miRNA Card

miRNA General Information
miRNA ID hsa-miR-4504
Description Homo sapiens miR-4504 stem-loop
Comment None
Experiment Illumina [1]
Sequence UGUGACAAUAGAGAUGAACAUG
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr6:106568902|106568997 hsa-miR-4504 1 0 0
chr4:7031116|7031292 hsa-miR-4504 1 0 0
chr4:7031094|7031174 hsa-miR-4504 1 0 0
chr11:66533295|66533588 hsa-miR-4504 0 1 0
chr7:151235379|151235534 hsa-miR-4504 0 1 0
chr12:56160054|56160312 hsa-miR-4504 0 1 0
chr6:2463436|2463565 hsa-miR-4504 0 1 0
chr10:45457146|45457456 hsa-miR-4504 0 1 0
chr3:15648828|15648990 hsa-miR-4504 0 1 0
chr12:11894619|11894760 hsa-miR-4504 0 1 0
chr1:108699571|108699721 hsa-miR-4504 0 1 0
chr9:33026581|33026912 hsa-miR-4504 0 1 0
chr13:108304280|108304395 hsa-miR-4504 0 1 0
chr4:94875831|94996134 hsa-miR-4504 0 1 0
chr7:129606977|129607107 hsa-miR-4504 0 1 0
chrX:136511775|136511939 hsa-miR-4504 0 1 0
chr17:39711988|39712365 hsa-miR-4504 1 0 0
chrX:136511739|136511941 hsa-miR-4504 1 0 0
chr20:1456308|1456460 hsa-miR-4504 1 0 0
chr12:114706667|114706795 hsa-miR-4504 1 0 0
chr9:33026581|33026903 hsa-miR-4504 1 0 0
chr15:73570226|73570351 hsa-miR-4504 0 1 0
chr3:58146866|58148228 hsa-miR-4504 0 1 0
chr14:60968258|60968407 hsa-miR-4504 0 1 0
chr5:66180788|66180989 hsa-miR-4504 0 1 0
chr1:108699571|108699655 hsa-miR-4504 0 1 0
chr11:116900470|116900559 hsa-miR-4504 0 1 0
chr18:63124381|63124556 hsa-miR-4504 0 1 0
chr15:90500371|90500495 hsa-miR-4504 0 1 0
chr2:38984871|38985053 hsa-miR-4504 0 1 0
chr3:183683461|183683589 hsa-miR-4504 0 1 0
chr22:20139498|20139762 hsa-miR-4504 0 1 0
chr7:6691517|6691673 hsa-miR-4504 0 1 0
chr10:21513581|21513694 hsa-miR-4504 0 1 0
chr3:49675720|49675966 hsa-miR-4504 0 1 0
chr2:27436795|27437105 hsa-miR-4504 0 1 0
chr13:45979813|45979986 hsa-miR-4504 0 1 0
chr15:73570247~73570409 hsa-miR-4504 0 1 0
chr1:91719433~91719969 hsa-miR-4504 0 1 0
chrX:154354671~154354929 hsa-miR-4504 0 1 0
chr2:158640627~158640759 hsa-miR-4504 0 1 0
chr6:31629287~31629641 hsa-miR-4504 0 1 0
chrX:76177817~76177909 hsa-miR-4504 0 1 0
chr1:154585753~154585847 hsa-miR-4504 0 1 0
chr9:114324830~114325133 hsa-miR-4504 0 1 0
chr15:73570240~73570360 hsa-miR-4504 0 1 0
chrX:136511739~136511941 hsa-miR-4504 0 1 0
chr18:80045925|80046108 hsa-miR-4504 0 1 0
chr1:245131635~245131754 hsa-miR-4504 0 1 0
chr15:73570222~73570351 hsa-miR-4504 0 1 0
chr12:53721790~53721889 hsa-miR-4504 0 1 0
chr1:161119975~161120135 hsa-miR-4504 0 1 0
chr5:134197160~134197239 hsa-miR-4504 0 1 0
chr4:40812628|40812882 hsa-miR-4504 0 1 0
chr5:314484~314665 hsa-miR-4504 0 1 0
chr1:6012696|6012811 hsa-miR-4504 1 0 0
chr10:27175556|27175779 hsa-miR-4504 1 0 0
chr17:3915575|3915862 hsa-miR-4504 0 1 0
chr11:128772864|128772966 hsa-miR-4504 0 1 0
chr5:94938361|94938457 hsa-miR-4504 0 1 0
chr14:102729526|102729717 hsa-miR-4504 0 1 0
chr12:101770406|101770576 hsa-miR-4504 0 1 0
chr20:19529335|19529416 hsa-miR-4504 1 0 0
chr14:72974779|72974876 hsa-miR-4504 0 1 0
chr15:68292180|68292330 hsa-miR-4504 0 1 0
chr16:85693630|85693719 hsa-miR-4504 0 1 0
chr2:47832769|47833001 hsa-miR-4504 0 1 0
chr3:121634207|121634344 hsa-miR-4504 0 1 0
chr11:78338699|78338878 hsa-miR-4504 0 1 0
chr19:19792056|19792178 hsa-miR-4504 0 1 0
chr16:583963|584100 hsa-miR-4504 0 1 0
chr22:24557675|24557800 hsa-miR-4504 1 0 0
chr7:654271|654543 hsa-miR-4504 1 0 0
chr1:633892|634042 hsa-miR-4504 1 0 0
chr8:144521968|144522121 hsa-miR-4504 1 0 0
chr10:100274193|100274387 hsa-miR-4504 0 1 0
chr13:98018579|98018704 hsa-miR-4504 0 1 0
chr16:14246526|14246719 hsa-miR-4504 0 1 0
chr1:114730624|114732752 hsa-miR-4504 0 1 0
chr9:136459149|136459487 hsa-miR-4504 0 1 0
chr1:108699467|108699655 hsa-miR-4504 0 1 0
chr8:123182855|123183033 hsa-miR-4504 0 1 0
chr18:23473436|23473626 hsa-miR-4504 0 1 0
chr11:67607267|67607411 hsa-miR-4504 0 1 0
chr15:89197549|89197707 hsa-miR-4504 0 1 0
chr16:3142365|3142531 hsa-miR-4504 0 1 0
chr10:84417771|84425893 hsa-miR-4504 0 1 0
chr19:39386155|39386257 hsa-miR-4504 0 1 0
chr16:1460919|1461470 hsa-miR-4504 0 1 0
chr17:74431629|74431903 hsa-miR-4504 0 1 0
chr4:154570612|154570758 hsa-miR-4504 0 1 0
chrX:53085981|53086127 hsa-miR-4504 0 1 0
chr1:169853527|169853750 hsa-miR-4504 0 1 0
chr8:138163646|138163814 hsa-miR-4504 0 1 0
chr6:10393531|10400589 hsa-miR-4504 0 1 0
chr4:184020787|184020931 hsa-miR-4504 0 1 0
chr6:46145029|46145189 hsa-miR-4504 0 1 0
chr2:27381668|27381805 hsa-miR-4504 0 1 0
chr1:153982004|153982153 hsa-miR-4504 0 1 0
chr1:243415702|243426558 hsa-miR-4504 0 1 0
chr6:30650994|30651466 hsa-miR-4504 0 1 0
chr19:39386122|39386263 hsa-miR-4504 0 1 0
chr2:108788852|108812927 hsa-miR-4504 0 1 0
chr1:114730624|114732703 hsa-miR-4504 0 1 0
chr11:75571952|75572163 hsa-miR-4504 0 1 0
chr16:66404208|66404409 hsa-miR-4504 0 1 0
chr19:39386155|39386319 hsa-miR-4504 0 1 0
chr17:14303665|14303794 hsa-miR-4504 0 1 0
chr2:27381668|27381964 hsa-miR-4504 0 1 0
chr11:58619422|58619650 hsa-miR-4504 0 1 0
chr15:66816765|66816896 hsa-miR-4504 0 1 0
chr10:73793900|73794276 hsa-miR-4504 0 1 0
chr1:161119572|161119899 hsa-miR-4504 0 1 0
chr8:123182811|123183012 hsa-miR-4504 0 1 0
chr9:137455689|137456016 hsa-miR-4504 0 1 0
chr15:89197590|89197707 hsa-miR-4504 0 1 0
chr8:142701600|142701709 hsa-miR-4504 0 1 0
chr19:6737776|6737896 hsa-miR-4504 0 1 0
chr14:73931956|73932091 hsa-miR-4504 0 1 0
chr8:118346844|118346929 hsa-miR-4504 0 1 0
chr10:45457070|45457260 hsa-miR-4504 0 1 0
chr3:183683353|183683589 hsa-miR-4504 0 1 0
chr12:57095783|57096018 hsa-miR-4504 0 1 0
chr2:66572209|66572397 hsa-miR-4504 0 1 0
chr6:53039027|53039199 hsa-miR-4504 0 1 0
chr4:7774388|7774562 hsa-miR-4504 0 1 0
chr9:114324830|114325133 hsa-miR-4504 0 1 0
chrX:136511775|136511941 hsa-miR-4504 0 1 0
chr18:80045919|80046058 hsa-miR-4504 0 1 0
chr13:45979813|45979988 hsa-miR-4504 0 1 0
chr8:142700458|142701623 hsa-miR-4504 0 1 0
chr6:44233422|44233609 hsa-miR-4504 -2 1 0
chr13:45979813|45979995 hsa-miR-4504 0 1 0
chr4:7031108|7031292 hsa-miR-4504 1 0 0
chr19:44748184|44748334 hsa-miR-4504 1 0 0
chr4:16257917|16258044 hsa-miR-4504 1 0 0
chr14:73964154|73964448 hsa-miR-4504 0 1 0
chr17:75706404|75706632 hsa-miR-4504 0 1 0
chr17:74431704|74431864 hsa-miR-4504 0 1 0
chr3:58135979|58136093 hsa-miR-4504 0 1 0
chr1:114730624|114732732 hsa-miR-4504 0 1 0
chr6:44233452|44233617 hsa-miR-4504 0 1 0
chr16:3142365|3142517 hsa-miR-4504 0 1 0
chr8:142671053|142671189 hsa-miR-4504 0 1 0
chr9:33026565|33026918 hsa-miR-4504 0 1 0
chr6:131281661|131281783 hsa-miR-4504 0 1 0
chr12:7483613|7485141 hsa-miR-4504 0 1 0
chr19:39386122|39386278 hsa-miR-4504 0 1 0
chr1:108699571|108699727 hsa-miR-4504 0 1 0
chr6:44233436|44233617 hsa-miR-4504 0 1 0
chrX:16822684|16822939 hsa-miR-4504 0 1 0
chr7:26667472|26667683 hsa-miR-4504 0 1 0
chr12:76353144|76353294 hsa-miR-4504 0 1 0
chr9:33026813|33026912 hsa-miR-4504 0 1 0
chr6:44233436|44233609 hsa-miR-4504 0 1 0
chr2:162016817|162017155 hsa-miR-4504 0 1 0
chr17:47951612|47951933 hsa-miR-4504 0 1 0
chr3:49675753|49675966 hsa-miR-4504 0 1 0
chr1:10581056|10581192 hsa-miR-4504 0 1 0
chr15:42568681|42568838 hsa-miR-4504 0 1 0
chr14:24439006|24439113 hsa-miR-4504 0 1 0
chr6:42744900|42744989 hsa-miR-4504 0 1 0
chr14:24439032|24439154 hsa-miR-4504 0 1 0
chr5:178226782|178226890 hsa-miR-4504 0 1 0
chr15:89197546|89197712 hsa-miR-4504 0 1 0
chr19:39386161|39386305 hsa-miR-4504 0 1 0
chr7:38723145|38723302 hsa-miR-4504 0 1 0
chr12:56097072|56097200 hsa-miR-4504 0 1 0
chr15:65593460|65593561 hsa-miR-4504 0 1 0
chr18:36786556|36786717 hsa-miR-4504 0 1 0
chr5:131393358|131393630 hsa-miR-4504 0 1 0
chr9:33026581|33026918 hsa-miR-4504 0 1 0
chr15:52133449|52135742 hsa-miR-4504 0 1 0
chr18:80045919|80046088 hsa-miR-4504 0 1 0
chrX:76177778|76177891 hsa-miR-4504 0 1 0
chr10:34382753|34382922 hsa-miR-4504 0 1 0
chr9:136207843|136207969 hsa-miR-4504 0 1 0
chr19:44748192|44748334 hsa-miR-4504 1 0 0
chr1:46278653|46278791 hsa-miR-4504 1 0 0
chr4:52713673|52713814 hsa-miR-4504 1 0 0
chr4:52713655|52713835 hsa-miR-4504 1 0 0
chr6:125261262|125261374 hsa-miR-4504 1 0 0
chr4:52713634|52713775 hsa-miR-4504 1 0 0
chrX:136511751|136511941 hsa-miR-4504 1 0 0
chr1:169853524|169853759 hsa-miR-4504 1 0 0
chrX:136511732|136511939 hsa-miR-4504 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-4504 DDX11 DEAD/H-box helicase 11 HGNC:2736 details
hsa-miR-4504 ZFP36L1 ZFP36 ring finger protein like 1 HGNC:1107 details
hsa-miR-4504 PURB purine rich element binding protein B HGNC:9702 details
hsa-miR-4504 PGAM4 phosphoglycerate mutase family member 4 HGNC:21731 details
hsa-miR-4504 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 HGNC:23077 details
hsa-miR-4504 BICRAL BICRA like chromatin remodeling complex associated protein HGNC:21111 details
hsa-miR-4504 DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 HGNC:3094 details
hsa-miR-4504 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory HGNC:3006 details
hsa-miR-4504 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 HGNC:20363 details
hsa-miR-4504 AKAP11 A-kinase anchoring protein 11 HGNC:369 details
hsa-miR-4504 LARP4B La ribonucleoprotein 4B HGNC:28987 details
hsa-miR-4504 HIC2 HIC ZBTB transcriptional repressor 2 HGNC:18595 details
hsa-miR-4504 COL4A1 collagen type IV alpha 1 chain HGNC:2202 details
hsa-miR-4504 ANKRD33B ankyrin repeat domain 33B HGNC:35240 details
hsa-miR-4504 ZNF708 zinc finger protein 708 HGNC:12945 details
hsa-miR-4504 RFWD3 ring finger and WD repeat domain 3 HGNC:25539 details
hsa-miR-4504 ZNF12 zinc finger protein 12 HGNC:12902 details
hsa-miR-4504 CERS2 ceramide synthase 2 HGNC:14076 details
hsa-miR-4504 WTAP WT1 associated protein HGNC:16846 details
hsa-miR-4504 CNTN4 contactin 4 HGNC:2174 details
hsa-miR-4504 CDC5L cell division cycle 5 like HGNC:1743 details
hsa-miR-4504 ZNF398 zinc finger protein 398 HGNC:18373 details
hsa-miR-4504 RPL28 ribosomal protein L28 HGNC:10330 details
hsa-miR-4504 MDM2 MDM2 proto-oncogene HGNC:6973 details
hsa-miR-4504 CSDE1 cold shock domain containing E1 HGNC:29905 details
hsa-miR-4504 ZNF75A zinc finger protein 75a HGNC:13146 details
hsa-miR-4504 UBE2A ubiquitin conjugating enzyme E2 A HGNC:12472 details
hsa-miR-4504 SUN2 Sad1 and UNC84 domain containing 2 HGNC:14210 details
hsa-miR-4504 FOXG1 forkhead box G1 HGNC:3811 details
hsa-miR-4504 ATXN1 ataxin 1 HGNC:10548 details
hsa-miR-4504 RPS28 ribosomal protein S28 HGNC:10418 details
hsa-miR-4504 OPA3 outer mitochondrial membrane lipid metabolism regulator OPA3 HGNC:8142 details
hsa-miR-4504 RRAS2 RAS related 2 HGNC:17271 details
hsa-miR-4504 GFRA1 GDNF family receptor alpha 1 HGNC:4243 details
hsa-miR-4504 PPY pancreatic polypeptide HGNC:9327 details
hsa-miR-4504 ELOF1 elongation factor 1 HGNC:28691 details
hsa-miR-4504 CASS4 Cas scaffold protein family member 4 HGNC:15878 details
hsa-miR-4504 KIAA0408 KIAA0408 HGNC:21636 details
hsa-miR-4504 ATG2A autophagy related 2A HGNC:29028 details
hsa-miR-4504 AP1S2 adaptor related protein complex 1 subunit sigma 2 HGNC:560 details
hsa-miR-4504 PRDM2 PR/SET domain 2 HGNC:9347 details
hsa-miR-4504 IRX2 iroquois homeobox 2 HGNC:14359 details
hsa-miR-4504 RABGAP1L RAB GTPase activating protein 1 like HGNC:24663 details
hsa-miR-4504 CACNA1B calcium voltage-gated channel subunit alpha1 B HGNC:1389 details
hsa-miR-4504 SMNDC1 survival motor neuron domain containing 1 HGNC:16900 details
hsa-miR-4504 PTPRF protein tyrosine phosphatase receptor type F HGNC:9670 details
hsa-miR-4504 SLFN12L schlafen family member 12 like HGNC:33920 details
hsa-miR-4504 MYPN myopalladin HGNC:23246 details
hsa-miR-4504 KIT KIT proto-oncogene, receptor tyrosine kinase HGNC:6342 details
hsa-miR-4504 PSMD9 proteasome 26S subunit, non-ATPase 9 HGNC:9567 details
hsa-miR-4504 LAX1 lymphocyte transmembrane adaptor 1 HGNC:26005 details
hsa-miR-4504 FOXRED2 FAD dependent oxidoreductase domain containing 2 HGNC:26264 details
hsa-miR-4504 AGMAT agmatinase HGNC:18407 details
hsa-miR-4504 TBPL1 TATA-box binding protein like 1 HGNC:11589 details
hsa-miR-4504 LPCAT1 lysophosphatidylcholine acyltransferase 1 HGNC:25718 details
hsa-miR-4504 IRS2 insulin receptor substrate 2 HGNC:6126 details
hsa-miR-4504 BRWD1 bromodomain and WD repeat domain containing 1 HGNC:12760 details
hsa-miR-4504 RANBP2 RAN binding protein 2 HGNC:9848 details
hsa-miR-4504 TPCN2 two pore segment channel 2 HGNC:20820 details
hsa-miR-4504 INSIG1 insulin induced gene 1 HGNC:6083 details
hsa-miR-4504 details
hsa-miR-4504 FOXK1 forkhead box K1 HGNC:23480 details
hsa-miR-4504 PGAM1 phosphoglycerate mutase 1 HGNC:8888 details
hsa-miR-4504 CDKN1A cyclin dependent kinase inhibitor 1A HGNC:1784 details
hsa-miR-4504 IRAK2 interleukin 1 receptor associated kinase 2 HGNC:6113 details
hsa-miR-4504 MBD3 methyl-CpG binding domain protein 3 HGNC:6918 details
hsa-miR-4504 SASH1 SAM and SH3 domain containing 1 HGNC:19182 details
hsa-miR-4504 SOCS5 suppressor of cytokine signaling 5 HGNC:16852 details
hsa-miR-4504 ZNF716 zinc finger protein 716 HGNC:32458 details
hsa-miR-4504 PNP purine nucleoside phosphorylase HGNC:7892 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab