miRNA Card

miRNA General Information
miRNA ID hsa-miR-6853-3p
Description Homo sapiens miR-6853 stem-loop
Comment None
Experiment meta-analysis [1]
Sequence UGUUCAUUGGAACCCUGCGCAG
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr11:126010341|126015510 hsa-miR-6853-3p 1 1 1
chr5:129620618|129622348 hsa-miR-6853-3p 1 1 1

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr20:34072120|34072290 hsa-miR-6853-3p 1 0 0
chrX:47658863|47659180 hsa-miR-6853-3p 1 0 0
chr2:20641025|20641180 hsa-miR-6853-3p 1 0 0
chr6:33321311|33321541 hsa-miR-6853-3p 1 0 0
chr16:46658103|46658314 hsa-miR-6853-3p 1 0 0
chr5:150403161|150403289 hsa-miR-6853-3p 0 1 0
chr17:67032958|67033061 hsa-miR-6853-3p 0 1 0
chr19:14092536|14092715 hsa-miR-6853-3p 0 1 0
chr1:19655324|19656895 hsa-miR-6853-3p 0 1 0
chr1:19655181|19656895 hsa-miR-6853-3p 0 1 0
chr20:34072093|34072308 hsa-miR-6853-3p 0 1 0
chr1:145746117|145746362 hsa-miR-6853-3p 0 1 0
chr6:44251834|44252066 hsa-miR-6853-3p 0 1 0
chr3:141447534|141447666 hsa-miR-6853-3p 0 1 0
chr3:58294280|58294453 hsa-miR-6853-3p 0 1 0
chr17:67032958|67033113 hsa-miR-6853-3p 0 1 0
chr17:74837740|74837897 hsa-miR-6853-3p 0 1 0
chr15:80596117|80596286 hsa-miR-6853-3p 0 1 0
chr13:98457168|98457295 hsa-miR-6853-3p 0 1 0
chr12:53669148|53669273 hsa-miR-6853-3p 0 1 0
chr14:77258122|77258277 hsa-miR-6853-3p 0 1 0
chr1:161965876|161966048 hsa-miR-6853-3p 0 1 0
chr12:896071|896328 hsa-miR-6853-3p 0 1 0
chr1:19655171|19656895 hsa-miR-6853-3p 0 1 0
chr2:127720140|127720271 hsa-miR-6853-3p 0 1 0
chr16:14650202|14650302 hsa-miR-6853-3p 0 1 0
chr2:141480396|141480533 hsa-miR-6853-3p 0 1 0
chr5:140631886|140632115 hsa-miR-6853-3p 0 1 0
chr7:44827162|44827436 hsa-miR-6853-3p 1 0 0
chr2:131639753|131639922 hsa-miR-6853-3p 1 0 0
chr19:17306485|17306652 hsa-miR-6853-3p 1 0 0
chr19:46610411|46610648 hsa-miR-6853-3p 1 0 0
chr3:53071265|53071427 hsa-miR-6853-3p 1 0 0
chr6:139373490|139373662 hsa-miR-6853-3p 1 0 0
chr2:215379172|215379319 hsa-miR-6853-3p 1 0 0
chr3:114086643|114086749 hsa-miR-6853-3p 1 0 0
chr1:9355863|9356026 hsa-miR-6853-3p 1 0 0
chr17:76386431|76386830 hsa-miR-6853-3p 1 0 0
chrX:16841477|16841686 hsa-miR-6853-3p 1 0 0
chr1:111118805|111119903 hsa-miR-6853-3p 1 0 0
chr5:151182372|151182662 hsa-miR-6853-3p 1 0 0
chr10:75030569|75030765 hsa-miR-6853-3p 1 0 0
chr19:52226145|52226344 hsa-miR-6853-3p 1 0 0
chr6:33321311|33321396 hsa-miR-6853-3p 1 0 0
chrX:154432350|154432459 hsa-miR-6853-3p 1 0 0
chr19:52226145|52226342 hsa-miR-6853-3p 1 0 0
chr12:53669210|53669333 hsa-miR-6853-3p 0 1 0
chr19:1987226|1987618 hsa-miR-6853-3p 0 1 0
chr1:19655140|19656895 hsa-miR-6853-3p 0 1 0
chr1:19655157|19656895 hsa-miR-6853-3p 0 1 0
chr3:150742319|150742475 hsa-miR-6853-3p 0 1 0
chr12:53669148|53669244 hsa-miR-6853-3p 0 1 0
chr17:57974604|57974889 hsa-miR-6853-3p 0 1 0
chr22:35664450|35664624 hsa-miR-6853-3p 0 1 0
chr2:189578351|189578464 hsa-miR-6853-3p 0 1 0
chr2:53700312|53700406 hsa-miR-6853-3p 0 1 0
chr3:133838166|133838255 hsa-miR-6853-3p 0 1 0
chr13:20413282|20413383 hsa-miR-6853-3p 0 1 0
chr11:72577137|72577282 hsa-miR-6853-3p 0 1 0
chr3:12183876|12184033 hsa-miR-6853-3p 0 1 0
chr2:214932078|214932199 hsa-miR-6853-3p 0 1 0
chr6:33163516|33163712 hsa-miR-6853-3p 0 1 0
chr1:19655335|19656895 hsa-miR-6853-3p 0 1 0
chr11:95068303|95068399 hsa-miR-6853-3p 0 1 0
chr17:48059207|48059386 hsa-miR-6853-3p 0 1 0
chr21:26467833|26467914 hsa-miR-6853-3p 0 1 0
chr6:44251854|44252066 hsa-miR-6853-3p 0 1 0
chrX:24057455|24057681 hsa-miR-6853-3p 0 1 0
chr8:94250301~94250584 hsa-miR-6853-3p 0 1 0
chr1:19655181~19656895 hsa-miR-6853-3p 0 1 0
chr1:175009537~175009684 hsa-miR-6853-3p 0 1 0
chr1:19655324~19656895 hsa-miR-6853-3p 0 1 0
chr12:122865977~122866131 hsa-miR-6853-3p 0 1 0
chr17:40134842~40134993 hsa-miR-6853-3p 0 1 0
chr3:133838166~133838255 hsa-miR-6853-3p 0 1 0
chr18:57664362~57664538 hsa-miR-6853-3p 0 1 0
chr5:150403121~150403301 hsa-miR-6853-3p 0 1 0
chr19:46777060~46777368 hsa-miR-6853-3p 0 1 0
chr10:128097333|128097482 hsa-miR-6853-3p 0 1 0
chr1:19655157~19656895 hsa-miR-6853-3p 0 1 0
chr19:46777060~46777268 hsa-miR-6853-3p 0 1 0
chr1:19655335~19656895 hsa-miR-6853-3p 0 1 0
chr6:44251854~44252154 hsa-miR-6853-3p 0 1 0
chr21:45263611~45263851 hsa-miR-6853-3p 0 1 0
chr17:67032958~67033061 hsa-miR-6853-3p 0 1 0
chr15:40903177~40903364 hsa-miR-6853-3p 0 1 0
chr11:114408314~114408427 hsa-miR-6853-3p 0 1 0
chr1:19655171~19656895 hsa-miR-6853-3p 0 1 0
chr14:24237075~24237546 hsa-miR-6853-3p 0 1 0
chr12:122865977~122866166 hsa-miR-6853-3p 0 1 0
chr1:19655126~19656895 hsa-miR-6853-3p 0 1 0
chr17:47964932|47965140 hsa-miR-6853-3p 1 0 0
chr16:2763074|2763238 hsa-miR-6853-3p 1 0 0
chr5:178205842|178205967 hsa-miR-6853-3p 1 0 0
chr1:232015334|232015481 hsa-miR-6853-3p 1 0 0
chr12:53669148|53669285 hsa-miR-6853-3p 0 1 0
chr2:230520501|230520623 hsa-miR-6853-3p 0 1 0
chr1:15935457|15935566 hsa-miR-6853-3p 0 1 0
chrX:1489050|1489271 hsa-miR-6853-3p 0 1 0
chr12:14640332|14640455 hsa-miR-6853-3p 0 1 0
chr10:101661376|101661564 hsa-miR-6853-3p 0 1 0
chr3:11567562|11567683 hsa-miR-6853-3p 0 1 0
chr2:177220817|177220996 hsa-miR-6853-3p 0 1 0
chr14:72974779|72974876 hsa-miR-6853-3p 1 0 0
chr20:41086359|41086533 hsa-miR-6853-3p 1 0 0
chr19:17306485|17306662 hsa-miR-6853-3p 1 0 0
chr18:45875004|45875168 hsa-miR-6853-3p 1 0 0
chr10:45004308|45004421 hsa-miR-6853-3p 1 0 0
chr17:32375003|32375102 hsa-miR-6853-3p 0 1 0
chr16:46963068|46963159 hsa-miR-6853-3p 0 1 0
chr3:4710475|4710587 hsa-miR-6853-3p 0 1 0
chr2:190912646|190912781 hsa-miR-6853-3p 0 1 0
chr14:64941686|64941765 hsa-miR-6853-3p 0 1 0
chr4:86928210|86928335 hsa-miR-6853-3p 0 1 0
chr21:32000493|32000612 hsa-miR-6853-3p 1 0 0
chr9:131523005|131523160 hsa-miR-6853-3p 1 0 0
chr2:215379172|215379301 hsa-miR-6853-3p 1 0 0
chr8:144106844|144107141 hsa-miR-6853-3p 1 0 0
chr3:197865423|197866219 hsa-miR-6853-3p 1 0 0
chr1:9355884|9356026 hsa-miR-6853-3p 1 0 0
chr11:65184066|65184192 hsa-miR-6853-3p 1 0 0
chrX:154431886|154432459 hsa-miR-6853-3p 1 0 0
chr2:27058124|27058307 hsa-miR-6853-3p 1 0 0
chr16:81046009|81046157 hsa-miR-6853-3p 1 0 0
chr13:29512081|29512205 hsa-miR-6853-3p 1 0 0
chr12:49963534|49963656 hsa-miR-6853-3p 1 0 0
chr11:64896056|64896174 hsa-miR-6853-3p 0 1 0
chr19:46777060|46777368 hsa-miR-6853-3p 0 1 0
chr1:19655124|19656895 hsa-miR-6853-3p 0 1 0
chr16:70257848|70257927 hsa-miR-6853-3p 0 1 0
chr1:35187051|35187239 hsa-miR-6853-3p 0 1 0
chr15:39591284|39591601 hsa-miR-6853-3p 0 1 0
chr22:36265786|36265946 hsa-miR-6853-3p 0 1 0
chr14:91018750|91018925 hsa-miR-6853-3p 0 1 0
chr13:31329599|31329715 hsa-miR-6853-3p 0 1 0
chr4:152537470|152537615 hsa-miR-6853-3p 0 1 0
chr16:70257780|70257972 hsa-miR-6853-3p 0 1 0
chr9:98123590|98123846 hsa-miR-6853-3p 0 1 0
chr7:151235416|151235588 hsa-miR-6853-3p 0 1 0
chr7:101251235|101251382 hsa-miR-6853-3p 0 1 0
chr11:47528527|47528644 hsa-miR-6853-3p 0 1 0
chr20:34072126|34072308 hsa-miR-6853-3p 0 1 0
chr1:67705005|67705126 hsa-miR-6853-3p 0 1 0
chr5:134927738|134927848 hsa-miR-6853-3p 0 1 0
chr4:168631250|168631471 hsa-miR-6853-3p 0 1 0
chr20:34072114|34072308 hsa-miR-6853-3p 0 1 0
chr20:34072066|34072308 hsa-miR-6853-3p 0 1 0
chr11:104945777|104945972 hsa-miR-6853-3p 0 1 0
chr1:155675010|155679512 hsa-miR-6853-3p 0 1 0
chr13:32732101|32735330 hsa-miR-6853-3p 0 1 0
chr6:44251854|44252092 hsa-miR-6853-3p 0 1 0
chr17:28635297|28635384 hsa-miR-6853-3p 0 1 0
chr5:150403121|150404707 hsa-miR-6853-3p 0 1 0
chr17:27582646|27582814 hsa-miR-6853-3p 0 1 0
chr9:136995186|136995461 hsa-miR-6853-3p 0 1 0
chr4:139047422|139047507 hsa-miR-6853-3p 0 1 0
chr12:54292542|54292716 hsa-miR-6853-3p 0 1 0
chr3:113961361|113961516 hsa-miR-6853-3p 0 1 0
chr7:129756215|129756364 hsa-miR-6853-3p 0 1 0
chr6:138420231|138420443 hsa-miR-6853-3p 0 1 0
chr14:102215630|102215756 hsa-miR-6853-3p 0 1 0
chr2:218403020|218403218 hsa-miR-6853-3p 0 1 0
chr1:46040968|46041068 hsa-miR-6853-3p 0 1 0
chr20:62806983|62807156 hsa-miR-6853-3p 0 1 0
chr19:726010|726243 hsa-miR-6853-3p 0 1 0
chr10:114367040|114367176 hsa-miR-6853-3p 0 1 0
chr3:38254836|38255079 hsa-miR-6853-3p 0 1 0
chr15:74897047|74897219 hsa-miR-6853-3p 0 1 0
chr14:91777703|91777788 hsa-miR-6853-3p 0 1 0
chr1:180281031|180281183 hsa-miR-6853-3p 0 1 0
chr1:114706669|114706875 hsa-miR-6853-3p -3 1 0
chr4:53080126|53080285 hsa-miR-6853-3p -14 1 0
chr19:46777058|46777347 hsa-miR-6853-3p -4 1 0
chr16:57383307|57383432 hsa-miR-6853-3p 0 1 0
chr16:57383307|57383439 hsa-miR-6853-3p 0 1 0
chr6:43020697|43020901 hsa-miR-6853-3p 1 0 0
chr7:151075475|151076035 hsa-miR-6853-3p 1 0 0
chr3:136328758|136328857 hsa-miR-6853-3p 1 0 0
chr19:54307881|54307966 hsa-miR-6853-3p 1 0 0
chr2:20640973|20641090 hsa-miR-6853-3p 1 0 0
chr11:2131454|2131579 hsa-miR-6853-3p 1 0 0
chr19:39476494|39476602 hsa-miR-6853-3p 1 0 0
chr11:2131454|2131581 hsa-miR-6853-3p 1 0 0
chr19:5220260|5221014 hsa-miR-6853-3p 1 0 0
chr19:39476488|39476602 hsa-miR-6853-3p 1 0 0
chr3:45004057|45004350 hsa-miR-6853-3p 0 1 0
chr21:46129321|46129440 hsa-miR-6853-3p 0 1 0
chr19:46777060|46777339 hsa-miR-6853-3p 0 1 0
chr1:154601231|154601364 hsa-miR-6853-3p 0 1 0
chr13:98457168|98457304 hsa-miR-6853-3p 0 1 0
chr8:144791773|144791872 hsa-miR-6853-3p 0 1 0
chr19:41302706|41302814 hsa-miR-6853-3p 0 1 0
chr20:34072098|34072308 hsa-miR-6853-3p 0 1 0
chr1:19655145|19656895 hsa-miR-6853-3p 0 1 0
chr6:44251854|44252063 hsa-miR-6853-3p 0 1 0
chr2:69322893|69323023 hsa-miR-6853-3p 0 1 0
chr12:53669210|53669330 hsa-miR-6853-3p 0 1 0
chr6:44251813|44252066 hsa-miR-6853-3p 0 1 0
chr9:137282177|137282392 hsa-miR-6853-3p 0 1 0
chr19:41302683|41302844 hsa-miR-6853-3p 0 1 0
chr19:41302706|41302841 hsa-miR-6853-3p 0 1 0
chrX:147943292|147943546 hsa-miR-6853-3p 0 1 0
chr20:24543479|24543577 hsa-miR-6853-3p 0 1 0
chr11:4132344|4132421 hsa-miR-6853-3p 0 1 0
chr19:1439825|1439968 hsa-miR-6853-3p 0 1 0
chr1:19655126|19656895 hsa-miR-6853-3p 0 1 0
chr1:112523325|112523439 hsa-miR-6853-3p 0 1 0
chr11:114408314|114408427 hsa-miR-6853-3p 0 1 0
chr9:136862130|136862322 hsa-miR-6853-3p 0 1 0
chr6:44251834|44252092 hsa-miR-6853-3p 0 1 0
chr12:122866078|122866166 hsa-miR-6853-3p 0 1 0
chr19:11574771|11574915 hsa-miR-6853-3p 1 0 0
chr8:29062714|29062941 hsa-miR-6853-3p 1 0 0
chr6:31829910|31830137 hsa-miR-6853-3p 1 0 0
chr3:66380362|66380454 hsa-miR-6853-3p 1 0 0
chr17:2684258|2684381 hsa-miR-6853-3p 1 0 0
chr18:59431601|59431785 hsa-miR-6853-3p 1 0 0
chr17:36071024|36071099 hsa-miR-6853-3p 1 0 0
chr14:24240060|24240204 hsa-miR-6853-3p 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-6853-3p DEK DEK proto-oncogene HGNC:2768 details
hsa-miR-6853-3p details
hsa-miR-6853-3p PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 HGNC:9377 details
hsa-miR-6853-3p ZNF426 zinc finger protein 426 HGNC:20725 details
hsa-miR-6853-3p BZW1 basic leucine zipper and W2 domains 1 HGNC:18380 details
hsa-miR-6853-3p IPO7 importin 7 HGNC:9852 details
hsa-miR-6853-3p DCTN5 dynactin subunit 5 HGNC:24594 details
hsa-miR-6853-3p EIF1AX eukaryotic translation initiation factor 1A X-linked HGNC:3250 details
hsa-miR-6853-3p CD55 CD55 molecule (Cromer blood group) HGNC:2665 details
hsa-miR-6853-3p KLHL36 kelch like family member 36 HGNC:17844 details
hsa-miR-6853-3p RPL5 ribosomal protein L5 HGNC:10360 details
hsa-miR-6853-3p RAB11FIP4 RAB11 family interacting protein 4 HGNC:30267 details
hsa-miR-6853-3p PDCD10 programmed cell death 10 HGNC:8761 details
hsa-miR-6853-3p SYNM synemin HGNC:24466 details
hsa-miR-6853-3p details
hsa-miR-6853-3p CCDC25 coiled-coil domain containing 25 HGNC:25591 details
hsa-miR-6853-3p PPIL3 peptidylprolyl isomerase like 3 HGNC:9262 details
hsa-miR-6853-3p TP53INP1 tumor protein p53 inducible nuclear protein 1 HGNC:18022 details
hsa-miR-6853-3p FGF2 fibroblast growth factor 2 HGNC:3676 details
hsa-miR-6853-3p GNAT1 G protein subunit alpha transducin 1 HGNC:4393 details
hsa-miR-6853-3p UBE3A ubiquitin protein ligase E3A HGNC:12496 details
hsa-miR-6853-3p HCFC2 host cell factor C2 HGNC:24972 details
hsa-miR-6853-3p EGLN3 egl-9 family hypoxia inducible factor 3 HGNC:14661 details
hsa-miR-6853-3p TMEM241 transmembrane protein 241 HGNC:31723 details
hsa-miR-6853-3p SLC7A2 solute carrier family 7 member 2 HGNC:11060 details
hsa-miR-6853-3p FOXG1 forkhead box G1 HGNC:3811 details
hsa-miR-6853-3p BRAP BRCA1 associated protein HGNC:1099 details
hsa-miR-6853-3p ASB1 ankyrin repeat and SOCS box containing 1 HGNC:16011 details
hsa-miR-6853-3p TXNRD1 thioredoxin reductase 1 HGNC:12437 details
hsa-miR-6853-3p details
hsa-miR-6853-3p PLEKHA1 pleckstrin homology domain containing A1 HGNC:14335 details
hsa-miR-6853-3p MSL2 MSL complex subunit 2 HGNC:25544 details
hsa-miR-6853-3p MAP3K21 mitogen-activated protein kinase kinase kinase 21 HGNC:29798 details
hsa-miR-6853-3p LRRC58 leucine rich repeat containing 58 HGNC:26968 details
hsa-miR-6853-3p SAMD14 sterile alpha motif domain containing 14 HGNC:27312 details
hsa-miR-6853-3p NR2E1 nuclear receptor subfamily 2 group E member 1 HGNC:7973 details
hsa-miR-6853-3p ZNF440 zinc finger protein 440 HGNC:20874 details
hsa-miR-6853-3p MPEG1 macrophage expressed 1 HGNC:29619 details
hsa-miR-6853-3p NEURL1B neuralized E3 ubiquitin protein ligase 1B HGNC:35422 details
hsa-miR-6853-3p details
hsa-miR-6853-3p EXOC6 exocyst complex component 6 HGNC:23196 details
hsa-miR-6853-3p details
hsa-miR-6853-3p TRAPPC4 trafficking protein particle complex subunit 4 HGNC:19943 details
hsa-miR-6853-3p SORCS2 sortilin related VPS10 domain containing receptor 2 HGNC:16698 details
hsa-miR-6853-3p NANOS1 nanos C2HC-type zinc finger 1 HGNC:23044 details
hsa-miR-6853-3p SRD5A1 steroid 5 alpha-reductase 1 HGNC:11284 details
hsa-miR-6853-3p RPAP2 RNA polymerase II associated protein 2 HGNC:25791 details
hsa-miR-6853-3p DENND5B DENN domain containing 5B HGNC:28338 details
hsa-miR-6853-3p DCAF17 DDB1 and CUL4 associated factor 17 HGNC:25784 details
hsa-miR-6853-3p RS1 retinoschisin 1 HGNC:10457 details
hsa-miR-6853-3p TAOK1 TAO kinase 1 HGNC:29259 details
hsa-miR-6853-3p SMNDC1 survival motor neuron domain containing 1 HGNC:16900 details
hsa-miR-6853-3p CCDC71L coiled-coil domain containing 71 like HGNC:26685 details
hsa-miR-6853-3p C1orf52 chromosome 1 open reading frame 52 HGNC:24871 details
hsa-miR-6853-3p TMED7 transmembrane p24 trafficking protein 7 HGNC:24253 details
hsa-miR-6853-3p ZNF799 zinc finger protein 799 HGNC:28071 details
hsa-miR-6853-3p NINJ1 ninjurin 1 HGNC:7824 details
hsa-miR-6853-3p TAF2 TATA-box binding protein associated factor 2 HGNC:11536 details
hsa-miR-6853-3p ZNF470 zinc finger protein 470 HGNC:22220 details
hsa-miR-6853-3p METTL8 methyltransferase 8, methylcytidine HGNC:25856 details
hsa-miR-6853-3p ZFP36 ZFP36 ring finger protein HGNC:12862 details
hsa-miR-6853-3p CAPZA1 capping actin protein of muscle Z-line subunit alpha 1 HGNC:1488 details
hsa-miR-6853-3p TMEM233 transmembrane protein 233 HGNC:37219 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab