chr17:81511229|81511374 hsa-miR-3683 0 1 0
chr17:18246972|18247231 hsa-miR-3683 0 1 0
chr9:122908943|122909077 hsa-miR-3683 0 1 0
chr11:118901179|118901399 hsa-miR-3683 0 1 0
chr6:31632292|31632482 hsa-miR-3683 0 1 0
chr17:81843418|81843539 hsa-miR-3683 0 1 0
chr10:79313035|79313231 hsa-miR-3683 1 0 0
chr2:232816937|232817032 hsa-miR-3683 1 0 0
chr2:232816892|232817032 hsa-miR-3683 1 0 0
chr7:100113349|100113703 hsa-miR-3683 0 1 0
chr17:81706984|81707204 hsa-miR-3683 0 1 0
chr17:50090062|50090211 hsa-miR-3683 0 1 0
chr1:1523844|1523964 hsa-miR-3683 0 1 0
chr15:93020012|93020158 hsa-miR-3683 0 1 0
chr9:128150338|128151972 hsa-miR-3683 0 1 0
chr15:93020029|93020186 hsa-miR-3683 0 1 0
chr14:103736170|103737799 hsa-miR-3683 0 1 0
chr4:4281783|4281851 hsa-miR-3683 0 1 0
chr1:202585338|202585472 hsa-miR-3683 0 1 0
chr17:81704244|81704370 hsa-miR-3683 0 1 0
chr4:186589010|186589134 hsa-miR-3683 0 1 0
chr4:122921996|122922156 hsa-miR-3683 0 1 0
chr7:27193235|27193349 hsa-miR-3683 0 1 0
chr17:81843362|81843609 hsa-miR-3683 0 1 0
chr1:58575723|58575913 hsa-miR-3683 1 0 0
chr1:182887091|182887258 hsa-miR-3683 1 0 0
chr15:63324074|63324178 hsa-miR-3683 1 0 0
chr14:34939935|34940219 hsa-miR-3683 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-3683 NR1D2 nuclear receptor subfamily 1 group D member 2 HGNC:7963 details
hsa-miR-3683 M6PR mannose-6-phosphate receptor, cation dependent HGNC:6752 details
hsa-miR-3683 HOXC11 homeobox C11 HGNC:5123 details
hsa-miR-3683 FN3KRP fructosamine 3 kinase related protein HGNC:25700 details
hsa-miR-3683 NELFE negative elongation factor complex member E HGNC:13974 details
hsa-miR-3683 HOOK3 hook microtubule tethering protein 3 HGNC:23576 details
hsa-miR-3683 ACTR1A actin related protein 1A HGNC:167 details
hsa-miR-3683 ANKRD42 ankyrin repeat domain 42 HGNC:26752 details
hsa-miR-3683 XKR4 XK related 4 HGNC:29394 details
hsa-miR-3683 REPIN1 replication initiator 1 HGNC:17922 details
hsa-miR-3683 LGALS3BP galectin 3 binding protein HGNC:6564 details
hsa-miR-3683 THAP1 THAP domain containing 1 HGNC:20856 details
hsa-miR-3683 MBL2 mannose binding lectin 2 HGNC:6922 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab