miRNA Card

miRNA General Information
miRNA ID hsa-miR-4460
Description Homo sapiens miR-4460 stem-loop
Comment None
Experiment Illumina [1]
Sequence AUAGUGGUUGUGAAUUUACCUU
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr19:38543347|38548420 hsa-miR-4460 1 1 1

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr17:19648801|19649033 hsa-miR-4460 1 0 0
chr17:65219967|65220122 hsa-miR-4460 1 0 0
chr13:99537830|99539557 hsa-miR-4460 0 1 0
chr12:6936193|6936337 hsa-miR-4460 0 1 0
chr21:39297244|39297346 hsa-miR-4460 0 1 0
chr5:72220484|72220717 hsa-miR-4460 0 1 0
chrX:16852953|16853076 hsa-miR-4460 0 1 0
chr12:6936120|6936341 hsa-miR-4460 0 1 0
chr12:6936136|6936363 hsa-miR-4460 0 1 0
chr12:6936139|6936256 hsa-miR-4460 0 1 0
chr4:73098365|73098496 hsa-miR-4460 0 1 0
chr17:42544182|42544367 hsa-miR-4460 0 1 0
chr12:51996285|51996495 hsa-miR-4460 0 1 0
chr15:63640184|63640319 hsa-miR-4460 0 1 0
chr19:11549760|11549894 hsa-miR-4460 1 0 0
chr11:63997591|63997707 hsa-miR-4460 1 0 0
chr11:63997591|63997715 hsa-miR-4460 1 0 0
chr2:186505516|186505841 hsa-miR-4460 1 0 0
chr2:96328326|96328439 hsa-miR-4460 1 0 0
chr17:19648801|19649009 hsa-miR-4460 1 0 0
chr6:139373490|139373662 hsa-miR-4460 1 0 0
chr8:41930080|41930226 hsa-miR-4460 1 0 0
chr3:155182488|155182557 hsa-miR-4460 1 0 0
chr12:53315551|53315729 hsa-miR-4460 1 0 0
chr8:69659330|69659428 hsa-miR-4460 1 0 0
chr14:100262304|100262466 hsa-miR-4460 1 0 0
chr17:42199439|42199544 hsa-miR-4460 0 1 0
chr7:155780995|155781174 hsa-miR-4460 0 1 0
chr5:176346382|176346492 hsa-miR-4460 0 1 0
chr12:6870562|6870662 hsa-miR-4460 0 1 0
chr5:176346382|176346524 hsa-miR-4460 0 1 0
chr20:482866|482989 hsa-miR-4460 0 1 0
chr14:105741491|105741780 hsa-miR-4460 0 1 0
chr6:3269264|3269414 hsa-miR-4460 0 1 0
chr9:121784513|121784711 hsa-miR-4460 0 1 0
chr17:64001103|64001253 hsa-miR-4460 0 1 0
chr2:161371172|161371322 hsa-miR-4460 0 1 0
chr22:24541745|24541995 hsa-miR-4460 0 1 0
chr17:1423069|1423321 hsa-miR-4460 0 1 0
chr6:121447775|121447934 hsa-miR-4460 0 1 0
chr10:5963428|5963546 hsa-miR-4460 0 1 0
chr8:142773286|142773412 hsa-miR-4460 0 1 0
chr1:223775534|223775735 hsa-miR-4460 0 1 0
chr11:61322296~61322412 hsa-miR-4460 0 1 0
chr2:186505516~186505841 hsa-miR-4460 0 1 0
chr1:110345564~110345757 hsa-miR-4460 0 1 0
chr12:6936120~6936297 hsa-miR-4460 0 1 0
chr6:139373490~139373662 hsa-miR-4460 0 1 0
chr6:121447835~121447970 hsa-miR-4460 0 1 0
chr4:73098365~73098496 hsa-miR-4460 0 1 0
chr3:112537867~112541842 hsa-miR-4460 0 1 0
chr7:28954051~28954262 hsa-miR-4460 0 1 0
chr14:23097839~23097905 hsa-miR-4460 0 1 0
chr1:235548594~235548712 hsa-miR-4460 0 1 0
chr12:66119981~66120104 hsa-miR-4460 0 1 0
chr12:6936086~6936297 hsa-miR-4460 0 1 0
chr19:45627647~45627751 hsa-miR-4460 0 1 0
chr17:3663384~3663544 hsa-miR-4460 0 1 0
chr20:34912150~34912247 hsa-miR-4460 0 1 0
chr1:156738502~156738608 hsa-miR-4460 0 1 0
chr12:12790933~12791298 hsa-miR-4460 0 1 0
chr2:101874122~101877020 hsa-miR-4460 0 1 0
chr4:147617989~147618079 hsa-miR-4460 0 1 0
chr19:42485483~42485595 hsa-miR-4460 0 1 0
chr12:6870562~6870662 hsa-miR-4460 0 1 0
chr2:233144095|233144310 hsa-miR-4460 1 0 0
chr1:27595805|27595933 hsa-miR-4460 1 0 0
chr1:28933560|28933677 hsa-miR-4460 0 1 0
chr19:16090912|16091048 hsa-miR-4460 0 1 0
chr7:105110310|105110602 hsa-miR-4460 0 1 0
chr5:137962653|137962762 hsa-miR-4460 0 1 0
chr7:36269910|36270020 hsa-miR-4460 0 1 0
chrX:20196643|20196797 hsa-miR-4460 0 1 0
chr10:127015440|127015619 hsa-miR-4460 0 1 0
chr3:184137898|184138198 hsa-miR-4460 0 1 0
chr22:24400095|24400330 hsa-miR-4460 0 1 0
chr20:48750188|48750311 hsa-miR-4460 0 1 0
chr16:66721543|66721679 hsa-miR-4460 0 1 0
chr11:63997559|63997654 hsa-miR-4460 1 0 0
chr8:69659330|69659420 hsa-miR-4460 1 0 0
chr17:47745958|47746063 hsa-miR-4460 1 0 0
chr19:53873547|53873652 hsa-miR-4460 1 0 0
chr19:5993859|5993960 hsa-miR-4460 1 0 0
chr11:63997591|63997705 hsa-miR-4460 1 0 0
chr17:19648801|19648983 hsa-miR-4460 1 0 0
chr11:46320979|46321090 hsa-miR-4460 1 0 0
chr1:35187051|35187239 hsa-miR-4460 0 1 0
chr9:127843115|127843219 hsa-miR-4460 0 1 0
chr1:223775534|223775741 hsa-miR-4460 0 1 0
chr5:176346411|176346524 hsa-miR-4460 0 1 0
chr17:4999896|5000279 hsa-miR-4460 0 1 0
chr3:98811212|98811530 hsa-miR-4460 0 1 0
chr5:176346382|176346465 hsa-miR-4460 0 1 0
chr5:176346382|176346489 hsa-miR-4460 0 1 0
chr10:68983771|68983904 hsa-miR-4460 0 1 0
chr22:38215421|38215610 hsa-miR-4460 0 1 0
chr16:66721543|66721683 hsa-miR-4460 0 1 0
chr6:145802979|145803136 hsa-miR-4460 0 1 0
chrX:135033075|135033205 hsa-miR-4460 0 1 0
chr3:98811266|98811530 hsa-miR-4460 0 1 0
chr17:1423069|1423286 hsa-miR-4460 0 1 0
chr8:143984035|143984248 hsa-miR-4460 0 1 0
chr1:235548594|235548712 hsa-miR-4460 0 1 0
chr12:66119981|66120104 hsa-miR-4460 0 1 0
chr2:161371179|161371310 hsa-miR-4460 0 1 0
chr2:47822218|47823360 hsa-miR-4460 0 1 0
chr17:78993367|78993525 hsa-miR-4460 0 1 0
chr18:9957029|9957223 hsa-miR-4460 0 1 0
chr6:121447845|121447976 hsa-miR-4460 0 1 0
chr16:2705163|2705477 hsa-miR-4460 0 1 0
chr11:63624991|63625160 hsa-miR-4460 0 1 0
chr14:105624444|105624580 hsa-miR-4460 0 1 0
chr6:121447625|121447934 hsa-miR-4460 0 1 0
chr12:6936139|6936258 hsa-miR-4460 0 1 0
chr15:41536176|41536569 hsa-miR-4460 0 1 0
chr21:44889369|44889495 hsa-miR-4460 0 1 0
chr16:50801115|50801238 hsa-miR-4460 -6 1 0
chr14:52640750|52640865 hsa-miR-4460 -8 1 0
chr5:173610473|173610707 hsa-miR-4460 -12 1 0
chr2:186505527|186505830 hsa-miR-4460 -16 1 0
chr15:67403802|67403947 hsa-miR-4460 -5 1 0
chr19:11549695|11549903 hsa-miR-4460 1 0 0
chr19:11549706|11549894 hsa-miR-4460 1 0 0
chr1:32334296|32334363 hsa-miR-4460 1 0 0
chr9:35697831|35698094 hsa-miR-4460 1 0 0
chr9:94924459|94924587 hsa-miR-4460 1 0 0
chr19:53873541|53873658 hsa-miR-4460 1 0 0
chr11:64564526|64564741 hsa-miR-4460 1 0 0
chr16:88052944|88053091 hsa-miR-4460 1 0 0
chr8:69659341|69659481 hsa-miR-4460 1 0 0
chr11:63997591|63997713 hsa-miR-4460 1 0 0
chr8:69659350|69659481 hsa-miR-4460 1 0 0
chr19:53873547|53873669 hsa-miR-4460 1 0 0
chr8:69659341|69659428 hsa-miR-4460 1 0 0
chr12:6936201|6936348 hsa-miR-4460 0 1 0
chr13:110149185|110149306 hsa-miR-4460 0 1 0
chr17:69550953|69551147 hsa-miR-4460 0 1 0
chr6:73466371|73466596 hsa-miR-4460 0 1 0
chr16:66721543|66721668 hsa-miR-4460 0 1 0
chr3:50351376|50351505 hsa-miR-4460 0 1 0
chr10:68983729|68983911 hsa-miR-4460 0 1 0
chr8:19839495|19839627 hsa-miR-4460 0 1 0
chr2:159448296|159448360 hsa-miR-4460 0 1 0
chr6:159755322|159755424 hsa-miR-4460 0 1 0
chr16:3066735|3066866 hsa-miR-4460 0 1 0
chr6:159755391|159755549 hsa-miR-4460 0 1 0
chr5:176346382|176346482 hsa-miR-4460 0 1 0
chr6:75134826|75137549 hsa-miR-4460 0 1 0
chr10:68983729|68983904 hsa-miR-4460 0 1 0
chr9:121784496|121784711 hsa-miR-4460 0 1 0
chr12:6870440|6870645 hsa-miR-4460 0 1 0
chr9:121784519|121784711 hsa-miR-4460 0 1 0
chr6:31640873|31641190 hsa-miR-4460 0 1 0
chr2:161371172|161371308 hsa-miR-4460 0 1 0
chr2:101874115|101874217 hsa-miR-4460 0 1 0
chr1:156738394|156738585 hsa-miR-4460 0 1 0
chr11:66314553|66314688 hsa-miR-4460 0 1 0
chr21:41918105|41918227 hsa-miR-4460 0 1 0
chr9:112221273|112221398 hsa-miR-4460 0 1 0
chr19:1257996|1258211 hsa-miR-4460 0 1 0
chr5:55283385|55283574 hsa-miR-4460 0 1 0
chr17:29293889|29294008 hsa-miR-4460 1 0 0
chr8:69659209|69659428 hsa-miR-4460 1 0 0
chr17:19648801|19648992 hsa-miR-4460 1 0 0
chr11:63997610|63997768 hsa-miR-4460 1 0 0
chr20:48010708|48010841 hsa-miR-4460 1 0 0
chr8:69659263|69659415 hsa-miR-4460 1 0 0
chr11:63997493|63997715 hsa-miR-4460 1 0 0
chr11:63997591|63997709 hsa-miR-4460 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-4460 CEBPD CCAAT enhancer binding protein delta HGNC:1835 details
hsa-miR-4460 SMOX spermine oxidase HGNC:15862 details
hsa-miR-4460 RPUSD2 RNA pseudouridine synthase domain containing 2 HGNC:24180 details
hsa-miR-4460 TM9SF3 transmembrane 9 superfamily member 3 HGNC:21529 details
hsa-miR-4460 SIX4 SIX homeobox 4 HGNC:10890 details
hsa-miR-4460 RAB30 RAB30, member RAS oncogene family HGNC:9770 details
hsa-miR-4460 NUFIP2 nuclear FMR1 interacting protein 2 HGNC:17634 details
hsa-miR-4460 IPPK inositol-pentakisphosphate 2-kinase HGNC:14645 details
hsa-miR-4460 EFHD2 EF-hand domain family member D2 HGNC:28670 details
hsa-miR-4460 BCL2L11 BCL2 like 11 HGNC:994 details
hsa-miR-4460 AIDA axin interactor, dorsalization associated HGNC:25761 details
hsa-miR-4460 DYRK1B dual specificity tyrosine phosphorylation regulated kinase 1B HGNC:3092 details
hsa-miR-4460 LYRM2 LYR motif containing 2 HGNC:25229 details
hsa-miR-4460 ZC3H11A zinc finger CCCH-type containing 11A HGNC:29093 details
hsa-miR-4460 details
hsa-miR-4460 NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 HGNC:23987 details
hsa-miR-4460 SYNPO2L synaptopodin 2 like HGNC:23532 details
hsa-miR-4460 MYPN myopalladin HGNC:23246 details
hsa-miR-4460 C3orf62 chromosome 3 open reading frame 62 HGNC:24771 details
hsa-miR-4460 TIMELESS timeless circadian regulator HGNC:11813 details
hsa-miR-4460 TMED4 transmembrane p24 trafficking protein 4 HGNC:22301 details
hsa-miR-4460 DDHD2 DDHD domain containing 2 HGNC:29106 details
hsa-miR-4460 TIGD2 tigger transposable element derived 2 HGNC:18333 details
hsa-miR-4460 RNF149 ring finger protein 149 HGNC:23137 details
hsa-miR-4460 PLEKHA8 pleckstrin homology domain containing A8 HGNC:30037 details
hsa-miR-4460 MED13 mediator complex subunit 13 HGNC:22474 details
hsa-miR-4460 CNKSR2 connector enhancer of kinase suppressor of Ras 2 HGNC:19701 details
hsa-miR-4460 CAPN1 calpain 1 HGNC:1476 details
hsa-miR-4460 VEZF1 vascular endothelial zinc finger 1 HGNC:12949 details
hsa-miR-4460 TSPAN12 tetraspanin 12 HGNC:21641 details
hsa-miR-4460 ZCCHC2 zinc finger CCHC-type containing 2 HGNC:22916 details
hsa-miR-4460 YOD1 YOD1 deubiquitinase HGNC:25035 details
hsa-miR-4460 TM7SF3 transmembrane 7 superfamily member 3 HGNC:23049 details
hsa-miR-4460 ZXDA zinc finger X-linked duplicated A HGNC:13198 details
hsa-miR-4460 HMGB1 high mobility group box 1 HGNC:4983 details
hsa-miR-4460 ZNF621 zinc finger protein 621 HGNC:24787 details
hsa-miR-4460 MCM8 minichromosome maintenance 8 homologous recombination repair factor HGNC:16147 details
hsa-miR-4460 PPIE peptidylprolyl isomerase E HGNC:9258 details
hsa-miR-4460 LMAN1 lectin, mannose binding 1 HGNC:6631 details
hsa-miR-4460 DST dystonin HGNC:1090 details
hsa-miR-4460 SCOC short coiled-coil protein HGNC:20335 details
hsa-miR-4460 GTF2A1 general transcription factor IIA subunit 1 HGNC:4646 details
hsa-miR-4460 ZDHHC21 zinc finger DHHC-type palmitoyltransferase 21 HGNC:20750 details
hsa-miR-4460 GATM glycine amidinotransferase HGNC:4175 details
hsa-miR-4460 SIRPA signal regulatory protein alpha HGNC:9662 details
hsa-miR-4460 CD9 CD9 molecule HGNC:1709 details
hsa-miR-4460 HOXD12 homeobox D12 HGNC:5135 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab