miRNA Card

miRNA General Information
miRNA ID hsa-miR-4782-3p
Description Homo sapiens miR-4782 stem-loop
Comment None
Experiment Illumina [1]
Sequence UGAUUGUCUUCAUAUCUAGAAC
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr1:36137150|36137286 hsa-miR-4782-3p 0 1 0
chr2:85581603|85581784 hsa-miR-4782-3p 0 1 0
chr2:216673570|216673784 hsa-miR-4782-3p 0 1 0
chr12:57613482|57613760 hsa-miR-4782-3p 0 1 0
chr19:47483502|47483959 hsa-miR-4782-3p 0 1 0
chr11:62516777|62516905 hsa-miR-4782-3p 0 1 0
chr5:109865036|109865146 hsa-miR-4782-3p 0 1 0
chrX:101836266|101836427 hsa-miR-4782-3p 0 1 0
chr6:85511262|85511379 hsa-miR-4782-3p 0 1 0
chr6:349690|349862 hsa-miR-4782-3p 0 1 0
chr22:25194769|25195005 hsa-miR-4782-3p 0 1 0
chr17:58095767|58095955 hsa-miR-4782-3p 1 0 0
chr14:23948074|23948193 hsa-miR-4782-3p 0 1 0
chr11:66844980|66845237 hsa-miR-4782-3p 0 1 0
chr20:17660190|17660294 hsa-miR-4782-3p 0 1 0
chr16:57154242|57154369 hsa-miR-4782-3p 0 1 0
chr10:114121737|114121958 hsa-miR-4782-3p 0 1 0
chr15:59663493|59663652 hsa-miR-4782-3p 0 1 0
chr2:235054407|235054516 hsa-miR-4782-3p 0 1 0
chr19:51826776|51826933 hsa-miR-4782-3p 0 1 0
chr2:85581606|85581876 hsa-miR-4782-3p 0 1 0
chr19:17405391|17405586 hsa-miR-4782-3p 0 1 0
chr2:154709603|154709819 hsa-miR-4782-3p 0 1 0
chr20:46370463|46370525 hsa-miR-4782-3p 0 1 0
chr14:101986608|101986763 hsa-miR-4782-3p 0 1 0
chr2:216673570~216673788 hsa-miR-4782-3p 0 1 0
chr8:93730489~93730639 hsa-miR-4782-3p 0 1 0
chr15:89326724~89326990 hsa-miR-4782-3p 0 1 0
chr1:180975604~180975751 hsa-miR-4782-3p 0 1 0
chr4:102826558~102826699 hsa-miR-4782-3p 0 1 0
chr9:113369631|113369715 hsa-miR-4782-3p 0 1 0
chr11:65873151~65873267 hsa-miR-4782-3p 0 1 0
chr19:12791953~12792152 hsa-miR-4782-3p 0 1 0
chr2:216673570~216673771 hsa-miR-4782-3p 0 1 0
chr11:62516777~62516905 hsa-miR-4782-3p 0 1 0
chr1:229545829~229545925 hsa-miR-4782-3p 0 1 0
chr2:70986668~70986743 hsa-miR-4782-3p 0 1 0
chr17:79998237|79998372 hsa-miR-4782-3p 1 0 0
chr4:73234393|73234528 hsa-miR-4782-3p 0 1 0
chr20:46370443|46371384 hsa-miR-4782-3p 0 1 0
chr3:52292260|52292569 hsa-miR-4782-3p 0 1 0
chrX:53536212|53536455 hsa-miR-4782-3p 0 1 0
chr19:5071400|5071474 hsa-miR-4782-3p 0 1 0
chr6:110210777|110212216 hsa-miR-4782-3p 0 1 0
chr19:1056199|1056402 hsa-miR-4782-3p 0 1 0
chr11:114200597|114200720 hsa-miR-4782-3p 0 1 0
chr19:24050913|24051153 hsa-miR-4782-3p 0 1 0
chr2:20032891|20033067 hsa-miR-4782-3p 0 1 0
chr12:95031349|95031483 hsa-miR-4782-3p 0 1 0
chr4:102826558|102826699 hsa-miR-4782-3p 0 1 0
chr1:2590624|2590739 hsa-miR-4782-3p 0 1 0
chr12:95210879|95211135 hsa-miR-4782-3p 0 1 0
chr18:26856109|26856324 hsa-miR-4782-3p 0 1 0
chr20:17660175|17660321 hsa-miR-4782-3p 0 1 0
chr16:67680963|67681206 hsa-miR-4782-3p 0 1 0
chr8:37860024|37860156 hsa-miR-4782-3p 0 1 0
chr21:36263546|36263814 hsa-miR-4782-3p 0 1 0
chr11:62516727|62516869 hsa-miR-4782-3p 0 1 0
chr13:98474947|98475339 hsa-miR-4782-3p 0 1 0
chr1:2590607|2590698 hsa-miR-4782-3p 0 1 0
chr15:89326724|89326990 hsa-miR-4782-3p 0 1 0
chr18:23506970|23509279 hsa-miR-4782-3p 0 1 0
chr13:49451553|49451909 hsa-miR-4782-3p 0 1 0
chr11:72984088|72989097 hsa-miR-4782-3p 0 1 0
chr2:152671273|152671376 hsa-miR-4782-3p 0 1 0
chr2:85581639|85581784 hsa-miR-4782-3p 0 1 0
chr1:155134253|155134387 hsa-miR-4782-3p 0 1 0
chr1:36137150|36137271 hsa-miR-4782-3p 0 1 0
chr7:150627616|150627850 hsa-miR-4782-3p 0 1 0
chr19:48673316|48673457 hsa-miR-4782-3p 0 1 0
chr17:32941304|32941516 hsa-miR-4782-3p 0 1 0
chr1:180975604|180975732 hsa-miR-4782-3p 0 1 0
chr11:17788063|17788213 hsa-miR-4782-3p 0 1 0
chr1:23360506|23360751 hsa-miR-4782-3p 0 1 0
chr5:96393066|96393165 hsa-miR-4782-3p -6 1 0
chr9:35707368|35707458 hsa-miR-4782-3p -1 1 0
chr11:64174262|64174434 hsa-miR-4782-3p 1 0 0
chr7:44802711|44802845 hsa-miR-4782-3p 0 1 0
chr1:155134282|155134437 hsa-miR-4782-3p 0 1 0
chrX:19084976|19085154 hsa-miR-4782-3p 0 1 0
chr20:17660211|17660321 hsa-miR-4782-3p 0 1 0
chr2:173909879|173910019 hsa-miR-4782-3p 0 1 0
chr1:23360506|23360746 hsa-miR-4782-3p 0 1 0
chr6:159680811|159680896 hsa-miR-4782-3p 0 1 0
chr12:50082126|50082246 hsa-miR-4782-3p 0 1 0
chr1:65434822|65435006 hsa-miR-4782-3p 0 1 0
chr10:114121771|114121958 hsa-miR-4782-3p 0 1 0
chr7:99532397|99532546 hsa-miR-4782-3p 0 1 0
chr5:178226782|178226890 hsa-miR-4782-3p 0 1 0
chr6:11190724|11190862 hsa-miR-4782-3p 0 1 0
chr3:195790941|195791103 hsa-miR-4782-3p 0 1 0
chr20:17660175|17660299 hsa-miR-4782-3p 0 1 0
chr14:69711733|69711993 hsa-miR-4782-3p 0 1 0
chr19:10921050|10921443 hsa-miR-4782-3p 0 1 0
chr11:68392486|68392706 hsa-miR-4782-3p 0 1 0
chr4:11096704|11096795 hsa-miR-4782-3p 0 1 0
chr7:44763391|44764435 hsa-miR-4782-3p 0 1 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-4782-3p USP14 ubiquitin specific peptidase 14 HGNC:12612 details
hsa-miR-4782-3p ZEB2 zinc finger E-box binding homeobox 2 HGNC:14881 details
hsa-miR-4782-3p XIAP X-linked inhibitor of apoptosis HGNC:592 details
hsa-miR-4782-3p SSH2 slingshot protein phosphatase 2 HGNC:30580 details
hsa-miR-4782-3p RPP14 ribonuclease P/MRP subunit p14 HGNC:30327 details
hsa-miR-4782-3p STARD7 StAR related lipid transfer domain containing 7 HGNC:18063 details
hsa-miR-4782-3p MDM4 MDM4 regulator of p53 HGNC:6974 details
hsa-miR-4782-3p UBE2V1 ubiquitin conjugating enzyme E2 V1 HGNC:12494 details
hsa-miR-4782-3p details
hsa-miR-4782-3p details
hsa-miR-4782-3p RASSF8 Ras association domain family member 8 HGNC:13232 details
hsa-miR-4782-3p CHD7 chromodomain helicase DNA binding protein 7 HGNC:20626 details
hsa-miR-4782-3p CLIP2 CAP-Gly domain containing linker protein 2 HGNC:2586 details
hsa-miR-4782-3p MOB4 MOB family member 4, phocein HGNC:17261 details
hsa-miR-4782-3p HSPE1-MOB4 HSPE1-MOB4 readthrough HGNC:49184 details
hsa-miR-4782-3p CEP19 centrosomal protein 19 HGNC:28209 details
hsa-miR-4782-3p ZBTB18 zinc finger and BTB domain containing 18 HGNC:13030 details
hsa-miR-4782-3p SHMT1 serine hydroxymethyltransferase 1 HGNC:10850 details
hsa-miR-4782-3p HMGA2 high mobility group AT-hook 2 HGNC:5009 details
hsa-miR-4782-3p GXYLT1 glucoside xylosyltransferase 1 HGNC:27482 details
hsa-miR-4782-3p BMS1 BMS1 ribosome biogenesis factor HGNC:23505 details
hsa-miR-4782-3p GPR176 G protein-coupled receptor 176 HGNC:32370 details
hsa-miR-4782-3p OIP5 Opa interacting protein 5 HGNC:20300 details
hsa-miR-4782-3p TOR1AIP1 torsin 1A interacting protein 1 HGNC:29456 details
hsa-miR-4782-3p PUM1 pumilio RNA binding family member 1 HGNC:14957 details
hsa-miR-4782-3p C8orf33 chromosome 8 open reading frame 33 HGNC:26104 details
hsa-miR-4782-3p ZNF460 zinc finger protein 460 HGNC:21628 details
hsa-miR-4782-3p ROBO1 roundabout guidance receptor 1 HGNC:10249 details
hsa-miR-4782-3p PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase HGNC:8728 details
hsa-miR-4782-3p FOXC1 forkhead box C1 HGNC:3800 details
hsa-miR-4782-3p QRFPR pyroglutamylated RFamide peptide receptor HGNC:15565 details
hsa-miR-4782-3p NCMAP non-compact myelin associated protein HGNC:29332 details
hsa-miR-4782-3p RPL36A ribosomal protein L36a HGNC:10359 details
hsa-miR-4782-3p LIPC lipase C, hepatic type HGNC:6619 details
hsa-miR-4782-3p CHRM3 cholinergic receptor muscarinic 3 HGNC:1952 details
hsa-miR-4782-3p SATB2 SATB homeobox 2 HGNC:21637 details
hsa-miR-4782-3p RAB30 RAB30, member RAS oncogene family HGNC:9770 details
hsa-miR-4782-3p FLOT2 flotillin 2 HGNC:3758 details
hsa-miR-4782-3p MBNL1 muscleblind like splicing regulator 1 HGNC:6923 details
hsa-miR-4782-3p RDH10 retinol dehydrogenase 10 HGNC:19975 details
hsa-miR-4782-3p ZNF268 zinc finger protein 268 HGNC:13061 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab