miRNA Card

miRNA General Information
miRNA ID hsa-miR-3977
Description Homo sapiens miR-3977 stem-loop
Comment None
Experiment Illumina [1]
Sequence GUGCUUCAUCGUAAUUAACCUUA
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr19:58085906|58086088 hsa-miR-3977 0 1 0
chr6:153282512|153282601 hsa-miR-3977 0 1 0
chr8:17644211|17644366 hsa-miR-3977 0 1 0
chr8:143923012|143923154 hsa-miR-3977 0 1 0
chr19:14150010|14150192 hsa-miR-3977 0 1 0
chr17:42779077|42779405 hsa-miR-3977 0 1 0
chr3:122426973|122427092 hsa-miR-3977 0 1 0
chr3:128637989|128638099 hsa-miR-3977 0 1 0
chr10:44374507|44374757 hsa-miR-3977 0 1 0
chr1:43619484|43619789 hsa-miR-3977 0 1 0
chr22:36805189|36805380 hsa-miR-3977 0 1 0
chr8:38421848|38421911 hsa-miR-3977 0 1 0
chr11:126292487|126292632 hsa-miR-3977 0 1 0
chr2:27132843|27133187 hsa-miR-3977 0 1 0
chr11:126292517|126292632 hsa-miR-3977 0 1 0
chr1:27306188|27306362 hsa-miR-3977 0 1 0
chr17:16439841|16439986 hsa-miR-3977 0 1 0
chr8:70111582|70111690 hsa-miR-3977 0 1 0
chr11:6410802|6410944 hsa-miR-3977 1 0 0
chr19:54123768|54123918 hsa-miR-3977 1 0 0
chr1:86742261|86742410 hsa-miR-3977 1 0 0
chr6:30494005|30494154 hsa-miR-3977 0 1 0
chr5:80436867|80437032 hsa-miR-3977 0 1 0
chr3:133589011|133589126 hsa-miR-3977 0 1 0
chr9:122984612|122984719 hsa-miR-3977 0 1 0
chr9:69218269|69220913 hsa-miR-3977 0 1 0
chr8:73322705|73322978 hsa-miR-3977 0 1 0
chr13:51374400|51374746 hsa-miR-3977 0 1 0
chr11:47239516|47239636 hsa-miR-3977 0 1 0
chr22:30663675|30663871 hsa-miR-3977 0 1 0
chr1:151342151|151342290 hsa-miR-3977 0 1 0
chr8:100703203|100703350 hsa-miR-3977 0 1 0
chr8:21998755|21999116 hsa-miR-3977 0 1 0
chr15:45676294|45682593 hsa-miR-3977 0 1 0
chr3:50350318|50350505 hsa-miR-3977 0 1 0
chr8:70111582|70111697 hsa-miR-3977 0 1 0
chr17:8146921|8147312 hsa-miR-3977 0 1 0
chr20:47663453|47663573 hsa-miR-3977 0 1 0
chr1:151365248|151365628 hsa-miR-3977 0 1 0
chr12:1592873|1593019 hsa-miR-3977 0 1 0
chr17:34991800|34992022 hsa-miR-3977 0 1 0
chr17:40264651|40264750 hsa-miR-3977 0 1 0
chr11:65535266|65535370 hsa-miR-3977 0 1 0
chr22:20997414|20997572 hsa-miR-3977 0 1 0
chr5:181237609|181238239 hsa-miR-3977 0 1 0
chr16:19463858|19464024 hsa-miR-3977 0 1 0
chr12:57695780|57696038 hsa-miR-3977 0 1 0
chr17:18271466|18271606 hsa-miR-3977 0 1 0
chr7:152121673|152121754 hsa-miR-3977 0 1 0
chr2:227536648|227536993 hsa-miR-3977 0 1 0
chr5:181238133|181238239 hsa-miR-3977 0 1 0
chr3:183867885|183868001 hsa-miR-3977 0 1 0
chr14:94062379|94062519 hsa-miR-3977 0 1 0
chr8:123253550|123253680 hsa-miR-3977 0 1 0
chr9:6720887|6720991 hsa-miR-3977 0 1 0
chr3:4818138|4818242 hsa-miR-3977 0 1 0
chr12:11894068|11894210 hsa-miR-3977 0 1 0
chr4:2514508|2514745 hsa-miR-3977 0 1 0
chr10:62095025|62095094 hsa-miR-3977 0 1 0
chr8:143992292|143992494 hsa-miR-3977 0 1 0
chr5:157794898~157805911 hsa-miR-3977 0 1 0
chr11:62839131~62839407 hsa-miR-3977 0 1 0
chr16:89281640~89281768 hsa-miR-3977 0 1 0
chr17:40134845~40135095 hsa-miR-3977 0 1 0
chr6:153282512~153282601 hsa-miR-3977 0 1 0
chr2:232682057~232682208 hsa-miR-3977 0 1 0
chr1:161218892~161219067 hsa-miR-3977 0 1 0
chr17:1575550~1575669 hsa-miR-3977 0 1 0
chr8:100703203~100703350 hsa-miR-3977 0 1 0
chr19:54123768~54123918 hsa-miR-3977 0 1 0
chr2:27132898~27133243 hsa-miR-3977 0 1 0
chr5:181238099~181238184 hsa-miR-3977 0 1 0
chr8:70111582~70111703 hsa-miR-3977 0 1 0
chr17:42779105~42779301 hsa-miR-3977 0 1 0
chr6:153282520~153282610 hsa-miR-3977 0 1 0
chr12:13217325~13217603 hsa-miR-3977 0 1 0
chr14:54509954~54510063 hsa-miR-3977 0 1 0
chr15:45676294~45682593 hsa-miR-3977 0 1 0
chr2:219183019|219183131 hsa-miR-3977 0 1 0
chr16:89281627~89281799 hsa-miR-3977 0 1 0
chr3:187075693~187075755 hsa-miR-3977 0 1 0
chr1:151342177~151342286 hsa-miR-3977 0 1 0
chr1:12012026~12012174 hsa-miR-3977 0 1 0
chr10:3113612|3113727 hsa-miR-3977 0 1 0
chr17:42779205|42779342 hsa-miR-3977 0 1 0
chr7:73477260|73477450 hsa-miR-3977 0 1 0
chr4:86928585|86928811 hsa-miR-3977 0 1 0
chr20:44506827|44509914 hsa-miR-3977 0 1 0
chr4:77051707|77051881 hsa-miR-3977 0 1 0
chr16:50313898|50314062 hsa-miR-3977 0 1 0
chr7:128596458|128596545 hsa-miR-3977 0 1 0
chr4:25828528|25828662 hsa-miR-3977 0 1 0
chr1:151342181|151342266 hsa-miR-3977 0 1 0
chr10:79195768|79195960 hsa-miR-3977 0 1 0
chr17:8146844|8147050 hsa-miR-3977 0 1 0
chr2:233286210|233286338 hsa-miR-3977 0 1 0
chr15:55237277|55237410 hsa-miR-3977 0 1 0
chr6:30494044|30494154 hsa-miR-3977 0 1 0
chr9:128169024|128169141 hsa-miR-3977 1 0 0
chr11:62596032|62596339 hsa-miR-3977 0 1 0
chr1:161172001|161172279 hsa-miR-3977 0 1 0
chr1:151342151|151342286 hsa-miR-3977 0 1 0
chr7:100200694|100200858 hsa-miR-3977 0 1 0
chr1:27306202|27306321 hsa-miR-3977 0 1 0
chr1:151342181|151342290 hsa-miR-3977 0 1 0
chr16:28974975|28975159 hsa-miR-3977 0 1 0
chr2:219182992|219183131 hsa-miR-3977 0 1 0
chr17:42779205|42779311 hsa-miR-3977 0 1 0
chr1:12012001|12012171 hsa-miR-3977 0 1 0
chr19:55279548|55279679 hsa-miR-3977 0 1 0
chr1:12012026|12012171 hsa-miR-3977 0 1 0
chr14:73219465|73219549 hsa-miR-3977 0 1 0
chr3:133588982|133589126 hsa-miR-3977 0 1 0
chr3:187075591|187075810 hsa-miR-3977 0 1 0
chr4:121696581|121696978 hsa-miR-3977 0 1 0
chr17:1575534|1575660 hsa-miR-3977 0 1 0
chr14:96242633|96242761 hsa-miR-3977 0 1 0
chr10:43386811|43386963 hsa-miR-3977 0 1 0
chr2:27132898|27133257 hsa-miR-3977 0 1 0
chr6:28904454|28904576 hsa-miR-3977 0 1 0
chr6:45328288|45328692 hsa-miR-3977 0 1 0
chr16:54306537|54306676 hsa-miR-3977 0 1 0
chr2:99337564|99360549 hsa-miR-3977 0 1 0
chr1:161218899|161219017 hsa-miR-3977 0 1 0
chr17:49702858|49703245 hsa-miR-3977 0 1 0
chr12:57695786|57696038 hsa-miR-3977 0 1 0
chr1:12012024|12012171 hsa-miR-3977 0 1 0
chr14:24172548|24172923 hsa-miR-3977 0 1 0
chr1:154589757|154589895 hsa-miR-3977 0 1 0
chr9:112874173|112874290 hsa-miR-3977 0 1 0
chr14:94380953|94381082 hsa-miR-3977 0 1 0
chr20:33988497|33988657 hsa-miR-3977 0 1 0
chr14:74292551|74292770 hsa-miR-3977 0 1 0
chr11:18283795|18285459 hsa-miR-3977 0 1 0
chr14:94380953|94381074 hsa-miR-3977 0 1 0
chr22:20997414|20997575 hsa-miR-3977 0 1 0
chr1:161172001|161172281 hsa-miR-3977 0 1 0
chr14:94380918|94381082 hsa-miR-3977 0 1 0
chr14:94380930|94381126 hsa-miR-3977 0 1 0
chr6:28904484|28904576 hsa-miR-3977 0 1 0
chr7:103270466|103270564 hsa-miR-3977 0 1 0
chr7:144255532|144255669 hsa-miR-3977 0 1 0
chr11:119132927|119133163 hsa-miR-3977 0 1 0
chr12:48826443|48826806 hsa-miR-3977 0 1 0
chr17:39557639|39557769 hsa-miR-3977 0 1 0
chr16:19463874|19464024 hsa-miR-3977 0 1 0
chr6:153282520|153282610 hsa-miR-3977 0 1 0
chr3:49121204|49121291 hsa-miR-3977 0 1 0
chr17:42779105|42779301 hsa-miR-3977 0 1 0
chr2:119442852|119443023 hsa-miR-3977 0 1 0
chr20:25675453|25675578 hsa-miR-3977 0 1 0
chr10:122429841|122429956 hsa-miR-3977 0 1 0
chr9:87708078|87708297 hsa-miR-3977 0 1 0
chr19:35497292|35497485 hsa-miR-3977 0 1 0
chr15:40393917|40394035 hsa-miR-3977 0 1 0
chr19:40944915|40945071 hsa-miR-3977 0 1 0
chr1:12012001|12012174 hsa-miR-3977 0 1 0
chr2:218474630|218474885 hsa-miR-3977 0 1 0
chr19:40809517|40809662 hsa-miR-3977 0 1 0
chr8:42361096|42361365 hsa-miR-3977 0 1 0
chr17:1575550|1575660 hsa-miR-3977 0 1 0
chr12:49039222|49039529 hsa-miR-3977 -4 1 0
chr14:96242637|96242761 hsa-miR-3977 -6 1 0
chr14:94380930|94381082 hsa-miR-3977 -8 1 0
chr1:12012024|12012174 hsa-miR-3977 0 1 0
chr2:65022457|65022692 hsa-miR-3977 -6 1 0
chr17:42779226|42779462 hsa-miR-3977 6 1 0
chr22:37830938|37831093 hsa-miR-3977 -14 1 0
chr12:48826450|48826806 hsa-miR-3977 0 1 0
chr19:54123789|54123918 hsa-miR-3977 0 1 0
chr4:52713657|52713924 hsa-miR-3977 0 1 0
chr15:40393880|40394035 hsa-miR-3977 0 1 0
chr6:28904490|28904576 hsa-miR-3977 0 1 0
chr15:40393917|40394158 hsa-miR-3977 0 1 0
chr1:151342151|151342284 hsa-miR-3977 0 1 0
chr13:106492823|106493021 hsa-miR-3977 0 1 0
chr3:133588946|133589126 hsa-miR-3977 0 1 0
chr17:28746292|28746671 hsa-miR-3977 0 1 0
chr12:120698438|120698619 hsa-miR-3977 0 1 0
chr1:45008673|45009408 hsa-miR-3977 0 1 0
chr2:218437183|218437269 hsa-miR-3977 0 1 0
chr7:152121679|152121831 hsa-miR-3977 0 1 0
chr12:11894040|11894109 hsa-miR-3977 0 1 0
chr6:28904490|28904665 hsa-miR-3977 0 1 0
chr2:219182992|219183094 hsa-miR-3977 0 1 0
chr8:70111582|70111705 hsa-miR-3977 0 1 0
chr6:153282512|153282733 hsa-miR-3977 0 1 0
chr8:43022243|43022377 hsa-miR-3977 0 1 0
chr3:65855097|65855246 hsa-miR-3977 0 1 0
chr16:75631499|75631747 hsa-miR-3977 0 1 0
chr13:106492917|106493093 hsa-miR-3977 0 1 0
chr1:32230991|32231246 hsa-miR-3977 0 1 0
chr14:94380930|94381071 hsa-miR-3977 0 1 0
chr20:435665|435841 hsa-miR-3977 0 1 0
chr4:38761188|38761346 hsa-miR-3977 0 1 0
chr3:128637977|128638105 hsa-miR-3977 0 1 0
chr1:151342151|151342376 hsa-miR-3977 0 1 0
chr9:137613715|137614094 hsa-miR-3977 0 1 0
chr14:94380930|94381107 hsa-miR-3977 0 1 0
chr7:100033549|100033815 hsa-miR-3977 0 1 0
chr6:132683148|132683248 hsa-miR-3977 0 1 0
chr2:86504043|86504195 hsa-miR-3977 0 1 0
chr2:232682030|232682239 hsa-miR-3977 0 1 0
chr13:106492884|106493000 hsa-miR-3977 0 1 0
chr2:219182992|219183237 hsa-miR-3977 0 1 0
chr3:170111326|170111523 hsa-miR-3977 1 0 0
chr19:42249534|42249911 hsa-miR-3977 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-3977 CD274 CD274 molecule HGNC:17635 details
hsa-miR-3977 details
hsa-miR-3977 ZBTB39 zinc finger and BTB domain containing 39 HGNC:29014 details
hsa-miR-3977 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon HGNC:12851 details
hsa-miR-3977 PCGF3 polycomb group ring finger 3 HGNC:10066 details
hsa-miR-3977 NAA50 N-alpha-acetyltransferase 50, NatE catalytic subunit HGNC:29533 details
hsa-miR-3977 GTF2H5 general transcription factor IIH subunit 5 HGNC:21157 details
hsa-miR-3977 KPNA5 karyopherin subunit alpha 5 HGNC:6398 details
hsa-miR-3977 EREG epiregulin HGNC:3443 details
hsa-miR-3977 ZNF578 zinc finger protein 578 HGNC:26449 details
hsa-miR-3977 ZNF333 zinc finger protein 333 HGNC:15624 details
hsa-miR-3977 LSAMP limbic system associated membrane protein HGNC:6705 details
hsa-miR-3977 SCN9A sodium voltage-gated channel alpha subunit 9 HGNC:10597 details
hsa-miR-3977 COL18A1 collagen type XVIII alpha 1 chain HGNC:2195 details
hsa-miR-3977 B3GALT5 beta-1,3-galactosyltransferase 5 HGNC:920 details
hsa-miR-3977 RAB32 RAB32, member RAS oncogene family HGNC:9772 details
hsa-miR-3977 ZBTB49 zinc finger and BTB domain containing 49 HGNC:19883 details
hsa-miR-3977 SULT1B1 sulfotransferase family 1B member 1 HGNC:17845 details
hsa-miR-3977 FAM241A family with sequence similarity 241 member A HGNC:26813 details
hsa-miR-3977 PDF peptide deformylase, mitochondrial HGNC:30012 details
hsa-miR-3977 SERPINE1 serpin family E member 1 HGNC:8583 details
hsa-miR-3977 SAR1B secretion associated Ras related GTPase 1B HGNC:10535 details
hsa-miR-3977 PPP2R5D protein phosphatase 2 regulatory subunit B'delta HGNC:9312 details
hsa-miR-3977 MYPN myopalladin HGNC:23246 details
hsa-miR-3977 MBOAT2 membrane bound O-acyltransferase domain containing 2 HGNC:25193 details
hsa-miR-3977 MAD2L1 mitotic arrest deficient 2 like 1 HGNC:6763 details
hsa-miR-3977 GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 HGNC:4125 details
hsa-miR-3977 ELOVL7 ELOVL fatty acid elongase 7 HGNC:26292 details
hsa-miR-3977 TWF1 twinfilin actin binding protein 1 HGNC:9620 details
hsa-miR-3977 UBE2H ubiquitin conjugating enzyme E2 H HGNC:12484 details
hsa-miR-3977 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 HGNC:8549 details
hsa-miR-3977 ORC4 origin recognition complex subunit 4 HGNC:8490 details
hsa-miR-3977 ZFP36L1 ZFP36 ring finger protein like 1 HGNC:1107 details
hsa-miR-3977 ERBIN erbb2 interacting protein HGNC:15842 details
hsa-miR-3977 PRC1 protein regulator of cytokinesis 1 HGNC:9341 details
hsa-miR-3977 PPP2R1B protein phosphatase 2 scaffold subunit Abeta HGNC:9303 details
hsa-miR-3977 ZNF664 zinc finger protein 664 HGNC:25406 details
hsa-miR-3977 URM1 ubiquitin related modifier 1 HGNC:28378 details
hsa-miR-3977 DCTN5 dynactin subunit 5 HGNC:24594 details
hsa-miR-3977 MT1A metallothionein 1A HGNC:7393 details
hsa-miR-3977 MAPKAPK5 MAPK activated protein kinase 5 HGNC:6889 details
hsa-miR-3977 CYP24A1 cytochrome P450 family 24 subfamily A member 1 HGNC:2602 details
hsa-miR-3977 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 HGNC:15606 details
hsa-miR-3977 ZNF610 zinc finger protein 610 HGNC:26687 details
hsa-miR-3977 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 HGNC:21906 details
hsa-miR-3977 details
hsa-miR-3977 TRAPPC4 trafficking protein particle complex subunit 4 HGNC:19943 details
hsa-miR-3977 SLC22A18AS solute carrier family 22 member 18 antisense HGNC:10965 details
hsa-miR-3977 LILRA2 leukocyte immunoglobulin like receptor A2 HGNC:6603 details
hsa-miR-3977 VASH1 vasohibin 1 HGNC:19964 details
hsa-miR-3977 SLC27A4 solute carrier family 27 member 4 HGNC:10998 details
hsa-miR-3977 MCU mitochondrial calcium uniporter HGNC:23526 details
hsa-miR-3977 GDE1 glycerophosphodiester phosphodiesterase 1 HGNC:29644 details
hsa-miR-3977 FAM53C family with sequence similarity 53 member C HGNC:1336 details
hsa-miR-3977 CBLB Cbl proto-oncogene B HGNC:1542 details
hsa-miR-3977 details
hsa-miR-3977 GALM galactose mutarotase HGNC:24063 details
hsa-miR-3977 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase HGNC:8587 details
hsa-miR-3977 RFX3 regulatory factor X3 HGNC:9984 details
hsa-miR-3977 FGF10 fibroblast growth factor 10 HGNC:3666 details
hsa-miR-3977 LAX1 lymphocyte transmembrane adaptor 1 HGNC:26005 details
hsa-miR-3977 MICB MHC class I polypeptide-related sequence B HGNC:7091 details
hsa-miR-3977 KCNK6 potassium two pore domain channel subfamily K member 6 HGNC:6281 details
hsa-miR-3977 STK40 serine/threonine kinase 40 HGNC:21373 details
hsa-miR-3977 WDPCP WD repeat containing planar cell polarity effector HGNC:28027 details
hsa-miR-3977 MTMR7 myotubularin related protein 7 HGNC:7454 details
hsa-miR-3977 EED embryonic ectoderm development HGNC:3188 details
hsa-miR-3977 RAD54L2 RAD54 like 2 HGNC:29123 details
hsa-miR-3977 SPOUT1 SPOUT domain containing methyltransferase 1 HGNC:26933 details
hsa-miR-3977 FUT4 fucosyltransferase 4 HGNC:4015 details
hsa-miR-3977 COLEC10 collectin subfamily member 10 HGNC:2220 details
hsa-miR-3977 PPP1R1C protein phosphatase 1 regulatory inhibitor subunit 1C HGNC:14940 details
hsa-miR-3977 KLF7 Kruppel like factor 7 HGNC:6350 details
hsa-miR-3977 WDFY1 WD repeat and FYVE domain containing 1 HGNC:20451 details
hsa-miR-3977 MTG2 mitochondrial ribosome associated GTPase 2 HGNC:16239 details
hsa-miR-3977 NFATC3 nuclear factor of activated T cells 3 HGNC:7777 details
hsa-miR-3977 CNRIP1 cannabinoid receptor interacting protein 1 HGNC:24546 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab