miRNA Card

miRNA General Information
miRNA ID hsa-miR-4474-5p
Description Homo sapiens miR-4474 stem-loop
Comment None
Experiment Illumina [2-3]
Sequence UUAGUCUCAUGAUCAGACACA
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr1:237417049|237441483 hsa-miR-4474-5p 1 0 1
chr6:30190546|30190879 hsa-miR-4474-5p 1 1 0

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr1:224400952|224401055 hsa-miR-4474-5p 0 1 0
chr13:113351559|113351794 hsa-miR-4474-5p 0 1 0
chr4:6642058|6642225 hsa-miR-4474-5p 0 1 0
chr2:229796659|229796782 hsa-miR-4474-5p 0 1 0
chr5:115619272|115619398 hsa-miR-4474-5p 0 1 0
chr8:29069265|29069484 hsa-miR-4474-5p 0 1 0
chr17:15437419|15437616 hsa-miR-4474-5p 0 1 0
chr11:295265|295411 hsa-miR-4474-5p 0 1 0
chr17:61078415|61078529 hsa-miR-4474-5p 1 0 0
chr19:52016631|52016798 hsa-miR-4474-5p 0 1 0
chr12:120722190|120722339 hsa-miR-4474-5p 0 1 0
chr5:170745057|170745190 hsa-miR-4474-5p 0 1 0
chr17:2689591|2689769 hsa-miR-4474-5p 0 1 0
chr19:41904984|41905224 hsa-miR-4474-5p 0 1 0
chrX:54923551|54923768 hsa-miR-4474-5p 0 1 0
chr12:13081138|13081380 hsa-miR-4474-5p 0 1 0
chr2:98622028|98622194 hsa-miR-4474-5p 0 1 0
chr16:87707874|87708017 hsa-miR-4474-5p 0 1 0
chr5:35056693|35056797 hsa-miR-4474-5p 0 1 0
chr8:29069265|29069441 hsa-miR-4474-5p 0 1 0
chr4:82484120|82484292 hsa-miR-4474-5p 0 1 0
chr4:6642058|6642229 hsa-miR-4474-5p 0 1 0
chr1:1234169|1234331 hsa-miR-4474-5p 0 1 0
chr15:48140764|48140925 hsa-miR-4474-5p 0 1 0
chr2:55866678|55866833 hsa-miR-4474-5p 0 1 0
chr1:224400950|224404450 hsa-miR-4474-5p 0 1 0
chr2:69320485|69320594 hsa-miR-4474-5p 0 1 0
chr1:224400976|224401065 hsa-miR-4474-5p 0 1 0
chr17:68422762|68422993 hsa-miR-4474-5p 0 1 0
chr4:6642058~6642225 hsa-miR-4474-5p 0 1 0
chr8:144263741~144263890 hsa-miR-4474-5p 0 1 0
chr1:224400950~224401065 hsa-miR-4474-5p 0 1 0
chr6:108043584~108043866 hsa-miR-4474-5p 0 1 0
chr1:156669435~156669558 hsa-miR-4474-5p 0 1 0
chr4:52713948~52714061 hsa-miR-4474-5p 0 1 0
chr20:37241482~37241606 hsa-miR-4474-5p 0 1 0
chr9:86300935~86301028 hsa-miR-4474-5p 0 1 0
chr2:229796701~229796782 hsa-miR-4474-5p 0 1 0
chr12:48660597~48667765 hsa-miR-4474-5p 0 1 0
chr15:63068417~63068557 hsa-miR-4474-5p 0 1 0
chr8:29069265~29069484 hsa-miR-4474-5p 0 1 0
chr2:217800683~217800936 hsa-miR-4474-5p 0 1 0
chr14:80904818~80904909 hsa-miR-4474-5p 0 1 0
chr5:76917427|76917556 hsa-miR-4474-5p 1 0 0
chr22:36369286|36369477 hsa-miR-4474-5p 0 1 0
chr8:70279516|70279648 hsa-miR-4474-5p 0 1 0
chr18:57711634|57711751 hsa-miR-4474-5p 0 1 0
chr4:40526842|40526974 hsa-miR-4474-5p 0 1 0
chr10:102479639|102479748 hsa-miR-4474-5p 0 1 0
chr8:47052131|47052225 hsa-miR-4474-5p 0 1 0
chr17:3931167|3931295 hsa-miR-4474-5p 0 1 0
chr22:31270194|31270392 hsa-miR-4474-5p 0 1 0
chr1:202603567|202603721 hsa-miR-4474-5p 1 0 0
chr7:90799222|90799304 hsa-miR-4474-5p 0 1 0
chr8:1761968|1762112 hsa-miR-4474-5p 0 1 0
chr1:36328000|36328145 hsa-miR-4474-5p 0 1 0
chr19:21527752|21527819 hsa-miR-4474-5p 0 1 0
chr6:31896343|31896423 hsa-miR-4474-5p 0 1 0
chr5:39241291|39241469 hsa-miR-4474-5p 0 1 0
chr21:34813547|34813776 hsa-miR-4474-5p 0 1 0
chr5:68292852|68293007 hsa-miR-4474-5p 0 1 0
chr10:98406198|98406324 hsa-miR-4474-5p 0 1 0
chr10:73769092|73769460 hsa-miR-4474-5p 1 0 0
chr1:42926685|42926879 hsa-miR-4474-5p 0 1 0
chr1:224400950|224401065 hsa-miR-4474-5p 0 1 0
chr11:295240|295404 hsa-miR-4474-5p 0 1 0
chr20:36549398|36549609 hsa-miR-4474-5p 0 1 0
chr1:224400976|224401055 hsa-miR-4474-5p 0 1 0
chr1:46300065|46300206 hsa-miR-4474-5p 0 1 0
chr10:110123050|110123286 hsa-miR-4474-5p 0 1 0
chr20:38449444|38449657 hsa-miR-4474-5p 0 1 0
chr8:1761896|1762112 hsa-miR-4474-5p 0 1 0
chr17:47601926|47602064 hsa-miR-4474-5p 0 1 0
chr13:112826810|112826882 hsa-miR-4474-5p 0 1 0
chr10:116885665|116885828 hsa-miR-4474-5p 0 1 0
chr1:236539842|236540005 hsa-miR-4474-5p 0 1 0
chr11:57741695|57742184 hsa-miR-4474-5p 0 1 0
chr13:45988787|45988983 hsa-miR-4474-5p 0 1 0
chr11:62721873|62722205 hsa-miR-4474-5p 0 1 0
chr14:74903159|74903314 hsa-miR-4474-5p 0 1 0
chr11:295240|295397 hsa-miR-4474-5p 0 1 0
chr19:41771441|41771613 hsa-miR-4474-5p 0 1 0
chr2:229796701|229796782 hsa-miR-4474-5p 0 1 0
chr1:1234169|1234319 hsa-miR-4474-5p 0 1 0
chr20:45815682|45815913 hsa-miR-4474-5p 0 1 0
chr10:116885665|116885811 hsa-miR-4474-5p 0 1 0
chr2:27661124|27661264 hsa-miR-4474-5p 0 1 0
chr20:45815655|45815913 hsa-miR-4474-5p 0 1 0
chr1:42926690|42926874 hsa-miR-4474-5p 0 1 0
chr19:41904984|41905228 hsa-miR-4474-5p 0 1 0
chrX:153783757|153784115 hsa-miR-4474-5p 0 1 0
chr2:203428043|203428176 hsa-miR-4474-5p 0 1 0
chr8:29069265|29069480 hsa-miR-4474-5p 0 1 0
chr11:62392320|62392469 hsa-miR-4474-5p 0 1 0
chr1:224400952|224401069 hsa-miR-4474-5p 0 1 0
chr19:6212998|6213172 hsa-miR-4474-5p 0 1 0
chr19:40832414|40832604 hsa-miR-4474-5p 0 1 0
chr4:102797035|102797315 hsa-miR-4474-5p 0 1 0
chr20:49505888|49506068 hsa-miR-4474-5p 0 1 0
chr7:2613884|2614063 hsa-miR-4474-5p 0 1 0
chr9:92617971|92618158 hsa-miR-4474-5p 0 1 0
chr6:4031597|4031901 hsa-miR-4474-5p 0 1 0
chr2:75670283|75670612 hsa-miR-4474-5p 0 1 0
chr17:59655908|59655980 hsa-miR-4474-5p 0 1 0
chr20:35306384|35306519 hsa-miR-4474-5p -2 1 0
chr1:156669435|156669558 hsa-miR-4474-5p -6 1 0
chr3:149169227|149169467 hsa-miR-4474-5p -10 1 0
chr1:224400976|224401069 hsa-miR-4474-5p -10 1 0
chr20:45815558|45815913 hsa-miR-4474-5p 0 1 0
chr1:153949171|153949227 hsa-miR-4474-5p 0 1 0
chr12:120700567|120700844 hsa-miR-4474-5p 0 1 0
chr11:295138|295389 hsa-miR-4474-5p 0 1 0
chr12:110377705|110377843 hsa-miR-4474-5p 0 1 0
chr18:57550671|57550807 hsa-miR-4474-5p 0 1 0
chr3:119811843|119812109 hsa-miR-4474-5p 0 1 0
chr11:8707835|8711203 hsa-miR-4474-5p 0 1 0
chr7:67239218|67239338 hsa-miR-4474-5p 0 1 0
chr8:37698607|37698738 hsa-miR-4474-5p 0 1 0
chr7:26667472|26667683 hsa-miR-4474-5p 0 1 0
chr11:61316294|61316555 hsa-miR-4474-5p 0 1 0
chr1:42926682|42926824 hsa-miR-4474-5p 0 1 0
chr1:224400976|224401062 hsa-miR-4474-5p 0 1 0
chr11:62721873|62722202 hsa-miR-4474-5p 0 1 0
chr11:295221|295316 hsa-miR-4474-5p 0 1 0
chr4:52713948|52714061 hsa-miR-4474-5p 0 1 0
chr2:147928386|147928495 hsa-miR-4474-5p 0 1 0
chr2:167954602|167954723 hsa-miR-4474-5p 0 1 0
chr20:45815585|45815913 hsa-miR-4474-5p 0 1 0
chr8:144263741|144263890 hsa-miR-4474-5p 0 1 0
chr19:41771467|41771613 hsa-miR-4474-5p 0 1 0
chr19:41904984|41905218 hsa-miR-4474-5p 0 1 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-4474-5p PHF14 PHD finger protein 14 HGNC:22203 details
hsa-miR-4474-5p CEP85L centrosomal protein 85 like HGNC:21638 details
hsa-miR-4474-5p SLC35A1 solute carrier family 35 member A1 HGNC:11021 details
hsa-miR-4474-5p SIRT1 sirtuin 1 HGNC:14929 details
hsa-miR-4474-5p COL23A1 collagen type XXIII alpha 1 chain HGNC:22990 details
hsa-miR-4474-5p ID3 inhibitor of DNA binding 3, HLH protein HGNC:5362 details
hsa-miR-4474-5p TMEM50B transmembrane protein 50B HGNC:1280 details
hsa-miR-4474-5p SUMO1 small ubiquitin like modifier 1 HGNC:12502 details
hsa-miR-4474-5p DAZAP2 DAZ associated protein 2 HGNC:2684 details
hsa-miR-4474-5p ZNF776 zinc finger protein 776 HGNC:26765 details
hsa-miR-4474-5p NFATC2IP nuclear factor of activated T cells 2 interacting protein HGNC:25906 details
hsa-miR-4474-5p ABHD18 abhydrolase domain containing 18 HGNC:26111 details
hsa-miR-4474-5p RRP36 ribosomal RNA processing 36 HGNC:21374 details
hsa-miR-4474-5p GALK2 galactokinase 2 HGNC:4119 details
hsa-miR-4474-5p SLC38A9 solute carrier family 38 member 9 HGNC:26907 details
hsa-miR-4474-5p TUBG1 tubulin gamma 1 HGNC:12417 details
hsa-miR-4474-5p SOD2 superoxide dismutase 2 HGNC:11180 details
hsa-miR-4474-5p PRIM1 DNA primase subunit 1 HGNC:9369 details
hsa-miR-4474-5p CEP55 centrosomal protein 55 HGNC:1161 details
hsa-miR-4474-5p ZNF84 zinc finger protein 84 HGNC:13159 details
hsa-miR-4474-5p RPL37 ribosomal protein L37 HGNC:10347 details
hsa-miR-4474-5p RWDD1 RWD domain containing 1 HGNC:20993 details
hsa-miR-4474-5p EBNA1BP2 EBNA1 binding protein 2 HGNC:15531 details
hsa-miR-4474-5p FBXL4 F-box and leucine rich repeat protein 4 HGNC:13601 details
hsa-miR-4474-5p CCDC93 coiled-coil domain containing 93 HGNC:25611 details
hsa-miR-4474-5p FRY FRY microtubule binding protein HGNC:20367 details
hsa-miR-4474-5p details
hsa-miR-4474-5p KLHL7 kelch like family member 7 HGNC:15646 details
hsa-miR-4474-5p DNPEP aspartyl aminopeptidase HGNC:2981 details
hsa-miR-4474-5p UTP6 UTP6 small subunit processome component HGNC:18279 details
hsa-miR-4474-5p HIF1AN hypoxia inducible factor 1 subunit alpha inhibitor HGNC:17113 details
hsa-miR-4474-5p FCHSD2 FCH and double SH3 domains 2 HGNC:29114 details
hsa-miR-4474-5p DDX53 DEAD-box helicase 53 HGNC:20083 details
hsa-miR-4474-5p PRCP prolylcarboxypeptidase HGNC:9344 details
hsa-miR-4474-5p ZNF519 zinc finger protein 519 HGNC:30574 details
hsa-miR-4474-5p TMCO1 transmembrane and coiled-coil domains 1 HGNC:18188 details
hsa-miR-4474-5p GPSM2 G protein signaling modulator 2 HGNC:29501 details
hsa-miR-4474-5p SLC24A2 solute carrier family 24 member 2 HGNC:10976 details
hsa-miR-4474-5p BCL2L1 BCL2 like 1 HGNC:992 details
hsa-miR-4474-5p DDR2 discoidin domain receptor tyrosine kinase 2 HGNC:2731 details
hsa-miR-4474-5p details
hsa-miR-4474-5p COPS7B COP9 signalosome subunit 7B HGNC:16760 details
hsa-miR-4474-5p SHISA9 shisa family member 9 HGNC:37231 details
hsa-miR-4474-5p SMIM21 small integral membrane protein 21 HGNC:27598 details
hsa-miR-4474-5p APLN apelin HGNC:16665 details
hsa-miR-4474-5p WDR13 WD repeat domain 13 HGNC:14352 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab