miRNA Card

miRNA General Information
miRNA ID hsa-miR-6872-5p
Description Homo sapiens miR-6872 stem-loop
Comment None
Experiment meta-analysis [1]
Sequence UCUCGCAUCAGGAGGCAAGG
miRNA Expression in different cancers

    by mir_boxplot.py

circRNA-miRNA-gene regulatory network

Note about Netwrok:
This is a network diagram with miRNA (purple circle) as the center.
We used three tools(PITA, miRanda, targetScan) to predict the binding sites of circrna (green circle) and miRNA. Accordingly, for this miRNA that binds to circrna, we have three confidence levels, namely confident 1, confident 2 and confident 3. Confidence value indicates how many tools can deduce these results. For each confidence, we use different kinds of dashed lines.

Target circRNA with confidence

Confidence 3 (3 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan

Confidence 1 (1 of 3 tools predicted)

CircID miRNA PITA miRanda targetScan
chr3:58424767|58424884 hsa-miR-6872-5p 1 0 0
chr2:219282842|219283162 hsa-miR-6872-5p 1 0 0
chr2:27383400|27383554 hsa-miR-6872-5p 1 0 0
chr12:122982511|122982696 hsa-miR-6872-5p 0 1 0
chr3:53228056|53228328 hsa-miR-6872-5p 0 1 0
chr4:1383811|1383993 hsa-miR-6872-5p 0 1 0
chr1:151399981|151400117 hsa-miR-6872-5p 0 1 0
chr17:16042639|16042785 hsa-miR-6872-5p 0 1 0
chr17:76009791|76010003 hsa-miR-6872-5p 0 1 0
chr10:124834598|124834783 hsa-miR-6872-5p 0 1 0
chr20:35631945|35632234 hsa-miR-6872-5p 0 1 0
chr6:6167458|6167558 hsa-miR-6872-5p 0 1 0
chr1:150994520|150994716 hsa-miR-6872-5p 0 1 0
chr19:12699803|12699952 hsa-miR-6872-5p 0 1 0
chr15:75658217|75658446 hsa-miR-6872-5p 0 1 0
chr1:2308122|2308332 hsa-miR-6872-5p 0 1 0
chr3:48982905|48983246 hsa-miR-6872-5p 1 0 0
chr19:7905135|7905351 hsa-miR-6872-5p 1 0 0
chr20:45878168|45878295 hsa-miR-6872-5p 1 0 0
chr22:40740072|40740202 hsa-miR-6872-5p 1 0 0
chr1:26951824|26951956 hsa-miR-6872-5p 1 0 0
chr19:49007029|49007329 hsa-miR-6872-5p 1 0 0
chr12:26917670|26917733 hsa-miR-6872-5p 1 0 0
chr5:151667530|151669688 hsa-miR-6872-5p 1 0 0
chr5:151667494|151669697 hsa-miR-6872-5p 1 0 0
chr16:4800570|4800677 hsa-miR-6872-5p 1 0 0
chr1:2308115|2308344 hsa-miR-6872-5p 0 1 0
chr6:44253560|44253701 hsa-miR-6872-5p 0 1 0
chr17:76009515|76009871 hsa-miR-6872-5p 0 1 0
chr19:3576579|3576934 hsa-miR-6872-5p 0 1 0
chr3:133589659|133589842 hsa-miR-6872-5p 0 1 0
chr11:65573441|65573576 hsa-miR-6872-5p 0 1 0
chr11:75961444|75961549 hsa-miR-6872-5p 0 1 0
chr6:44253489|44253598 hsa-miR-6872-5p 0 1 0
chr19:3576535|3576934 hsa-miR-6872-5p 0 1 0
chr19:53156697|53156821 hsa-miR-6872-5p 0 1 0
chr22:41906117|41906215 hsa-miR-6872-5p 0 1 0
chr14:23126942|23127127 hsa-miR-6872-5p 0 1 0
chr6:2783406|2783541 hsa-miR-6872-5p 0 1 0
chr22:40740072~40740202 hsa-miR-6872-5p 0 1 0
chr20:25300635~25300884 hsa-miR-6872-5p 0 1 0
chr21:46240840~46240959 hsa-miR-6872-5p 0 1 0
chr1:151399981~151400117 hsa-miR-6872-5p 0 1 0
chr2:73088649~73088938 hsa-miR-6872-5p 0 1 0
chr1:151399981~151400157 hsa-miR-6872-5p 0 1 0
chr17:16042639~16042785 hsa-miR-6872-5p 0 1 0
chr17:48578180~48578277 hsa-miR-6872-5p 0 1 0
chr20:24957287|24957459 hsa-miR-6872-5p 1 0 0
chr5:132924714|132924899 hsa-miR-6872-5p 1 0 0
chr1:54568277|54568357 hsa-miR-6872-5p 0 1 0
chr17:68042279|68042353 hsa-miR-6872-5p 0 1 0
chr19:37559003|37559132 hsa-miR-6872-5p 0 1 0
chr17:50397213|50397485 hsa-miR-6872-5p 0 1 0
chrX:154512823|154512936 hsa-miR-6872-5p 0 1 0
chr11:6609440|6609546 hsa-miR-6872-5p 0 1 0
chr12:93390267|93390441 hsa-miR-6872-5p 0 1 0
chr15:75658217|75658381 hsa-miR-6872-5p 0 1 0
chr6:24719820|24719959 hsa-miR-6872-5p 0 1 0
chr14:99170586|99170767 hsa-miR-6872-5p 0 1 0
chr19:49007070|49007329 hsa-miR-6872-5p 1 0 0
chr1:159918397|159918581 hsa-miR-6872-5p 1 0 0
chr5:96784942|96785124 hsa-miR-6872-5p 1 0 0
chr1:112702157|112702284 hsa-miR-6872-5p 1 0 0
chr19:811787|811937 hsa-miR-6872-5p 1 0 0
chr2:237515203|237515344 hsa-miR-6872-5p 1 0 0
chr10:5720544|5727123 hsa-miR-6872-5p 1 0 0
chr2:24135119|24139450 hsa-miR-6872-5p 1 0 0
chr19:13968590|13968824 hsa-miR-6872-5p 1 0 0
chr3:13351912|13352109 hsa-miR-6872-5p 1 0 0
chr3:58424782|58424884 hsa-miR-6872-5p 1 0 0
chr7:151014262|151014404 hsa-miR-6872-5p 1 0 0
chr16:2001004|2001136 hsa-miR-6872-5p 1 0 0
chr1:209625762|209625898 hsa-miR-6872-5p 1 0 0
chr1:159918397|159918526 hsa-miR-6872-5p 1 0 0
chr6:31540445|31540602 hsa-miR-6872-5p 1 0 0
chr6:44253560|44253756 hsa-miR-6872-5p 0 1 0
chr3:53228102|53228359 hsa-miR-6872-5p 0 1 0
chr3:133589625|133589842 hsa-miR-6872-5p 0 1 0
chr5:179729985|179730050 hsa-miR-6872-5p 0 1 0
chr6:44253327|44253668 hsa-miR-6872-5p 0 1 0
chr6:44253560|44253699 hsa-miR-6872-5p 0 1 0
chrX:2881122|2881263 hsa-miR-6872-5p 0 1 0
chr17:81246030|81246224 hsa-miR-6872-5p 0 1 0
chr11:65107616|65107727 hsa-miR-6872-5p 0 1 0
chr21:39204651|39204819 hsa-miR-6872-5p 0 1 0
chr14:23126894|23127127 hsa-miR-6872-5p 0 1 0
chr11:65107601|65107727 hsa-miR-6872-5p 0 1 0
chr2:1529570|1534285 hsa-miR-6872-5p 0 1 0
chr6:26124200|26124574 hsa-miR-6872-5p 0 1 0
chr5:179729932|179730050 hsa-miR-6872-5p 0 1 0
chr5:179729950|179730073 hsa-miR-6872-5p 0 1 0
chr8:86402019|86402203 hsa-miR-6872-5p 0 1 0
chr3:53228123|53228336 hsa-miR-6872-5p 0 1 0
chr2:237344484|237344815 hsa-miR-6872-5p 0 1 0
chr17:76009791|76009901 hsa-miR-6872-5p 0 1 0
chr11:65573435|65573611 hsa-miR-6872-5p 0 1 0
chr4:472980|473135 hsa-miR-6872-5p 0 1 0
chr20:35631945|35632227 hsa-miR-6872-5p 0 1 0
chr6:44253560|44253676 hsa-miR-6872-5p 0 1 0
chrX:153958085|153958249 hsa-miR-6872-5p 0 1 0
chr2:205796628|205796816 hsa-miR-6872-5p 0 1 0
chr16:2082626|2082693 hsa-miR-6872-5p 0 1 0
chr1:227919873|227919976 hsa-miR-6872-5p 0 1 0
chr17:76009806|76010003 hsa-miR-6872-5p 0 1 0
chr11:65573471|65573802 hsa-miR-6872-5p 0 1 0
chr7:149198417|149198486 hsa-miR-6872-5p 0 1 0
chr15:40853489|40853765 hsa-miR-6872-5p -10 1 0
chr1:109750307|109750376 hsa-miR-6872-5p 1 0 0
chr1:159918269|159918612 hsa-miR-6872-5p 1 0 0
chr6:31540506|31540602 hsa-miR-6872-5p 1 0 0
chr11:116832888|116832986 hsa-miR-6872-5p 1 0 0
chr1:1218536|1218886 hsa-miR-6872-5p 1 0 0
chr5:151667494|151669766 hsa-miR-6872-5p 1 0 0
chr16:2001004|2001133 hsa-miR-6872-5p 1 0 0
chr16:2001004|2001130 hsa-miR-6872-5p 1 0 0
chr20:25447750|25447895 hsa-miR-6872-5p 1 0 0
chr11:116832888|116832995 hsa-miR-6872-5p 1 0 0
chr2:27383400|27383549 hsa-miR-6872-5p 1 0 0
chr16:2000458|2001181 hsa-miR-6872-5p 1 0 0
chr17:76009806|76009985 hsa-miR-6872-5p 0 1 0
chr19:40233602|40233736 hsa-miR-6872-5p 0 1 0
chr9:135820887|135821122 hsa-miR-6872-5p 0 1 0
chr7:6409916|6410155 hsa-miR-6872-5p 0 1 0
chr6:2783406|2783521 hsa-miR-6872-5p 0 1 0
chr6:44251813|44252066 hsa-miR-6872-5p 0 1 0
chr6:44253545|44253699 hsa-miR-6872-5p 0 1 0
chr20:35631960|35632213 hsa-miR-6872-5p 0 1 0
chr11:65107595|65107727 hsa-miR-6872-5p 0 1 0
chr20:56518200|56518459 hsa-miR-6872-5p 0 1 0
chr3:53228102|53229038 hsa-miR-6872-5p 0 1 0
chr15:40853532|40853765 hsa-miR-6872-5p 0 1 0
chr3:47827368|47827477 hsa-miR-6872-5p 0 1 0
chr16:23574059|23574211 hsa-miR-6872-5p 0 1 0
chr17:76009791|76009904 hsa-miR-6872-5p 0 1 0
chr15:75658187|75658381 hsa-miR-6872-5p 0 1 0
chrX:2881097|2881263 hsa-miR-6872-5p 0 1 0
chrX:153958205|153958657 hsa-miR-6872-5p 0 1 0
chr19:50276764|50276901 hsa-miR-6872-5p 0 1 0
chrX:154469137|154469442 hsa-miR-6872-5p 0 1 0
chr5:179729950|179730060 hsa-miR-6872-5p 0 1 0
chr15:40853528|40853765 hsa-miR-6872-5p 0 1 0
chr15:40853496|40853765 hsa-miR-6872-5p 0 1 0
chr2:20202464|20202669 hsa-miR-6872-5p 0 1 0
chr15:45658907|45659118 hsa-miR-6872-5p 0 1 0
chr1:159918402|159918581 hsa-miR-6872-5p 1 0 0
chr20:63702225|63702392 hsa-miR-6872-5p 1 0 0
chr16:2001004|2001181 hsa-miR-6872-5p 1 0 0
chr10:6234163|6234350 hsa-miR-6872-5p 1 0 0
chr3:129908424|129908553 hsa-miR-6872-5p 1 0 0
chr16:23523944|23524003 hsa-miR-6872-5p 1 0 0
chr10:70152508|70152628 hsa-miR-6872-5p 1 0 0
chr12:8949135|8949272 hsa-miR-6872-5p 1 0 0
chr8:86334298|86334404 hsa-miR-6872-5p 1 0 0
chr19:35720277|35720376 hsa-miR-6872-5p 1 0 0
Target genes
miRNA Gene Gene Description HGNC ID details
hsa-miR-6872-5p CEBPD CCAAT enhancer binding protein delta HGNC:1835 details
hsa-miR-6872-5p SLC27A1 solute carrier family 27 member 1 HGNC:10995 details
hsa-miR-6872-5p BTG2 BTG anti-proliferation factor 2 HGNC:1131 details
hsa-miR-6872-5p DPF3 double PHD fingers 3 HGNC:17427 details
hsa-miR-6872-5p ZNF91 zinc finger protein 91 HGNC:13166 details
hsa-miR-6872-5p WNT4 Wnt family member 4 HGNC:12783 details
hsa-miR-6872-5p SKI SKI proto-oncogene HGNC:10896 details
hsa-miR-6872-5p KDSR 3-ketodihydrosphingosine reductase HGNC:4021 details
hsa-miR-6872-5p TTL tubulin tyrosine ligase HGNC:21586 details
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab