miRNA Card

miRNA General Information
miRNA ID hsa-miR-548av-5p
Description Homo sapiens miR-548av stem-loop
Comment None
Experiment
Sequence AAAAGUACUUGCGGAUUU
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-548av-5p ZNRF2 zinc and ring finger 2 HGNC:22316 details
hsa-miR-548av-5p GTF2H5 general transcription factor IIH subunit 5 HGNC:21157 details
hsa-miR-548av-5p ZDHHC21 zinc finger DHHC-type palmitoyltransferase 21 HGNC:20750 details
hsa-miR-548av-5p RLN2 relaxin 2 HGNC:10027 details
hsa-miR-548av-5p ZNF562 zinc finger protein 562 HGNC:25950 details
hsa-miR-548av-5p MRPS5 mitochondrial ribosomal protein S5 HGNC:14498 details
hsa-miR-548av-5p details
hsa-miR-548av-5p FEM1C fem-1 homolog C HGNC:16933 details
hsa-miR-548av-5p VSNL1 visinin like 1 HGNC:12722 details
hsa-miR-548av-5p SAMD8 sterile alpha motif domain containing 8 HGNC:26320 details
hsa-miR-548av-5p SEM1 SEM1 26S proteasome subunit HGNC:10845 details
hsa-miR-548av-5p XRCC6 X-ray repair cross complementing 6 HGNC:4055 details
hsa-miR-548av-5p TAF12 TATA-box binding protein associated factor 12 HGNC:11545 details
hsa-miR-548av-5p KIF2C kinesin family member 2C HGNC:6393 details
hsa-miR-548av-5p SNRNP27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 HGNC:30240 details
hsa-miR-548av-5p YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon HGNC:12851 details
hsa-miR-548av-5p SMAD5 SMAD family member 5 HGNC:6771 details
hsa-miR-548av-5p CDK6 cyclin dependent kinase 6 HGNC:1777 details
hsa-miR-548av-5p details
hsa-miR-548av-5p ALG9 ALG9 alpha-1,2-mannosyltransferase HGNC:15672 details
hsa-miR-548av-5p ERH ERH mRNA splicing and mitosis factor HGNC:3447 details
hsa-miR-548av-5p FAM3C FAM3 metabolism regulating signaling molecule C HGNC:18664 details
hsa-miR-548av-5p ZFYVE21 zinc finger FYVE-type containing 21 HGNC:20760 details
hsa-miR-548av-5p MDFIC MyoD family inhibitor domain containing HGNC:28870 details
hsa-miR-548av-5p IL6ST interleukin 6 cytokine family signal transducer HGNC:6021 details
hsa-miR-548av-5p CEP120 centrosomal protein 120 HGNC:26690 details
hsa-miR-548av-5p ZBTB20 zinc finger and BTB domain containing 20 HGNC:13503 details
hsa-miR-548av-5p TMEM30B transmembrane protein 30B HGNC:27254 details
hsa-miR-548av-5p SPPL2A signal peptide peptidase like 2A HGNC:30227 details
hsa-miR-548av-5p CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 HGNC:1488 details
hsa-miR-548av-5p ZNF711 zinc finger protein 711 HGNC:13128 details
hsa-miR-548av-5p YOD1 YOD1 deubiquitinase HGNC:25035 details
hsa-miR-548av-5p details
hsa-miR-548av-5p MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase HGNC:7434 details
hsa-miR-548av-5p CAMSAP2 calmodulin regulated spectrin associated protein family member 2 HGNC:29188 details
hsa-miR-548av-5p NPM3 nucleophosmin/nucleoplasmin 3 HGNC:7931 details
hsa-miR-548av-5p TRIM73 tripartite motif containing 73 HGNC:18162 details
hsa-miR-548av-5p TRIM74 tripartite motif containing 74 HGNC:17453 details
hsa-miR-548av-5p A1CF APOBEC1 complementation factor HGNC:24086 details
hsa-miR-548av-5p CYP20A1 cytochrome P450 family 20 subfamily A member 1 HGNC:20576 details
hsa-miR-548av-5p BRIX1 biogenesis of ribosomes BRX1 HGNC:24170 details
hsa-miR-548av-5p ACTN4 actinin alpha 4 HGNC:166 details
hsa-miR-548av-5p SHISA9 shisa family member 9 HGNC:37231 details
hsa-miR-548av-5p ARL13B ADP ribosylation factor like GTPase 13B HGNC:25419 details
hsa-miR-548av-5p TMEM41B transmembrane protein 41B HGNC:28948 details
hsa-miR-548av-5p TRAF3IP1 TRAF3 interacting protein 1 HGNC:17861 details
hsa-miR-548av-5p RAB32 RAB32, member RAS oncogene family HGNC:9772 details
hsa-miR-548av-5p SLC9A4 solute carrier family 9 member A4 HGNC:11077 details
hsa-miR-548av-5p TWF1 twinfilin actin binding protein 1 HGNC:9620 details
hsa-miR-548av-5p STX7 syntaxin 7 HGNC:11442 details
hsa-miR-548av-5p SKIL SKI like proto-oncogene HGNC:10897 details
hsa-miR-548av-5p SAR1B secretion associated Ras related GTPase 1B HGNC:10535 details
hsa-miR-548av-5p PYGO1 pygopus family PHD finger 1 HGNC:30256 details
hsa-miR-548av-5p PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 HGNC:8575 details
hsa-miR-548av-5p GDE1 glycerophosphodiester phosphodiesterase 1 HGNC:29644 details
hsa-miR-548av-5p GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 HGNC:4129 details
hsa-miR-548av-5p ETNK1 ethanolamine kinase 1 HGNC:24649 details
hsa-miR-548av-5p EFNA5 ephrin A5 HGNC:3225 details
hsa-miR-548av-5p CSE1L chromosome segregation 1 like HGNC:2431 details
hsa-miR-548av-5p ANP32E acidic nuclear phosphoprotein 32 family member E HGNC:16673 details
hsa-miR-548av-5p CDC5L cell division cycle 5 like HGNC:1743 details
hsa-miR-548av-5p CCND1 cyclin D1 HGNC:1582 details
hsa-miR-548av-5p SPCS3 signal peptidase complex subunit 3 HGNC:26212 details
hsa-miR-548av-5p PARP15 poly(ADP-ribose) polymerase family member 15 HGNC:26876 details
hsa-miR-548av-5p XKR9 XK related 9 HGNC:20937 details
hsa-miR-548av-5p ESYT1 extended synaptotagmin 1 HGNC:29534 details
hsa-miR-548av-5p KLRC3 killer cell lectin like receptor C3 HGNC:6376 details
hsa-miR-548av-5p SH3BGRL SH3 domain binding glutamate rich protein like HGNC:10823 details
hsa-miR-548av-5p ANGPTL3 angiopoietin like 3 HGNC:491 details
hsa-miR-548av-5p ACSM2B acyl-CoA synthetase medium chain family member 2B HGNC:30931 details
hsa-miR-548av-5p PRELID1 PRELI domain containing 1 HGNC:30255 details
hsa-miR-548av-5p SPC25 SPC25 component of NDC80 kinetochore complex HGNC:24031 details
hsa-miR-548av-5p LIN7C lin-7 homolog C, crumbs cell polarity complex component HGNC:17789 details
hsa-miR-548av-5p GIMAP4 GTPase, IMAP family member 4 HGNC:21872 details
hsa-miR-548av-5p PTP4A1 protein tyrosine phosphatase 4A1 HGNC:9634 details
hsa-miR-548av-5p PNISR PNN interacting serine and arginine rich protein HGNC:21222 details
hsa-miR-548av-5p KATNAL1 katanin catalytic subunit A1 like 1 HGNC:28361 details
hsa-miR-548av-5p HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 HGNC:5030 details
hsa-miR-548av-5p FOXN2 forkhead box N2 HGNC:5281 details
hsa-miR-548av-5p CHD1 chromodomain helicase DNA binding protein 1 HGNC:1915 details
hsa-miR-548av-5p CD164 CD164 molecule HGNC:1632 details
hsa-miR-548av-5p ATXN1L ataxin 1 like HGNC:33279 details
hsa-miR-548av-5p MRPS30 mitochondrial ribosomal protein S30 HGNC:8769 details
hsa-miR-548av-5p TMEM241 transmembrane protein 241 HGNC:31723 details
hsa-miR-548av-5p MKLN1 muskelin 1 HGNC:7109 details
hsa-miR-548av-5p MED21 mediator complex subunit 21 HGNC:11473 details
hsa-miR-548av-5p YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta HGNC:12855 details
hsa-miR-548av-5p XIAP X-linked inhibitor of apoptosis HGNC:592 details
hsa-miR-548av-5p WNK3 WNK lysine deficient protein kinase 3 HGNC:14543 details
hsa-miR-548av-5p UBE2H ubiquitin conjugating enzyme E2 H HGNC:12484 details
hsa-miR-548av-5p RGPD4 RANBP2 like and GRIP domain containing 4 HGNC:32417 details
hsa-miR-548av-5p LIPA lipase A, lysosomal acid type HGNC:6617 details
hsa-miR-548av-5p LAMC1 laminin subunit gamma 1 HGNC:6492 details
hsa-miR-548av-5p HPRT1 hypoxanthine phosphoribosyltransferase 1 HGNC:5157 details
hsa-miR-548av-5p ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 HGNC:13717 details
hsa-miR-548av-5p CRCP CGRP receptor component HGNC:17888 details
hsa-miR-548av-5p details
hsa-miR-548av-5p YAP1 Yes1 associated transcriptional regulator HGNC:16262 details
hsa-miR-548av-5p ZBTB43 zinc finger and BTB domain containing 43 HGNC:17908 details
hsa-miR-548av-5p MFSD9 major facilitator superfamily domain containing 9 HGNC:28158 details
hsa-miR-548av-5p TNIP2 TNFAIP3 interacting protein 2 HGNC:19118 details
hsa-miR-548av-5p BBS10 Bardet-Biedl syndrome 10 HGNC:26291 details
hsa-miR-548av-5p KIF3A kinesin family member 3A HGNC:6319 details
hsa-miR-548av-5p KIAA1586 KIAA1586 HGNC:21360 details
hsa-miR-548av-5p YTHDF1 YTH N6-methyladenosine RNA binding protein 1 HGNC:15867 details
hsa-miR-548av-5p REV3L REV3 like, DNA directed polymerase zeta catalytic subunit HGNC:9968 details
hsa-miR-548av-5p RCC2 regulator of chromosome condensation 2 HGNC:30297 details
hsa-miR-548av-5p LEPROT leptin receptor overlapping transcript HGNC:29477 details
hsa-miR-548av-5p HSP90AA1 heat shock protein 90 alpha family class A member 1 HGNC:5253 details
hsa-miR-548av-5p HNRNPAB heterogeneous nuclear ribonucleoprotein A/B HGNC:5034 details
hsa-miR-548av-5p FOXK1 forkhead box K1 HGNC:23480 details
hsa-miR-548av-5p FEN1 flap structure-specific endonuclease 1 HGNC:3650 details
hsa-miR-548av-5p BACH1 BTB domain and CNC homolog 1 HGNC:935 details
hsa-miR-548av-5p ZNF284 zinc finger protein 284 HGNC:13078 details
hsa-miR-548av-5p YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta HGNC:12854 details
hsa-miR-548av-5p ZNF724 zinc finger protein 724 HGNC:32460 details
hsa-miR-548av-5p MAP2K1 mitogen-activated protein kinase kinase 1 HGNC:6840 details
hsa-miR-548av-5p FLVCR1 FLVCR heme transporter 1 HGNC:24682 details
hsa-miR-548av-5p SMIM15 small integral membrane protein 15 HGNC:33861 details
hsa-miR-548av-5p ASCC1 activating signal cointegrator 1 complex subunit 1 HGNC:24268 details
hsa-miR-548av-5p PRKG2 protein kinase cGMP-dependent 2 HGNC:9416 details
hsa-miR-548av-5p PLEKHG7 pleckstrin homology and RhoGEF domain containing G7 HGNC:33829 details
hsa-miR-548av-5p CTCFL CCCTC-binding factor like HGNC:16234 details
hsa-miR-548av-5p CARHSP1 calcium regulated heat stable protein 1 HGNC:17150 details
hsa-miR-548av-5p LYRM2 LYR motif containing 2 HGNC:25229 details
hsa-miR-548av-5p CEP68 centrosomal protein 68 HGNC:29076 details
hsa-miR-548av-5p EMC7 ER membrane protein complex subunit 7 HGNC:24301 details
hsa-miR-548av-5p AGO2 argonaute RISC catalytic component 2 HGNC:3263 details
hsa-miR-548av-5p DNAJC3 DnaJ heat shock protein family (Hsp40) member C3 HGNC:9439 details
hsa-miR-548av-5p CPS1 carbamoyl-phosphate synthase 1 HGNC:2323 details
hsa-miR-548av-5p CD300LG CD300 molecule like family member g HGNC:30455 details
hsa-miR-548av-5p PCGF5 polycomb group ring finger 5 HGNC:28264 details
hsa-miR-548av-5p HERPUD2 HERPUD family member 2 HGNC:21915 details
hsa-miR-548av-5p EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 HGNC:16787 details
hsa-miR-548av-5p details
hsa-miR-548av-5p TARDBP TAR DNA binding protein HGNC:11571 details
hsa-miR-548av-5p CRIPT CXXC repeat containing interactor of PDZ3 domain HGNC:14312 details
hsa-miR-548av-5p PDE12 phosphodiesterase 12 HGNC:25386 details
hsa-miR-548av-5p RYBP RING1 and YY1 binding protein HGNC:10480 details
hsa-miR-548av-5p TBL3 transducin beta like 3 HGNC:11587 details
hsa-miR-548av-5p ZBTB37 zinc finger and BTB domain containing 37 HGNC:28365 details
hsa-miR-548av-5p SETD7 SET domain containing 7, histone lysine methyltransferase HGNC:30412 details
hsa-miR-548av-5p SDAD1 SDA1 domain containing 1 HGNC:25537 details
hsa-miR-548av-5p NACC2 NACC family member 2 HGNC:23846 details
hsa-miR-548av-5p UHMK1 U2AF homology motif kinase 1 HGNC:19683 details
hsa-miR-548av-5p CD47 CD47 molecule HGNC:1682 details
hsa-miR-548av-5p CDKL2 cyclin dependent kinase like 2 HGNC:1782 details
hsa-miR-548av-5p MGAT1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase HGNC:7044 details
hsa-miR-548av-5p TPRA1 transmembrane protein adipocyte associated 1 HGNC:30413 details
hsa-miR-548av-5p AKAP11 A-kinase anchoring protein 11 HGNC:369 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab