miRNA Card

miRNA General Information
miRNA ID hsa-miR-5579-3p
Description Homo sapiens miR-5579 stem-loop
Comment None
Experiment
Sequence UUAGCUUAAGGAGUACCAGAUC
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr19:41771178|41771292 hsa-miR-5579-3p 0 1 0
chr19:16133432|16133570 hsa-miR-5579-3p 0 1 0
chr2:127528315|127528529 hsa-miR-5579-3p 0 1 0
chr4:76144266|76144434 hsa-miR-5579-3p 0 1 0
chr13:114324183|114324401 hsa-miR-5579-3p 0 1 0
chr13:114324285|114324377 hsa-miR-5579-3p 0 1 0
chr19:16133432|16133572 hsa-miR-5579-3p 0 1 0
chr1:153778950|153779043 hsa-miR-5579-3p 0 1 0
chr6:30034908|30035037 hsa-miR-5579-3p 1 0 0
chr2:101839819|101842624 hsa-miR-5579-3p 1 0 0
chr19:36547523|36547606 hsa-miR-5579-3p 0 1 0
chr11:118601795|118601975 hsa-miR-5579-3p 0 1 0
chr1:150796513|150796600 hsa-miR-5579-3p 0 1 0
chr3:64095169|64095269 hsa-miR-5579-3p 0 1 0
chr14:21090475|21090562 hsa-miR-5579-3p 0 1 0
chr1:150796513|150796616 hsa-miR-5579-3p 0 1 0
chr1:153778815|153779165 hsa-miR-5579-3p 0 1 0
chr1:108157462|108157607 hsa-miR-5579-3p 0 1 0
chr12:13206214|13206302 hsa-miR-5579-3p 0 1 0
chr1:211366761|211366876 hsa-miR-5579-3p 0 1 0
chr1:203166285|203166406 hsa-miR-5579-3p 0 1 0
chr1:153763832|153764195 hsa-miR-5579-3p 0 1 0
chr4:48294060~48294236 hsa-miR-5579-3p 0 1 0
chr1:150796513~150796616 hsa-miR-5579-3p 0 1 0
chr19:16133432~16133570 hsa-miR-5579-3p 0 1 0
chr1:153763842~153764195 hsa-miR-5579-3p 0 1 0
chr13:114324285~114324377 hsa-miR-5579-3p 0 1 0
chr1:3629499~3629658 hsa-miR-5579-3p 0 1 0
chr19:55645319~55645459 hsa-miR-5579-3p 0 1 0
chr19:16133432~16133572 hsa-miR-5579-3p 0 1 0
chr3:64095169~64095269 hsa-miR-5579-3p 0 1 0
chr11:10506696~10506914 hsa-miR-5579-3p 0 1 0
chr22:41357989|41358164 hsa-miR-5579-3p 0 1 0
chr12:95978718|95978862 hsa-miR-5579-3p 0 1 0
chr1:41037445|41037587 hsa-miR-5579-3p 0 1 0
chr17:5433519|5433704 hsa-miR-5579-3p 0 1 0
chr14:21090408|21090562 hsa-miR-5579-3p 0 1 0
chr2:178653238|178663902 hsa-miR-5579-3p 0 1 0
chr1:179039285|179039362 hsa-miR-5579-3p 0 1 0
chr12:67306501|67306601 hsa-miR-5579-3p 1 0 0
chr15:65054114|65054250 hsa-miR-5579-3p 1 0 0
chr11:126981433|126981580 hsa-miR-5579-3p 0 1 0
chr19:41771176|41771290 hsa-miR-5579-3p 0 1 0
chr12:95210879|95211135 hsa-miR-5579-3p 0 1 0
chr9:112872055|112872211 hsa-miR-5579-3p 0 1 0
chrX:65509013|65509349 hsa-miR-5579-3p 0 1 0
chr19:41771136|41771288 hsa-miR-5579-3p 0 1 0
chrX:53649411|53649615 hsa-miR-5579-3p 0 1 0
chr11:111926252|111926463 hsa-miR-5579-3p 0 1 0
chr2:178616075|178616376 hsa-miR-5579-3p 0 1 0
chr19:16133404|16133572 hsa-miR-5579-3p 0 1 0
chr19:41770967|41771219 hsa-miR-5579-3p 0 1 0
chr1:153778950|153779078 hsa-miR-5579-3p 0 1 0
chr20:20036012|20036106 hsa-miR-5579-3p 0 1 0
chr19:41771063|41771219 hsa-miR-5579-3p 0 1 0
chr19:41771081|41771219 hsa-miR-5579-3p 0 1 0
chr2:75694241|75696315 hsa-miR-5579-3p 0 1 0
chr17:7939579|7939749 hsa-miR-5579-3p 0 1 0
chr9:112872055|112872289 hsa-miR-5579-3p 0 1 0
chr3:121492724|121492898 hsa-miR-5579-3p 0 1 0
chr1:203166263|203166382 hsa-miR-5579-3p 0 1 0
chr10:50433476|50433556 hsa-miR-5579-3p 0 1 0
chr19:41771081|41771341 hsa-miR-5579-3p 0 1 0
chr4:48546067|48546204 hsa-miR-5579-3p 0 1 0
chr20:3211959|3212119 hsa-miR-5579-3p 0 1 0
chr2:222620042|222620150 hsa-miR-5579-3p 0 1 0
chr19:41771164|41771288 hsa-miR-5579-3p 0 1 0
chr1:153763854|153764221 hsa-miR-5579-3p -3 1 0
chr16:23668082|23668193 hsa-miR-5579-3p -6 1 0
chr16:69369498|69369646 hsa-miR-5579-3p 0 1 0
chr18:12678193|12678301 hsa-miR-5579-3p 1 0 0
chr2:231400428|231400597 hsa-miR-5579-3p 0 1 0
chr12:89521918|89522067 hsa-miR-5579-3p 0 1 0
chr2:65205776|65205924 hsa-miR-5579-3p 0 1 0
chr1:161222356|161222487 hsa-miR-5579-3p 0 1 0
chr12:120577164|120577398 hsa-miR-5579-3p 0 1 0
chr16:21976167|21976229 hsa-miR-5579-3p 0 1 0
chr19:16133404|16133570 hsa-miR-5579-3p 0 1 0
chr16:15741760|15741825 hsa-miR-5579-3p 0 1 0
chr2:85596863|85597178 hsa-miR-5579-3p 0 1 0
chr11:14498838|14498933 hsa-miR-5579-3p 0 1 0
chr12:110726232|110726350 hsa-miR-5579-3p 0 1 0
chr1:161222356|161222460 hsa-miR-5579-3p 0 1 0
chrX:153787484|153787849 hsa-miR-5579-3p 1 0 0
chr16:15741760|15741873 hsa-miR-5579-3p 1 0 0
chr12:67306501|67306597 hsa-miR-5579-3p 1 0 0
chr19:18163029|18163327 hsa-miR-5579-3p 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-5579-3p ZNF772 zinc finger protein 772 HGNC:33106 details
hsa-miR-5579-3p SP8 Sp8 transcription factor HGNC:19196 details
hsa-miR-5579-3p RABIF RAB interacting factor HGNC:9797 details
hsa-miR-5579-3p MCM9 minichromosome maintenance 9 homologous recombination repair factor HGNC:21484 details
hsa-miR-5579-3p ANXA11 annexin A11 HGNC:535 details
hsa-miR-5579-3p FMNL3 formin like 3 HGNC:23698 details
hsa-miR-5579-3p PPP2R1B protein phosphatase 2 scaffold subunit Abeta HGNC:9303 details
hsa-miR-5579-3p PTPN14 protein tyrosine phosphatase non-receptor type 14 HGNC:9647 details
hsa-miR-5579-3p GID4 GID complex subunit 4 homolog HGNC:28453 details
hsa-miR-5579-3p FOXN2 forkhead box N2 HGNC:5281 details
hsa-miR-5579-3p details
hsa-miR-5579-3p NRF1 nuclear respiratory factor 1 HGNC:7996 details
hsa-miR-5579-3p ZNF460 zinc finger protein 460 HGNC:21628 details
hsa-miR-5579-3p UQCRB ubiquinol-cytochrome c reductase binding protein HGNC:12582 details
hsa-miR-5579-3p RPRD2 regulation of nuclear pre-mRNA domain containing 2 HGNC:29039 details
hsa-miR-5579-3p PURG purine rich element binding protein G HGNC:17930 details
hsa-miR-5579-3p KLHL15 kelch like family member 15 HGNC:29347 details
hsa-miR-5579-3p EIF1AX eukaryotic translation initiation factor 1A X-linked HGNC:3250 details
hsa-miR-5579-3p STXBP5L syntaxin binding protein 5L HGNC:30757 details
hsa-miR-5579-3p SENP1 SUMO specific peptidase 1 HGNC:17927 details
hsa-miR-5579-3p RNF125 ring finger protein 125 HGNC:21150 details
hsa-miR-5579-3p JMJD1C jumonji domain containing 1C HGNC:12313 details
hsa-miR-5579-3p FRS2 fibroblast growth factor receptor substrate 2 HGNC:16971 details
hsa-miR-5579-3p TMEM170A transmembrane protein 170A HGNC:29577 details
hsa-miR-5579-3p PDCD4 programmed cell death 4 HGNC:8763 details
hsa-miR-5579-3p E2F3 E2F transcription factor 3 HGNC:3115 details
hsa-miR-5579-3p ZNF567 zinc finger protein 567 HGNC:28696 details
hsa-miR-5579-3p details
hsa-miR-5579-3p GRPEL2 GrpE like 2, mitochondrial HGNC:21060 details
hsa-miR-5579-3p PRRC2C proline rich coiled-coil 2C HGNC:24903 details
hsa-miR-5579-3p PRAMEF1 PRAME family member 1 HGNC:28840 details
hsa-miR-5579-3p GNAQ G protein subunit alpha q HGNC:4390 details
hsa-miR-5579-3p OSTM1 osteoclastogenesis associated transmembrane protein 1 HGNC:21652 details
hsa-miR-5579-3p CLIC5 chloride intracellular channel 5 HGNC:13517 details
hsa-miR-5579-3p CCR6 C-C motif chemokine receptor 6 HGNC:1607 details
hsa-miR-5579-3p FAM98B family with sequence similarity 98 member B HGNC:26773 details
hsa-miR-5579-3p STX6 syntaxin 6 HGNC:11441 details
hsa-miR-5579-3p ATF7IP activating transcription factor 7 interacting protein HGNC:20092 details
hsa-miR-5579-3p MAK16 MAK16 homolog HGNC:13703 details
hsa-miR-5579-3p NUMBL NUMB like endocytic adaptor protein HGNC:8061 details
hsa-miR-5579-3p PRR14L proline rich 14 like HGNC:28738 details
hsa-miR-5579-3p RAB5B RAB5B, member RAS oncogene family HGNC:9784 details
hsa-miR-5579-3p ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 HGNC:24645 details
hsa-miR-5579-3p RDH11 retinol dehydrogenase 11 HGNC:17964 details
hsa-miR-5579-3p EPM2AIP1 EPM2A interacting protein 1 HGNC:19735 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab