miRNA Card

miRNA General Information
miRNA ID hsa-miR-6508-5p
Description Homo sapiens miR-6508 stem-loop
Comment None
Experiment Illumina [1]
Sequence UCUAGAAAUGCAUGACCCACC
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 2 (2 of 3 tools predicted)

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr3:15648828|15648990 hsa-miR-6508-5p 1 0 0
chr19:12940765|12940887 hsa-miR-6508-5p 0 1 0
chr15:90487062|90487582 hsa-miR-6508-5p 0 1 0
chr17:39922032|39922123 hsa-miR-6508-5p 0 1 0
chr6:152102701|152102894 hsa-miR-6508-5p 0 1 0
chr19:16879664|16880025 hsa-miR-6508-5p 0 1 0
chr6:152102518|152102894 hsa-miR-6508-5p 0 1 0
chr5:168556068|168556443 hsa-miR-6508-5p 0 1 0
chr4:184716397|184716625 hsa-miR-6508-5p 0 1 0
chr12:104289018|104311395 hsa-miR-6508-5p 0 1 0
chr19:52225769|52226154 hsa-miR-6508-5p 0 1 0
chr15:90487495|90487582 hsa-miR-6508-5p 0 1 0
chr20:62946650|62946814 hsa-miR-6508-5p 0 1 0
chr2:226732055|226732151 hsa-miR-6508-5p 0 1 0
chr16:11887635|11887746 hsa-miR-6508-5p 1 0 0
chr4:169720739|169720928 hsa-miR-6508-5p 1 0 0
chr1:15518171|15518323 hsa-miR-6508-5p 0 1 0
chr19:3976105|3976288 hsa-miR-6508-5p 0 1 0
chr6:30493379|30493493 hsa-miR-6508-5p 0 1 0
chr19:3976105|3976230 hsa-miR-6508-5p 0 1 0
chr17:81908568|81908917 hsa-miR-6508-5p 0 1 0
chr16:20857017|20857105 hsa-miR-6508-5p 0 1 0
chr20:38091629|38091836 hsa-miR-6508-5p 0 1 0
chr4:787610|787848 hsa-miR-6508-5p 0 1 0
chr10:60869697|60869880 hsa-miR-6508-5p 0 1 0
chr7:140024212|140024364 hsa-miR-6508-5p 0 1 0
chr3:42646382|42646484 hsa-miR-6508-5p 0 1 0
chr10:122270865|122271084 hsa-miR-6508-5p 0 1 0
chr12:51354082|51354245 hsa-miR-6508-5p 0 1 0
chr3:51666669|51666902 hsa-miR-6508-5p 0 1 0
chr19:12940765~12940887 hsa-miR-6508-5p 0 1 0
chr6:110893606~110893689 hsa-miR-6508-5p 0 1 0
chr10:103591350|103591490 hsa-miR-6508-5p 0 1 0
chr6:29887567~29887775 hsa-miR-6508-5p 0 1 0
chr17:28676331~28677729 hsa-miR-6508-5p 0 1 0
chr10:101039787~101040069 hsa-miR-6508-5p 0 1 0
chrX:63427965~63428183 hsa-miR-6508-5p 0 1 0
chr10:97458654~97458857 hsa-miR-6508-5p 0 1 0
chr17:39922011~39922142 hsa-miR-6508-5p 0 1 0
chr6:33771993~33772194 hsa-miR-6508-5p 0 1 0
chr12:51354082~51354175 hsa-miR-6508-5p 0 1 0
chr6:30493391|30493617 hsa-miR-6508-5p 0 1 0
chr4:7064634~7064869 hsa-miR-6508-5p 0 1 0
chr12:104289018~104311383 hsa-miR-6508-5p 0 1 0
chr17:44093575~44093676 hsa-miR-6508-5p 0 1 0
chr19:3976105~3976226 hsa-miR-6508-5p 0 1 0
chr19:3976105~3976230 hsa-miR-6508-5p 0 1 0
chr2:226732055~226732151 hsa-miR-6508-5p 0 1 0
chr18:24019992~24020262 hsa-miR-6508-5p 0 1 0
chr6:33772049~33772217 hsa-miR-6508-5p 0 1 0
chr1:107572226~107572403 hsa-miR-6508-5p 0 1 0
chr3:52704799~52704878 hsa-miR-6508-5p 0 1 0
chr5:67182911|67183057 hsa-miR-6508-5p 1 0 0
chr11:66060616|66060731 hsa-miR-6508-5p 0 1 0
chr1:45263906|45264040 hsa-miR-6508-5p 0 1 0
chr9:89378063|89378248 hsa-miR-6508-5p 0 1 0
chr14:31119710|31119800 hsa-miR-6508-5p 0 1 0
chr14:24186708|24186955 hsa-miR-6508-5p 0 1 0
chr6:6758955|6759087 hsa-miR-6508-5p 0 1 0
chr16:81644085|81644292 hsa-miR-6508-5p 0 1 0
chr2:178653238|178663902 hsa-miR-6508-5p 0 1 0
chr19:3976105|3976286 hsa-miR-6508-5p 0 1 0
chr20:58995518|58995681 hsa-miR-6508-5p 1 0 0
chr2:191424446|191424595 hsa-miR-6508-5p 1 0 0
chr11:45882485|45882646 hsa-miR-6508-5p 0 1 0
chr11:72097342|72097523 hsa-miR-6508-5p 0 1 0
chr6:33771962|33772113 hsa-miR-6508-5p 0 1 0
chr9:125241231|125241323 hsa-miR-6508-5p 0 1 0
chr12:52307114|52307287 hsa-miR-6508-5p 0 1 0
chr11:66060582|66060721 hsa-miR-6508-5p 0 1 0
chr2:134713200|134713319 hsa-miR-6508-5p 0 1 0
chr12:10221950|10222129 hsa-miR-6508-5p 0 1 0
chr19:805148|805546 hsa-miR-6508-5p 0 1 0
chr9:130578361|130578524 hsa-miR-6508-5p 0 1 0
chr6:32859638|32859761 hsa-miR-6508-5p 0 1 0
chr1:26183197|26183414 hsa-miR-6508-5p 0 1 0
chrX:63428086|63428325 hsa-miR-6508-5p 0 1 0
chr16:55480079|55480297 hsa-miR-6508-5p 0 1 0
chr18:49591151|49591287 hsa-miR-6508-5p 0 1 0
chr3:25596738|25596925 hsa-miR-6508-5p 0 1 0
chr9:125241251|125241340 hsa-miR-6508-5p 0 1 0
chr5:43174774|43175070 hsa-miR-6508-5p 0 1 0
chr19:3976105|3976254 hsa-miR-6508-5p 0 1 0
chr12:131939173|131941333 hsa-miR-6508-5p 0 1 0
chr1:94529587|94529802 hsa-miR-6508-5p 0 1 0
chr12:55822193|55822309 hsa-miR-6508-5p 0 1 0
chr6:33771962|33772170 hsa-miR-6508-5p 0 1 0
chr9:125241251|125241328 hsa-miR-6508-5p 0 1 0
chr2:197007806|197009031 hsa-miR-6508-5p 0 1 0
chr18:69112385|69112532 hsa-miR-6508-5p 0 1 0
chr14:30715924|30722559 hsa-miR-6508-5p 0 1 0
chr9:83678441|83683066 hsa-miR-6508-5p 0 1 0
chr4:102826815|102826894 hsa-miR-6508-5p 0 1 0
chr11:61518435|61518570 hsa-miR-6508-5p 0 1 0
chr4:1822181|1823050 hsa-miR-6508-5p 0 1 0
chr5:132483469|132483699 hsa-miR-6508-5p 0 1 0
chr9:125241121|125241323 hsa-miR-6508-5p 0 1 0
chr11:45882471|45882648 hsa-miR-6508-5p 0 1 0
chr19:47065737|47065920 hsa-miR-6508-5p 0 1 0
chr1:51909126|51909311 hsa-miR-6508-5p 0 1 0
chr5:98779594|98779741 hsa-miR-6508-5p 0 1 0
chr6:160084087|160084179 hsa-miR-6508-5p 0 1 0
chr3:136991961|136992081 hsa-miR-6508-5p 0 1 0
chr7:101097497|101097656 hsa-miR-6508-5p 0 1 0
chr1:154467016|154467123 hsa-miR-6508-5p 0 1 0
chr19:4038513|4038750 hsa-miR-6508-5p 0 1 0
chr17:35269050|35269271 hsa-miR-6508-5p 0 1 0
chr10:56358336|56358687 hsa-miR-6508-5p 0 1 0
chr3:186786072|186786220 hsa-miR-6508-5p 0 1 0
chr1:162380285|162380441 hsa-miR-6508-5p 0 1 0
chr14:102882891|102883005 hsa-miR-6508-5p 0 1 0
chr14:31119710|31119856 hsa-miR-6508-5p 0 1 0
chr11:61518268|61518480 hsa-miR-6508-5p 0 1 0
chrX:63428092|63428202 hsa-miR-6508-5p -3 1 0
chr16:86581300|86581445 hsa-miR-6508-5p -9 1 0
chr3:52704724|52704882 hsa-miR-6508-5p -12 1 0
chr2:96252170|96252272 hsa-miR-6508-5p -5 1 0
chr19:16879631|16879969 hsa-miR-6508-5p -6 1 0
chr11:16977039|16977197 hsa-miR-6508-5p -1 1 0
chr20:58995500|58995681 hsa-miR-6508-5p 1 0 0
chr20:50581989|50582267 hsa-miR-6508-5p 0 1 0
chr16:1698838|1699086 hsa-miR-6508-5p 0 1 0
chr1:36340989|36341228 hsa-miR-6508-5p 0 1 0
chr9:125241251|125241323 hsa-miR-6508-5p 0 1 0
chr9:125241214|125241319 hsa-miR-6508-5p 0 1 0
chr14:31116388|31119737 hsa-miR-6508-5p 0 1 0
chr10:97458654|97458857 hsa-miR-6508-5p 0 1 0
chr7:101097505|101097656 hsa-miR-6508-5p 0 1 0
chr16:1698835|1699086 hsa-miR-6508-5p 0 1 0
chr9:125241214|125241323 hsa-miR-6508-5p 0 1 0
chr11:118105865|118106024 hsa-miR-6508-5p 0 1 0
chr7:20136356|20136567 hsa-miR-6508-5p 0 1 0
chr17:30467682|30467818 hsa-miR-6508-5p 0 1 0
chr7:150858798|150859001 hsa-miR-6508-5p 0 1 0
chr2:96252170|96252293 hsa-miR-6508-5p 0 1 0
chr14:69712873|69712979 hsa-miR-6508-5p 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-6508-5p NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 HGNC:7719 details
hsa-miR-6508-5p TRPV2 transient receptor potential cation channel subfamily V member 2 HGNC:18082 details
hsa-miR-6508-5p KLHL20 kelch like family member 20 HGNC:25056 details
hsa-miR-6508-5p HPS4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 HGNC:15844 details
hsa-miR-6508-5p SAMD9L sterile alpha motif domain containing 9 like HGNC:1349 details
hsa-miR-6508-5p LHFPL3 LHFPL tetraspan subfamily member 3 HGNC:6589 details
hsa-miR-6508-5p ZNF134 zinc finger protein 134 HGNC:12918 details
hsa-miR-6508-5p ANKRD11 ankyrin repeat domain 11 HGNC:21316 details
hsa-miR-6508-5p ZNFX1 zinc finger NFX1-type containing 1 HGNC:29271 details
hsa-miR-6508-5p details
hsa-miR-6508-5p EBAG9 estrogen receptor binding site associated antigen 9 HGNC:3123 details
hsa-miR-6508-5p MTRNR2L10 MT-RNR2 like 10 HGNC:37167 details
hsa-miR-6508-5p TMBIM6 transmembrane BAX inhibitor motif containing 6 HGNC:11723 details
hsa-miR-6508-5p MTRNR2L8 MT-RNR2 like 8 HGNC:37165 details
hsa-miR-6508-5p DDX3X DEAD-box helicase 3 X-linked HGNC:2745 details
hsa-miR-6508-5p GTF2A1 general transcription factor IIA subunit 1 HGNC:4646 details
hsa-miR-6508-5p KLHL15 kelch like family member 15 HGNC:29347 details
hsa-miR-6508-5p MTRNR2L6 MT-RNR2 like 6 HGNC:37163 details
hsa-miR-6508-5p BCL2L11 BCL2 like 11 HGNC:994 details
hsa-miR-6508-5p PLA2G2C phospholipase A2 group IIC HGNC:9032 details
hsa-miR-6508-5p RPRD2 regulation of nuclear pre-mRNA domain containing 2 HGNC:29039 details
hsa-miR-6508-5p PSAT1 phosphoserine aminotransferase 1 HGNC:19129 details
hsa-miR-6508-5p FHL2 four and a half LIM domains 2 HGNC:3703 details
hsa-miR-6508-5p CNOT6L CCR4-NOT transcription complex subunit 6 like HGNC:18042 details
hsa-miR-6508-5p FSIP2 fibrous sheath interacting protein 2 HGNC:21675 details
hsa-miR-6508-5p SOD2 superoxide dismutase 2 HGNC:11180 details
hsa-miR-6508-5p CCDC169 coiled-coil domain containing 169 HGNC:34361 details
hsa-miR-6508-5p MDM2 MDM2 proto-oncogene HGNC:6973 details
hsa-miR-6508-5p CD59 CD59 molecule (CD59 blood group) HGNC:1689 details
hsa-miR-6508-5p ZKSCAN8 zinc finger with KRAB and SCAN domains 8 HGNC:12983 details
hsa-miR-6508-5p NUP35 nucleoporin 35 HGNC:29797 details
hsa-miR-6508-5p HEPHL1 hephaestin like 1 HGNC:30477 details
hsa-miR-6508-5p NT5DC3 5'-nucleotidase domain containing 3 HGNC:30826 details
hsa-miR-6508-5p SCO1 synthesis of cytochrome C oxidase 1 HGNC:10603 details
hsa-miR-6508-5p ZNF136 zinc finger protein 136 HGNC:12920 details
hsa-miR-6508-5p ASS1 argininosuccinate synthase 1 HGNC:758 details
hsa-miR-6508-5p IPMK inositol polyphosphate multikinase HGNC:20739 details
hsa-miR-6508-5p TMEM97 transmembrane protein 97 HGNC:28106 details
hsa-miR-6508-5p KPNA1 karyopherin subunit alpha 1 HGNC:6394 details
hsa-miR-6508-5p CCNG1 cyclin G1 HGNC:1592 details
hsa-miR-6508-5p MRPS30 mitochondrial ribosomal protein S30 HGNC:8769 details
hsa-miR-6508-5p details
hsa-miR-6508-5p LUZP1 leucine zipper protein 1 HGNC:14985 details
hsa-miR-6508-5p ABHD5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase HGNC:21396 details
hsa-miR-6508-5p TOB2 transducer of ERBB2, 2 HGNC:11980 details
hsa-miR-6508-5p TAF7 TATA-box binding protein associated factor 7 HGNC:11541 details
hsa-miR-6508-5p EIF2S3 eukaryotic translation initiation factor 2 subunit gamma HGNC:3267 details
hsa-miR-6508-5p TEF TEF transcription factor, PAR bZIP family member HGNC:11722 details
hsa-miR-6508-5p NUP50 nucleoporin 50 HGNC:8065 details
hsa-miR-6508-5p SEH1L SEH1 like nucleoporin HGNC:30379 details
hsa-miR-6508-5p SEC63 SEC63 homolog, protein translocation regulator HGNC:21082 details
hsa-miR-6508-5p KANSL1 KAT8 regulatory NSL complex subunit 1 HGNC:24565 details
hsa-miR-6508-5p YPEL1 yippee like 1 HGNC:12845 details
hsa-miR-6508-5p details
hsa-miR-6508-5p LANCL3 LanC like 3 HGNC:24767 details
hsa-miR-6508-5p BBS9 Bardet-Biedl syndrome 9 HGNC:30000 details
hsa-miR-6508-5p SMIM18 small integral membrane protein 18 HGNC:42973 details
hsa-miR-6508-5p FOXN3 forkhead box N3 HGNC:1928 details
hsa-miR-6508-5p CCDC90B coiled-coil domain containing 90B HGNC:28108 details
hsa-miR-6508-5p ZNF800 zinc finger protein 800 HGNC:27267 details
hsa-miR-6508-5p RAP2B RAP2B, member of RAS oncogene family HGNC:9862 details
hsa-miR-6508-5p RABGEF1 RAB guanine nucleotide exchange factor 1 HGNC:17676 details
hsa-miR-6508-5p ATP11A ATPase phospholipid transporting 11A HGNC:13552 details
hsa-miR-6508-5p MED24 mediator complex subunit 24 HGNC:22963 details
hsa-miR-6508-5p PPP1R3D protein phosphatase 1 regulatory subunit 3D HGNC:9294 details
hsa-miR-6508-5p PCTP phosphatidylcholine transfer protein HGNC:8752 details
hsa-miR-6508-5p RPL24 ribosomal protein L24 HGNC:10325 details
hsa-miR-6508-5p PPP1R3E protein phosphatase 1 regulatory subunit 3E HGNC:14943 details
hsa-miR-6508-5p MCL1 MCL1 apoptosis regulator, BCL2 family member HGNC:6943 details
hsa-miR-6508-5p PEAK1 pseudopodium enriched atypical kinase 1 HGNC:29431 details
hsa-miR-6508-5p SH3RF2 SH3 domain containing ring finger 2 HGNC:26299 details
hsa-miR-6508-5p AMD1 adenosylmethionine decarboxylase 1 HGNC:457 details
hsa-miR-6508-5p RPL13A ribosomal protein L13a HGNC:10304 details
hsa-miR-6508-5p CLN8 CLN8 transmembrane ER and ERGIC protein HGNC:2079 details
hsa-miR-6508-5p NFATC3 nuclear factor of activated T cells 3 HGNC:7777 details
hsa-miR-6508-5p ZBTB34 zinc finger and BTB domain containing 34 HGNC:31446 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab