miRNA Card

miRNA General Information
miRNA ID hsa-miR-6080
Description Homo sapiens miR-6080 stem-loop
Comment None
Experiment SOLiD [1]
Sequence UCUAGUGCGGGCGUUCCCG
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr15:23009945|23022161 hsa-miR-6080 1 1 1
chr4:81105813|81140669 hsa-miR-6080 1 1 1

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr16:15596184|15596353 hsa-miR-6080 1 0 0
chr17:38716566|38716693 hsa-miR-6080 1 0 0
chr1:108699260|108699350 hsa-miR-6080 1 0 0
chr11:6394203|6394332 hsa-miR-6080 1 0 0
chr12:49644150|49644444 hsa-miR-6080 0 1 0
chr14:72969924|72970032 hsa-miR-6080 0 1 0
chr16:58560212|58560339 hsa-miR-6080 0 1 0
chr6:161081011|161084617 hsa-miR-6080 0 1 0
chr7:150372978|150373111 hsa-miR-6080 0 1 0
chr6:32166963|32167213 hsa-miR-6080 0 1 0
chr15:90452206|90452329 hsa-miR-6080 0 1 0
chr6:109367424|109367512 hsa-miR-6080 0 1 0
chr3:184181800|184181990 hsa-miR-6080 0 1 0
chr12:56241607|56241822 hsa-miR-6080 0 1 0
chrX:73846387|73846669 hsa-miR-6080 0 1 0
chr20:438572|438706 hsa-miR-6080 0 1 0
chr1:43553864|43569608 hsa-miR-6080 0 1 0
chr16:30064043|30064192 hsa-miR-6080 0 1 0
chr6:109367412|109367512 hsa-miR-6080 0 1 0
chr1:111121395|111121526 hsa-miR-6080 0 1 0
chr3:52231127|52231491 hsa-miR-6080 0 1 0
chr17:18209020|18209136 hsa-miR-6080 0 1 0
chr3:186785005|186785093 hsa-miR-6080 0 1 0
chr17:63635493|63635629 hsa-miR-6080 1 0 0
chr20:32237674|32237784 hsa-miR-6080 1 0 0
chr20:32237446|32237784 hsa-miR-6080 1 0 0
chr9:134026590|134026757 hsa-miR-6080 1 0 0
chr4:156970974|156971082 hsa-miR-6080 1 0 0
chr5:180830770|180830968 hsa-miR-6080 1 0 0
chr1:109268039|109268670 hsa-miR-6080 1 0 0
chr1:71698008|71698139 hsa-miR-6080 1 0 0
chr19:46725499|46725609 hsa-miR-6080 1 0 0
chr3:148859838|148860019 hsa-miR-6080 1 0 0
chr6:32115403|32115526 hsa-miR-6080 1 0 0
chr17:78677051|78677211 hsa-miR-6080 1 0 0
chr19:7870370|7870591 hsa-miR-6080 1 0 0
chr14:49893979|49894111 hsa-miR-6080 1 0 0
chr16:18792585|18792950 hsa-miR-6080 1 0 0
chr6:2854558|2854758 hsa-miR-6080 1 0 0
chr7:38392012|38392159 hsa-miR-6080 1 0 0
chrX:108178684|108178809 hsa-miR-6080 1 0 0
chr11:6394265|6394488 hsa-miR-6080 1 0 0
chr13:29513148|29513287 hsa-miR-6080 1 0 0
chr12:56241607|56241820 hsa-miR-6080 0 1 0
chr12:120700048|120700129 hsa-miR-6080 0 1 0
chr14:30895363|30895547 hsa-miR-6080 0 1 0
chr12:120700038|120700233 hsa-miR-6080 0 1 0
chr3:184181208|184181990 hsa-miR-6080 0 1 0
chr19:58545452|58545824 hsa-miR-6080 0 1 0
chr17:18209085|18209277 hsa-miR-6080 0 1 0
chr16:98196|98301 hsa-miR-6080 0 1 0
chr15:43526232|43526419 hsa-miR-6080 0 1 0
chr3:4979630|4979798 hsa-miR-6080 0 1 0
chr17:73247365|73247553 hsa-miR-6080 0 1 0
chr10:101845752|101845894 hsa-miR-6080 0 1 0
chr19:58545469|58545837 hsa-miR-6080 0 1 0
chr15:74622174|74622560 hsa-miR-6080 0 1 0
chr20:35653243~35653371 hsa-miR-6080 0 1 0
chr9:35404599~35404732 hsa-miR-6080 0 1 0
chr11:117999820~118000015 hsa-miR-6080 0 1 0
chr14:64934334~64934488 hsa-miR-6080 0 1 0
chr1:19160917~19161099 hsa-miR-6080 0 1 0
chr19:58545452~58545824 hsa-miR-6080 0 1 0
chr7:150372974~150373089 hsa-miR-6080 0 1 0
chr11:117999737~117999843 hsa-miR-6080 0 1 0
chr19:19508534~19508745 hsa-miR-6080 0 1 0
chr19:7872254~7872399 hsa-miR-6080 0 1 0
chr12:120700048~120700170 hsa-miR-6080 0 1 0
chr6:109367412~109367512 hsa-miR-6080 0 1 0
chr16:30738324~30738643 hsa-miR-6080 0 1 0
chr5:81229584~81229793 hsa-miR-6080 0 1 0
chr20:34994751~34994923 hsa-miR-6080 0 1 0
chr3:4774779~4774944 hsa-miR-6080 0 1 0
chr3:148859838~148860019 hsa-miR-6080 0 1 0
chr17:1482515~1482904 hsa-miR-6080 0 1 0
chr22:30636085~30636200 hsa-miR-6080 0 1 0
chr4:88698725|88698870 hsa-miR-6080 1 0 0
chr9:35736427|35736628 hsa-miR-6080 1 0 0
chr2:105287033|105287211 hsa-miR-6080 0 1 0
chr16:30756692|30756894 hsa-miR-6080 0 1 0
chr17:77456236|77456449 hsa-miR-6080 0 1 0
chr11:67286974|67287105 hsa-miR-6080 0 1 0
chr14:24183590|24183804 hsa-miR-6080 0 1 0
chr4:184783292|184783523 hsa-miR-6080 0 1 0
chr16:58560212|58560362 hsa-miR-6080 0 1 0
chr6:36720740|36721010 hsa-miR-6080 0 1 0
chr11:65890772|65890927 hsa-miR-6080 0 1 0
chr17:82028684|82028787 hsa-miR-6080 1 0 0
chr16:19857713|19857862 hsa-miR-6080 1 0 0
chr10:122248771|122249114 hsa-miR-6080 1 0 0
chr18:23257486|23257700 hsa-miR-6080 1 0 0
chr19:49635623|49635852 hsa-miR-6080 1 0 0
chr10:122248705|122249094 hsa-miR-6080 1 0 0
chr14:38211415|38211527 hsa-miR-6080 1 0 0
chr17:28633287|28633577 hsa-miR-6080 1 0 0
chr10:122248741|122249114 hsa-miR-6080 1 0 0
chr11:14519905|14520049 hsa-miR-6080 1 0 0
chr4:147617427|147617578 hsa-miR-6080 1 0 0
chr10:122248738|122249114 hsa-miR-6080 1 0 0
chr15:90082245|90082450 hsa-miR-6080 1 0 0
chr10:24380877|24381035 hsa-miR-6080 1 0 0
chr17:41689892|41690176 hsa-miR-6080 1 0 0
chr6:125978966|125979105 hsa-miR-6080 1 0 0
chr6:16410370|16410542 hsa-miR-6080 1 0 0
chr15:90881312|90881470 hsa-miR-6080 1 0 0
chr19:7870463|7870591 hsa-miR-6080 1 0 0
chr22:32272902|32273157 hsa-miR-6080 1 0 0
chr7:149866899|149867072 hsa-miR-6080 0 1 0
chr5:1461785|1462001 hsa-miR-6080 0 1 0
chr5:1461840|1461973 hsa-miR-6080 0 1 0
chr9:35404626|35404732 hsa-miR-6080 0 1 0
chr1:117626909|117627112 hsa-miR-6080 0 1 0
chr21:46190559|46190746 hsa-miR-6080 0 1 0
chr22:24171755|24171935 hsa-miR-6080 0 1 0
chr17:42818325|42818609 hsa-miR-6080 0 1 0
chr3:149657959|149658091 hsa-miR-6080 0 1 0
chr1:19160917|19161084 hsa-miR-6080 0 1 0
chr3:14819470|14819635 hsa-miR-6080 0 1 0
chr2:96831330|96831670 hsa-miR-6080 0 1 0
chr17:82942490|82942615 hsa-miR-6080 0 1 0
chr20:57711436|57711660 hsa-miR-6080 0 1 0
chr1:153941179|153941440 hsa-miR-6080 0 1 0
chr22:24171755|24171941 hsa-miR-6080 0 1 0
chr5:81227997|81228131 hsa-miR-6080 0 1 0
chr3:49811248|49811395 hsa-miR-6080 0 1 0
chr9:35404604|35404732 hsa-miR-6080 0 1 0
chr2:165870606|165870693 hsa-miR-6080 0 1 0
chr1:111121393|111121523 hsa-miR-6080 0 1 0
chr21:38301617|38301811 hsa-miR-6080 0 1 0
chr17:18209085|18209287 hsa-miR-6080 0 1 0
chr1:45640210|45642499 hsa-miR-6080 0 1 0
chr16:58559804|58560362 hsa-miR-6080 0 1 0
chr11:64315102|64315232 hsa-miR-6080 0 1 0
chr1:97178967|97179083 hsa-miR-6080 0 1 0
chr7:150372820|150373111 hsa-miR-6080 0 1 0
chr1:32330578|32330858 hsa-miR-6080 0 1 0
chr12:113296913|113297070 hsa-miR-6080 0 1 0
chr5:1461840|1461983 hsa-miR-6080 0 1 0
chr3:149657924|149658091 hsa-miR-6080 0 1 0
chr10:27250133|27250276 hsa-miR-6080 0 1 0
chr3:4979589|4979798 hsa-miR-6080 0 1 0
chr19:58545469|58545824 hsa-miR-6080 0 1 0
chr1:37800755|37800939 hsa-miR-6080 0 1 0
chr19:19508528|19508754 hsa-miR-6080 0 1 0
chr8:143021352|143021633 hsa-miR-6080 0 1 0
chr1:19160917|19161099 hsa-miR-6080 0 1 0
chr11:117999699|117999843 hsa-miR-6080 0 1 0
chr11:117999655|117999843 hsa-miR-6080 0 1 0
chr11:117999719|117999843 hsa-miR-6080 0 1 0
chr6:43073902|43073965 hsa-miR-6080 0 1 0
chr7:150372976|150373111 hsa-miR-6080 -10 1 0
chr6:30900066|30900257 hsa-miR-6080 -6 1 0
chr8:143021354|143021633 hsa-miR-6080 -11 1 0
chr5:177611173|177611261 hsa-miR-6080 0 1 0
chr20:32237676|32237784 hsa-miR-6080 1 0 0
chr17:78677044|78677195 hsa-miR-6080 1 0 0
chr20:32237622|32237784 hsa-miR-6080 1 0 0
chr17:78677051|78677195 hsa-miR-6080 1 0 0
chr20:32237546|32237784 hsa-miR-6080 1 0 0
chr3:197672917|197673042 hsa-miR-6080 1 0 0
chr10:122248780|122249114 hsa-miR-6080 1 0 0
chr17:5434888|5438183 hsa-miR-6080 1 0 0
chr6:125276212|125277231 hsa-miR-6080 0 1 0
chr14:24183590|24183853 hsa-miR-6080 0 1 0
chr16:31081254|31081449 hsa-miR-6080 0 1 0
chr22:30636085|30636188 hsa-miR-6080 0 1 0
chr15:74622171|74622560 hsa-miR-6080 0 1 0
chr19:15239132|15239264 hsa-miR-6080 0 1 0
chr14:24183590|24183835 hsa-miR-6080 0 1 0
chr17:18209085|18209282 hsa-miR-6080 0 1 0
chr19:19508570|19508745 hsa-miR-6080 0 1 0
chr14:24183590|24183832 hsa-miR-6080 0 1 0
chr11:67250401|67250650 hsa-miR-6080 0 1 0
chr7:150329277|150329469 hsa-miR-6080 0 1 0
chr5:160563841|160563990 hsa-miR-6080 0 1 0
chr8:144359724|144360060 hsa-miR-6080 0 1 0
chr7:150373002|150373111 hsa-miR-6080 0 1 0
chr12:120700051|120700129 hsa-miR-6080 0 1 0
chr17:28635397|28635586 hsa-miR-6080 0 1 0
chr14:24183590|24183892 hsa-miR-6080 0 1 0
chr13:102630096|102633972 hsa-miR-6080 0 1 0
chr17:18209020|18209160 hsa-miR-6080 0 1 0
chr1:45566608|45566904 hsa-miR-6080 0 1 0
chr3:49811235|49811395 hsa-miR-6080 0 1 0
chr7:150373008|150373111 hsa-miR-6080 0 1 0
chr2:43888019|43888169 hsa-miR-6080 0 1 0
chr12:57235557|57235775 hsa-miR-6080 0 1 0
chr12:120699953|120700149 hsa-miR-6080 0 1 0
chr1:45566614|45566946 hsa-miR-6080 0 1 0
chr11:45926152|45926278 hsa-miR-6080 0 1 0
chr11:117999726|117999843 hsa-miR-6080 0 1 0
chr10:78035358|78035625 hsa-miR-6080 0 1 0
chr14:24183474|24183802 hsa-miR-6080 0 1 0
chr5:55976215|55976293 hsa-miR-6080 0 1 0
chr3:47421009|47422526 hsa-miR-6080 0 1 0
chr14:24183590|24183840 hsa-miR-6080 0 1 0
chr3:197672917|197673068 hsa-miR-6080 1 0 0
chr20:58674464|58674676 hsa-miR-6080 1 0 0
chr1:54780844|54780960 hsa-miR-6080 1 0 0
chr13:29513148|29513367 hsa-miR-6080 1 0 0
chr6:125978966|125979119 hsa-miR-6080 1 0 0
chr9:97854957|97855197 hsa-miR-6080 1 0 0
chr4:68314095|68314236 hsa-miR-6080 1 0 0
chr12:132769675|132769789 hsa-miR-6080 1 0 0
chr17:76093815|76094040 hsa-miR-6080 1 0 0
chr19:46725514|46725609 hsa-miR-6080 1 0 0
chr9:137039786|137040039 hsa-miR-6080 1 0 0
chr9:96617979|96618097 hsa-miR-6080 1 0 0
chr11:6394203|6394319 hsa-miR-6080 1 0 0
chr19:51083878|51084072 hsa-miR-6080 1 0 0
chr11:66003356|66003753 hsa-miR-6080 1 0 0
chr17:5434873|5438175 hsa-miR-6080 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-6080 AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 HGNC:16922 details
hsa-miR-6080 USP36 ubiquitin specific peptidase 36 HGNC:20062 details
hsa-miR-6080 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils HGNC:29383 details
hsa-miR-6080 NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 HGNC:23987 details
hsa-miR-6080 SMC1A structural maintenance of chromosomes 1A HGNC:11111 details
hsa-miR-6080 OIP5 Opa interacting protein 5 HGNC:20300 details
hsa-miR-6080 POP7 POP7 homolog, ribonuclease P/MRP subunit HGNC:19949 details
hsa-miR-6080 TRIM37 tripartite motif containing 37 HGNC:7523 details
hsa-miR-6080 USP13 ubiquitin specific peptidase 13 HGNC:12611 details
hsa-miR-6080 SYNM synemin HGNC:24466 details
hsa-miR-6080 ACVR1 activin A receptor type 1 HGNC:171 details
hsa-miR-6080 RNF157 ring finger protein 157 HGNC:29402 details
hsa-miR-6080 ZNF620 zinc finger protein 620 HGNC:28742 details
hsa-miR-6080 KLHL28 kelch like family member 28 HGNC:19741 details
hsa-miR-6080 HIPK1 homeodomain interacting protein kinase 1 HGNC:19006 details
hsa-miR-6080 ZNF107 zinc finger protein 107 HGNC:12887 details
hsa-miR-6080 details
hsa-miR-6080 SRSF2 serine and arginine rich splicing factor 2 HGNC:10783 details
hsa-miR-6080 IFT140 intraflagellar transport 140 HGNC:29077 details
hsa-miR-6080 IFNB1 interferon beta 1 HGNC:5434 details
hsa-miR-6080 TMEM198 transmembrane protein 198 HGNC:33704 details
hsa-miR-6080 PDE4D phosphodiesterase 4D HGNC:8783 details
hsa-miR-6080 BLVRA biliverdin reductase A HGNC:1062 details
hsa-miR-6080 ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 HGNC:18803 details
hsa-miR-6080 ABCG8 ATP binding cassette subfamily G member 8 HGNC:13887 details
hsa-miR-6080 ADAM22 ADAM metallopeptidase domain 22 HGNC:201 details
hsa-miR-6080 KPNA4 karyopherin subunit alpha 4 HGNC:6397 details
hsa-miR-6080 TULP4 TUB like protein 4 HGNC:15530 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab