miRNA Card

miRNA General Information
miRNA ID hsa-miR-376a-2-5p
Description Homo sapiens miR-376a-2 stem-loop
Comment The mature miR-376a products have been shown to be modified by A to I edits [2].
Experiment SOLiD [4]
Sequence GGUAGAUUUUCCUUCUAUGGU
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr13:77011944|77012128 hsa-miR-376a-2-5p 0 1 0
chr3:194357225|194357355 hsa-miR-376a-2-5p 0 1 0
chr3:194357225|194357354 hsa-miR-376a-2-5p 0 1 0
chr8:56217784|56217915 hsa-miR-376a-2-5p 0 1 0
chr1:109345793|109345873 hsa-miR-376a-2-5p 0 1 0
chr3:194357225|194357356 hsa-miR-376a-2-5p 0 1 0
chr1:102978708|102978913 hsa-miR-376a-2-5p 0 1 0
chr11:70435597|70435897 hsa-miR-376a-2-5p 0 1 0
chr11:70435659|70435883 hsa-miR-376a-2-5p 0 1 0
chr3:194357225|194357357 hsa-miR-376a-2-5p 0 1 0
chr13:77098585|77098710 hsa-miR-376a-2-5p 0 1 0
chr4:38944005|38944163 hsa-miR-376a-2-5p 0 1 0
chr14:94450493|94461819 hsa-miR-376a-2-5p 0 1 0
chr3:141944852|141944955 hsa-miR-376a-2-5p 0 1 0
chr11:57600230|57600367 hsa-miR-376a-2-5p 0 1 0
chr6:75915432|75915574 hsa-miR-376a-2-5p 0 1 0
chr11:62518414|62518566 hsa-miR-376a-2-5p 0 1 0
chr13:39049251|39049382 hsa-miR-376a-2-5p 0 1 0
chr16:2176852|2176996 hsa-miR-376a-2-5p 0 1 0
chr8:56217784|56217904 hsa-miR-376a-2-5p 0 1 0
chr11:57600152|57600367 hsa-miR-376a-2-5p 0 1 0
chr12:56099955|56100245 hsa-miR-376a-2-5p 0 1 0
chr12:13081138|13081380 hsa-miR-376a-2-5p 0 1 0
chr11:57600176|57600367 hsa-miR-376a-2-5p 0 1 0
chr13:113823375|113823475 hsa-miR-376a-2-5p 0 1 0
chr11:10802049|10802209 hsa-miR-376a-2-5p 0 1 0
chr12:56099923|56100245 hsa-miR-376a-2-5p 0 1 0
chr1:25499960|25500095 hsa-miR-376a-2-5p 0 1 0
chr1:2363897|2364050 hsa-miR-376a-2-5p 0 1 0
chr1:203798495|203798608 hsa-miR-376a-2-5p 0 1 0
chr10:73812977|73813083 hsa-miR-376a-2-5p 0 1 0
chr4:75655095|75655199 hsa-miR-376a-2-5p 0 1 0
chr8:56217784~56217904 hsa-miR-376a-2-5p 0 1 0
chr20:1308909~1309061 hsa-miR-376a-2-5p 0 1 0
chr4:76160179~76160332 hsa-miR-376a-2-5p 0 1 0
chr11:57600245~57600367 hsa-miR-376a-2-5p 0 1 0
chr14:94450493~94461819 hsa-miR-376a-2-5p 0 1 0
chr1:102978708~102978913 hsa-miR-376a-2-5p 0 1 0
chr2:27356277~27356401 hsa-miR-376a-2-5p 0 1 0
chr6:75915432~75915574 hsa-miR-376a-2-5p 0 1 0
chr11:57600230~57600367 hsa-miR-376a-2-5p 0 1 0
chr3:194357225~194357354 hsa-miR-376a-2-5p 0 1 0
chr11:10802049~10802209 hsa-miR-376a-2-5p 0 1 0
chr3:194357225~194357355 hsa-miR-376a-2-5p 0 1 0
chr1:109345793~109345873 hsa-miR-376a-2-5p 0 1 0
chr11:70435597~70435851 hsa-miR-376a-2-5p 0 1 0
chr14:23325847~23325964 hsa-miR-376a-2-5p 0 1 0
chr3:174684897|174685010 hsa-miR-376a-2-5p 0 1 0
chr3:12564726|12564878 hsa-miR-376a-2-5p 0 1 0
chr16:118907|119045 hsa-miR-376a-2-5p 0 1 0
chr1:174019850|174019961 hsa-miR-376a-2-5p 0 1 0
chrX:130079831|130079944 hsa-miR-376a-2-5p 0 1 0
chr5:72219593|72219707 hsa-miR-376a-2-5p 0 1 0
chr17:2995046|2995182 hsa-miR-376a-2-5p 0 1 0
chr8:18014725|18025429 hsa-miR-376a-2-5p 0 1 0
chr5:126472992|126473141 hsa-miR-376a-2-5p 0 1 0
chr14:50723777|50723945 hsa-miR-376a-2-5p 0 1 0
chr6:108627484|108627555 hsa-miR-376a-2-5p 0 1 0
chr1:9727651|9727798 hsa-miR-376a-2-5p 0 1 0
chr16:118907|119025 hsa-miR-376a-2-5p 0 1 0
chr2:38362512|38362666 hsa-miR-376a-2-5p 0 1 0
chr12:110449611|110449779 hsa-miR-376a-2-5p 0 1 0
chr10:42781300|42781453 hsa-miR-376a-2-5p 1 0 0
chr9:124889242|124889522 hsa-miR-376a-2-5p 1 0 0
chr9:124889226|124889522 hsa-miR-376a-2-5p 1 0 0
chr20:1308860|1309061 hsa-miR-376a-2-5p 0 1 0
chr20:51337241|51337488 hsa-miR-376a-2-5p 0 1 0
chr11:10801747|10802337 hsa-miR-376a-2-5p 0 1 0
chr17:40279491|40279591 hsa-miR-376a-2-5p 0 1 0
chr2:197494819|197494912 hsa-miR-376a-2-5p 0 1 0
chr14:23069760|23069878 hsa-miR-376a-2-5p 0 1 0
chr11:57600245|57600367 hsa-miR-376a-2-5p 0 1 0
chr11:134477475|134477632 hsa-miR-376a-2-5p 0 1 0
chr2:230875688|230875798 hsa-miR-376a-2-5p 0 1 0
chr11:10802086|10802209 hsa-miR-376a-2-5p 0 1 0
chr4:75655095|75655205 hsa-miR-376a-2-5p 0 1 0
chr11:62518400|62518566 hsa-miR-376a-2-5p 0 1 0
chr2:160099881|160100037 hsa-miR-376a-2-5p 0 1 0
chr3:38009053|38009323 hsa-miR-376a-2-5p 0 1 0
chr1:32685244|32685418 hsa-miR-376a-2-5p 0 1 0
chr7:27458637|27458832 hsa-miR-376a-2-5p 0 1 0
chr8:56217809|56217915 hsa-miR-376a-2-5p 0 1 0
chr4:76160179|76160332 hsa-miR-376a-2-5p 0 1 0
chr8:56217814|56217924 hsa-miR-376a-2-5p 0 1 0
chr8:56217809|56217885 hsa-miR-376a-2-5p 0 1 0
chr11:10802049|10802323 hsa-miR-376a-2-5p 0 1 0
chr5:459514|459691 hsa-miR-376a-2-5p 0 1 0
chr2:201284826|201285011 hsa-miR-376a-2-5p 0 1 0
chr11:70435683|70435849 hsa-miR-376a-2-5p 0 1 0
chr11:62518385|62518566 hsa-miR-376a-2-5p 0 1 0
chr8:56217801|56217908 hsa-miR-376a-2-5p 0 1 0
chr8:56217801|56217915 hsa-miR-376a-2-5p 0 1 0
chr1:52347891|52348036 hsa-miR-376a-2-5p 0 1 0
chr11:77611497|77611653 hsa-miR-376a-2-5p 0 1 0
chr7:151411731|151412017 hsa-miR-376a-2-5p 0 1 0
chr11:800199|800440 hsa-miR-376a-2-5p 0 1 0
chr16:15602088|15602203 hsa-miR-376a-2-5p 0 1 0
chr12:115972078|115972266 hsa-miR-376a-2-5p 0 1 0
chr17:8048749|8048930 hsa-miR-376a-2-5p 0 1 0
chr1:51789922|51790047 hsa-miR-376a-2-5p -9 1 0
chr10:73812977|73813172 hsa-miR-376a-2-5p -3 1 0
chr8:56217765|56217915 hsa-miR-376a-2-5p 0 1 0
chr11:10802049|10802185 hsa-miR-376a-2-5p 0 1 0
chr1:201997974|201998112 hsa-miR-376a-2-5p 0 1 0
chr7:101004659|101004907 hsa-miR-376a-2-5p 0 1 0
chr10:73812977|73813145 hsa-miR-376a-2-5p 0 1 0
chr7:101005035|101005118 hsa-miR-376a-2-5p 0 1 0
chr8:56217809|56217904 hsa-miR-376a-2-5p 0 1 0
chr11:57600243|57600367 hsa-miR-376a-2-5p 0 1 0
chr8:56217779|56217904 hsa-miR-376a-2-5p 0 1 0
chr11:10802049|10802182 hsa-miR-376a-2-5p 0 1 0
chr8:56217797|56217915 hsa-miR-376a-2-5p 0 1 0
chr7:101003436|101003587 hsa-miR-376a-2-5p 0 1 0
chr1:201866862|201866943 hsa-miR-376a-2-5p 0 1 0
chr12:14641197|14643708 hsa-miR-376a-2-5p 0 1 0
chr9:127941182|127941342 hsa-miR-376a-2-5p 0 1 0
chr10:73812977|73813128 hsa-miR-376a-2-5p 0 1 0
chr17:28619692|28619894 hsa-miR-376a-2-5p 0 1 0
chr1:201866815|201866924 hsa-miR-376a-2-5p 0 1 0
chr4:139717180|139717289 hsa-miR-376a-2-5p 0 1 0
chr9:97600361|97600520 hsa-miR-376a-2-5p 0 1 0
chr1:109690454|109715042 hsa-miR-376a-2-5p 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-376a-2-5p TBX18 T-box transcription factor 18 HGNC:11595 details
hsa-miR-376a-2-5p RPUSD2 RNA pseudouridine synthase domain containing 2 HGNC:24180 details
hsa-miR-376a-2-5p SLC16A1 solute carrier family 16 member 1 HGNC:10922 details
hsa-miR-376a-2-5p RAB30 RAB30, member RAS oncogene family HGNC:9770 details
hsa-miR-376a-2-5p PTPRJ protein tyrosine phosphatase receptor type J HGNC:9673 details
hsa-miR-376a-2-5p PPP1R15B protein phosphatase 1 regulatory subunit 15B HGNC:14951 details
hsa-miR-376a-2-5p GOLGA8B golgin A8 family member B HGNC:31973 details
hsa-miR-376a-2-5p EFHD2 EF-hand domain family member D2 HGNC:28670 details
hsa-miR-376a-2-5p ARL5B ADP ribosylation factor like GTPase 5B HGNC:23052 details
hsa-miR-376a-2-5p MDFIC MyoD family inhibitor domain containing HGNC:28870 details
hsa-miR-376a-2-5p ZCCHC3 zinc finger CCHC-type containing 3 HGNC:16230 details
hsa-miR-376a-2-5p KPNA5 karyopherin subunit alpha 5 HGNC:6398 details
hsa-miR-376a-2-5p NUP54 nucleoporin 54 HGNC:17359 details
hsa-miR-376a-2-5p E2F7 E2F transcription factor 7 HGNC:23820 details
hsa-miR-376a-2-5p CREBRF CREB3 regulatory factor HGNC:24050 details
hsa-miR-376a-2-5p COIL coilin HGNC:2184 details
hsa-miR-376a-2-5p MGAT4A alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A HGNC:7047 details
hsa-miR-376a-2-5p ZNF805 zinc finger protein 805 HGNC:23272 details
hsa-miR-376a-2-5p ZNF512B zinc finger protein 512B HGNC:29212 details
hsa-miR-376a-2-5p SPA17 sperm autoantigenic protein 17 HGNC:11210 details
hsa-miR-376a-2-5p SRPK1 SRSF protein kinase 1 HGNC:11305 details
hsa-miR-376a-2-5p NUDT21 nudix hydrolase 21 HGNC:13870 details
hsa-miR-376a-2-5p DDAH1 dimethylarginine dimethylaminohydrolase 1 HGNC:2715 details
hsa-miR-376a-2-5p UBXN2B UBX domain protein 2B HGNC:27035 details
hsa-miR-376a-2-5p SRSF11 serine and arginine rich splicing factor 11 HGNC:10782 details
hsa-miR-376a-2-5p TXLNG taxilin gamma HGNC:18578 details
hsa-miR-376a-2-5p EIF1AX eukaryotic translation initiation factor 1A X-linked HGNC:3250 details
hsa-miR-376a-2-5p CBX5 chromobox 5 HGNC:1555 details
hsa-miR-376a-2-5p USP38 ubiquitin specific peptidase 38 HGNC:20067 details
hsa-miR-376a-2-5p TVP23C trans-golgi network vesicle protein 23 homolog C HGNC:30453 details
hsa-miR-376a-2-5p SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 HGNC:11109 details
hsa-miR-376a-2-5p PCDH11Y protocadherin 11 Y-linked HGNC:15813 details
hsa-miR-376a-2-5p CLIP1 CAP-Gly domain containing linker protein 1 HGNC:10461 details
hsa-miR-376a-2-5p BAG4 BAG cochaperone 4 HGNC:940 details
hsa-miR-376a-2-5p LLPH LLP homolog, long-term synaptic facilitation factor HGNC:28229 details
hsa-miR-376a-2-5p ZNF322P1 zinc finger protein 322 pseudogene 1 HGNC:14003 details
hsa-miR-376a-2-5p SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit HGNC:11465 details
hsa-miR-376a-2-5p BACH1 BTB domain and CNC homolog 1 HGNC:935 details
hsa-miR-376a-2-5p PCDH11X protocadherin 11 X-linked HGNC:8656 details
hsa-miR-376a-2-5p TUBD1 tubulin delta 1 HGNC:16811 details
hsa-miR-376a-2-5p SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 HGNC:21368 details
hsa-miR-376a-2-5p SRSF2 serine and arginine rich splicing factor 2 HGNC:10783 details
hsa-miR-376a-2-5p RNF115 ring finger protein 115 HGNC:18154 details
hsa-miR-376a-2-5p FAM102B family with sequence similarity 102 member B HGNC:27637 details
hsa-miR-376a-2-5p CHD9 chromodomain helicase DNA binding protein 9 HGNC:25701 details
hsa-miR-376a-2-5p STAM signal transducing adaptor molecule HGNC:11357 details
hsa-miR-376a-2-5p NUP50 nucleoporin 50 HGNC:8065 details
hsa-miR-376a-2-5p LHFPL6 LHFPL tetraspan subfamily member 6 HGNC:6586 details
hsa-miR-376a-2-5p PARN poly(A)-specific ribonuclease HGNC:8609 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab