miRNA Card

miRNA General Information
miRNA ID hsa-miR-5583-3p
Description Homo sapiens miR-5583-1 stem-loop
Comment None
Experiment
Sequence GAAUAUGGGUAUAUUAGUUUGG
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr1:145994016|145995465 hsa-miR-5583-3p 1 1 1

Confidence 2 (2 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr1:145995243|145995476 hsa-miR-5583-3p 1 1 0
chr1:145995255|145995476 hsa-miR-5583-3p 1 1 0

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr1:165683082|165695329 hsa-miR-5583-3p 0 1 0
chr10:110122123|110122244 hsa-miR-5583-3p 0 1 0
chr17:41981816|41981939 hsa-miR-5583-3p 0 1 0
chr15:59081107|59081205 hsa-miR-5583-3p 0 1 0
chr2:168772454|168772566 hsa-miR-5583-3p 0 1 0
chr12:112970617|112970786 hsa-miR-5583-3p 0 1 0
chr8:55825200|55825300 hsa-miR-5583-3p 0 1 0
chr5:150129553|150129661 hsa-miR-5583-3p 0 1 0
chr4:87493582|87493689 hsa-miR-5583-3p 0 1 0
chr6:75919023|75919241 hsa-miR-5583-3p 1 0 0
chr2:74040390|74040576 hsa-miR-5583-3p 0 1 0
chr14:68789087|68789279 hsa-miR-5583-3p 0 1 0
chr3:49415755|49415942 hsa-miR-5583-3p 0 1 0
chr7:127707557|127707638 hsa-miR-5583-3p 0 1 0
chr5:140661632|140662007 hsa-miR-5583-3p 0 1 0
chr15:90953619|90953712 hsa-miR-5583-3p 0 1 0
chr11:60927381|60927757 hsa-miR-5583-3p 0 1 0
chr20:49953387|49953515 hsa-miR-5583-3p 0 1 0
chr15:85138513|85138693 hsa-miR-5583-3p 0 1 0
chr3:9943113|9943428 hsa-miR-5583-3p 0 1 0
chr2:168772402|168772529 hsa-miR-5583-3p 0 1 0
chr17:68128423|68128563 hsa-miR-5583-3p 0 1 0
chr1:162527095|162527277 hsa-miR-5583-3p 0 1 0
chr5:116551131|116551231 hsa-miR-5583-3p 0 1 0
chr4:102887906|102888111 hsa-miR-5583-3p 0 1 0
chr2:219232306|219232570 hsa-miR-5583-3p 0 1 0
chr9:115076032|115076121 hsa-miR-5583-3p 0 1 0
chr7:107758373|107758522 hsa-miR-5583-3p 0 1 0
chr12:6951625|6952018 hsa-miR-5583-3p 0 1 0
chr2:168771504|168771778 hsa-miR-5583-3p 0 1 0
chr2:24957810~24957914 hsa-miR-5583-3p 0 1 0
chr3:49415773~49415908 hsa-miR-5583-3p 0 1 0
chr3:9943113~9943446 hsa-miR-5583-3p 0 1 0
chr19:58570703~58570838 hsa-miR-5583-3p 0 1 0
chr15:63063754~63063922 hsa-miR-5583-3p 0 1 0
chr16:71284409~71284536 hsa-miR-5583-3p 0 1 0
chr15:63063776~63063922 hsa-miR-5583-3p 0 1 0
chr1:51634637|51634775 hsa-miR-5583-3p 0 1 0
chr8:8850865|8851001 hsa-miR-5583-3p 0 1 0
chr14:73381371|73381479 hsa-miR-5583-3p 0 1 0
chr11:68028057|68028235 hsa-miR-5583-3p 0 1 0
chr8:80990733|80990903 hsa-miR-5583-3p 0 1 0
chr9:75132775|75132901 hsa-miR-5583-3p 0 1 0
chr4:150729825|150729977 hsa-miR-5583-3p 0 1 0
chr12:120698984|120699121 hsa-miR-5583-3p 1 0 0
chr5:171997841|171998021 hsa-miR-5583-3p 0 1 0
chr9:123901505|123901602 hsa-miR-5583-3p 0 1 0
chr12:121638210|121638347 hsa-miR-5583-3p 0 1 0
chr1:65066304|65066448 hsa-miR-5583-3p 0 1 0
chr2:25389943|25390106 hsa-miR-5583-3p 0 1 0
chr17:63770648|63770772 hsa-miR-5583-3p 0 1 0
chr1:165683082|165695367 hsa-miR-5583-3p 0 1 0
chr16:71284409|71284536 hsa-miR-5583-3p 0 1 0
chr2:205797481|205797608 hsa-miR-5583-3p 0 1 0
chr5:123614986|123615089 hsa-miR-5583-3p 0 1 0
chr15:90953588|90953800 hsa-miR-5583-3p 0 1 0
chr15:90953590|90953720 hsa-miR-5583-3p 0 1 0
chr12:95996165|95996356 hsa-miR-5583-3p 0 1 0
chr22:30379264|30379402 hsa-miR-5583-3p 0 1 0
chr12:112970645|112970772 hsa-miR-5583-3p 0 1 0
chr11:85694632|85694752 hsa-miR-5583-3p 0 1 0
chr3:49415755|49415898 hsa-miR-5583-3p 0 1 0
chr2:37643578|37643702 hsa-miR-5583-3p 0 1 0
chr12:47783323|47783475 hsa-miR-5583-3p 0 1 0
chr6:75253056|75253253 hsa-miR-5583-3p 0 1 0
chr17:50188604|50188967 hsa-miR-5583-3p 0 1 0
chr1:11803371|11803560 hsa-miR-5583-3p 0 1 0
chr2:65090983|65098066 hsa-miR-5583-3p 0 1 0
chr5:78779115|78779222 hsa-miR-5583-3p 0 1 0
chr12:26996742|26999676 hsa-miR-5583-3p 0 1 0
chr19:35540761|35540915 hsa-miR-5583-3p 0 1 0
chr12:112970579|112970772 hsa-miR-5583-3p 0 1 0
chr2:218248857|218249064 hsa-miR-5583-3p 0 1 0
chr1:162528377|162528501 hsa-miR-5583-3p 0 1 0
chr5:140966555|140966671 hsa-miR-5583-3p 0 1 0
chr17:72421467|72421608 hsa-miR-5583-3p 0 1 0
chr7:107758340|107758429 hsa-miR-5583-3p 0 1 0
chr4:102887906|102888079 hsa-miR-5583-3p 0 1 0
chr2:64460255|64460477 hsa-miR-5583-3p 0 1 0
chrX:49113156|49113288 hsa-miR-5583-3p 0 1 0
chr16:25169112|25169213 hsa-miR-5583-3p 0 1 0
chr7:87195687|87195833 hsa-miR-5583-3p 0 1 0
chr4:102887908|102888077 hsa-miR-5583-3p 0 1 0
chr7:5233408|5233538 hsa-miR-5583-3p 0 1 0
chr14:60975177|60975568 hsa-miR-5583-3p 0 1 0
chr1:28943747|28943853 hsa-miR-5583-3p 0 1 0
chr1:162528442|162528640 hsa-miR-5583-3p 0 1 0
chr2:30642148|30642339 hsa-miR-5583-3p -9 1 0
chr1:153959196|153959376 hsa-miR-5583-3p -3 1 0
chr12:112970469|112970772 hsa-miR-5583-3p 0 1 0
chr4:102887906|102888077 hsa-miR-5583-3p -9 1 0
chr12:120699028|120699156 hsa-miR-5583-3p 1 0 0
chrX:12823997|12824135 hsa-miR-5583-3p 0 1 0
chr1:26855203|26855335 hsa-miR-5583-3p 0 1 0
chr5:136051904|136052042 hsa-miR-5583-3p 0 1 0
chr3:189994094|189994224 hsa-miR-5583-3p 0 1 0
chr2:18555479|18555647 hsa-miR-5583-3p 0 1 0
chr2:41381|41541 hsa-miR-5583-3p 0 1 0
chr9:91410745|91410897 hsa-miR-5583-3p 0 1 0
chr5:146113289|146113571 hsa-miR-5583-3p 0 1 0
chr9:93446182|93446377 hsa-miR-5583-3p 0 1 0
chr15:63063746|63063922 hsa-miR-5583-3p 0 1 0
chr9:19371756|19372097 hsa-miR-5583-3p 0 1 0
chr7:34929326|34929413 hsa-miR-5583-3p 0 1 0
chrX:4542108|4542329 hsa-miR-5583-3p 0 1 0
chr13:45536023|45536323 hsa-miR-5583-3p 0 1 0
chr4:87493582|87493681 hsa-miR-5583-3p 0 1 0
chr16:69118084|69118248 hsa-miR-5583-3p 0 1 0
chr3:37008820|37008894 hsa-miR-5583-3p 0 1 0
chr20:24967996|24968161 hsa-miR-5583-3p 0 1 0
chr2:168772465|168772566 hsa-miR-5583-3p 0 1 0
chr1:145995259|145995476 hsa-miR-5583-3p 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-5583-3p ZNF623 zinc finger protein 623 HGNC:29084 details
hsa-miR-5583-3p NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 HGNC:7701 details
hsa-miR-5583-3p NCOA3 nuclear receptor coactivator 3 HGNC:7670 details
hsa-miR-5583-3p RIF1 replication timing regulatory factor 1 HGNC:23207 details
hsa-miR-5583-3p ZBTB38 zinc finger and BTB domain containing 38 HGNC:26636 details
hsa-miR-5583-3p YTHDC1 YTH domain containing 1 HGNC:30626 details
hsa-miR-5583-3p SMG1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase HGNC:30045 details
hsa-miR-5583-3p SLC38A1 solute carrier family 38 member 1 HGNC:13447 details
hsa-miR-5583-3p RASAL2 RAS protein activator like 2 HGNC:9874 details
hsa-miR-5583-3p INSIG2 insulin induced gene 2 HGNC:20452 details
hsa-miR-5583-3p E2F3 E2F transcription factor 3 HGNC:3115 details
hsa-miR-5583-3p BCL2L11 BCL2 like 11 HGNC:994 details
hsa-miR-5583-3p ATL3 atlastin GTPase 3 HGNC:24526 details
hsa-miR-5583-3p XIAP X-linked inhibitor of apoptosis HGNC:592 details
hsa-miR-5583-3p PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 HGNC:8974 details
hsa-miR-5583-3p RFWD3 ring finger and WD repeat domain 3 HGNC:25539 details
hsa-miR-5583-3p RNFT1 ring finger protein, transmembrane 1 HGNC:30206 details
hsa-miR-5583-3p ZNF12 zinc finger protein 12 HGNC:12902 details
hsa-miR-5583-3p CSMD1 CUB and Sushi multiple domains 1 HGNC:14026 details
hsa-miR-5583-3p RCAN3 RCAN family member 3 HGNC:3042 details
hsa-miR-5583-3p LYSMD3 LysM domain containing 3 HGNC:26969 details
hsa-miR-5583-3p EIF4A2 eukaryotic translation initiation factor 4A2 HGNC:3284 details
hsa-miR-5583-3p CCNT1 cyclin T1 HGNC:1599 details
hsa-miR-5583-3p MTRNR2L6 MT-RNR2 like 6 HGNC:37163 details
hsa-miR-5583-3p DDX55 DEAD-box helicase 55 HGNC:20085 details
hsa-miR-5583-3p C11orf58 chromosome 11 open reading frame 58 HGNC:16990 details
hsa-miR-5583-3p PPP2CA protein phosphatase 2 catalytic subunit alpha HGNC:9299 details
hsa-miR-5583-3p ABCF1 ATP binding cassette subfamily F member 1 HGNC:70 details
hsa-miR-5583-3p ZFP62 ZFP62 zinc finger protein HGNC:23241 details
hsa-miR-5583-3p ELP3 elongator acetyltransferase complex subunit 3 HGNC:20696 details
hsa-miR-5583-3p KLRD1 killer cell lectin like receptor D1 HGNC:6378 details
hsa-miR-5583-3p TRIM4 tripartite motif containing 4 HGNC:16275 details
hsa-miR-5583-3p details
hsa-miR-5583-3p CCNB1 cyclin B1 HGNC:1579 details
hsa-miR-5583-3p RRP8 ribosomal RNA processing 8 HGNC:29030 details
hsa-miR-5583-3p SGTB small glutamine rich tetratricopeptide repeat co-chaperone beta HGNC:23567 details
hsa-miR-5583-3p CNBP CCHC-type zinc finger nucleic acid binding protein HGNC:13164 details
hsa-miR-5583-3p ARL10 ADP ribosylation factor like GTPase 10 HGNC:22042 details
hsa-miR-5583-3p SDHD succinate dehydrogenase complex subunit D HGNC:10683 details
hsa-miR-5583-3p PM20D2 peptidase M20 domain containing 2 HGNC:21408 details
hsa-miR-5583-3p PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 HGNC:9108 details
hsa-miR-5583-3p PIGW phosphatidylinositol glycan anchor biosynthesis class W HGNC:23213 details
hsa-miR-5583-3p MIB1 MIB E3 ubiquitin protein ligase 1 HGNC:21086 details
hsa-miR-5583-3p HSPA13 heat shock protein family A (Hsp70) member 13 HGNC:11375 details
hsa-miR-5583-3p BOLA3 bolA family member 3 HGNC:24415 details
hsa-miR-5583-3p ATP7A ATPase copper transporting alpha HGNC:869 details
hsa-miR-5583-3p PTPRD protein tyrosine phosphatase receptor type D HGNC:9668 details
hsa-miR-5583-3p PITX2 paired like homeodomain 2 HGNC:9005 details
hsa-miR-5583-3p MYLIP myosin regulatory light chain interacting protein HGNC:21155 details
hsa-miR-5583-3p MXD1 MAX dimerization protein 1 HGNC:6761 details
hsa-miR-5583-3p MBNL2 muscleblind like splicing regulator 2 HGNC:16746 details
hsa-miR-5583-3p BRAP BRCA1 associated protein HGNC:1099 details
hsa-miR-5583-3p B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 HGNC:15629 details
hsa-miR-5583-3p ZNF28 zinc finger protein 28 HGNC:13073 details
hsa-miR-5583-3p TNFRSF21 TNF receptor superfamily member 21 HGNC:13469 details
hsa-miR-5583-3p LRRC58 leucine rich repeat containing 58 HGNC:26968 details
hsa-miR-5583-3p KCNC4 potassium voltage-gated channel subfamily C member 4 HGNC:6236 details
hsa-miR-5583-3p CDC27 cell division cycle 27 HGNC:1728 details
hsa-miR-5583-3p RHOA ras homolog family member A HGNC:667 details
hsa-miR-5583-3p details
hsa-miR-5583-3p AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 HGNC:23463 details
hsa-miR-5583-3p LAX1 lymphocyte transmembrane adaptor 1 HGNC:26005 details
hsa-miR-5583-3p CTSV cathepsin V HGNC:2538 details
hsa-miR-5583-3p ZNF486 zinc finger protein 486 HGNC:20807 details
hsa-miR-5583-3p LRCH1 leucine rich repeats and calponin homology domain containing 1 HGNC:20309 details
hsa-miR-5583-3p LRP2BP LRP2 binding protein HGNC:25434 details
hsa-miR-5583-3p CYBRD1 cytochrome b reductase 1 HGNC:20797 details
hsa-miR-5583-3p FZD2 frizzled class receptor 2 HGNC:4040 details
hsa-miR-5583-3p OLA1 Obg like ATPase 1 HGNC:28833 details
hsa-miR-5583-3p APOC3 apolipoprotein C3 HGNC:610 details
hsa-miR-5583-3p WDR13 WD repeat domain 13 HGNC:14352 details
hsa-miR-5583-3p ZNF652 zinc finger protein 652 HGNC:29147 details
hsa-miR-5583-3p MBNL1 muscleblind like splicing regulator 1 HGNC:6923 details
hsa-miR-5583-3p JARID2 jumonji and AT-rich interaction domain containing 2 HGNC:6196 details
hsa-miR-5583-3p MKLN1 muskelin 1 HGNC:7109 details
hsa-miR-5583-3p BACH2 BTB domain and CNC homolog 2 HGNC:14078 details
hsa-miR-5583-3p ADD2 adducin 2 HGNC:244 details
hsa-miR-5583-3p BBOX1 gamma-butyrobetaine hydroxylase 1 HGNC:964 details
hsa-miR-5583-3p KCNS2 potassium voltage-gated channel modifier subfamily S member 2 HGNC:6301 details
hsa-miR-5583-3p KLHL5 kelch like family member 5 HGNC:6356 details
hsa-miR-5583-3p CD302 CD302 molecule HGNC:30843 details
hsa-miR-5583-3p LY75-CD302 LY75-CD302 readthrough HGNC:38828 details
hsa-miR-5583-3p LY75 lymphocyte antigen 75 HGNC:6729 details
hsa-miR-5583-3p ULBP2 UL16 binding protein 2 HGNC:14894 details
hsa-miR-5583-3p details
hsa-miR-5583-3p KNTC1 kinetochore associated 1 HGNC:17255 details
hsa-miR-5583-3p LOX lysyl oxidase HGNC:6664 details
hsa-miR-5583-3p POLI DNA polymerase iota HGNC:9182 details
hsa-miR-5583-3p RASGRP1 RAS guanyl releasing protein 1 HGNC:9878 details
hsa-miR-5583-3p SNIP1 Smad nuclear interacting protein 1 HGNC:30587 details
hsa-miR-5583-3p B3GAT2 beta-1,3-glucuronyltransferase 2 HGNC:922 details
hsa-miR-5583-3p DNAL1 dynein axonemal light chain 1 HGNC:23247 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab