miRNA Card

miRNA General Information
miRNA ID hsa-miR-3975
Description Homo sapiens miR-3975 stem-loop
Comment None
Experiment Illumina [1]
Sequence UGAGGCUAAUGCACUACUUCAC
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr2:216675791|216676156 hsa-miR-3975 1 0 0
chr18:35677591|35677688 hsa-miR-3975 1 0 0
chr14:22900917|22901085 hsa-miR-3975 1 0 0
chr19:46839465|46839578 hsa-miR-3975 0 1 0
chr16:30710794|30711079 hsa-miR-3975 0 1 0
chr3:172374740|172374891 hsa-miR-3975 0 1 0
chr14:94614532|94614646 hsa-miR-3975 0 1 0
chr20:10412728|10412925 hsa-miR-3975 0 1 0
chr10:124045885|124046027 hsa-miR-3975 0 1 0
chr1:32772899|32773218 hsa-miR-3975 0 1 0
chr14:94614546|94614726 hsa-miR-3975 0 1 0
chr16:74452195|74452400 hsa-miR-3975 0 1 0
chr2:237877224|237877362 hsa-miR-3975 0 1 0
chr1:205879692|205879825 hsa-miR-3975 0 1 0
chr17:39566887|39567026 hsa-miR-3975 0 1 0
chr12:6769618|6769999 hsa-miR-3975 0 1 0
chr7:99420133|99420238 hsa-miR-3975 0 1 0
chr19:19121109|19121406 hsa-miR-3975 0 1 0
chr8:10428630|10428785 hsa-miR-3975 0 1 0
chr9:131198022|131198213 hsa-miR-3975 0 1 0
chr12:118145276|118145387 hsa-miR-3975 0 1 0
chr19:38383421|38383622 hsa-miR-3975 0 1 0
chr1:201874288|201874372 hsa-miR-3975 0 1 0
chr5:177306601|177306812 hsa-miR-3975 0 1 0
chr9:131198065|131198213 hsa-miR-3975 0 1 0
chr17:50186473|50186691 hsa-miR-3975 0 1 0
chr6:28283778|28283994 hsa-miR-3975 0 1 0
chr11:61514157|61514342 hsa-miR-3975 0 1 0
chr6:135054649|135054796 hsa-miR-3975 0 1 0
chr5:132486251|132486612 hsa-miR-3975 0 1 0
chr17:63820255|63820422 hsa-miR-3975 1 0 0
chr20:43201692|43201862 hsa-miR-3975 1 0 0
chr17:4535568|4535772 hsa-miR-3975 1 0 0
chr12:52517590|52517959 hsa-miR-3975 1 0 0
chr1:30733143|30733253 hsa-miR-3975 1 0 0
chr4:775212|775347 hsa-miR-3975 1 0 0
chr19:7901545|7901670 hsa-miR-3975 1 0 0
chr2:202035650|202035876 hsa-miR-3975 1 0 0
chr9:130233844|130234100 hsa-miR-3975 1 0 0
chr13:37563108|37563197 hsa-miR-3975 0 1 0
chr22:35740036|35740198 hsa-miR-3975 0 1 0
chr1:23962409|23962627 hsa-miR-3975 0 1 0
chr1:32334583|32334745 hsa-miR-3975 0 1 0
chr14:94614562|94614689 hsa-miR-3975 0 1 0
chr17:7224519|7224697 hsa-miR-3975 0 1 0
chr11:119045781|119046618 hsa-miR-3975 0 1 0
chr12:12913234|12913320 hsa-miR-3975 0 1 0
chr9:121785132|121785217 hsa-miR-3975 0 1 0
chr12:12475870|12476158 hsa-miR-3975 0 1 0
chr17:50186415|50186670 hsa-miR-3975 0 1 0
chr11:33705372|33705662 hsa-miR-3975 0 1 0
chr17:7224480|7224703 hsa-miR-3975 0 1 0
chrX:119663482|119663608 hsa-miR-3975 0 1 0
chr17:38707511|38707872 hsa-miR-3975 0 1 0
chr1:230873897|230874018 hsa-miR-3975 0 1 0
chr12:53480624|53480756 hsa-miR-3975 0 1 0
chr1:54205049|54205195 hsa-miR-3975 0 1 0
chr7:21894806|21894999 hsa-miR-3975 0 1 0
chr12:74540872|74541047 hsa-miR-3975 0 1 0
chr16:71732739|71732932 hsa-miR-3975 0 1 0
chr2:201167580|201167796 hsa-miR-3975 0 1 0
chr3:131024280|131024397 hsa-miR-3975 0 1 0
chr11:57309179|57309485 hsa-miR-3975 0 1 0
chrX:56279617|56279715 hsa-miR-3975 0 1 0
chr9:121785055|121785217 hsa-miR-3975 0 1 0
chr1:32334583|32334728 hsa-miR-3975 0 1 0
chr12:6769621|6769999 hsa-miR-3975 0 1 0
chr17:7224354|7224700 hsa-miR-3975 0 1 0
chr14:94614556|94614689 hsa-miR-3975 0 1 0
chr13:37563140~37563284 hsa-miR-3975 0 1 0
chr19:46839465~46839578 hsa-miR-3975 0 1 0
chr12:6769627~6769999 hsa-miR-3975 0 1 0
chr10:252363~252521 hsa-miR-3975 0 1 0
chr16:74452197~74452416 hsa-miR-3975 0 1 0
chr5:14713044~14713167 hsa-miR-3975 0 1 0
chr7:135734000~135734091 hsa-miR-3975 0 1 0
chr19:51642640~51642808 hsa-miR-3975 0 1 0
chr13:36831995~36832110 hsa-miR-3975 0 1 0
chr17:50479953~50480065 hsa-miR-3975 0 1 0
chr1:32772899~32773218 hsa-miR-3975 0 1 0
chr5:132486251~132486612 hsa-miR-3975 0 1 0
chr17:50186415~50186670 hsa-miR-3975 0 1 0
chr17:75005468~75005653 hsa-miR-3975 0 1 0
chr19:49497917~49498031 hsa-miR-3975 0 1 0
chr2:202035650~202035876 hsa-miR-3975 0 1 0
chr2:130345863~130346112 hsa-miR-3975 0 1 0
chr17:50186429~50186670 hsa-miR-3975 0 1 0
chr7:117278264~117278366 hsa-miR-3975 0 1 0
chr1:32334583~32334800 hsa-miR-3975 0 1 0
chr6:35088886~35089052 hsa-miR-3975 0 1 0
chr7:45716827~45716959 hsa-miR-3975 0 1 0
chr9:133341562~133341825 hsa-miR-3975 0 1 0
chr20:10412720~10412940 hsa-miR-3975 0 1 0
chr9:120904730~120904810 hsa-miR-3975 0 1 0
chr5:76732961~76733065 hsa-miR-3975 0 1 0
chr5:173569473~173569633 hsa-miR-3975 0 1 0
chr3:142306646~142306752 hsa-miR-3975 0 1 0
chr22:31577642~31577819 hsa-miR-3975 0 1 0
chr2:20203991~20204236 hsa-miR-3975 0 1 0
chr9:5968019|5988545 hsa-miR-3975 1 0 0
chr16:24112999|24123861 hsa-miR-3975 0 1 0
chr20:56414576|56414775 hsa-miR-3975 0 1 0
chr1:109626872|109627248 hsa-miR-3975 0 1 0
chr9:121146117|121146256 hsa-miR-3975 0 1 0
chr10:35532466|35532642 hsa-miR-3975 0 1 0
chr18:36771575|36771695 hsa-miR-3975 0 1 0
chrX:130079831|130079944 hsa-miR-3975 0 1 0
chr3:49024366|49024720 hsa-miR-3975 0 1 0
chr12:6769639|6769999 hsa-miR-3975 0 1 0
chr3:160426093|160426200 hsa-miR-3975 0 1 0
chr12:104607441|104607547 hsa-miR-3975 0 1 0
chr3:52840937|52841099 hsa-miR-3975 0 1 0
chr17:77436635|77436794 hsa-miR-3975 0 1 0
chr2:241229640|241229941 hsa-miR-3975 0 1 0
chr7:98259563|98259834 hsa-miR-3975 0 1 0
chr22:24142589|24142877 hsa-miR-3975 0 1 0
chr19:45473971|45474160 hsa-miR-3975 1 0 0
chr1:86746000|86746178 hsa-miR-3975 1 0 0
chr4:107911953|107912121 hsa-miR-3975 1 0 0
chr22:36293329|36293418 hsa-miR-3975 0 1 0
chr2:119980114|119980377 hsa-miR-3975 0 1 0
chr8:143816532|143816765 hsa-miR-3975 0 1 0
chr8:79918944|79919088 hsa-miR-3975 0 1 0
chr1:32334583|32334815 hsa-miR-3975 0 1 0
chr17:44401207|44401448 hsa-miR-3975 0 1 0
chr3:39335743|39335883 hsa-miR-3975 0 1 0
chr17:7224480|7224700 hsa-miR-3975 0 1 0
chr6:33674243|33675856 hsa-miR-3975 0 1 0
chr2:171555668|171555862 hsa-miR-3975 0 1 0
chr6:143941956|143942144 hsa-miR-3975 0 1 0
chr1:32772930|32773180 hsa-miR-3975 0 1 0
chr1:32334583|32334866 hsa-miR-3975 0 1 0
chr11:68121783|68121964 hsa-miR-3975 0 1 0
chr18:9559482|9559594 hsa-miR-3975 0 1 0
chr10:124045885|124046017 hsa-miR-3975 0 1 0
chr7:17940284|17940443 hsa-miR-3975 0 1 0
chr16:74452197|74452410 hsa-miR-3975 0 1 0
chr2:176337544|176337687 hsa-miR-3975 0 1 0
chr16:75656303|75656468 hsa-miR-3975 0 1 0
chr17:43143665|43143779 hsa-miR-3975 0 1 0
chr17:81511229|81511416 hsa-miR-3975 0 1 0
chr2:20204128|20204241 hsa-miR-3975 0 1 0
chr2:171555746|171555862 hsa-miR-3975 0 1 0
chr1:153645402|153645585 hsa-miR-3975 0 1 0
chr22:35740036|35740245 hsa-miR-3975 0 1 0
chr11:65121563|65121780 hsa-miR-3975 0 1 0
chr11:33705372|33705644 hsa-miR-3975 0 1 0
chr9:35738332|35738599 hsa-miR-3975 0 1 0
chr17:7224519|7224700 hsa-miR-3975 0 1 0
chr16:68813319|68813398 hsa-miR-3975 0 1 0
chr8:143816530|143816692 hsa-miR-3975 0 1 0
chr2:241229841|241230191 hsa-miR-3975 0 1 0
chr20:63863500|63863642 hsa-miR-3975 0 1 0
chr1:32334583|32334803 hsa-miR-3975 0 1 0
chr11:118000279|118000469 hsa-miR-3975 0 1 0
chr22:38731710|38731824 hsa-miR-3975 0 1 0
chr3:63833918|63834179 hsa-miR-3975 0 1 0
chr17:7224519|7224703 hsa-miR-3975 0 1 0
chr9:124949045|124949216 hsa-miR-3975 0 1 0
chr11:95132096|95132249 hsa-miR-3975 0 1 0
chr1:32772979|32773189 hsa-miR-3975 0 1 0
chr12:118145161|118145387 hsa-miR-3975 0 1 0
chr19:37362909|37363244 hsa-miR-3975 0 1 0
chr22:36506035|36506191 hsa-miR-3975 0 1 0
chr10:101610805|101610984 hsa-miR-3975 0 1 0
chr17:7224498|7224700 hsa-miR-3975 0 1 0
chr8:73363664|73363783 hsa-miR-3975 0 1 0
chr5:132486279|132486669 hsa-miR-3975 0 1 0
chr1:52360101|52360231 hsa-miR-3975 0 1 0
chr15:40853781|40853887 hsa-miR-3975 0 1 0
chr9:121785037|121785217 hsa-miR-3975 -3 1 0
chr1:32334583|32334817 hsa-miR-3975 -8 1 0
chr19:51642702|51642808 hsa-miR-3975 -13 1 0
chr17:7224525|7224697 hsa-miR-3975 -9 1 0
chr1:32334583|32334851 hsa-miR-3975 -8 1 0
chr19:1393256|1393330 hsa-miR-3975 0 1 0
chr15:40853776|40853887 hsa-miR-3975 0 1 0
chrX:110195060|110195194 hsa-miR-3975 1 0 0
chr3:186677072|186677251 hsa-miR-3975 1 0 0
chr3:186677059|186677200 hsa-miR-3975 1 0 0
chr20:44431310|44431462 hsa-miR-3975 1 0 0
chr16:58707224|58707342 hsa-miR-3975 1 0 0
chr17:7224480|7224697 hsa-miR-3975 0 1 0
chr7:27188531|27188683 hsa-miR-3975 0 1 0
chr16:71732739|71732929 hsa-miR-3975 0 1 0
chr15:80754560|80754678 hsa-miR-3975 0 1 0
chr1:151144745|151144898 hsa-miR-3975 0 1 0
chr10:73814043|73814225 hsa-miR-3975 0 1 0
chr17:81328798|81328934 hsa-miR-3975 0 1 0
chr14:24240774|24241072 hsa-miR-3975 0 1 0
chr12:109087282|109087383 hsa-miR-3975 0 1 0
chr1:145993673|145993865 hsa-miR-3975 0 1 0
chr11:72229165|72229558 hsa-miR-3975 0 1 0
chr12:6769603|6769999 hsa-miR-3975 0 1 0
chr16:548204|548287 hsa-miR-3975 0 1 0
chr17:50186429|50186680 hsa-miR-3975 0 1 0
chr11:57309388|57309485 hsa-miR-3975 0 1 0
chr17:7224484|7224874 hsa-miR-3975 0 1 0
chr5:111728386|111728560 hsa-miR-3975 0 1 0
chr7:102283292|102283515 hsa-miR-3975 0 1 0
chr20:17942033|17942303 hsa-miR-3975 0 1 0
chr17:39918278|39918466 hsa-miR-3975 0 1 0
chr12:56765828|56766144 hsa-miR-3975 0 1 0
chr14:94614546|94614689 hsa-miR-3975 0 1 0
chr12:6769636|6769999 hsa-miR-3975 0 1 0
chr22:31616335|31616696 hsa-miR-3975 0 1 0
chr16:75395090|75395209 hsa-miR-3975 0 1 0
chr17:50185973|50186680 hsa-miR-3975 0 1 0
chr16:87831949|87832071 hsa-miR-3975 0 1 0
chr17:50186429|50186670 hsa-miR-3975 0 1 0
chr14:96976666|96976806 hsa-miR-3975 0 1 0
chr12:6769624|6770218 hsa-miR-3975 0 1 0
chr12:132825952|132826089 hsa-miR-3975 0 1 0
chr2:20203991|20204170 hsa-miR-3975 0 1 0
chr10:124045885|124046011 hsa-miR-3975 0 1 0
chr1:153645402|153645695 hsa-miR-3975 0 1 0
chr11:119045793|119046586 hsa-miR-3975 0 1 0
chr11:65121507|65121778 hsa-miR-3975 0 1 0
chr5:133103967|133104287 hsa-miR-3975 0 1 0
chr9:125438799|125438937 hsa-miR-3975 0 1 0
chr17:75061580|75061731 hsa-miR-3975 1 0 0
chr12:52517659|52517959 hsa-miR-3975 1 0 0
chr12:52517659|52517965 hsa-miR-3975 1 0 0
chr12:52517897|52518156 hsa-miR-3975 1 0 0
chr12:52517648|52517965 hsa-miR-3975 1 0 0
chr3:193696054|193696332 hsa-miR-3975 1 0 0
chr2:226998685|226998977 hsa-miR-3975 1 0 0
chr12:52517659|52518126 hsa-miR-3975 1 0 0
chr20:52084157|52084491 hsa-miR-3975 1 0 0
chr9:74288891|74289169 hsa-miR-3975 1 0 0
chr12:52517590|52517965 hsa-miR-3975 1 0 0
chr3:124968246|124968441 hsa-miR-3975 1 0 0
chr12:56005045|56005098 hsa-miR-3975 1 0 0
chr12:52517609|52517965 hsa-miR-3975 1 0 0
chr16:74305428|74305580 hsa-miR-3975 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-3975 SSH3 slingshot protein phosphatase 3 HGNC:30581 details
hsa-miR-3975 GAGE1 G antigen 1 HGNC:4098 details
hsa-miR-3975 POFUT1 protein O-fucosyltransferase 1 HGNC:14988 details
hsa-miR-3975 ZNF439 zinc finger protein 439 HGNC:20873 details
hsa-miR-3975 PLEKHG4B pleckstrin homology and RhoGEF domain containing G4B HGNC:29399 details
hsa-miR-3975 ZNF774 zinc finger protein 774 HGNC:33108 details
hsa-miR-3975 RIMS4 regulating synaptic membrane exocytosis 4 HGNC:16183 details
hsa-miR-3975 CKS1B CDC28 protein kinase regulatory subunit 1B HGNC:19083 details
hsa-miR-3975 ALX1 ALX homeobox 1 HGNC:1494 details
hsa-miR-3975 KIAA1191 KIAA1191 HGNC:29209 details
hsa-miR-3975 RFT1 RFT1 homolog HGNC:30220 details
hsa-miR-3975 TMEM19 transmembrane protein 19 HGNC:25605 details
hsa-miR-3975 EGF epidermal growth factor HGNC:3229 details
hsa-miR-3975 URM1 ubiquitin related modifier 1 HGNC:28378 details
hsa-miR-3975 TXNIP thioredoxin interacting protein HGNC:16952 details
hsa-miR-3975 TSR1 TSR1 ribosome maturation factor HGNC:25542 details
hsa-miR-3975 TMBIM6 transmembrane BAX inhibitor motif containing 6 HGNC:11723 details
hsa-miR-3975 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D HGNC:28759 details
hsa-miR-3975 SPOPL speckle type BTB/POZ protein like HGNC:27934 details
hsa-miR-3975 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 HGNC:11106 details
hsa-miR-3975 SLC39A9 solute carrier family 39 member 9 HGNC:20182 details
hsa-miR-3975 DVL3 dishevelled segment polarity protein 3 HGNC:3087 details
hsa-miR-3975 DDN dendrin HGNC:24458 details
hsa-miR-3975 CRY2 cryptochrome circadian regulator 2 HGNC:2385 details
hsa-miR-3975 CAND1 cullin associated and neddylation dissociated 1 HGNC:30688 details
hsa-miR-3975 ADM adrenomedullin HGNC:259 details
hsa-miR-3975 TMEM214 transmembrane protein 214 HGNC:25983 details
hsa-miR-3975 ACTG1 actin gamma 1 HGNC:144 details
hsa-miR-3975 CSNK2A1 casein kinase 2 alpha 1 HGNC:2457 details
hsa-miR-3975 PYCARD PYD and CARD domain containing HGNC:16608 details
hsa-miR-3975 ESPL1 extra spindle pole bodies like 1, separase HGNC:16856 details
hsa-miR-3975 ZNF81 zinc finger protein 81 HGNC:13156 details
hsa-miR-3975 TFCP2L1 transcription factor CP2 like 1 HGNC:17925 details
hsa-miR-3975 SLC24A4 solute carrier family 24 member 4 HGNC:10978 details
hsa-miR-3975 SIGLEC9 sialic acid binding Ig like lectin 9 HGNC:10878 details
hsa-miR-3975 KIAA0408 KIAA0408 HGNC:21636 details
hsa-miR-3975 DFFA DNA fragmentation factor subunit alpha HGNC:2772 details
hsa-miR-3975 CCNT1 cyclin T1 HGNC:1599 details
hsa-miR-3975 DNAH10OS dynein axonemal heavy chain 10 opposite strand HGNC:37121 details
hsa-miR-3975 DGAT2 diacylglycerol O-acyltransferase 2 HGNC:16940 details
hsa-miR-3975 ARHGDIA Rho GDP dissociation inhibitor alpha HGNC:678 details
hsa-miR-3975 TNFRSF10B TNF receptor superfamily member 10b HGNC:11905 details
hsa-miR-3975 ICAM1 intercellular adhesion molecule 1 HGNC:5344 details
hsa-miR-3975 PLCE1 phospholipase C epsilon 1 HGNC:17175 details
hsa-miR-3975 SNX9 sorting nexin 9 HGNC:14973 details
hsa-miR-3975 UBXN2B UBX domain protein 2B HGNC:27035 details
hsa-miR-3975 TMEM239 transmembrane protein 239 HGNC:40044 details
hsa-miR-3975 BAZ2A bromodomain adjacent to zinc finger domain 2A HGNC:962 details
hsa-miR-3975 GGCX gamma-glutamyl carboxylase HGNC:4247 details
hsa-miR-3975 RPH3AL rabphilin 3A like (without C2 domains) HGNC:10296 details
hsa-miR-3975 ARL5A ADP ribosylation factor like GTPase 5A HGNC:696 details
hsa-miR-3975 DSN1 DSN1 component of MIS12 kinetochore complex HGNC:16165 details
hsa-miR-3975 YIPF4 Yip1 domain family member 4 HGNC:28145 details
hsa-miR-3975 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 HGNC:16469 details
hsa-miR-3975 RHOF ras homolog family member F, filopodia associated HGNC:15703 details
hsa-miR-3975 RBMS2 RNA binding motif single stranded interacting protein 2 HGNC:9909 details
hsa-miR-3975 RFC2 replication factor C subunit 2 HGNC:9970 details
hsa-miR-3975 ZNF33A zinc finger protein 33A HGNC:13096 details
hsa-miR-3975 CD209 CD209 molecule HGNC:1641 details
hsa-miR-3975 LIN9 lin-9 DREAM MuvB core complex component HGNC:30830 details
hsa-miR-3975 PLLP plasmolipin HGNC:18553 details
hsa-miR-3975 WNK1 WNK lysine deficient protein kinase 1 HGNC:14540 details
hsa-miR-3975 HEXIM1 HEXIM P-TEFb complex subunit 1 HGNC:24953 details
hsa-miR-3975 ZBTB8A zinc finger and BTB domain containing 8A HGNC:24172 details
hsa-miR-3975 LMNB2 lamin B2 HGNC:6638 details
hsa-miR-3975 MSI2 musashi RNA binding protein 2 HGNC:18585 details
hsa-miR-3975 NFIC nuclear factor I C HGNC:7786 details
hsa-miR-3975 PRRC2B proline rich coiled-coil 2B HGNC:28121 details
hsa-miR-3975 RRAS RAS related HGNC:10447 details
hsa-miR-3975 SETD7 SET domain containing 7, histone lysine methyltransferase HGNC:30412 details
hsa-miR-3975 TOLLIP toll interacting protein HGNC:16476 details
hsa-miR-3975 WDTC1 WD and tetratricopeptide repeats 1 HGNC:29175 details
hsa-miR-3975 ZNF385A zinc finger protein 385A HGNC:17521 details
hsa-miR-3975 CLDN12 claudin 12 HGNC:2034 details
hsa-miR-3975 details
hsa-miR-3975 QSOX1 quiescin sulfhydryl oxidase 1 HGNC:9756 details
hsa-miR-3975 RMDN1 regulator of microtubule dynamics 1 HGNC:24285 details
hsa-miR-3975 SMU1 SMU1 DNA replication regulator and spliceosomal factor HGNC:18247 details
hsa-miR-3975 TIPIN TIMELESS interacting protein HGNC:30750 details
hsa-miR-3975 ZCCHC4 zinc finger CCHC-type containing 4 HGNC:22917 details
hsa-miR-3975 CEP126 centrosomal protein 126 HGNC:29264 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab