miRNA Card

miRNA General Information
miRNA ID hsa-miR-3713
Description Homo sapiens miR-3713 stem-loop
Comment None
Experiment SOLiD [1]
Sequence GGUAUCCGUUUGGGGAUGGU
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr3:4983253|4983441 hsa-miR-3713 1 0 0
chr17:82083202|82083321 hsa-miR-3713 1 0 0
chr19:7634218|7634346 hsa-miR-3713 1 0 0
chr12:27697557|27697703 hsa-miR-3713 1 0 0
chr19:4429756|4430641 hsa-miR-3713 1 0 0
chr17:42798130|42798517 hsa-miR-3713 1 0 0
chr14:64766056|64766167 hsa-miR-3713 1 0 0
chr2:216674096|216674250 hsa-miR-3713 0 1 0
chr12:118417086|118417201 hsa-miR-3713 0 1 0
chr13:45340724|45341099 hsa-miR-3713 0 1 0
chr13:45340724|45341121 hsa-miR-3713 0 1 0
chr13:45340712|45341099 hsa-miR-3713 0 1 0
chr2:216674096|216674236 hsa-miR-3713 0 1 0
chr2:216674079|216674241 hsa-miR-3713 0 1 0
chr13:45340724|45341077 hsa-miR-3713 0 1 0
chr20:18315490|18315684 hsa-miR-3713 0 1 0
chr22:24589096|24589257 hsa-miR-3713 0 1 0
chr11:77411832|77411947 hsa-miR-3713 0 1 0
chr13:45340724|45341115 hsa-miR-3713 0 1 0
chr17:38716566|38716693 hsa-miR-3713 0 1 0
chr1:28531907|28532269 hsa-miR-3713 0 1 0
chr16:28965739|28965848 hsa-miR-3713 0 1 0
chr2:216674096|216674291 hsa-miR-3713 0 1 0
chr2:216674102|216674306 hsa-miR-3713 0 1 0
chr4:169706965|169707119 hsa-miR-3713 0 1 0
chr12:118417086|118417261 hsa-miR-3713 0 1 0
chr8:13099484|13099603 hsa-miR-3713 1 0 0
chr3:46374768|46374925 hsa-miR-3713 1 0 0
chr19:44659944|44660057 hsa-miR-3713 1 0 0
chr11:83186732|83186987 hsa-miR-3713 1 0 0
chr3:141292695|141292872 hsa-miR-3713 1 0 0
chr17:77499640|77499796 hsa-miR-3713 1 0 0
chr14:23275834|23275931 hsa-miR-3713 1 0 0
chr3:141292695|141292874 hsa-miR-3713 1 0 0
chr17:28882118|28882408 hsa-miR-3713 1 0 0
chr21:41854645|41854773 hsa-miR-3713 1 0 0
chr11:111913972|111914063 hsa-miR-3713 1 0 0
chr17:77499645|77499796 hsa-miR-3713 1 0 0
chr17:17793864|17794196 hsa-miR-3713 1 0 0
chr3:4983253|4983408 hsa-miR-3713 1 0 0
chr19:49631169|49631263 hsa-miR-3713 1 0 0
chr1:44352850|44353000 hsa-miR-3713 1 0 0
chr19:3617657|3617796 hsa-miR-3713 1 0 0
chr3:184331338|184331590 hsa-miR-3713 1 0 0
chr17:74951002|74951103 hsa-miR-3713 1 0 0
chr2:217972661|217972852 hsa-miR-3713 1 0 0
chr6:30542826|30542936 hsa-miR-3713 1 0 0
chr5:150053414|150053561 hsa-miR-3713 1 0 0
chr14:64766056|64766214 hsa-miR-3713 1 0 0
chrX:121048126|121048237 hsa-miR-3713 0 1 0
chr11:66272175|66272460 hsa-miR-3713 0 1 0
chr22:37773895|37774041 hsa-miR-3713 0 1 0
chr13:45340712|45341103 hsa-miR-3713 0 1 0
chr17:82079139|82079280 hsa-miR-3713 0 1 0
chr13:45340712|45341077 hsa-miR-3713 0 1 0
chr2:216674096|216674241 hsa-miR-3713 0 1 0
chr2:216674096|216674306 hsa-miR-3713 0 1 0
chr15:65443204|65443301 hsa-miR-3713 0 1 0
chr2:216674102|216674241 hsa-miR-3713 0 1 0
chr13:45340724|45341103 hsa-miR-3713 0 1 0
chr22:37773960|37774048 hsa-miR-3713 0 1 0
chr19:17341844|17341976 hsa-miR-3713 0 1 0
chr16:671949|672147 hsa-miR-3713 0 1 0
chr13:45340737|45341115 hsa-miR-3713 0 1 0
chr1:21824302|21824581 hsa-miR-3713 0 1 0
chr22:37773914|37774041 hsa-miR-3713 0 1 0
chr1:161365481|161365628 hsa-miR-3713 0 1 0
chr2:216674124|216674306 hsa-miR-3713 0 1 0
chr2:216674102|216674250 hsa-miR-3713 0 1 0
chr11:62518167|62518310 hsa-miR-3713 0 1 0
chr20:53575727|53575892 hsa-miR-3713 0 1 0
chr13:45340166~45341077 hsa-miR-3713 0 1 0
chr16:28965708~28965848 hsa-miR-3713 0 1 0
chr19:44659944~44660057 hsa-miR-3713 0 1 0
chr12:132726201~132726406 hsa-miR-3713 0 1 0
chr13:45340724~45341099 hsa-miR-3713 0 1 0
chr13:45340712~45341099 hsa-miR-3713 0 1 0
chr11:83186732~83186987 hsa-miR-3713 0 1 0
chr13:45340724~45341115 hsa-miR-3713 0 1 0
chr17:28350438~28350792 hsa-miR-3713 0 1 0
chr13:45340724~45341077 hsa-miR-3713 0 1 0
chr2:216674096~216674241 hsa-miR-3713 0 1 0
chr2:241689943~241690170 hsa-miR-3713 0 1 0
chr22:37773895~37774041 hsa-miR-3713 0 1 0
chr6:31971233~31971458 hsa-miR-3713 0 1 0
chr13:45340724~45341103 hsa-miR-3713 0 1 0
chr17:17793864~17794196 hsa-miR-3713 0 1 0
chr17:7229883~7230113 hsa-miR-3713 0 1 0
chr1:32650441~32650559 hsa-miR-3713 0 1 0
chr14:105855915~105856198 hsa-miR-3713 0 1 0
chr1:32695600|32695759 hsa-miR-3713 0 1 0
chr13:45340712~45341103 hsa-miR-3713 0 1 0
chr17:18270774~18270914 hsa-miR-3713 0 1 0
chr17:75566488~75566687 hsa-miR-3713 0 1 0
chr22:20057470|20057676 hsa-miR-3713 1 0 0
chr1:51634637|51634775 hsa-miR-3713 1 0 0
chr8:13099448|13099657 hsa-miR-3713 1 0 0
chrX:121048075|121048295 hsa-miR-3713 0 1 0
chr8:73878562|73878653 hsa-miR-3713 0 1 0
chr19:7985369|7985528 hsa-miR-3713 1 0 0
chr3:50334738|50334924 hsa-miR-3713 1 0 0
chr5:1446112|1446318 hsa-miR-3713 0 1 0
chr10:124998681|124998812 hsa-miR-3713 0 1 0
chr1:51789215|51789340 hsa-miR-3713 1 0 0
chr17:50076332|50076648 hsa-miR-3713 1 0 0
chr22:37485975|37486099 hsa-miR-3713 1 0 0
chr22:46374307|46374551 hsa-miR-3713 1 0 0
chr5:453954|454042 hsa-miR-3713 1 0 0
chr17:77499645|77499929 hsa-miR-3713 1 0 0
chrX:154353349|154353620 hsa-miR-3713 1 0 0
chr5:177519995|177520063 hsa-miR-3713 1 0 0
chr10:101040995|101041069 hsa-miR-3713 1 0 0
chr19:40701359|40701494 hsa-miR-3713 1 0 0
chr1:53083969|53084102 hsa-miR-3713 1 0 0
chr3:189958067|189958163 hsa-miR-3713 1 0 0
chr6:20197377|20197540 hsa-miR-3713 1 0 0
chr3:184331338|184331479 hsa-miR-3713 1 0 0
chr15:76338677|76338911 hsa-miR-3713 1 0 0
chr2:213317769|213317884 hsa-miR-3713 1 0 0
chrX:2918082|2918183 hsa-miR-3713 1 0 0
chr22:37678535|37679683 hsa-miR-3713 1 0 0
chr12:50461184|50461347 hsa-miR-3713 1 0 0
chr3:4983246|4983441 hsa-miR-3713 1 0 0
chr3:184331333|184331606 hsa-miR-3713 1 0 0
chr13:110639646|110639826 hsa-miR-3713 1 0 0
chr3:4983253|4983458 hsa-miR-3713 1 0 0
chr3:51392846|51392977 hsa-miR-3713 1 0 0
chr11:10878870|10879051 hsa-miR-3713 0 1 0
chr12:6937220|6937362 hsa-miR-3713 0 1 0
chr12:118417102|118417266 hsa-miR-3713 0 1 0
chr14:101628881|101629249 hsa-miR-3713 0 1 0
chr16:28965708|28965848 hsa-miR-3713 0 1 0
chr14:36477068|36477821 hsa-miR-3713 0 1 0
chr2:216674077|216674241 hsa-miR-3713 0 1 0
chr13:45340734|45341115 hsa-miR-3713 0 1 0
chr1:28531904|28531990 hsa-miR-3713 0 1 0
chr2:101050475|101050595 hsa-miR-3713 0 1 0
chr13:22040997|22041123 hsa-miR-3713 0 1 0
chr20:18315452|18315600 hsa-miR-3713 0 1 0
chr1:26446316|26447660 hsa-miR-3713 0 1 0
chr17:7577569|7577870 hsa-miR-3713 0 1 0
chr20:35716740|35725155 hsa-miR-3713 0 1 0
chr16:30113340|30113535 hsa-miR-3713 0 1 0
chr2:216674077|216674306 hsa-miR-3713 0 1 0
chr12:53190066|53190260 hsa-miR-3713 0 1 0
chrX:121048126|121048225 hsa-miR-3713 0 1 0
chr13:45340737|45341077 hsa-miR-3713 0 1 0
chr22:37773930|37774036 hsa-miR-3713 0 1 0
chr17:7577569|7577892 hsa-miR-3713 0 1 0
chr13:45340712|45340876 hsa-miR-3713 0 1 0
chr22:37773932|37774041 hsa-miR-3713 0 1 0
chr10:15212802|15212947 hsa-miR-3713 0 1 0
chr1:156136549|156136799 hsa-miR-3713 -8 1 0
chr17:77499645|77499834 hsa-miR-3713 1 0 0
chr19:4430573|4430641 hsa-miR-3713 1 0 0
chrX:38805412|38805539 hsa-miR-3713 1 0 0
chr17:77499633|77499796 hsa-miR-3713 1 0 0
chr16:31040351|31040473 hsa-miR-3713 1 0 0
chrX:119469893|119469985 hsa-miR-3713 1 0 0
chr6:7580315|7580401 hsa-miR-3713 1 0 0
chr7:157267663|157267839 hsa-miR-3713 1 0 0
chr8:84555391|84555556 hsa-miR-3713 1 0 0
chr17:77499645|77499864 hsa-miR-3713 1 0 0
chr1:2307368|2307508 hsa-miR-3713 1 0 0
chr1:114720551|114720700 hsa-miR-3713 1 0 0
chr1:51789258|51789344 hsa-miR-3713 1 0 0
chr3:184331266|184331497 hsa-miR-3713 1 0 0
chr15:41394865|41395032 hsa-miR-3713 1 0 0
chr5:160487497|160487637 hsa-miR-3713 0 1 0
chr6:150249361|150249541 hsa-miR-3713 0 1 0
chr2:241690058|241690170 hsa-miR-3713 0 1 0
chrX:53431798|53432059 hsa-miR-3713 0 1 0
chr13:32536586|32536820 hsa-miR-3713 0 1 0
chr10:1017142|1017259 hsa-miR-3713 0 1 0
chr2:216674079|216674306 hsa-miR-3713 0 1 0
chr12:118417102|118417261 hsa-miR-3713 0 1 0
chr13:45340737|45341099 hsa-miR-3713 0 1 0
chr12:53190066|53190272 hsa-miR-3713 0 1 0
chr22:37773901|37774048 hsa-miR-3713 0 1 0
chr2:127862348|127862593 hsa-miR-3713 0 1 0
chr20:62656362|62656489 hsa-miR-3713 0 1 0
chr1:201332047|201332257 hsa-miR-3713 1 0 0
chr3:184331310|184331762 hsa-miR-3713 1 0 0
chr21:26837443|26837532 hsa-miR-3713 1 0 0
chr6:31616100|31616396 hsa-miR-3713 1 0 0
chr14:23275718|23275870 hsa-miR-3713 1 0 0
chr19:12792693|12792843 hsa-miR-3713 1 0 0
chr1:114720551|114720705 hsa-miR-3713 1 0 0
chr10:46010579|46010788 hsa-miR-3713 1 0 0
chr3:152836358|152836509 hsa-miR-3713 1 0 0
chr9:136848759|136848891 hsa-miR-3713 1 0 0
chr17:31531802|31531912 hsa-miR-3713 1 0 0
chr9:128724976|128725190 hsa-miR-3713 1 0 0
chr1:201332095|201332257 hsa-miR-3713 1 0 0
chr1:201332047|201332312 hsa-miR-3713 1 0 0
chr21:26837428|26837552 hsa-miR-3713 1 0 0
chrX:54182293|54182460 hsa-miR-3713 1 0 0
chr1:161291624|161291809 hsa-miR-3713 1 0 0
chr20:3785406|3785646 hsa-miR-3713 1 0 0
chr1:203308127|203308377 hsa-miR-3713 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-3713 SLFN12L schlafen family member 12 like HGNC:33920 details
hsa-miR-3713 CCNF cyclin F HGNC:1591 details
hsa-miR-3713 details
hsa-miR-3713 PCNP PEST proteolytic signal containing nuclear protein HGNC:30023 details
hsa-miR-3713 COLEC10 collectin subfamily member 10 HGNC:2220 details
hsa-miR-3713 OSBPL9 oxysterol binding protein like 9 HGNC:16386 details
hsa-miR-3713 TMCC1 transmembrane and coiled-coil domain family 1 HGNC:29116 details
hsa-miR-3713 TRMT5 tRNA methyltransferase 5 HGNC:23141 details
hsa-miR-3713 TMEM30A transmembrane protein 30A HGNC:16667 details
hsa-miR-3713 HMGN2 high mobility group nucleosomal binding domain 2 HGNC:4986 details
hsa-miR-3713 RFWD3 ring finger and WD repeat domain 3 HGNC:25539 details
hsa-miR-3713 C2orf72 chromosome 2 open reading frame 72 HGNC:27418 details
hsa-miR-3713 LYRM7 LYR motif containing 7 HGNC:28072 details
hsa-miR-3713 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils HGNC:29383 details
hsa-miR-3713 details
hsa-miR-3713 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 HGNC:7432 details
hsa-miR-3713 ZDHHC5 zinc finger DHHC-type palmitoyltransferase 5 HGNC:18472 details
hsa-miR-3713 NOX5 NADPH oxidase 5 HGNC:14874 details
hsa-miR-3713 RNF222 ring finger protein 222 HGNC:34517 details
hsa-miR-3713 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 HGNC:6968 details
hsa-miR-3713 UHMK1 U2AF homology motif kinase 1 HGNC:19683 details
hsa-miR-3713 ZNF747 zinc finger protein 747 HGNC:28350 details
hsa-miR-3713 ICOSLG inducible T cell costimulator ligand HGNC:17087 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab