miRNA Card

miRNA General Information
miRNA ID hsa-miR-4804-3p
Description Homo sapiens miR-4804 stem-loop
Comment None
Experiment Illumina [1]
Sequence UGCUUAACCUUGCCCUCGAAA
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr14:60796217|60812127 hsa-miR-4804-3p 1 1 1
chr10:26503197|26533525 hsa-miR-4804-3p 1 1 1

Confidence 2 (2 of 3 tools predicted)

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr17:57106375|57106503 hsa-miR-4804-3p 1 0 0
chr10:95312505|95312672 hsa-miR-4804-3p 1 0 0
chr9:126667906|126668086 hsa-miR-4804-3p 1 0 0
chr2:226732055|226732151 hsa-miR-4804-3p 0 1 0
chr14:68789327|68789471 hsa-miR-4804-3p 0 1 0
chr12:6529541|6529850 hsa-miR-4804-3p 0 1 0
chr3:158105072|158105320 hsa-miR-4804-3p 0 1 0
chr14:68789383|68789484 hsa-miR-4804-3p 0 1 0
chr7:32573203|32573349 hsa-miR-4804-3p 0 1 0
chr14:68789396|68789514 hsa-miR-4804-3p 0 1 0
chr14:68789396|68789484 hsa-miR-4804-3p 0 1 0
chr1:71070827|71070990 hsa-miR-4804-3p 1 0 0
chr11:60936196|60936347 hsa-miR-4804-3p 1 0 0
chr13:19647121|19647264 hsa-miR-4804-3p 1 0 0
chr12:57213022|57213150 hsa-miR-4804-3p 1 0 0
chrX:48576211|48576401 hsa-miR-4804-3p 1 0 0
chr20:2657081|2657195 hsa-miR-4804-3p 1 0 0
chr17:58355540|58355647 hsa-miR-4804-3p 1 0 0
chr19:35753139|35753253 hsa-miR-4804-3p 1 0 0
chr17:28605281|28605361 hsa-miR-4804-3p 1 0 0
chr14:68789324|68789514 hsa-miR-4804-3p 0 1 0
chr9:33111072|33111205 hsa-miR-4804-3p 0 1 0
chr1:203340941|203341070 hsa-miR-4804-3p 0 1 0
chr1:203340941|203341057 hsa-miR-4804-3p 0 1 0
chr1:156737413|156737708 hsa-miR-4804-3p 0 1 0
chr10:133370560|133370721 hsa-miR-4804-3p 0 1 0
chr20:51628980|51639478 hsa-miR-4804-3p 0 1 0
chr19:18785965|18786146 hsa-miR-4804-3p 0 1 0
chr16:57460912|57461007 hsa-miR-4804-3p 0 1 0
chr17:78818667|78819951 hsa-miR-4804-3p 0 1 0
chr14:68789377|68789514 hsa-miR-4804-3p 0 1 0
chr3:154256369|154256522 hsa-miR-4804-3p 0 1 0
chr6:39905750~39905941 hsa-miR-4804-3p 0 1 0
chr14:68789327~68789471 hsa-miR-4804-3p 0 1 0
chr9:93543373~93550614 hsa-miR-4804-3p 0 1 0
chr3:46436126~46437972 hsa-miR-4804-3p 0 1 0
chr14:68789396~68789514 hsa-miR-4804-3p 0 1 0
chr22:41346032~41346166 hsa-miR-4804-3p 0 1 0
chr14:104769506~104769733 hsa-miR-4804-3p 0 1 0
chrX:119469745~119469872 hsa-miR-4804-3p 0 1 0
chr2:226732055~226732151 hsa-miR-4804-3p 0 1 0
chr20:45253047~45253147 hsa-miR-4804-3p 0 1 0
chr1:71070827|71070996 hsa-miR-4804-3p 1 0 0
chr9:35698425|35698824 hsa-miR-4804-3p 1 0 0
chr21:36245383|36245673 hsa-miR-4804-3p 0 1 0
chr2:85607718|85607878 hsa-miR-4804-3p 0 1 0
chr11:62766578|62766703 hsa-miR-4804-3p 0 1 0
chr8:47444190|47444366 hsa-miR-4804-3p 1 0 0
chr7:106905519|106905691 hsa-miR-4804-3p 0 1 0
chr16:10932278|10932488 hsa-miR-4804-3p 0 1 0
chr19:3057191|3057324 hsa-miR-4804-3p 0 1 0
chr13:19647106|19647264 hsa-miR-4804-3p 1 0 0
chr19:35752956|35753253 hsa-miR-4804-3p 1 0 0
chr9:128169024|128169141 hsa-miR-4804-3p 1 0 0
chr3:138033235|138033363 hsa-miR-4804-3p 1 0 0
chr19:17582786|17582908 hsa-miR-4804-3p 1 0 0
chr1:203743309|203743415 hsa-miR-4804-3p 1 0 0
chr2:20032891|20033067 hsa-miR-4804-3p 0 1 0
chr16:85675870|85676049 hsa-miR-4804-3p 0 1 0
chr20:45253047|45253147 hsa-miR-4804-3p 0 1 0
chr16:83795415|83795515 hsa-miR-4804-3p 0 1 0
chr14:23058766|23058946 hsa-miR-4804-3p 0 1 0
chr11:119093234|119093401 hsa-miR-4804-3p 0 1 0
chr6:39905641|39905900 hsa-miR-4804-3p 0 1 0
chr12:6529534|6529850 hsa-miR-4804-3p 0 1 0
chr8:11560757|11560944 hsa-miR-4804-3p 0 1 0
chr2:170717181|170717457 hsa-miR-4804-3p 0 1 0
chr1:203340941|203341215 hsa-miR-4804-3p 0 1 0
chr20:4699796|4700054 hsa-miR-4804-3p 0 1 0
chr14:23058803|23059036 hsa-miR-4804-3p 0 1 0
chr2:229798906|229799030 hsa-miR-4804-3p 0 1 0
chr20:45253049|45253147 hsa-miR-4804-3p 0 1 0
chr19:40222849|40223047 hsa-miR-4804-3p 0 1 0
chr20:3805630|3805750 hsa-miR-4804-3p 0 1 0
chr19:3057175|3057367 hsa-miR-4804-3p 0 1 0
chr3:38142340|38142508 hsa-miR-4804-3p 0 1 0
chr10:35569375|35569485 hsa-miR-4804-3p 0 1 0
chr14:68789383|68789503 hsa-miR-4804-3p 0 1 0
chr16:30980564|30980799 hsa-miR-4804-3p 0 1 0
chr4:139103391|139103520 hsa-miR-4804-3p 0 1 0
chr10:87746779|87747145 hsa-miR-4804-3p 0 1 0
chr5:177512342|177512574 hsa-miR-4804-3p 0 1 0
chr1:203340941|203341108 hsa-miR-4804-3p 0 1 0
chr13:77719532|77753358 hsa-miR-4804-3p 0 1 0
chr19:41433164|41433276 hsa-miR-4804-3p 0 1 0
chrX:70432915|70433212 hsa-miR-4804-3p 0 1 0
chr9:113270052|113270174 hsa-miR-4804-3p 0 1 0
chr1:203340941|203341088 hsa-miR-4804-3p 0 1 0
chr14:68789371|68789484 hsa-miR-4804-3p 0 1 0
chr20:3805573|3805757 hsa-miR-4804-3p 0 1 0
chr7:152138278|152138428 hsa-miR-4804-3p 0 1 0
chr14:104769506|104769733 hsa-miR-4804-3p 0 1 0
chrX:119469745|119469907 hsa-miR-4804-3p 0 1 0
chr14:21503551|21503746 hsa-miR-4804-3p 0 1 0
chrX:119469745|119469872 hsa-miR-4804-3p 0 1 0
chr9:93543357|93543475 hsa-miR-4804-3p 0 1 0
chr20:45253034|45253147 hsa-miR-4804-3p -13 1 0
chr2:210455107|210455251 hsa-miR-4804-3p -6 1 0
chrX:48576214|48576377 hsa-miR-4804-3p 1 0 0
chr10:86523562|86523802 hsa-miR-4804-3p 1 0 0
chr13:19647106|19647266 hsa-miR-4804-3p 1 0 0
chr10:128102977|128103248 hsa-miR-4804-3p 1 0 0
chr14:100279459|100279657 hsa-miR-4804-3p 0 1 0
chr16:30004822|30004982 hsa-miR-4804-3p 0 1 0
chr16:85675870|85676034 hsa-miR-4804-3p 0 1 0
chr10:110898397|110898517 hsa-miR-4804-3p 0 1 0
chr1:203340941|203341159 hsa-miR-4804-3p 0 1 0
chr20:41101219|41101353 hsa-miR-4804-3p 0 1 0
chr4:2514633|2514748 hsa-miR-4804-3p 0 1 0
chr14:39181078|39181175 hsa-miR-4804-3p 0 1 0
chr6:149410781|149410945 hsa-miR-4804-3p 0 1 0
chr16:68812174|68812247 hsa-miR-4804-3p 0 1 0
chrX:119469707|119469872 hsa-miR-4804-3p 0 1 0
chr16:11915839|11915948 hsa-miR-4804-3p 0 1 0
chr10:133370560|133370730 hsa-miR-4804-3p 0 1 0
chr9:136474487|136474616 hsa-miR-4804-3p 0 1 0
chr5:151457535|151457602 hsa-miR-4804-3p 1 0 0
chr2:209424102|209424276 hsa-miR-4804-3p 1 0 0
chr7:75988118|75988488 hsa-miR-4804-3p 1 0 0
chr3:111992905|111993131 hsa-miR-4804-3p 1 0 0
chr19:44662622|44662805 hsa-miR-4804-3p 1 0 0
chr3:170111326|170111523 hsa-miR-4804-3p 1 0 0
chr22:30581359|30581621 hsa-miR-4804-3p 1 0 0
chr18:48920526|48920747 hsa-miR-4804-3p 1 0 0
chr20:2657129|2657218 hsa-miR-4804-3p 1 0 0
chr10:26173762|26173924 hsa-miR-4804-3p 1 0 0
chr20:2657110|2657218 hsa-miR-4804-3p 1 0 0
chr12:57213009|57213176 hsa-miR-4804-3p 1 0 0
chr2:190880413|190880625 hsa-miR-4804-3p 1 0 0
chr12:57213009|57213150 hsa-miR-4804-3p 1 0 0
chr10:128103118|128103233 hsa-miR-4804-3p 1 0 0
chr12:112029178|112029344 hsa-miR-4804-3p 1 0 0
chr6:11185427|11185632 hsa-miR-4804-3p 1 0 0
chr12:7438805|7438942 hsa-miR-4804-3p 1 0 0
chr2:209424105|209424276 hsa-miR-4804-3p 1 0 0
chr20:2657126|2657195 hsa-miR-4804-3p 1 0 0
chrX:149480045|149480279 hsa-miR-4804-3p 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-4804-3p GSTCD glutathione S-transferase C-terminal domain containing HGNC:25806 details
hsa-miR-4804-3p ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 HGNC:16036 details
hsa-miR-4804-3p CCDC88C coiled-coil domain containing 88C HGNC:19967 details
hsa-miR-4804-3p RASD2 RASD family member 2 HGNC:18229 details
hsa-miR-4804-3p TP53INP1 tumor protein p53 inducible nuclear protein 1 HGNC:18022 details
hsa-miR-4804-3p ITGA2 integrin subunit alpha 2 HGNC:6137 details
hsa-miR-4804-3p CELF1 CUGBP Elav-like family member 1 HGNC:2549 details
hsa-miR-4804-3p ATAD2 ATPase family AAA domain containing 2 HGNC:30123 details
hsa-miR-4804-3p ZNF669 zinc finger protein 669 HGNC:25736 details
hsa-miR-4804-3p ATP6V0A2 ATPase H+ transporting V0 subunit a2 HGNC:18481 details
hsa-miR-4804-3p CYP8B1 cytochrome P450 family 8 subfamily B member 1 HGNC:2653 details
hsa-miR-4804-3p CTSV cathepsin V HGNC:2538 details
hsa-miR-4804-3p details
hsa-miR-4804-3p ZNF639 zinc finger protein 639 HGNC:30950 details
hsa-miR-4804-3p SPRED1 sprouty related EVH1 domain containing 1 HGNC:20249 details
hsa-miR-4804-3p SLC30A7 solute carrier family 30 member 7 HGNC:19306 details
hsa-miR-4804-3p KLHL11 kelch like family member 11 HGNC:19008 details
hsa-miR-4804-3p COPZ1 COPI coat complex subunit zeta 1 HGNC:2243 details
hsa-miR-4804-3p IL6ST interleukin 6 cytokine family signal transducer HGNC:6021 details
hsa-miR-4804-3p GLDN gliomedin HGNC:29514 details
hsa-miR-4804-3p CDCA7 cell division cycle associated 7 HGNC:14628 details
hsa-miR-4804-3p TRIM67 tripartite motif containing 67 HGNC:31859 details
hsa-miR-4804-3p MTPAP mitochondrial poly(A) polymerase HGNC:25532 details
hsa-miR-4804-3p GALNT8 polypeptide N-acetylgalactosaminyltransferase 8 HGNC:4130 details
hsa-miR-4804-3p ZMAT3 zinc finger matrin-type 3 HGNC:29983 details
hsa-miR-4804-3p RAB8B RAB8B, member RAS oncogene family HGNC:30273 details
hsa-miR-4804-3p ERMP1 endoplasmic reticulum metallopeptidase 1 HGNC:23703 details
hsa-miR-4804-3p LPGAT1 lysophosphatidylglycerol acyltransferase 1 HGNC:28985 details
hsa-miR-4804-3p ARL8A ADP ribosylation factor like GTPase 8A HGNC:25192 details
hsa-miR-4804-3p MFAP3 microfibril associated protein 3 HGNC:7034 details
hsa-miR-4804-3p AHI1 Abelson helper integration site 1 HGNC:21575 details
hsa-miR-4804-3p VAT1 vesicle amine transport 1 HGNC:16919 details
hsa-miR-4804-3p TFAP4 transcription factor AP-4 HGNC:11745 details
hsa-miR-4804-3p SAMD12 sterile alpha motif domain containing 12 HGNC:31750 details
hsa-miR-4804-3p RRN3 RRN3 homolog, RNA polymerase I transcription factor HGNC:30346 details
hsa-miR-4804-3p RREB1 ras responsive element binding protein 1 HGNC:10449 details
hsa-miR-4804-3p PRRC1 proline rich coiled-coil 1 HGNC:28164 details
hsa-miR-4804-3p PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 HGNC:9377 details
hsa-miR-4804-3p LNPEP leucyl and cystinyl aminopeptidase HGNC:6656 details
hsa-miR-4804-3p EIF2S1 eukaryotic translation initiation factor 2 subunit alpha HGNC:3265 details
hsa-miR-4804-3p JUN Jun proto-oncogene, AP-1 transcription factor subunit HGNC:6204 details
hsa-miR-4804-3p SRSF10 serine and arginine rich splicing factor 10 HGNC:16713 details
hsa-miR-4804-3p MAP3K21 mitogen-activated protein kinase kinase kinase 21 HGNC:29798 details
hsa-miR-4804-3p EXOC8 exocyst complex component 8 HGNC:24659 details
hsa-miR-4804-3p ZBTB25 zinc finger and BTB domain containing 25 HGNC:13112 details
hsa-miR-4804-3p FPR3 formyl peptide receptor 3 HGNC:3828 details
hsa-miR-4804-3p PDCD4 programmed cell death 4 HGNC:8763 details
hsa-miR-4804-3p SLFN12L schlafen family member 12 like HGNC:33920 details
hsa-miR-4804-3p TMEM33 transmembrane protein 33 HGNC:25541 details
hsa-miR-4804-3p UTP15 UTP15 small subunit processome component HGNC:25758 details
hsa-miR-4804-3p STAT3 signal transducer and activator of transcription 3 HGNC:11364 details
hsa-miR-4804-3p TMEM70 transmembrane protein 70 HGNC:26050 details
hsa-miR-4804-3p PDS5A PDS5 cohesin associated factor A HGNC:29088 details
hsa-miR-4804-3p CCND1 cyclin D1 HGNC:1582 details
hsa-miR-4804-3p HMGA2 high mobility group AT-hook 2 HGNC:5009 details
hsa-miR-4804-3p B2M beta-2-microglobulin HGNC:914 details
hsa-miR-4804-3p KLF12 Kruppel like factor 12 HGNC:6346 details
hsa-miR-4804-3p LRCH3 leucine rich repeats and calponin homology domain containing 3 HGNC:28637 details
hsa-miR-4804-3p NUDT7 nudix hydrolase 7 HGNC:8054 details
hsa-miR-4804-3p RAP1GAP2 RAP1 GTPase activating protein 2 HGNC:29176 details
hsa-miR-4804-3p RPRD1A regulation of nuclear pre-mRNA domain containing 1A HGNC:25560 details
hsa-miR-4804-3p FGF23 fibroblast growth factor 23 HGNC:3680 details
hsa-miR-4804-3p SON SON DNA and RNA binding protein HGNC:11183 details
hsa-miR-4804-3p AFF2 AF4/FMR2 family member 2 HGNC:3776 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab