miRNA Card

miRNA General Information
miRNA ID hsa-miR-548ai
Description Homo sapiens miR-548ai stem-loop
Comment None
Experiment Illumina [1]
Sequence AAAGGUAAUUGCAGUUUUUCCC
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr5:154816323|154816494 hsa-miR-548ai 1 1 0
chr4:123930430|123930553 hsa-miR-548ai 1 1 0

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr19:46608556|46608923 hsa-miR-548ai 0 1 0
chr6:31766640|31766920 hsa-miR-548ai 0 1 0
chr19:46608545|46608923 hsa-miR-548ai 0 1 0
chr19:6416738|6416830 hsa-miR-548ai 0 1 0
chr2:188999349|188999545 hsa-miR-548ai 0 1 0
chr1:153972783|153972995 hsa-miR-548ai 0 1 0
chr19:46608528|46608923 hsa-miR-548ai 0 1 0
chr8:99892666|99892808 hsa-miR-548ai 0 1 0
chr4:107895722|107895884 hsa-miR-548ai 0 1 0
chr19:6416738|6416824 hsa-miR-548ai 0 1 0
chr19:46608553|46608923 hsa-miR-548ai 0 1 0
chr2:188999331|188999545 hsa-miR-548ai 0 1 0
chr19:46608568|46608923 hsa-miR-548ai 0 1 0
chr1:153972777|153973054 hsa-miR-548ai 0 1 0
chr8:69659291|69659424 hsa-miR-548ai 0 1 0
chr10:89333822|89333912 hsa-miR-548ai 0 1 0
chr2:75717883|75718208 hsa-miR-548ai 0 1 0
chr17:65013595|65013739 hsa-miR-548ai 0 1 0
chr1:153972802|153973054 hsa-miR-548ai 0 1 0
chr12:112508268|112508403 hsa-miR-548ai 0 1 0
chr2:188999285|188999577 hsa-miR-548ai 0 1 0
chr19:46608566|46608923 hsa-miR-548ai 0 1 0
chr1:153972798|153973054 hsa-miR-548ai 0 1 0
chr12:123743843|123744219 hsa-miR-548ai 0 1 0
chr7:92399876|92400018 hsa-miR-548ai 0 1 0
chr2:188999349|188999569 hsa-miR-548ai 0 1 0
chr19:46608559|46608923 hsa-miR-548ai 0 1 0
chr19:46608549|46608923 hsa-miR-548ai 0 1 0
chr12:112508268|112508408 hsa-miR-548ai 0 1 0
chr3:121693741|121693913 hsa-miR-548ai 0 1 0
chr20:32193224|32193405 hsa-miR-548ai 0 1 0
chr1:154550341|154550459 hsa-miR-548ai 0 1 0
chr13:98420518|98420817 hsa-miR-548ai 0 1 0
chr3:65452922|65453178 hsa-miR-548ai 0 1 0
chr12:120579108|120579200 hsa-miR-548ai 0 1 0
chr19:46608532|46608923 hsa-miR-548ai 0 1 0
chr19:46608538|46608923 hsa-miR-548ai 0 1 0
chr2:188999340|188999545 hsa-miR-548ai 0 1 0
chr17:35266614|35266725 hsa-miR-548ai 0 1 0
chr2:188999347|188999545 hsa-miR-548ai 0 1 0
chr2:188999285~188999577 hsa-miR-548ai 0 1 0
chr19:46608566~46608923 hsa-miR-548ai 0 1 0
chr19:46608556~46608923 hsa-miR-548ai 0 1 0
chr14:105389238|105389354 hsa-miR-548ai 0 1 0
chr12:57820260~57820432 hsa-miR-548ai 0 1 0
chr2:27650216|27650383 hsa-miR-548ai 0 1 0
chr4:108024774~108024867 hsa-miR-548ai 0 1 0
chr2:27650249|27650383 hsa-miR-548ai 0 1 0
chr19:46608559~46608923 hsa-miR-548ai 0 1 0
chr2:188999285~188999545 hsa-miR-548ai 0 1 0
chr19:6416738~6416830 hsa-miR-548ai 0 1 0
chr17:1675650~1675944 hsa-miR-548ai 0 1 0
chr15:71411687~71411823 hsa-miR-548ai 0 1 0
chr19:46608553~46608923 hsa-miR-548ai 0 1 0
chr15:52549949~52550050 hsa-miR-548ai 0 1 0
chr9:19027797~19028045 hsa-miR-548ai 0 1 0
chr2:27650206|27650383 hsa-miR-548ai 0 1 0
chr10:58395461|58395589 hsa-miR-548ai 0 1 0
chr2:188999349~188999569 hsa-miR-548ai 0 1 0
chr19:46608549~46608923 hsa-miR-548ai 0 1 0
chr17:35724091|35724216 hsa-miR-548ai 0 1 0
chr11:94549285|94549567 hsa-miR-548ai 1 0 0
chr3:121693741|121693976 hsa-miR-548ai 0 1 0
chr4:75649427|75649591 hsa-miR-548ai 0 1 0
chr22:31907186|31907369 hsa-miR-548ai 0 1 0
chr12:2799875|2800122 hsa-miR-548ai 0 1 0
chr9:134437217|134437298 hsa-miR-548ai 0 1 0
chr20:36785567|36785798 hsa-miR-548ai 0 1 0
chr11:6682861|6683040 hsa-miR-548ai 0 1 0
chr17:4465202|4465335 hsa-miR-548ai 0 1 0
chr15:41507215|41507605 hsa-miR-548ai 0 1 0
chr1:155514292|155514473 hsa-miR-548ai 0 1 0
chr1:109236681|109236870 hsa-miR-548ai 0 1 0
chr12:112508291|112508403 hsa-miR-548ai 0 1 0
chr1:156219263|156219468 hsa-miR-548ai 0 1 0
chr9:134428355|134428507 hsa-miR-548ai 0 1 0
chr20:35899234|35899403 hsa-miR-548ai 0 1 0
chr17:40093353|40093457 hsa-miR-548ai 1 0 0
chr6:75084655|75084861 hsa-miR-548ai 1 0 0
chr16:2602030|2602238 hsa-miR-548ai 1 0 0
chr20:59847261|59847466 hsa-miR-548ai 0 1 0
chr20:50317237|50317429 hsa-miR-548ai 0 1 0
chr12:57820299|57820432 hsa-miR-548ai 0 1 0
chr12:50978948|50979082 hsa-miR-548ai 0 1 0
chr1:62210210|62210355 hsa-miR-548ai 0 1 0
chr17:42333673|42333928 hsa-miR-548ai 0 1 0
chr10:27142387|27145590 hsa-miR-548ai 0 1 0
chr14:102030189|102030282 hsa-miR-548ai 0 1 0
chr3:4658173|4658278 hsa-miR-548ai 0 1 0
chr8:69659291|69659468 hsa-miR-548ai 0 1 0
chr12:57820260|57820432 hsa-miR-548ai 0 1 0
chr1:206939343|206939463 hsa-miR-548ai 0 1 0
chr12:88494685|88494825 hsa-miR-548ai 0 1 0
chr17:42333696|42333923 hsa-miR-548ai 0 1 0
chr7:132129915|132130092 hsa-miR-548ai 0 1 0
chr17:42333673|42333963 hsa-miR-548ai 0 1 0
chr19:45632888|45633096 hsa-miR-548ai 0 1 0
chr10:123690702|123690812 hsa-miR-548ai 0 1 0
chr6:159679711|159679842 hsa-miR-548ai 0 1 0
chr1:151364926|151365254 hsa-miR-548ai 0 1 0
chr4:165484527|165487512 hsa-miR-548ai -15 1 0
chr11:18281907|18281996 hsa-miR-548ai -7 1 0
chr3:5219229|5219440 hsa-miR-548ai -8 1 0
chr1:39412067|39412212 hsa-miR-548ai 0 1 0
chr2:188999355|188999554 hsa-miR-548ai 0 1 0
chr16:66613046|66613248 hsa-miR-548ai 0 1 0
chr1:206939228|206939428 hsa-miR-548ai 0 1 0
chrX:123905515|123905652 hsa-miR-548ai 0 1 0
chr19:55660182|55660578 hsa-miR-548ai 0 1 0
chr8:69659275|69659468 hsa-miR-548ai 0 1 0
chr1:182887421|182887554 hsa-miR-548ai 0 1 0
chr1:206939349|206939428 hsa-miR-548ai 0 1 0
chr2:188999285|188999506 hsa-miR-548ai 0 1 0
chr9:94606843|94606952 hsa-miR-548ai 0 1 0
chr20:32193246|32193405 hsa-miR-548ai 0 1 0
chr1:151364974|151365250 hsa-miR-548ai 0 1 0
chr1:154550345|154550457 hsa-miR-548ai 0 1 0
chr1:220780018|220780239 hsa-miR-548ai 0 1 0
chr10:1019682|1019857 hsa-miR-548ai 0 1 0
chr9:131584333|131584559 hsa-miR-548ai 0 1 0
chr2:27650255|27650383 hsa-miR-548ai 0 1 0
chr2:238245763|238245991 hsa-miR-548ai 1 0 0
chr1:81986752|81986978 hsa-miR-548ai 1 0 0
chr10:124835021|124835130 hsa-miR-548ai 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-548ai SLC38A1 solute carrier family 38 member 1 HGNC:13447 details
hsa-miR-548ai PURB purine rich element binding protein B HGNC:9702 details
hsa-miR-548ai PEX2 peroxisomal biogenesis factor 2 HGNC:9717 details
hsa-miR-548ai MRPL3 mitochondrial ribosomal protein L3 HGNC:10379 details
hsa-miR-548ai HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 HGNC:5194 details
hsa-miR-548ai PCDH9 protocadherin 9 HGNC:8661 details
hsa-miR-548ai PLA2G2F phospholipase A2 group IIF HGNC:30040 details
hsa-miR-548ai NUP155 nucleoporin 155 HGNC:8063 details
hsa-miR-548ai VMA21 vacuolar ATPase assembly factor VMA21 HGNC:22082 details
hsa-miR-548ai CAVIN1 caveolae associated protein 1 HGNC:9688 details
hsa-miR-548ai LATS2 large tumor suppressor kinase 2 HGNC:6515 details
hsa-miR-548ai KREMEN1 kringle containing transmembrane protein 1 HGNC:17550 details
hsa-miR-548ai GID4 GID complex subunit 4 homolog HGNC:28453 details
hsa-miR-548ai FYTTD1 forty-two-three domain containing 1 HGNC:25407 details
hsa-miR-548ai FBXW7 F-box and WD repeat domain containing 7 HGNC:16712 details
hsa-miR-548ai CDKN1B cyclin dependent kinase inhibitor 1B HGNC:1785 details
hsa-miR-548ai AKIRIN1 akirin 1 HGNC:25744 details
hsa-miR-548ai BICD2 BICD cargo adaptor 2 HGNC:17208 details
hsa-miR-548ai ABCB7 ATP binding cassette subfamily B member 7 HGNC:48 details
hsa-miR-548ai SVOP SV2 related protein HGNC:25417 details
hsa-miR-548ai PSMD7 proteasome 26S subunit, non-ATPase 7 HGNC:9565 details
hsa-miR-548ai PLEKHA1 pleckstrin homology domain containing A1 HGNC:14335 details
hsa-miR-548ai TOMM5 translocase of outer mitochondrial membrane 5 HGNC:31369 details
hsa-miR-548ai MAP3K21 mitogen-activated protein kinase kinase kinase 21 HGNC:29798 details
hsa-miR-548ai PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A HGNC:9275 details
hsa-miR-548ai PSMG2 proteasome assembly chaperone 2 HGNC:24929 details
hsa-miR-548ai NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 HGNC:23987 details
hsa-miR-548ai ZNF253 zinc finger protein 253 HGNC:13497 details
hsa-miR-548ai SNTB2 syntrophin beta 2 HGNC:11169 details
hsa-miR-548ai MCMBP minichromosome maintenance complex binding protein HGNC:25782 details
hsa-miR-548ai CLCN3 chloride voltage-gated channel 3 HGNC:2021 details
hsa-miR-548ai ANXA11 annexin A11 HGNC:535 details
hsa-miR-548ai ARHGAP11A Rho GTPase activating protein 11A HGNC:15783 details
hsa-miR-548ai NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 HGNC:29923 details
hsa-miR-548ai LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 HGNC:15606 details
hsa-miR-548ai CSNK2A1 casein kinase 2 alpha 1 HGNC:2457 details
hsa-miR-548ai SLC5A3 solute carrier family 5 member 3 HGNC:11038 details
hsa-miR-548ai PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 HGNC:9108 details
hsa-miR-548ai LCOR ligand dependent nuclear receptor corepressor HGNC:29503 details
hsa-miR-548ai ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 HGNC:13717 details
hsa-miR-548ai ELOVL5 ELOVL fatty acid elongase 5 HGNC:21308 details
hsa-miR-548ai CRNKL1 crooked neck pre-mRNA splicing factor 1 HGNC:15762 details
hsa-miR-548ai ARID5B AT-rich interaction domain 5B HGNC:17362 details
hsa-miR-548ai ZNF260 zinc finger protein 260 HGNC:13499 details
hsa-miR-548ai ZNF138 zinc finger protein 138 HGNC:12922 details
hsa-miR-548ai PRUNE2 prune homolog 2 with BCH domain HGNC:25209 details
hsa-miR-548ai PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 HGNC:30483 details
hsa-miR-548ai PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase HGNC:8728 details
hsa-miR-548ai IREB2 iron responsive element binding protein 2 HGNC:6115 details
hsa-miR-548ai HOXA3 homeobox A3 HGNC:5104 details
hsa-miR-548ai details
hsa-miR-548ai CDCA4 cell division cycle associated 4 HGNC:14625 details
hsa-miR-548ai CBFB core-binding factor subunit beta HGNC:1539 details
hsa-miR-548ai CALM1 calmodulin 1 HGNC:1442 details
hsa-miR-548ai C5orf51 chromosome 5 open reading frame 51 HGNC:27750 details
hsa-miR-548ai ABHD2 abhydrolase domain containing 2, acylglycerol lipase HGNC:18717 details
hsa-miR-548ai PAWR pro-apoptotic WT1 regulator HGNC:8614 details
hsa-miR-548ai SPIN4 spindlin family member 4 HGNC:27040 details
hsa-miR-548ai SECISBP2L SECIS binding protein 2 like HGNC:28997 details
hsa-miR-548ai ADO 2-aminoethanethiol dioxygenase HGNC:23506 details
hsa-miR-548ai ACVR2A activin A receptor type 2A HGNC:173 details
hsa-miR-548ai FTH1 ferritin heavy chain 1 HGNC:3976 details
hsa-miR-548ai EEF1B2 eukaryotic translation elongation factor 1 beta 2 HGNC:3208 details
hsa-miR-548ai details
hsa-miR-548ai PARP2 poly(ADP-ribose) polymerase 2 HGNC:272 details
hsa-miR-548ai PCDH17 protocadherin 17 HGNC:14267 details
hsa-miR-548ai MRO maestro HGNC:24121 details
hsa-miR-548ai SLC7A5 solute carrier family 7 member 5 HGNC:11063 details
hsa-miR-548ai IPO7 importin 7 HGNC:9852 details
hsa-miR-548ai SPRYD4 SPRY domain containing 4 HGNC:27468 details
hsa-miR-548ai KPNA4 karyopherin subunit alpha 4 HGNC:6397 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab