miRNA Card

miRNA General Information
miRNA ID hsa-miR-5707
Description Homo sapiens miR-5707 stem-loop
Comment None
Experiment Illumina [1]
Sequence ACGUUUGAAUGCUGUACAAGGC
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr15:40420012|40420172 hsa-miR-5707 1 0 0
chrX:136511478|136511741 hsa-miR-5707 1 0 0
chr20:43702526|43702627 hsa-miR-5707 1 0 0
chr11:61314047|61314202 hsa-miR-5707 0 1 0
chr11:78250205|78250298 hsa-miR-5707 0 1 0
chr5:138557257|138557404 hsa-miR-5707 0 1 0
chr12:98549025|98549202 hsa-miR-5707 0 1 0
chr16:31182688|31182836 hsa-miR-5707 0 1 0
chr16:50319980|50320323 hsa-miR-5707 0 1 0
chr1:161965876|161966048 hsa-miR-5707 0 1 0
chr22:18088810|18088952 hsa-miR-5707 0 1 0
chr19:764058|764287 hsa-miR-5707 0 1 0
chr7:64685265|64685512 hsa-miR-5707 1 0 0
chrX:136511636|136511741 hsa-miR-5707 1 0 0
chrX:136511634|136511741 hsa-miR-5707 1 0 0
chr12:108532573|108532660 hsa-miR-5707 1 0 0
chr15:80594516|80594624 hsa-miR-5707 1 0 0
chrX:136511627|136511741 hsa-miR-5707 1 0 0
chr19:51014436|51014699 hsa-miR-5707 1 0 0
chr13:113978713|113978805 hsa-miR-5707 0 1 0
chr17:35830634|35830797 hsa-miR-5707 0 1 0
chr6:13288865|13289022 hsa-miR-5707 0 1 0
chr4:84649335|84649488 hsa-miR-5707 0 1 0
chr7:28821086|28821229 hsa-miR-5707 0 1 0
chr8:38413553|38413792 hsa-miR-5707 0 1 0
chr1:12011832|12011993 hsa-miR-5707 0 1 0
chr8:102311858|102312218 hsa-miR-5707 0 1 0
chr11:61314047~61314202 hsa-miR-5707 0 1 0
chr3:172516872~172517045 hsa-miR-5707 0 1 0
chr22:20115209~20115357 hsa-miR-5707 0 1 0
chr17:68530361~68530469 hsa-miR-5707 0 1 0
chr20:18527920|18528103 hsa-miR-5707 1 0 0
chr5:83521813|83522006 hsa-miR-5707 1 0 0
chr10:59792969|59793101 hsa-miR-5707 0 1 0
chr8:10096274|10096448 hsa-miR-5707 0 1 0
chr12:123386505|123386735 hsa-miR-5707 0 1 0
chr14:91318452|91318649 hsa-miR-5707 0 1 0
chr12:11839140|11839304 hsa-miR-5707 0 1 0
chr12:75480783|75481967 hsa-miR-5707 0 1 0
chr10:72367914|72368075 hsa-miR-5707 1 0 0
chr6:157044738|157044877 hsa-miR-5707 1 0 0
chr5:142948023|142948156 hsa-miR-5707 1 0 0
chr16:3658053|3658274 hsa-miR-5707 1 0 0
chr11:128717107|128717248 hsa-miR-5707 1 0 0
chr19:45698672|45701914 hsa-miR-5707 0 1 0
chr2:64124516|64124623 hsa-miR-5707 0 1 0
chr10:79092830|79093085 hsa-miR-5707 0 1 0
chr14:50942918|50943060 hsa-miR-5707 0 1 0
chr1:19093958|19094074 hsa-miR-5707 0 1 0
chr7:149286684|149286769 hsa-miR-5707 0 1 0
chr15:42794644|42840433 hsa-miR-5707 1 0 0
chr11:17087316|17087449 hsa-miR-5707 1 0 0
chr14:77508847|77509195 hsa-miR-5707 1 0 0
chr17:81894535|81894831 hsa-miR-5707 0 1 0
chr9:35060819|35061161 hsa-miR-5707 0 1 0
chr22:18088812|18088997 hsa-miR-5707 0 1 0
chr11:64829775|64829942 hsa-miR-5707 0 1 0
chr11:63997988|63998220 hsa-miR-5707 0 1 0
chr5:37410592|37410777 hsa-miR-5707 0 1 0
chr10:91413649|91413788 hsa-miR-5707 0 1 0
chrX:135032376|135032692 hsa-miR-5707 0 1 0
chr19:1576574|1576676 hsa-miR-5707 0 1 0
chr14:24148081|24148353 hsa-miR-5707 0 1 0
chr6:13288863|13289022 hsa-miR-5707 0 1 0
chr11:85996826|86003451 hsa-miR-5707 0 1 0
chr22:20115275|20115475 hsa-miR-5707 0 1 0
chr7:155672867|155680908 hsa-miR-5707 0 1 0
chr10:72235212|72235387 hsa-miR-5707 0 1 0
chr5:138557257|138557415 hsa-miR-5707 0 1 0
chr2:10444482|10444617 hsa-miR-5707 0 1 0
chr11:61437646|61437795 hsa-miR-5707 0 1 0
chr16:69584134|69584220 hsa-miR-5707 0 1 0
chr2:65022457|65022692 hsa-miR-5707 -13 1 0
chr12:6817186|6817305 hsa-miR-5707 1 0 0
chr15:80131223|80137512 hsa-miR-5707 1 0 0
chr9:131473872|131474024 hsa-miR-5707 1 0 0
chr7:76480465|76480620 hsa-miR-5707 1 0 0
chr15:80131216|80137512 hsa-miR-5707 1 0 0
chr11:118543166|118543295 hsa-miR-5707 0 1 0
chr1:12011780|12011993 hsa-miR-5707 0 1 0
chr22:18088812|18088952 hsa-miR-5707 0 1 0
chr9:35060499|35060858 hsa-miR-5707 0 1 0
chr12:51048488|51048759 hsa-miR-5707 0 1 0
chr10:46006147|46006387 hsa-miR-5707 0 1 0
chr19:39492363|39492422 hsa-miR-5707 0 1 0
chr2:117831243|117831439 hsa-miR-5707 0 1 0
chr20:31572254|31572357 hsa-miR-5707 0 1 0
chr4:108621959|108622204 hsa-miR-5707 0 1 0
chr11:2395494|2395970 hsa-miR-5707 0 1 0
chr9:112221273|112221398 hsa-miR-5707 0 1 0
chr16:49586736|49586861 hsa-miR-5707 0 1 0
chr10:5453250|5454289 hsa-miR-5707 0 1 0
chr4:108621969|108622204 hsa-miR-5707 0 1 0
chr5:151803906|151804008 hsa-miR-5707 1 0 0
chr8:56009980|56010140 hsa-miR-5707 0 1 0
chr15:39598374|39598539 hsa-miR-5707 0 1 0
chr1:160376869|160377044 hsa-miR-5707 1 0 0
chr3:18386410|18386578 hsa-miR-5707 1 0 0
chrX:136511631|136511741 hsa-miR-5707 1 0 0
chr20:41203918|41204064 hsa-miR-5707 1 0 0
chr3:167673258|167673403 hsa-miR-5707 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-5707 ZNF607 zinc finger protein 607 HGNC:28192 details
hsa-miR-5707 ACBD5 acyl-CoA binding domain containing 5 HGNC:23338 details
hsa-miR-5707 CDKN2AIP CDKN2A interacting protein HGNC:24325 details
hsa-miR-5707 ZNF786 zinc finger protein 786 HGNC:21806 details
hsa-miR-5707 KLHL15 kelch like family member 15 HGNC:29347 details
hsa-miR-5707 C17orf58 chromosome 17 open reading frame 58 HGNC:27568 details
hsa-miR-5707 MMP17 matrix metallopeptidase 17 HGNC:7163 details
hsa-miR-5707 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase HGNC:28763 details
hsa-miR-5707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 HGNC:21050 details
hsa-miR-5707 OGFRL1 opioid growth factor receptor like 1 HGNC:21378 details
hsa-miR-5707 NRXN3 neurexin 3 HGNC:8010 details
hsa-miR-5707 CASP16P caspase 16, pseudogene HGNC:27290 details
hsa-miR-5707 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like HGNC:19840 details
hsa-miR-5707 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 HGNC:30263 details
hsa-miR-5707 AP1S3 adaptor related protein complex 1 subunit sigma 3 HGNC:18971 details
hsa-miR-5707 ANKRD40 ankyrin repeat domain 40 HGNC:28233 details
hsa-miR-5707 SH3TC2 SH3 domain and tetratricopeptide repeats 2 HGNC:29427 details
hsa-miR-5707 ACACA acetyl-CoA carboxylase alpha HGNC:84 details
hsa-miR-5707 PLEKHG5 pleckstrin homology and RhoGEF domain containing G5 HGNC:29105 details
hsa-miR-5707 FAM83B family with sequence similarity 83 member B HGNC:21357 details
hsa-miR-5707 PPM1K protein phosphatase, Mg2+/Mn2+ dependent 1K HGNC:25415 details
hsa-miR-5707 RIMBP3C RIMS binding protein 3C HGNC:33892 details
hsa-miR-5707 ANO8 anoctamin 8 HGNC:29329 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab