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miRTarBase - #MIRT476893 -
pre-miRNA Information
pre-miRNA hsa-mir-122   
Genomic Coordinates chr18: 58451074 - 58451158
Synonyms MIR122A, MIRN122, MIRN122A, hsa-mir-122, miRNA122, miRNA122A, MIR122
Description Homo sapiens miR-122 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-122-5p
Sequence 15| UGGAGUGUGACAAUGGUGUUUG |36
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 18 + 58451091 29233923 MiREDiBase
C-to-U 11 18 + 58451098 28550310 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1258166649 1 dbSNP
rs1426570658 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles

Circulating MicroRNA Expression Profiling
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol FBXO21   
Synonyms FBX21
Description F-box protein 21
Transcript NM_015002   
Other Transcripts NM_033624   
Expression
Putative miRNA Targets on FBXO21
3'UTR of FBXO21
(miRNA target sites are highlighted)		 
>FBXO21|NM_015002|3'UTR
   1 AGTCTAGAGAGGACATTGCACCTTTGCTGCTGCTGCTATCTTCCAAGAGAACGGGACTCCGGAAGAAGACGTCTCCACGG
  81 AGCCCTCGGGACCTGCTGCACCAGGAAAGCCACTCCACCAGTAGTGCTGGTTGCCTCCTACTAAGTTTAAATACCGTGTG
 161 CTCTTCCCCAGCTGCAAAGACAATGTTGCTCTCCGCCTACACTAGTGAATTAATCTGAAAGGCACTGTGTCAGTGGCATG
 241 GCTTGTATGCTTGTCCTGTGGTGACAGTTTGTGACATTCTGTCTTCATGAGGTCTCACAGTCGACGCTCCTGTAATCATT
 321 CTTTGTATTCACTCCATTCCCCTGTCTGTCTGCATTTGTCTCAGAACATTTCCTTGGCTGGACAGATGGGGTTATGCATT
 401 TGCAATAATTTCCTTCTGATTTCTCTGTGGAACGTGTTCGGTCCCGAGTGAGGACTGTGTGTCTTTTTACCCTGAAGTTA
 481 GTTGCATATTCAGAGGTAAAGTTGTGTGCTATCTTGGCAGCATCTTAGAGATGGAGACATTAACAAGCTAATGGTAATTA
 561 GAATCATTTGAATTTATTTTTTTCTAATATGTGAAACACAGATTTCAAGTGTTTTATCTTTTTTTTTTAAATTTAAATGG
 641 GAATATAACACAGTTTTCCCTTCCATATTCCTCTCTTGAGTTTATGCACATCTCTATAAATCATTAGTTTTCTATTTTAT
 721 TACATAAAATTCTTTTAGAAAATGCAAATAGTGAACTTTGTGAATGGATTTTTCCATACTCATCTACAATTCCTCCATTT
 801 TAAATGACTACTTTTATTTTTTAATTTAAAAAATCTACTTCAGTATCATGAGTAGGTCTTACATCAGTGATGGGTTCTTT
 881 TTGTAGTGAGACATACAAATCTGATGTTAATGTTTGCTCTTAGAAGTCATACTCCATGGTCTTCAAAGACCAAAAAATGA
 961 GGTTTTGCTTTTGTAATCAGGAAAAAAAAAAATTAATGAACCTTAAAAAAAAAAAAAAAGGTTTTGAAGGGAAAAAAAGT
1041 GGTTTCACACCTCTTGTTATTCCTTAGAGTCACTTCAAGGCCTGTTTGAATGTGGCAGGTTAGAAAGAGAGAGAATGTCT
1121 TTCATTTGAAGAGTGTTGGACTTGTGTGAAAGGAGATGTGCGTGTTGGAATCTGCTTTTCCAAGCCGCCAGGGTCCTGAC
1201 GGCAGCAGGACGAAGCCTGTTGTGGCGTCTTCTGGGAAAGCCTGACCGTGTGTTCGGACGGCACTGGCTCCTTTCCGAAG
1281 TTCTCAGTAACTGAGCCCAGAGTAACTGCACGCCTTTGTGCAGCTCTGGAGCTCCACCAACTCTCGGCCTGCCAGTTCTC
1361 AAGCGAGCTAATCTTGTCATTAATCGATAGAAGCTAACTTCCGAAGTTAGGACCTAGTTACTTTGCTCTCAACATTTAAA
1441 ATAATGCAGTTGCTCTAGTGAATGGGGCGTTAGGGGCCTGTCTCTGCACCTGTCTGTCCATCTGCATGCAGTATTCTCAC
1521 CCATGTTGAATGCCTGCTGCTTGTTTACCCTTTGGAAACCCTGGGGTGACCAAGGTTTGGAAAGCCACCTGAGACCACTT
1601 CATAGCAAGGGAAGGCTTTAAGCAGTTACTAGAAAGAGATGGGGATTTGGCCCCTGGCTCCTCCAGCCTGAATGAGCTAT
1681 TTAATCCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGCATCTGGAAACGTAACCACTCA
1761 CAGCACCTGGCCCGCCAAGGTTGGGAGGATTGTACACTACTTTCATTTAAAGGGGAAAGTTTGATAATACGGAATTAATT
1841 AATATGAATGAGATGCATTAATAAGAACCTGAGCATGCTGAGAGTTGCAATTGTTGGTTTTCTGGTTTGATTGATTTCCT
1921 TTTTTCTTAGACACATCAAAGTCAAGAAAGATGGTTTTACCTTTACTGACCCAGCTGTACATATGTATCTAGACTGTTTT
2001 TAAATGTCTTTCTTCATGAATGCTTCATGGGGCTCCAGGAAGCCTGTATCACCTGTGTAAGTTGGTATTTGGGCACTTTA
2081 TATTTTTCTAAAAACGTGTTTTGGATCCTGTACTCTAATAAATCATAAGTTTCTTTTTAAAAATTTTCCAAAACTTTTCT
2161 CCATTTTAAAAAGCCCTGTTATAAACGTTGAACTTTCACAATGTTAAAATGTTAAATATTTGGATATAGCAACTTCTTTT
2241 CTCTTCAAATGAATGCCAAGATTTTTTTGTACAATGATTAATAAATGGAACTTATCCAGAGAAACCAAAAAAAAAAAAAA
2321 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions (Predicted by miRanda)
IDDuplex structurePositionScoreMFE
1 
miRNA  3' guuuGUGGUAA----CAGUGUGAGGu 5'
              ::|: ||    ||||:||||| 
Target 5' tgttTGCTCTTAGAAGTCATACTCCa 3'
 		911 - 936 140.00 -17.30
2 
miRNA  3' guuuguGGUAACAG-UGUGAGGu 5'
                :||  ||| ||:|||| 
Target 5' gaggtcTCACAGTCGACGCTCCt 3'
 		289 - 311 136.00 -14.80
3 
miRNA  3' guUUGUGGUAACAGUGUGAGGu 5'
            :||| : |||| |||:||: 
Target 5' gtGACAGT-TTGTGACATTCTg 3'
 		261 - 281 131.00 -12.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26976178 1 COSMIC
COSN31570812 33 COSMIC
COSN20077846 37 COSMIC
COSN30628985 38 COSMIC
COSN31577975 54 COSMIC
COSN13371318 60 COSMIC
COSN30135596 99 COSMIC
COSN30539748 114 COSMIC
COSN31612231 155 COSMIC
COSN31593309 200 COSMIC
COSN20110180 618 COSMIC
COSN505736 979 COSMIC
COSN5931793 995 COSMIC
COSN20110176 1031 COSMIC
COSN8960362 1112 COSMIC
COSN6408124 1198 COSMIC
COSN5931792 1307 COSMIC
COSN20092658 1469 COSMIC
COSN14974110 1534 COSMIC
COSN25012126 1555 COSMIC
COSN21495806 1560 COSMIC
COSN20617250 1866 COSMIC
COSN8585418 2020 COSMIC
COSN31520839 2144 COSMIC
COSN15306207 2150 COSMIC
COSN22985907 2159 COSMIC
COSN28679913 2187 COSMIC
COSN31582939 2201 COSMIC
COSN26650111 2256 COSMIC
COSN28733890 2269 COSMIC
COSN26553576 2272 COSMIC
COSN15743991 2276 COSMIC
COSN25709310 2355 COSMIC
COSN22420207 2423 COSMIC
COSN29166889 2427 COSMIC
COSN27770216 2591 COSMIC
COSN15745757 2654 COSMIC
COSN16450128 2787 COSMIC
COSN20599322 2924 COSMIC
COSN6408123 3384 COSMIC
COSN29878581 3391 COSMIC
COSN16333355 3593 COSMIC
COSN5316214 3671 COSMIC
COSN29068602 3768 COSMIC
COSN15747056 3771 COSMIC
COSN7609534 3882 COSMIC
COSN16333552 3939 COSMIC
COSN20602386 4039 COSMIC
rs3741472 3179 GWAS
rs73206033 3350 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1245263965 1 dbSNP
rs776485711 4 dbSNP
rs768635405 5 dbSNP
rs1483582918 7 dbSNP
rs1488846530 8 dbSNP
rs201541949 9 dbSNP
rs1215031228 12 dbSNP
rs780469332 15 dbSNP
rs772245855 17 dbSNP
rs368453191 27 dbSNP
rs1369279148 28 dbSNP
rs1281020640 29 dbSNP
rs779238459 33 dbSNP
rs757795966 38 dbSNP
rs1398902585 41 dbSNP
rs749828449 42 dbSNP
rs1299841168 43 dbSNP
rs1313077437 46 dbSNP
rs778098926 49 dbSNP
rs371485880 52 dbSNP
rs1032588561 53 dbSNP
rs868354353 56 dbSNP
rs1226385244 59 dbSNP
rs745369198 60 dbSNP
rs1317372390 61 dbSNP
rs1241133178 62 dbSNP
rs146699544 66 dbSNP
rs534569031 70 dbSNP
rs1374515379 71 dbSNP
rs1216038669 78 dbSNP
rs912637758 79 dbSNP
rs565656700 87 dbSNP
rs779465939 88 dbSNP
rs552030026 95 dbSNP
rs1051653041 105 dbSNP
rs1160949451 108 dbSNP
rs1379044085 113 dbSNP
rs1418554414 114 dbSNP
rs367549767 120 dbSNP
rs1360471738 124 dbSNP
rs921437326 125 dbSNP
rs1301999646 136 dbSNP
rs1169663046 140 dbSNP
rs974263649 141 dbSNP
rs941629842 147 dbSNP
rs569756225 156 dbSNP
rs771398032 158 dbSNP
rs749666377 161 dbSNP
rs1314097162 163 dbSNP
rs1208322631 171 dbSNP
rs1237215404 176 dbSNP
rs778152956 181 dbSNP
rs887207780 183 dbSNP
rs1047016894 184 dbSNP
rs756326832 188 dbSNP
rs117329242 190 dbSNP
rs980555433 191 dbSNP
rs1196687275 194 dbSNP
rs1426699373 195 dbSNP
rs529954135 198 dbSNP
rs969170579 223 dbSNP
rs1429109379 224 dbSNP
rs189536832 231 dbSNP
rs1250042536 241 dbSNP
rs991363146 249 dbSNP
rs1227324631 250 dbSNP
rs1375986915 265 dbSNP
rs937282797 267 dbSNP
rs560821019 268 dbSNP
rs1336174097 276 dbSNP
rs1275471482 280 dbSNP
rs1294559290 301 dbSNP
rs185116394 302 dbSNP
rs1217583244 306 dbSNP
rs892404739 314 dbSNP
rs1354379172 324 dbSNP
rs1278182746 330 dbSNP
rs1308359751 332 dbSNP
rs1329144353 340 dbSNP
rs1256560752 344 dbSNP
rs4767501 344 dbSNP
rs1194821586 345 dbSNP
rs1249014476 346 dbSNP
rs1476740363 347 dbSNP
rs1190201824 351 dbSNP
rs967115754 367 dbSNP
rs1419777020 372 dbSNP
rs1478608139 376 dbSNP
rs779549151 381 dbSNP
rs1020462338 386 dbSNP
rs1394068499 387 dbSNP
rs1399316292 391 dbSNP
rs1297452306 392 dbSNP
rs998861899 402 dbSNP
rs1391076771 403 dbSNP
rs781548345 404 dbSNP
rs1461878429 409 dbSNP
rs755171668 416 dbSNP
rs932748533 423 dbSNP
rs1220725318 431 dbSNP
rs1167128936 432 dbSNP
rs755592622 433 dbSNP
rs61938670 436 dbSNP
rs371804453 439 dbSNP
rs559689534 440 dbSNP
rs1450456452 446 dbSNP
rs1439834819 469 dbSNP
rs1220115781 470 dbSNP
rs181304606 474 dbSNP
rs1478576334 487 dbSNP
rs1028689339 492 dbSNP
rs1038521547 504 dbSNP
rs997091179 506 dbSNP
rs1164841192 517 dbSNP
rs900096876 530 dbSNP
rs1404698757 532 dbSNP
rs1275623792 536 dbSNP
rs1230863633 538 dbSNP
rs908780451 539 dbSNP
rs1019769362 546 dbSNP
rs1333533165 550 dbSNP
rs1296543860 551 dbSNP
rs1340210522 552 dbSNP
rs1245975143 554 dbSNP
rs1286338458 567 dbSNP
rs1354783264 569 dbSNP
rs1279695556 577 dbSNP
rs1286049597 578 dbSNP
rs1213877320 584 dbSNP
rs773268093 584 dbSNP
rs939028260 585 dbSNP
rs927621758 587 dbSNP
rs980481718 588 dbSNP
rs1008813577 590 dbSNP
rs969137753 620 dbSNP
rs1472395903 627 dbSNP
rs577220783 628 dbSNP
rs1421584513 629 dbSNP
rs200178847 629 dbSNP
rs540355081 629 dbSNP
rs71783953 629 dbSNP
rs956784641 629 dbSNP
rs989292127 629 dbSNP
rs1396518395 631 dbSNP
rs1030917672 632 dbSNP
rs1356538620 637 dbSNP
rs1237249432 645 dbSNP
rs543995331 651 dbSNP
rs1284691566 653 dbSNP
rs931454417 665 dbSNP
rs1253696926 670 dbSNP
rs1460914293 671 dbSNP
rs898483204 677 dbSNP
rs1029632916 678 dbSNP
rs1239924749 684 dbSNP
rs1437766889 687 dbSNP
rs1176787945 689 dbSNP
rs1390086353 695 dbSNP
rs763881928 702 dbSNP
rs1400386725 717 dbSNP
rs1414258215 723 dbSNP
rs937236892 724 dbSNP
rs140806648 732 dbSNP
rs150944126 737 dbSNP
rs1038446891 740 dbSNP
rs1307834596 747 dbSNP
rs1362312005 750 dbSNP
rs1181475817 755 dbSNP
rs1253876839 762 dbSNP
rs1343924262 766 dbSNP
rs775181037 778 dbSNP
rs1259762519 782 dbSNP
rs535319190 792 dbSNP
rs767153142 798 dbSNP
rs34790541 805 dbSNP
rs1197959035 811 dbSNP
rs113955663 818 dbSNP
rs1433814541 823 dbSNP
rs1201179991 826 dbSNP
rs1376075746 828 dbSNP
rs957139822 833 dbSNP
rs939605309 834 dbSNP
rs921566721 835 dbSNP
rs974421442 836 dbSNP
rs1044768866 841 dbSNP
rs964248006 842 dbSNP
rs1464433472 848 dbSNP
rs947723300 851 dbSNP
rs367935689 855 dbSNP
rs538366267 857 dbSNP
rs1387993131 862 dbSNP
rs768168006 862 dbSNP
rs1330083704 867 dbSNP
rs879175681 871 dbSNP
rs989270743 874 dbSNP
rs569700341 877 dbSNP
rs951627596 881 dbSNP
rs1197822375 883 dbSNP
rs923779756 883 dbSNP
rs1265959139 887 dbSNP
rs1489457817 899 dbSNP
rs1234661838 901 dbSNP
rs987379468 902 dbSNP
rs1372899837 903 dbSNP
rs574425114 916 dbSNP
rs1194628830 926 dbSNP
rs1028891166 929 dbSNP
rs1440052724 931 dbSNP
rs1477041208 932 dbSNP
rs996789596 936 dbSNP
rs1025834987 944 dbSNP
rs1369490185 951 dbSNP
rs1459905082 953 dbSNP
rs1319019764 962 dbSNP
rs1402546495 978 dbSNP
rs1389419989 979 dbSNP
rs1382993677 980 dbSNP
rs1158279233 981 dbSNP
rs1435648284 982 dbSNP
rs1299618406 991 dbSNP
rs1217774122 993 dbSNP
rs1338056107 993 dbSNP
rs1397256930 994 dbSNP
rs1192210596 995 dbSNP
rs1477972381 997 dbSNP
rs1243235296 998 dbSNP
rs1313164951 998 dbSNP
rs1194640482 999 dbSNP
rs1444780312 1001 dbSNP
rs1460981698 1004 dbSNP
rs1264842780 1005 dbSNP
rs1283019583 1007 dbSNP
rs12228888 1019 dbSNP
rs1217519890 1020 dbSNP
rs1253755594 1020 dbSNP
rs36075086 1020 dbSNP
rs370693551 1020 dbSNP
rs562134448 1020 dbSNP
rs57717777 1020 dbSNP
rs1211139176 1022 dbSNP
rs201744776 1031 dbSNP
rs142024020 1032 dbSNP
rs398116908 1032 dbSNP
rs964048911 1032 dbSNP
rs995536284 1032 dbSNP
rs898604085 1033 dbSNP
rs1047688632 1036 dbSNP
rs397825210 1039 dbSNP
rs5801216 1039 dbSNP
rs945909738 1040 dbSNP
rs1055683480 1050 dbSNP
rs1003773280 1053 dbSNP
rs1001498756 1054 dbSNP
rs1288254293 1055 dbSNP
rs907248609 1056 dbSNP
rs1256865653 1063 dbSNP
rs1484424969 1067 dbSNP
rs1180546377 1068 dbSNP
rs762239254 1074 dbSNP
rs1243059184 1076 dbSNP
rs1440862955 1079 dbSNP
rs1179924428 1080 dbSNP
rs1046059599 1086 dbSNP
rs12298149 1095 dbSNP
rs1324759475 1102 dbSNP
rs1297723470 1112 dbSNP
rs914915900 1115 dbSNP
rs1335852815 1117 dbSNP
rs1377458807 1121 dbSNP
rs1377545902 1125 dbSNP
rs1053501223 1129 dbSNP
rs1311496169 1131 dbSNP
rs544431879 1134 dbSNP
rs1374739223 1144 dbSNP
rs935089970 1145 dbSNP
rs923775261 1153 dbSNP
rs913046543 1158 dbSNP
rs1420758716 1160 dbSNP
rs759088079 1161 dbSNP
rs1458566017 1162 dbSNP
rs1201047207 1168 dbSNP
rs1474744978 1186 dbSNP
rs188640216 1187 dbSNP
rs974670689 1192 dbSNP
rs1426757228 1198 dbSNP
rs567108494 1200 dbSNP
rs547327760 1201 dbSNP
rs921680735 1207 dbSNP
rs575465626 1211 dbSNP
rs963973859 1212 dbSNP
rs965693434 1219 dbSNP
rs1353937131 1226 dbSNP
rs527578857 1227 dbSNP
rs1060232 1229 dbSNP
rs1221934384 1233 dbSNP
rs562788823 1235 dbSNP
rs913017373 1247 dbSNP
rs911600772 1248 dbSNP
rs987439939 1250 dbSNP
rs544156604 1255 dbSNP
rs951690408 1256 dbSNP
rs1026210304 1259 dbSNP
rs559490760 1260 dbSNP
rs773830855 1264 dbSNP
rs1034389724 1266 dbSNP
rs1247979059 1267 dbSNP
rs1277614462 1269 dbSNP
rs771365920 1270 dbSNP
rs1060233 1275 dbSNP
rs532512293 1276 dbSNP
rs1423949511 1280 dbSNP
rs1478680292 1284 dbSNP
rs893450127 1286 dbSNP
rs1311311356 1295 dbSNP
rs1447655631 1296 dbSNP
rs35295142 1302 dbSNP
rs369653550 1306 dbSNP
rs1355461345 1309 dbSNP
rs1324241713 1310 dbSNP
rs1010543565 1311 dbSNP
rs891727826 1312 dbSNP
rs1302774571 1328 dbSNP
rs1054248993 1336 dbSNP
rs563741666 1340 dbSNP
rs935037012 1345 dbSNP
rs1229414239 1346 dbSNP
rs1339255615 1346 dbSNP
rs1475910364 1347 dbSNP
rs902248733 1354 dbSNP
rs921795536 1362 dbSNP
rs1038798363 1364 dbSNP
rs921770352 1365 dbSNP
rs944461648 1376 dbSNP
rs1234375208 1378 dbSNP
rs543910588 1385 dbSNP
rs764210144 1386 dbSNP
rs1273765650 1389 dbSNP
rs1241340504 1394 dbSNP
rs1214340648 1395 dbSNP
rs941965380 1402 dbSNP
rs1291573556 1403 dbSNP
rs909861377 1405 dbSNP
rs983151020 1406 dbSNP
rs575129326 1410 dbSNP
rs184708731 1425 dbSNP
rs1361331259 1430 dbSNP
rs541366736 1434 dbSNP
rs962850092 1448 dbSNP
rs1034505725 1452 dbSNP
rs1026140018 1462 dbSNP
rs1449271399 1467 dbSNP
rs770141983 1468 dbSNP
rs980145468 1469 dbSNP
rs970853924 1473 dbSNP
rs1023823622 1475 dbSNP
rs971521521 1477 dbSNP
rs572662151 1488 dbSNP
rs111627657 1490 dbSNP
rs1024706553 1500 dbSNP
rs558283915 1514 dbSNP
rs894045017 1521 dbSNP
rs1032624896 1522 dbSNP
rs527306864 1523 dbSNP
rs1463538288 1524 dbSNP
rs763302152 1532 dbSNP
rs891670537 1533 dbSNP
rs1032920349 1541 dbSNP
rs193063380 1544 dbSNP
rs1163521019 1554 dbSNP
rs1189426276 1565 dbSNP
rs999590541 1587 dbSNP
rs1000152550 1598 dbSNP
rs748514817 1603 dbSNP
rs900317868 1609 dbSNP
rs1381024719 1610 dbSNP
rs933078775 1611 dbSNP
rs1157016066 1613 dbSNP
rs1384610306 1622 dbSNP
rs1415390672 1625 dbSNP
rs189858062 1629 dbSNP
rs185778889 1633 dbSNP
rs1404463053 1637 dbSNP
rs1452593828 1639 dbSNP
rs1038861217 1647 dbSNP
rs3741468 1650 dbSNP
rs112840969 1653 dbSNP
rs1467117634 1655 dbSNP
rs755226859 1664 dbSNP
rs1047814355 1666 dbSNP
rs983420310 1668 dbSNP
rs1261056141 1673 dbSNP
rs148490942 1679 dbSNP
rs1317690482 1682 dbSNP
rs1286625330 1691 dbSNP
rs553858978 1692 dbSNP
rs974278734 1700 dbSNP
rs1363381263 1703 dbSNP
rs1478484455 1706 dbSNP
rs941647538 1710 dbSNP
rs1174640483 1711 dbSNP
rs927438818 1722 dbSNP
rs1427670694 1731 dbSNP
rs1304701264 1732 dbSNP
rs980260157 1737 dbSNP
rs971845887 1738 dbSNP
rs1403154299 1746 dbSNP
rs534351027 1749 dbSNP
rs757146114 1750 dbSNP
rs1024399386 1753 dbSNP
rs989334045 1754 dbSNP
rs753751174 1761 dbSNP
rs866171360 1764 dbSNP
rs1234987201 1766 dbSNP
rs1281033748 1767 dbSNP
rs1322521967 1768 dbSNP
rs1219083765 1770 dbSNP
rs3741469 1773 dbSNP
rs1000101860 1774 dbSNP
rs552308151 1775 dbSNP
rs1452357779 1777 dbSNP
rs1201835231 1779 dbSNP
rs759559698 1785 dbSNP
rs572636766 1792 dbSNP
rs532565637 1795 dbSNP
rs1156504835 1802 dbSNP
rs1033003917 1804 dbSNP
rs773096491 1806 dbSNP
rs900433961 1808 dbSNP
rs999785007 1815 dbSNP
rs570048061 1816 dbSNP
rs1418767733 1821 dbSNP
rs966744102 1824 dbSNP
rs1030011718 1825 dbSNP
rs1008739290 1830 dbSNP
rs1388048084 1831 dbSNP
rs1300900545 1837 dbSNP
rs890319641 1838 dbSNP
rs1344541068 1843 dbSNP
rs763925603 1845 dbSNP
rs1400320784 1848 dbSNP
rs756005158 1853 dbSNP
rs866840303 1854 dbSNP
rs1305658211 1868 dbSNP
rs1226637404 1873 dbSNP
rs550346570 1875 dbSNP
rs993676402 1881 dbSNP
rs898821144 1887 dbSNP
rs1266965308 1888 dbSNP
rs1266613927 1890 dbSNP
rs1490248154 1896 dbSNP
rs557910766 1897 dbSNP
rs1486237445 1906 dbSNP
rs1194785941 1912 dbSNP
rs530172102 1924 dbSNP
rs1038786484 1926 dbSNP
rs1193060746 1932 dbSNP
rs1369612852 1935 dbSNP
rs1425992203 1937 dbSNP
rs1005999678 1939 dbSNP
rs1364497232 1949 dbSNP
rs1419964499 1954 dbSNP
rs887655420 1966 dbSNP
rs1359582017 1968 dbSNP
rs941590406 1970 dbSNP
rs1342206734 1981 dbSNP
rs1248175581 1982 dbSNP
rs927549520 1984 dbSNP
rs1358935059 1989 dbSNP
rs1310911130 1998 dbSNP
rs752459771 1999 dbSNP
rs1382236678 2009 dbSNP
rs1363454220 2010 dbSNP
rs1186362673 2015 dbSNP
rs1257410937 2016 dbSNP
rs950240618 2017 dbSNP
rs917447434 2024 dbSNP
rs1046414430 2025 dbSNP
rs949395256 2027 dbSNP
rs1343142468 2038 dbSNP
rs374444272 2041 dbSNP
rs1452706279 2044 dbSNP
rs1303212496 2048 dbSNP
rs988893871 2050 dbSNP
rs1450380153 2061 dbSNP
rs561479387 2067 dbSNP
rs916660347 2069 dbSNP
rs956349430 2095 dbSNP
rs767208315 2096 dbSNP
rs568206851 2097 dbSNP
rs964589627 2109 dbSNP
rs1017525647 2114 dbSNP
rs1256985392 2115 dbSNP
rs1463009279 2126 dbSNP
rs548235508 2126 dbSNP
rs1202310698 2129 dbSNP
rs925482285 2138 dbSNP
rs1457820862 2142 dbSNP
rs762216825 2143 dbSNP
rs1376931758 2144 dbSNP
rs1405255732 2145 dbSNP
rs954549652 2152 dbSNP
rs541582587 2154 dbSNP
rs527999269 2163 dbSNP
rs193008368 2167 dbSNP
rs1176455573 2169 dbSNP
rs1431126197 2170 dbSNP
rs1468075567 2173 dbSNP
rs1263918433 2177 dbSNP
rs1401013459 2178 dbSNP
rs993230855 2182 dbSNP
rs545362716 2183 dbSNP
rs898935886 2186 dbSNP
rs1258517797 2187 dbSNP
rs1213398054 2197 dbSNP
rs1031024376 2201 dbSNP
rs1482485949 2211 dbSNP
rs773885915 2215 dbSNP
rs997123629 2217 dbSNP
rs964378093 2223 dbSNP
rs1263051620 2225 dbSNP
rs1255846535 2259 dbSNP
rs1037287897 2260 dbSNP
rs1205956546 2262 dbSNP
rs1228760797 2262 dbSNP
rs1230696931 2269 dbSNP
rs1309822117 2269 dbSNP
rs1191380636 2271 dbSNP
rs1017303846 2272 dbSNP
rs1005928070 2279 dbSNP
rs1424170987 2296 dbSNP
rs1001835734 2308 dbSNP
rs1217503465 2320 dbSNP
rs904903684 2329 dbSNP
rs1172560736 2330 dbSNP
rs1355632212 2332 dbSNP
rs1314335508 2334 dbSNP
rs1441622720 2347 dbSNP
rs1044651794 2358 dbSNP
rs1303981862 2358 dbSNP
rs866742885 2360 dbSNP
rs950375619 2363 dbSNP
rs1393992990 2375 dbSNP
rs1047577349 2383 dbSNP
rs1340612790 2385 dbSNP
rs917412107 2386 dbSNP
rs1053710319 2396 dbSNP
rs1306410218 2401 dbSNP
rs1463434417 2406 dbSNP
rs1293419180 2416 dbSNP
rs1349577639 2430 dbSNP
rs1489723377 2434 dbSNP
rs934710041 2434 dbSNP
rs1371299940 2438 dbSNP
rs926029360 2439 dbSNP
rs1045713903 2442 dbSNP
rs531790459 2452 dbSNP
rs575672870 2453 dbSNP
rs1164313690 2458 dbSNP
rs1190331396 2463 dbSNP
rs964703585 2476 dbSNP
rs765852458 2477 dbSNP
rs910578790 2480 dbSNP
rs987391216 2488 dbSNP
rs1327354945 2492 dbSNP
rs1433409062 2494 dbSNP
rs954799722 2495 dbSNP
rs1026121516 2499 dbSNP
rs763388366 2508 dbSNP
rs1361884274 2510 dbSNP
rs993737289 2513 dbSNP
rs569079931 2515 dbSNP
rs1356766754 2519 dbSNP
rs1015961345 2521 dbSNP
rs1221250821 2523 dbSNP
rs1001950379 2524 dbSNP
rs904851362 2525 dbSNP
rs1481876692 2526 dbSNP
rs1448519022 2528 dbSNP
rs1025091898 2543 dbSNP
rs1241393356 2548 dbSNP
rs1473089695 2551 dbSNP
rs1034419975 2555 dbSNP
rs1256730721 2559 dbSNP
rs1184230864 2562 dbSNP
rs1387139578 2564 dbSNP
rs1014481138 2566 dbSNP
rs1163168631 2569 dbSNP
rs34882593 2585 dbSNP
rs896075332 2593 dbSNP
rs936781872 2597 dbSNP
rs1402743410 2598 dbSNP
rs1053253003 2600 dbSNP
rs934808245 2604 dbSNP
rs904731041 2609 dbSNP
rs967307850 2611 dbSNP
rs1242132517 2612 dbSNP
rs1279760013 2615 dbSNP
rs542316127 2616 dbSNP
rs1221793779 2619 dbSNP
rs976342965 2621 dbSNP
rs964305557 2623 dbSNP
rs1017239747 2624 dbSNP
rs573360510 2626 dbSNP
rs149725284 2627 dbSNP
rs1183075016 2634 dbSNP
rs1330603808 2643 dbSNP
rs1471297751 2647 dbSNP
rs1157143521 2648 dbSNP
rs1461946150 2651 dbSNP
rs984483212 2653 dbSNP
rs770166013 2654 dbSNP
rs1404614481 2655 dbSNP
rs1451208860 2663 dbSNP
rs1328957176 2668 dbSNP
rs1337124410 2679 dbSNP
rs910523850 2681 dbSNP
rs1439538101 2684 dbSNP
rs1278628312 2685 dbSNP
rs1395301401 2686 dbSNP
rs1323983904 2687 dbSNP
rs987893973 2688 dbSNP
rs1165127845 2690 dbSNP
rs1471907475 2697 dbSNP
rs1225175180 2700 dbSNP
rs933210789 2708 dbSNP
rs919173274 2714 dbSNP
rs1199902713 2719 dbSNP
rs1251365069 2724 dbSNP
rs951813686 2724 dbSNP
rs748569848 2728 dbSNP
rs3741470 2734 dbSNP
rs1251450446 2736 dbSNP
rs1480962462 2738 dbSNP
rs993338160 2745 dbSNP
rs116960429 2746 dbSNP
rs186689325 2748 dbSNP
rs980477266 2750 dbSNP
rs183599993 2752 dbSNP
rs969124041 2755 dbSNP
rs1055146897 2756 dbSNP
rs936690743 2764 dbSNP
rs1406469048 2769 dbSNP
rs1024620384 2774 dbSNP
rs1013672969 2777 dbSNP
rs570070147 2781 dbSNP
rs1228038224 2787 dbSNP
rs1253048260 2790 dbSNP
rs896036324 2791 dbSNP
rs1194212744 2794 dbSNP
rs1032337311 2795 dbSNP
rs999130794 2796 dbSNP
rs1201997806 2797 dbSNP
rs1240847675 2798 dbSNP
rs747159841 2799 dbSNP
rs368104451 2807 dbSNP
rs1433006032 2815 dbSNP
rs550161100 2824 dbSNP
rs945560131 2825 dbSNP
rs1459970363 2829 dbSNP
rs779594452 2834 dbSNP
rs1308343724 2843 dbSNP
rs191874492 2844 dbSNP
rs1441501707 2862 dbSNP
rs1373134222 2863 dbSNP
rs140781202 2873 dbSNP
rs1364699497 2874 dbSNP
rs1382639673 2875 dbSNP
rs1043258940 2877 dbSNP
rs147273113 2878 dbSNP
rs910829781 2881 dbSNP
rs1297008086 2882 dbSNP
rs532676958 2883 dbSNP
rs1390218563 2885 dbSNP
rs1488349995 2887 dbSNP
rs1206102657 2888 dbSNP
rs772251411 2889 dbSNP
rs1427290398 2893 dbSNP
rs889201166 2896 dbSNP
rs1159354603 2897 dbSNP
rs1421826286 2898 dbSNP
rs745931273 2910 dbSNP
rs1349003917 2912 dbSNP
rs933307027 2922 dbSNP
rs919306855 2929 dbSNP
rs777806577 2937 dbSNP
rs1382648020 2941 dbSNP
rs527922072 2945 dbSNP
rs971939753 2946 dbSNP
rs569167354 2947 dbSNP
rs1381607871 2948 dbSNP
rs1337370126 2952 dbSNP
rs1383607235 2962 dbSNP
rs1248333124 2964 dbSNP
rs1378822524 2969 dbSNP
rs1026062270 2974 dbSNP
rs565328973 2977 dbSNP
rs756025016 2978 dbSNP
rs1244366155 2979 dbSNP
rs557372567 2981 dbSNP
rs752513036 2986 dbSNP
rs1255475694 2987 dbSNP
rs969125966 2990 dbSNP
rs749990893 2991 dbSNP
rs780928403 2995 dbSNP
rs545730361 3005 dbSNP
rs1160964233 3008 dbSNP
rs894377190 3009 dbSNP
rs1032957666 3010 dbSNP
rs1261887868 3011 dbSNP
rs1000865147 3022 dbSNP
rs1351100504 3023 dbSNP
rs991961886 3035 dbSNP
rs956555258 3043 dbSNP
rs531836616 3047 dbSNP
rs999078273 3048 dbSNP
rs1234796549 3049 dbSNP
rs945458806 3061 dbSNP
rs1315501868 3063 dbSNP
rs968975852 3064 dbSNP
rs1349886635 3070 dbSNP
rs1021760357 3074 dbSNP
rs1007738004 3076 dbSNP
rs377529232 3076 dbSNP
rs574218070 3076 dbSNP
rs1236412919 3077 dbSNP
rs186936711 3080 dbSNP
rs1319113115 3083 dbSNP
rs1402054626 3084 dbSNP
rs542181609 3085 dbSNP
rs1176886911 3086 dbSNP
rs3741471 3087 dbSNP
rs1468186337 3090 dbSNP
rs1175333115 3095 dbSNP
rs930287317 3100 dbSNP
rs918926909 3109 dbSNP
rs1300104114 3112 dbSNP
rs1427796492 3126 dbSNP
rs1348880015 3131 dbSNP
rs897809028 3134 dbSNP
rs183585739 3139 dbSNP
rs1284365331 3140 dbSNP
rs1478024571 3145 dbSNP
rs1373117300 3148 dbSNP
rs1195268973 3149 dbSNP
rs1347890953 3152 dbSNP
rs749875588 3153 dbSNP
rs765793391 3163 dbSNP
rs796738441 3174 dbSNP
rs560120368 3178 dbSNP
rs3741472 3179 dbSNP
rs1482540825 3184 dbSNP
rs557623139 3185 dbSNP
rs1270749273 3193 dbSNP
rs1000521567 3194 dbSNP
rs1218544879 3197 dbSNP
rs1340046706 3198 dbSNP
rs1270796401 3199 dbSNP
rs1368908817 3200 dbSNP
rs1429375276 3201 dbSNP
rs1367819303 3212 dbSNP
rs968041534 3212 dbSNP
rs947873408 3213 dbSNP
rs917780946 3216 dbSNP
rs36046246 3221 dbSNP
rs1338623199 3222 dbSNP
rs1294794812 3224 dbSNP
rs992304127 3225 dbSNP
rs956495035 3226 dbSNP
rs538149338 3228 dbSNP
rs923577535 3231 dbSNP
rs901923687 3232 dbSNP
rs1489793843 3234 dbSNP
rs1040472948 3235 dbSNP
rs191929630 3236 dbSNP
rs1242566778 3237 dbSNP
rs1486826178 3240 dbSNP
rs968923464 3241 dbSNP
rs777138587 3242 dbSNP
rs1415686516 3255 dbSNP
rs1021874341 3258 dbSNP
rs1332650906 3259 dbSNP
rs556619823 3260 dbSNP
rs536674029 3263 dbSNP
rs370225153 3264 dbSNP
rs1346255110 3268 dbSNP
rs1433474192 3269 dbSNP
rs1319178308 3274 dbSNP
rs1476564222 3285 dbSNP
rs918906644 3293 dbSNP
rs1316642523 3295 dbSNP
rs1030530042 3307 dbSNP
rs997982383 3311 dbSNP
rs1036419454 3314 dbSNP
rs1227492006 3323 dbSNP
rs77840118 3328 dbSNP
rs1036281496 3333 dbSNP
rs1448571943 3335 dbSNP
rs1213520944 3337 dbSNP
rs1006186436 3339 dbSNP
rs752919011 3342 dbSNP
rs73206033 3350 dbSNP
rs143937326 3352 dbSNP
rs1471944440 3359 dbSNP
rs1209190527 3375 dbSNP
rs1438284127 3376 dbSNP
rs1259918098 3377 dbSNP
rs1409133812 3377 dbSNP
rs1200543559 3378 dbSNP
rs561495337 3383 dbSNP
rs369471898 3384 dbSNP
rs61938669 3389 dbSNP
rs1234093853 3390 dbSNP
rs12824193 3390 dbSNP
rs28524926 3391 dbSNP
rs150469882 3392 dbSNP
rs1282733889 3394 dbSNP
rs78605938 3394 dbSNP
rs1447772504 3396 dbSNP
rs1338171503 3402 dbSNP
rs1336814088 3410 dbSNP
rs1333941924 3412 dbSNP
rs1168906135 3414 dbSNP
rs1187093233 3414 dbSNP
rs1204345352 3414 dbSNP
rs1226415162 3414 dbSNP
rs1267368320 3414 dbSNP
rs1279819268 3414 dbSNP
rs1280790121 3414 dbSNP
rs1324219790 3414 dbSNP
rs1338293421 3414 dbSNP
rs1352552570 3414 dbSNP
rs1399402371 3414 dbSNP
rs1413465585 3414 dbSNP
rs1422982771 3414 dbSNP
rs1446790052 3414 dbSNP
rs1471324273 3414 dbSNP
rs761025781 3414 dbSNP
rs1008385697 3416 dbSNP
rs112159160 3420 dbSNP
rs571813677 3427 dbSNP
rs551518453 3434 dbSNP
rs1407717481 3440 dbSNP
rs1056318017 3445 dbSNP
rs1287528445 3445 dbSNP
rs935034171 3446 dbSNP
rs11068363 3448 dbSNP
rs1411225029 3449 dbSNP
rs188253376 3453 dbSNP
rs967701118 3457 dbSNP
rs1239837566 3458 dbSNP
rs776746605 3459 dbSNP
rs369864131 3464 dbSNP
rs796362536 3464 dbSNP
rs1273906842 3467 dbSNP
rs910916005 3471 dbSNP
rs1203406535 3477 dbSNP
rs986777658 3482 dbSNP
rs184056609 3483 dbSNP
rs978671061 3493 dbSNP
rs953669384 3499 dbSNP
rs1486148197 3501 dbSNP
rs1222424917 3502 dbSNP
rs191815400 3508 dbSNP
rs1020230632 3517 dbSNP
rs976281238 3522 dbSNP
rs966058109 3523 dbSNP
rs1374508507 3529 dbSNP
rs1365952295 3532 dbSNP
rs1311972517 3534 dbSNP
rs746010880 3535 dbSNP
rs1445188655 3539 dbSNP
rs1224362825 3546 dbSNP
rs1018945964 3553 dbSNP
rs1270875532 3553 dbSNP
rs1344456677 3553 dbSNP
rs1241358143 3555 dbSNP
rs1014955077 3558 dbSNP
rs1376842560 3559 dbSNP
rs1212005168 3561 dbSNP
rs1007606422 3564 dbSNP
rs1451573536 3564 dbSNP
rs778810720 3576 dbSNP
rs1049715178 3577 dbSNP
rs1447200967 3579 dbSNP
rs1437992143 3580 dbSNP
rs887765588 3589 dbSNP
rs769756659 3590 dbSNP
rs1012553878 3591 dbSNP
rs528888193 3593 dbSNP
rs138285940 3594 dbSNP
rs1291593392 3595 dbSNP
rs748015118 3596 dbSNP
rs898058423 3599 dbSNP
rs1320263835 3602 dbSNP
rs116420127 3615 dbSNP
rs1297052174 3617 dbSNP
rs1360450341 3619 dbSNP
rs935168899 3623 dbSNP
rs902384791 3624 dbSNP
rs1206228546 3627 dbSNP
rs1043475245 3628 dbSNP
rs937085209 3638 dbSNP
rs946479342 3639 dbSNP
rs749714385 3649 dbSNP
rs925783563 3657 dbSNP
rs1162306793 3659 dbSNP
rs1253576736 3664 dbSNP
rs1367651023 3669 dbSNP
rs1454169666 3669 dbSNP
rs540368956 3672 dbSNP
rs1386363260 3689 dbSNP
rs185468745 3698 dbSNP
rs780981917 3702 dbSNP
rs1383676334 3710 dbSNP
rs976642655 3713 dbSNP
rs1221073649 3716 dbSNP
rs1354751659 3722 dbSNP
rs1340246360 3724 dbSNP
rs1240217060 3727 dbSNP
rs180863654 3730 dbSNP
rs1327732469 3735 dbSNP
rs1018914849 3738 dbSNP
rs962183117 3739 dbSNP
rs1015074723 3744 dbSNP
rs1353533597 3753 dbSNP
rs1179738632 3757 dbSNP
rs544298978 3761 dbSNP
rs866541419 3768 dbSNP
rs1221489665 3769 dbSNP
rs1364868082 3789 dbSNP
rs1409596249 3795 dbSNP
rs952147975 3796 dbSNP
rs1024017314 3800 dbSNP
rs1467710878 3802 dbSNP
rs11068362 3805 dbSNP
rs898032626 3807 dbSNP
rs761667588 3809 dbSNP
rs1014519401 3810 dbSNP
rs1034938299 3825 dbSNP
rs575489977 3829 dbSNP
rs754830101 3830 dbSNP
rs895452783 3832 dbSNP
rs1228294897 3842 dbSNP
rs902337338 3846 dbSNP
rs1296068714 3848 dbSNP
rs1418868652 3853 dbSNP
rs1395524744 3862 dbSNP
rs1254990049 3871 dbSNP
rs1480765047 3874 dbSNP
rs1178136854 3875 dbSNP
rs1431410974 3877 dbSNP
rs1043594698 3878 dbSNP
rs946426919 3881 dbSNP
rs937021358 3882 dbSNP
rs1488717199 3884 dbSNP
rs889548307 3885 dbSNP
rs1214829590 3897 dbSNP
rs575528447 3899 dbSNP
rs555734210 3904 dbSNP
rs190355051 3905 dbSNP
rs1369081192 3915 dbSNP
rs1409671172 3916 dbSNP
rs913073023 3920 dbSNP
rs751276462 3921 dbSNP
rs1311002512 3926 dbSNP
rs976610019 3927 dbSNP
rs922300079 3935 dbSNP
rs1216919422 3946 dbSNP
rs1300024670 3947 dbSNP
rs1307626372 3970 dbSNP
rs151066771 3971 dbSNP
rs376974121 3974 dbSNP
rs372996038 3975 dbSNP
rs1248339871 3976 dbSNP
rs5801215 3976 dbSNP
rs940959723 3983 dbSNP
rs1190589300 3984 dbSNP
rs1341911759 3991 dbSNP
rs574025908 3992 dbSNP
rs1170710714 3995 dbSNP
rs1388554690 4003 dbSNP
rs757936524 4005 dbSNP
rs1275902311 4009 dbSNP
rs553832634 4011 dbSNP
rs867339722 4015 dbSNP
rs1352080195 4016 dbSNP
rs1434897952 4024 dbSNP
rs749978695 4025 dbSNP
rs1293521445 4026 dbSNP
rs1399089324 4028 dbSNP
rs1375807403 4032 dbSNP
rs534308255 4036 dbSNP
rs1294877208 4038 dbSNP
rs533173345 4039 dbSNP
rs185640525 4060 dbSNP
rs764582477 4087 dbSNP
rs1175368787 4088 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

miRNA-target interactions (Provided by authors)
IDDuplex structurePosition
1 
miRNA  3' guuugugguaacaguGUGAGGu 5'
                         |||||| 
Target 5' -----------uauuCACUCCa 3'
 		1 - 11
Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462574
Method / RBP PAR-CLIP / AGO2
Cell line / Condition TZM-bl / TZM-bl ami BaL
Location of target site ENST00000427718.2 | 3UTR | UAUUCACUCCAUUCCCCUGUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28544 Breast cancer 0.831 2.5e-7 0.840 1.4e-7 24 Click to see details
GSE32688 Pancreatic cancer 0.466 3.6e-3 0.164 1.8e-1 32 Click to see details
GSE17306 Multiple myeloma -0.202 8.2e-2 -0.120 2.1e-1 49 Click to see details
GSE19350 CNS germ cell tumors -0.362 1.2e-1 -0.105 3.7e-1 12 Click to see details
GSE21687 Ependynoma primary tumors -0.116 1.8e-1 -0.121 1.7e-1 64 Click to see details
GSE26953 Aortic valvular endothelial cells 0.181 2.0e-1 0.215 1.6e-1 24 Click to see details
GSE42095 Differentiated embryonic stem cells -0.146 2.5e-1 0.149 2.5e-1 23 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.149 2.7e-1 -0.041 4.3e-1 20 Click to see details
GSE17498 Multiple myeloma -0.098 2.7e-1 -0.190 1.2e-1 40 Click to see details
GSE28260 Renal cortex and medulla -0.152 3.1e-1 0.044 4.4e-1 13 Click to see details
GSE27834 Pluripotent stem cells 0.128 3.2e-1 -0.082 3.8e-1 16 Click to see details
GSE21849 B cell lymphoma 0.075 3.5e-1 0.048 4.0e-1 29 Click to see details
GSE14794 Lymphoblastoid cells -0.036 3.7e-1 0.012 4.6e-1 90 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.06 3.9e-1 0.122 2.8e-1 25 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.104 4.2e-1 0.029 4.8e-1 6 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.041 4.2e-1 0.141 2.5e-1 25 Click to see details
GSE38226 Liver fibrosis 0.044 4.2e-1 -0.019 4.7e-1 21 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
ESCA -0.699 0.09 -0.700 0.09 5 Click to see details
THCA -0.662 0.11 -0.300 0.31 5 Click to see details
LIHC -0.166 0.13 -0.211 0.07 49 Click to see details
HNSC 0.894 0.15 1.000 0.5 3 Click to see details
KIRP -0.186 0.32 0.233 0.27 9 Click to see details
KIRC 0.083 0.33 0.140 0.23 29 Click to see details
KICH 0.162 0.35 0.238 0.29 8 Click to see details
STAD 0.111 0.4 0.119 0.39 8 Click to see details
CHOL -0.099 0.4 -0.133 0.37 9 Click to see details
CHOL -0.099 0.4 -0.133 0.37 9 Click to see details
CHOL -0.099 0.4 -0.133 0.37 9 Click to see details
CHOL -0.099 0.4 -0.133 0.37 9 Click to see details
CHOL -0.099 0.4 -0.133 0.37 9 Click to see details
CHOL -0.099 0.4 -0.133 0.37 9 Click to see details
MiRNA Regulatory Network:
Functional analysis:
Strong evidence (reporter assay, western blot, qRT-PCR or qPCR) Other evidence
Transcription factor regulation Circular RNA sponge
539 hsa-miR-122-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000012 CYP7A1 cytochrome P450 family 7 subfamily A member 1 3 1
MIRT000364 IGF1R insulin like growth factor 1 receptor 4 3
MIRT000365 SRF serum response factor 4 1
MIRT000663 RAC1 Rac family small GTPase 1 5 2
MIRT000717 RHOA ras homolog family member A 2 2
MIRT003006 CCNG1 cyclin G1 4 4
MIRT003079 GTF2B general transcription factor IIB 2 1
MIRT003080 GYS1 glycogen synthase 1 4 2
MIRT003081 ANK2 ankyrin 2 3 1
MIRT003082 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 3 1
MIRT003083 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 4 2
MIRT003084 ANXA11 annexin A11 4 2
MIRT003085 ALDOA aldolase, fructose-bisphosphate A 3 2
MIRT003086 RAB6B RAB6B, member RAS oncogene family 3 1
MIRT003087 RAB11FIP1 RAB11 family interacting protein 1 5 3
MIRT003088 FOXP1 forkhead box P1 3 1
MIRT003089 MECP2 methyl-CpG binding protein 2 3 2
MIRT003090 NCAM1 neural cell adhesion molecule 1 4 3
MIRT003091 UBAP2 ubiquitin associated protein 2 3 1
MIRT003092 TBX19 T-box 19 3 1
MIRT003093 AACS acetoacetyl-CoA synthetase 3 1
MIRT003094 DUSP2 dual specificity phosphatase 2 3 1
MIRT003095 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 3 1
MIRT003097 MAPK11 mitogen-activated protein kinase 11 3 1
MIRT003098 FUNDC2 FUN14 domain containing 2 3 1
MIRT003099 AKT3 AKT serine/threonine kinase 3 3 3
MIRT003100 TPD52L2 tumor protein D52 like 2 4 3
MIRT003102 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 4 2
MIRT003103 G6PC3 glucose-6-phosphatase catalytic subunit 3 4 2
MIRT003104 AP3M2 adaptor related protein complex 3 mu 2 subunit 3 1
MIRT003105 SLC7A1 solute carrier family 7 member 1 4 4
MIRT003106 XPO6 exportin 6 3 1
MIRT003107 FOXJ3 forkhead box J3 3 1
MIRT003108 SLC7A11 solute carrier family 7 member 11 3 1
MIRT003109 TRIB1 tribbles pseudokinase 1 3 1
MIRT003110 EGLN3 egl-9 family hypoxia inducible factor 3 3 1
MIRT003111 NUMBL NUMB like, endocytic adaptor protein 3 1
MIRT003112 ADAM17 ADAM metallopeptidase domain 17 3 5
MIRT003727 DSTYK dual serine/threonine and tyrosine protein kinase 3 2
MIRT003728 FAM117B family with sequence similarity 117 member B 3 1
MIRT004364 BCL2L2 BCL2 like 2 4 2
MIRT004527 PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 2 1
MIRT004879 ADAM10 ADAM metallopeptidase domain 10 5 1
MIRT005782 ACVR1C activin A receptor type 1C 1 1
MIRT006123 PRKRA protein activator of interferon induced protein kinase EIF2AK2 4 1
MIRT006421 WNT1 Wnt family member 1 3 1
MIRT007007 PTPN1 protein tyrosine phosphatase, non-receptor type 1 1 1
MIRT007081 NT5C3A 5'-nucleotidase, cytosolic IIIA 1 1
MIRT007082 P4HA1 prolyl 4-hydroxylase subunit alpha 1 1 1
MIRT007083 ZNF395 zinc finger protein 395 1 1
MIRT007084 SOCS1 suppressor of cytokine signaling 1 1 1
MIRT023217 SSR3 signal sequence receptor subunit 3 1 1
MIRT023218 PHOX2A paired like homeobox 2a 1 1
MIRT023219 DZIP1L DAZ interacting zinc finger protein 1 like 1 1
MIRT023220 GSTM2 glutathione S-transferase mu 2 1 1
MIRT023221 RAI14 retinoic acid induced 14 1 1
MIRT023222 STARD13 StAR related lipid transfer domain containing 13 1 1
MIRT023223 CNN3 calponin 3 1 1
MIRT023224 A2M alpha-2-macroglobulin 1 1
MIRT023225 EFCAB6 EF-hand calcium binding domain 6 1 1
MIRT023226 GLOD4 glyoxalase domain containing 4 1 1
MIRT023227 CALR calreticulin 1 1
MIRT023228 POFUT1 protein O-fucosyltransferase 1 1 1
MIRT023229 PYGO1 pygopus family PHD finger 1 1 1
MIRT023230 CDY2B chromodomain Y-linked 2B 1 1
MIRT023231 CDC42EP3 CDC42 effector protein 3 1 1
MIRT023232 CS citrate synthase 3 3
MIRT023233 RNF170 ring finger protein 170 3 3
MIRT023234 GTF3C6 general transcription factor IIIC subunit 6 1 1
MIRT023235 ZNF321P zinc finger protein 321, pseudogene 1 1
MIRT023236 LAMP1 lysosomal associated membrane protein 1 1 1
MIRT023237 SLC52A2 solute carrier family 52 member 2 1 1
MIRT023238 ZNF658 zinc finger protein 658 1 1
MIRT023239 ATP13A3 ATPase 13A3 1 1
MIRT023240 CPNE5 copine 5 1 1
MIRT023241 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT023242 TMEM136 transmembrane protein 136 1 1
MIRT023243 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT023244 TMEM74 transmembrane protein 74 1 1
MIRT023245 ANKRD10 ankyrin repeat domain 10 1 1
MIRT023246 TBL1XR1 transducin beta like 1 X-linked receptor 1 1 1
MIRT023247 USP10 ubiquitin specific peptidase 10 1 1
MIRT023248 AKAP11 A-kinase anchoring protein 11 1 1
MIRT023249 BACH2 BTB domain and CNC homolog 2 1 1
MIRT023250 HCCS holocytochrome c synthase 1 1
MIRT023251 Slc7a1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 1 1
MIRT023252 GTDC2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1 1
MIRT023253 CTPS1 CTP synthase 1 1 1
MIRT023254 SLC44A1 solute carrier family 44 member 1 1 1
MIRT023255 CLSPN claspin 1 1
MIRT023256 RABGEF1 RAB guanine nucleotide exchange factor 1 1 1
MIRT023257 FBXO7 F-box protein 7 1 1
MIRT023258 NCDN neurochondrin 1 1
MIRT023259 SOX2 SRY-box 2 1 1
MIRT023260 ZNF618 zinc finger protein 618 1 1
MIRT023261 ABLIM1 actin binding LIM protein 1 1 1
MIRT023262 ZBTB4 zinc finger and BTB domain containing 4 1 1
MIRT023263 LUZP1 leucine zipper protein 1 1 1
MIRT023264 NLGN3 neuroligin 3 1 1
MIRT023265 PRR11 proline rich 11 1 1
MIRT023266 HHAT hedgehog acyltransferase 1 1
MIRT023267 UBE2L3 ubiquitin conjugating enzyme E2 L3 1 1
MIRT023268 DNAJC18 DnaJ heat shock protein family (Hsp40) member C18 1 1
MIRT023269 FAM102A family with sequence similarity 102 member A 1 1
MIRT023270 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 1
MIRT023271 DENND2C DENN domain containing 2C 1 1
MIRT023272 HMOX1 heme oxygenase 1 3 2
MIRT023273 USP28 ubiquitin specific peptidase 28 1 1
MIRT023274 KRT18 keratin 18 1 1
MIRT023275 BPGM bisphosphoglycerate mutase 1 1
MIRT023276 ZNF233 zinc finger protein 233 1 1
MIRT023277 SLC25A30 solute carrier family 25 member 30 1 1
MIRT023278 ANKRD9 ankyrin repeat domain 9 3 3
MIRT023279 RLN1 relaxin 1 1 1
MIRT023280 DDIT3 DNA damage inducible transcript 3 1 1
MIRT023281 TRIM65 tripartite motif containing 65 1 1
MIRT023282 B4GALT1 beta-1,4-galactosyltransferase 1 1 1
MIRT023283 ANXA7 annexin A7 1 1
MIRT023284 SLC19A2 solute carrier family 19 member 2 1 1
MIRT023285 MARCKS myristoylated alanine rich protein kinase C substrate 1 1
MIRT023286 CLEC11A C-type lectin domain containing 11A 1 1
MIRT023287 CENPF centromere protein F 1 1
MIRT023288 CLDN18 claudin 18 1 1
MIRT023289 PFDN1 prefoldin subunit 1 1 1
MIRT023290 SPAG9 sperm associated antigen 9 1 1
MIRT023291 CEACAM8 carcinoembryonic antigen related cell adhesion molecule 8 1 1
MIRT023292 KRT10 keratin 10 1 1
MIRT023293 SET SET nuclear proto-oncogene 1 1
MIRT023294 SLC11A2 solute carrier family 11 member 2 1 1
MIRT023295 MYCBP MYC binding protein 3 3
MIRT023296 GPHB5 glycoprotein hormone beta 5 1 1
MIRT023297 STAU2 staufen double-stranded RNA binding protein 2 1 1
MIRT023298 NFATC1 nuclear factor of activated T-cells 1 1 1
MIRT023299 ERP29 endoplasmic reticulum protein 29 1 1
MIRT023300 MEP1A meprin A subunit alpha 1 1
MIRT023301 SPTLC1 serine palmitoyltransferase long chain base subunit 1 1 1
MIRT023302 GTF2H2 general transcription factor IIH subunit 2 1 1
MIRT023303 C14orf39 chromosome 14 open reading frame 39 1 1
MIRT023304 UBE2K ubiquitin conjugating enzyme E2 K 1 1
MIRT023305 PPP1R9B protein phosphatase 1 regulatory subunit 9B 1 1
MIRT023306 PSMD10 proteasome 26S subunit, non-ATPase 10 1 1
MIRT023307 CALD1 caldesmon 1 1 1
MIRT023308 TTYH3 tweety family member 3 1 1
MIRT023309 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 1 1
MIRT023310 SCN4B sodium voltage-gated channel beta subunit 4 1 1
MIRT023311 C1orf122 chromosome 1 open reading frame 122 1 1
MIRT023312 PAK1 p21 (RAC1) activated kinase 1 1 1
MIRT023313 DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 1 1
MIRT023314 DMXL1 Dmx like 1 1 1
MIRT023315 ZNF160 zinc finger protein 160 1 1
MIRT023316 CSRP1 cysteine and glycine rich protein 1 1 1
MIRT023317 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT023318 RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit 1 1
MIRT023319 ANKRD13C ankyrin repeat domain 13C 1 1
MIRT023320 SUCLA2 succinate-CoA ligase ADP-forming beta subunit 1 1
MIRT023321 PEA15 phosphoprotein enriched in astrocytes 15 1 1
MIRT023322 MTPN myotrophin 1 1
MIRT023323 YKT6 YKT6 v-SNARE homolog 1 1
MIRT023324 MOB3B MOB kinase activator 3B 1 1
MIRT023325 FAM118A family with sequence similarity 118 member A 1 1
MIRT023326 ZNF264 zinc finger protein 264 1 1
MIRT023327 HECTD3 HECT domain E3 ubiquitin protein ligase 3 1 1
MIRT023328 BATF2 basic leucine zipper ATF-like transcription factor 2 1 1
MIRT023329 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 1 1
MIRT023330 MAPRE1 microtubule associated protein RP/EB family member 1 1 1
MIRT023331 TBC1D22B TBC1 domain family member 22B 1 1
MIRT023332 SLC9A1 solute carrier family 9 member A1 3 3
MIRT023333 NPEPPS aminopeptidase puromycin sensitive 1 1
MIRT023334 BCL2L1 BCL2 like 1 2 1
MIRT023335 OSMR oncostatin M receptor 1 1
MIRT023336 CALU calumenin 1 1
MIRT023337 BRI3BP BRI3 binding protein 1 1
MIRT023338 PSPH phosphoserine phosphatase 1 1
MIRT023339 APMAP adipocyte plasma membrane associated protein 1 1
MIRT023340 WASF1 WAS protein family member 1 1 1
MIRT023341 LCA5 LCA5, lebercilin 1 1
MIRT023342 NODAL nodal growth differentiation factor 1 1
MIRT023343 CASP7 caspase 7 1 1
MIRT023344 CPA3 carboxypeptidase A3 1 1
MIRT023345 PALM paralemmin 1 1
MIRT023346 TCP11 t-complex 11 1 1
MIRT023347 NALCN sodium leak channel, non-selective 1 1
MIRT023348 PLAGL2 PLAG1 like zinc finger 2 1 1
MIRT023349 IDS iduronate 2-sulfatase 3 3
MIRT023350 PARP11 poly(ADP-ribose) polymerase family member 11 1 1
MIRT023351 MAZ MYC associated zinc finger protein 1 1
MIRT023352 CPNE4 copine 4 1 1
MIRT023353 FAM19A3 family with sequence similarity 19 member A3, C-C motif chemokine like 1 1
MIRT023354 KRT14 keratin 14 1 1
MIRT023355 DYNC1H1 dynein cytoplasmic 1 heavy chain 1 1 1
MIRT023356 GNL3L G protein nucleolar 3 like 1 1
MIRT023357 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 1 1
MIRT023358 EYA4 EYA transcriptional coactivator and phosphatase 4 1 1
MIRT023359 GNPDA2 glucosamine-6-phosphate deaminase 2 1 1
MIRT023360 BRCA2 BRCA2, DNA repair associated 1 1
MIRT023361 ZSCAN4 zinc finger and SCAN domain containing 4 1 1
MIRT023362 HSPA5 heat shock protein family A (Hsp70) member 5 1 1
MIRT023363 SERAC1 serine active site containing 1 1 1
MIRT023364 SLC15A2 solute carrier family 15 member 2 1 1
MIRT023365 RABIF RAB interacting factor 1 1
MIRT023366 ART3 ADP-ribosyltransferase 3 1 1
MIRT023367 EP400 E1A binding protein p400 1 1
MIRT023368 MT4 metallothionein 4 1 1
MIRT023369 TRAM2 translocation associated membrane protein 2 1 1
MIRT023370 PHPT1 phosphohistidine phosphatase 1 1 1
MIRT023371 KIAA0101 PCNA clamp associated factor 1 1
MIRT023372 VHL von Hippel-Lindau tumor suppressor 1 1
MIRT023373 IFNA1 interferon alpha 1 1 1
MIRT023374 FSTL3 follistatin like 3 1 1
MIRT023375 PHF14 PHD finger protein 14 1 1
MIRT023376 ZCCHC2 zinc finger CCHC-type containing 2 1 1
MIRT023377 GSTM3 glutathione S-transferase mu 3 1 1
MIRT023378 DCTN5 dynactin subunit 5 1 1
MIRT023379 CHST3 carbohydrate sulfotransferase 3 1 1
MIRT023380 HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 1 1
MIRT023381 ADO 2-aminoethanethiol dioxygenase 1 1
MIRT023382 POMZP3 POM121 and ZP3 fusion 1 1
MIRT023383 CHST12 carbohydrate sulfotransferase 12 1 1
MIRT023384 ARSB arylsulfatase B 1 1
MIRT023385 ATP7A ATPase copper transporting alpha 1 1
MIRT023386 PMP22 peripheral myelin protein 22 1 1
MIRT023387 TGFBRAP1 transforming growth factor beta receptor associated protein 1 1 1
MIRT023388 ORC2 origin recognition complex subunit 2 1 1
MIRT023389 CREB1 cAMP responsive element binding protein 1 1 1
MIRT023390 CD83 CD83 molecule 1 1
MIRT023391 TOB2 transducer of ERBB2, 2 3 5
MIRT023392 LRP11 LDL receptor related protein 11 1 1
MIRT023393 MPV17 MPV17, mitochondrial inner membrane protein 1 1
MIRT023394 TRIM29 tripartite motif containing 29 1 1
MIRT023395 OSBP2 oxysterol binding protein 2 1 1
MIRT023396 PKM pyruvate kinase, muscle 6 4
MIRT023397 FOXK2 forkhead box K2 3 3
MIRT023398 CLIC4 chloride intracellular channel 4 5 6
MIRT023399 ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 1 1
MIRT023400 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 1 1
MIRT023401 LMNB2 lamin B2 3 5
MIRT023402 BAX BCL2 associated X, apoptosis regulator 2 2
MIRT023403 CDK4 cyclin dependent kinase 4 3 3
MIRT054362 Cux1 cut-like homeobox 1 1 1
MIRT074336 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT109185 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT324745 ACER2 alkaline ceramidase 2 2 2
MIRT325564 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT438005 MEF2D myocyte enhancer factor 2D 1 2
MIRT438206 TGFB1 transforming growth factor beta 1 1 1
MIRT438639 AXL AXL receptor tyrosine kinase 1 1
MIRT438655 NOD2 nucleotide binding oligomerization domain containing 2 3 1
MIRT438734 FUT8 fucosyltransferase 8 3 1
MIRT449879 CYP3A5 cytochrome P450 family 3 subfamily A member 5 2 2
MIRT451716 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT453274 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT454113 MRPL52 mitochondrial ribosomal protein L52 2 2
MIRT454232 OSBPL10 oxysterol binding protein like 10 2 15
MIRT454344 CDKL1 cyclin dependent kinase like 1 2 2
MIRT455826 ZSWIM1 zinc finger SWIM-type containing 1 2 3
MIRT459903 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 12
MIRT461654 G6PC glucose-6-phosphatase catalytic subunit 2 2
MIRT461934 TNFSF14 TNF superfamily member 14 2 2
MIRT463834 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT468615 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT469456 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT469637 RAD21 RAD21 cohesin complex component 2 6
MIRT473432 MDM4 MDM4, p53 regulator 2 2
MIRT473872 MAFK MAF bZIP transcription factor K 2 6
MIRT476861 FHL2 four and a half LIM domains 2 2 4
MIRT476893 FBXO21 F-box protein 21 2 2
MIRT479880 CCDC43 coiled-coil domain containing 43 2 2
MIRT488848 UBTF upstream binding transcription factor, RNA polymerase I 2 2
MIRT491164 LRP3 LDL receptor related protein 3 2 2
MIRT497662 PRMT3 protein arginine methyltransferase 3 2 2
MIRT499314 ZNF485 zinc finger protein 485 2 10
MIRT499759 CIRH1A UTP4, small subunit processome component 2 10
MIRT500014 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501090 SLC7A5 solute carrier family 7 member 5 2 4
MIRT509646 ZNF354B zinc finger protein 354B 2 10
MIRT509945 TOMM70A translocase of outer mitochondrial membrane 70 2 6
MIRT510320 SLC2A3 solute carrier family 2 member 3 2 4
MIRT515505 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT516410 COPA coatomer protein complex subunit alpha 2 2
MIRT517861 NCAPD2 non-SMC condensin I complex subunit D2 2 4
MIRT522558 MCAM melanoma cell adhesion molecule 2 4
MIRT523525 GLUL glutamate-ammonia ligase 2 2
MIRT523764 FBXO27 F-box protein 27 2 4
MIRT524517 CDK19 cyclin dependent kinase 19 2 2
MIRT524753 BIRC5 baculoviral IAP repeat containing 5 2 6
MIRT529366 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 2 4
MIRT531189 SIGLEC12 sialic acid binding Ig like lectin 12 (gene/pseudogene) 2 2
MIRT531639 C19orf52 translocase of inner mitochondrial membrane 29 2 4
MIRT531913 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT532678 PATZ1 POZ/BTB and AT hook containing zinc finger 1 2 2
MIRT533115 YIPF4 Yip1 domain family member 4 2 4
MIRT534740 RBM47 RNA binding motif protein 47 2 2
MIRT535471 PARVB parvin beta 2 4
MIRT536742 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT537237 GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 2 2
MIRT539523 ABCF1 ATP binding cassette subfamily F member 1 2 4
MIRT540438 RBM43 RNA binding motif protein 43 2 2
MIRT542982 ERC1 ELKS/RAB6-interacting/CAST family member 1 2 2
MIRT544674 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT549514 HDDC2 HD domain containing 2 2 2
MIRT549663 ORC6 origin recognition complex subunit 6 2 4
MIRT555420 PPIC peptidylprolyl isomerase C 2 2
MIRT564701 ZNF322P1 zinc finger protein 322 pseudogene 1 2 2
MIRT570046 PKNOX1 PBX/knotted 1 homeobox 1 2 2
MIRT570257 PRSS16 protease, serine 16 2 2
MIRT571143 HM13 histocompatibility minor 13 2 2
MIRT575202 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575282 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 2 2
MIRT575302 Osbpl10 oxysterol binding protein-like 10 2 9
MIRT575323 Fbxo6 F-box protein 6 2 2
MIRT575377 Ang angiogenin, ribonuclease, RNase A family, 5 2 3
MIRT575614 Zswim1 zinc finger SWIM-type containing 1 2 3
MIRT575671 Map1b microtubule-associated protein 1B 2 2
MIRT607065 POM121L7 POM121 transmembrane nucleoporin like 7 pseudogene 2 2
MIRT607490 HEBP2 heme binding protein 2 2 2
MIRT607522 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT607655 BTN3A2 butyrophilin subfamily 3 member A2 2 2
MIRT607795 RHBDL2 rhomboid like 2 2 2
MIRT607842 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT607927 ANG angiogenin 2 3
MIRT607966 SNX22 sorting nexin 22 2 2
MIRT608074 ZFP14 ZFP14 zinc finger protein 2 2
MIRT608141 SYAP1 synapse associated protein 1 2 2
MIRT612620 RABL3 RAB, member of RAS oncogene family like 3 2 2
MIRT617444 CCS copper chaperone for superoxide dismutase 2 2
MIRT617552 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT618772 HLA-E major histocompatibility complex, class I, E 2 2
MIRT618926 MEAF6 MYST/Esa1 associated factor 6 2 2
MIRT619247 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT620091 YME1L1 YME1 like 1 ATPase 2 2
MIRT620483 XKR6 XK related 6 2 2
MIRT620570 WBSCR27 methyltransferase like 27 2 4
MIRT622977 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT623169 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT624165 DGKE diacylglycerol kinase epsilon 2 2
MIRT625268 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT625396 AKR7L aldo-keto reductase family 7 like (gene/pseudogene) 2 2
MIRT625694 OPTN optineurin 2 2
MIRT626093 MKLN1 muskelin 1 2 2
MIRT626431 CHDH choline dehydrogenase 2 2
MIRT627013 FIG4 FIG4 phosphoinositide 5-phosphatase 2 2
MIRT627077 SF3A1 splicing factor 3a subunit 1 2 2
MIRT627140 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT627347 TSHZ2 teashirt zinc finger homeobox 2 2 2
MIRT627420 THAP2 THAP domain containing 2 2 2
MIRT627441 TAS2R5 taste 2 receptor member 5 2 2
MIRT628078 KAT7 lysine acetyltransferase 7 2 4
MIRT628276 CYB5D1 cytochrome b5 domain containing 1 2 2
MIRT629094 F2RL1 F2R like trypsin receptor 1 2 2
MIRT629236 CINP cyclin dependent kinase 2 interacting protein 2 2
MIRT629286 UNC13A unc-13 homolog A 2 2
MIRT629407 ADM2 adrenomedullin 2 2 2
MIRT629584 RFC2 replication factor C subunit 2 2 2
MIRT629635 WDR31 WD repeat domain 31 2 2
MIRT629874 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT629984 NARS asparaginyl-tRNA synthetase 2 2
MIRT630043 TERF2 telomeric repeat binding factor 2 2 2
MIRT630061 NIP7 NIP7, nucleolar pre-rRNA processing protein 2 2
MIRT630127 ARHGEF5 Rho guanine nucleotide exchange factor 5 2 2
MIRT630155 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT630252 SMTNL2 smoothelin like 2 2 2
MIRT630278 PSMB5 proteasome subunit beta 5 2 2
MIRT630347 NKAP NFKB activating protein 2 2
MIRT630497 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT631264 CENPM centromere protein M 2 2
MIRT631403 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT632470 RPS15A ribosomal protein S15a 2 2
MIRT632596 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT632994 DUSP18 dual specificity phosphatase 18 2 2
MIRT633082 CXorf21 chromosome X open reading frame 21 2 2
MIRT633239 ZNF573 zinc finger protein 573 2 2
MIRT633286 SLC1A5 solute carrier family 1 member 5 2 2
MIRT633536 PGBD5 piggyBac transposable element derived 5 2 2
MIRT634338 SGOL1 shugoshin 1 2 2
MIRT634600 KIAA1919 major facilitator superfamily domain containing 4B 2 2
MIRT635050 MYH11 myosin heavy chain 11 2 2
MIRT635236 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT635322 BMS1 BMS1, ribosome biogenesis factor 2 2
MIRT636268 RNF157 ring finger protein 157 2 2
MIRT636450 LRCH3 leucine rich repeats and calponin homology domain containing 3 2 2
MIRT636516 FMN1 formin 1 2 2
MIRT636755 SLC16A5 solute carrier family 16 member 5 2 2
MIRT637134 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT637188 ROMO1 reactive oxygen species modulator 1 2 2
MIRT637287 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT637532 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT637693 CEP89 centrosomal protein 89 2 2
MIRT637788 OLA1 Obg like ATPase 1 2 2
MIRT637925 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT638449 PLXDC2 plexin domain containing 2 2 2
MIRT640871 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT642643 PTGR2 prostaglandin reductase 2 2 2
MIRT643082 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT643123 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT644236 SLC35E3 solute carrier family 35 member E3 2 2
MIRT644665 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT645092 SLC35E2B solute carrier family 35 member E2B 2 2
MIRT645993 ACP6 acid phosphatase 6, lysophosphatidic 2 2
MIRT646508 FAM217B family with sequence similarity 217 member B 2 2
MIRT647013 ADCY2 adenylate cyclase 2 2 2
MIRT647095 SEC23B Sec23 homolog B, coat complex II component 2 2
MIRT647714 NFX1 nuclear transcription factor, X-box binding 1 2 4
MIRT648040 FADS6 fatty acid desaturase 6 2 2
MIRT648510 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT648865 ABCA6 ATP binding cassette subfamily A member 6 2 2
MIRT649182 DNPEP aspartyl aminopeptidase 2 2
MIRT649660 TEP1 telomerase associated protein 1 2 2
MIRT651465 XIAP X-linked inhibitor of apoptosis 2 2
MIRT652398 TMEM40 transmembrane protein 40 2 2
MIRT653691 SLC25A33 solute carrier family 25 member 33 2 2
MIRT654122 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT654577 PXMP4 peroxisomal membrane protein 4 2 2
MIRT656470 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT658905 DPY19L4 dpy-19 like 4 2 2
MIRT660878 ADRBK2 G protein-coupled receptor kinase 3 2 4
MIRT661101 SPIB Spi-B transcription factor 2 2
MIRT661238 ARL17B ADP ribosylation factor like GTPase 17B 2 2
MIRT661291 LIN52 lin-52 DREAM MuvB core complex component 2 2
MIRT662235 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662544 MTAP methylthioadenosine phosphorylase 2 2
MIRT662736 LRRC3C leucine rich repeat containing 3C 2 2
MIRT662844 OMD osteomodulin 2 2
MIRT662907 MED18 mediator complex subunit 18 2 2
MIRT662956 JPH2 junctophilin 2 2 2
MIRT663340 ZNF74 zinc finger protein 74 2 2
MIRT663496 IYD iodotyrosine deiodinase 2 2
MIRT663523 MASTL microtubule associated serine/threonine kinase like 2 2
MIRT663542 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663903 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT663973 ZNF786 zinc finger protein 786 2 2
MIRT664350 C16orf45 chromosome 16 open reading frame 45 2 2
MIRT664417 TIGD6 tigger transposable element derived 6 2 2
MIRT664468 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT664957 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT664970 TDRD1 tudor domain containing 1 2 2
MIRT665199 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 2 2
MIRT665359 XKR4 XK related 4 2 2
MIRT665454 WDR17 WD repeat domain 17 2 2
MIRT665486 VPS53 VPS53, GARP complex subunit 2 2
MIRT666078 SSTR2 somatostatin receptor 2 2 2
MIRT666258 SLC31A1 solute carrier family 31 member 1 2 2
MIRT666324 SLC16A10 solute carrier family 16 member 10 2 2
MIRT666486 SBNO1 strawberry notch homolog 1 2 2
MIRT666696 RBM23 RNA binding motif protein 23 2 2
MIRT666712 RBL1 RB transcriptional corepressor like 1 2 2
MIRT666762 RAB10 RAB10, member RAS oncogene family 2 2
MIRT666931 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT667226 NFE2L1 nuclear factor, erythroid 2 like 1 2 2
MIRT667359 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT667474 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT667558 LRAT lecithin retinol acyltransferase 2 2
MIRT667748 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT668088 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT668119 GK5 glycerol kinase 5 (putative) 2 2
MIRT668166 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT668346 STXBP2 syntaxin binding protein 2 2 2
MIRT668509 ESYT2 extended synaptotagmin 2 2 2
MIRT669291 C17orf85 nuclear cap binding subunit 3 2 2
MIRT669547 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT669778 CNDP1 carnosine dipeptidase 1 2 2
MIRT669858 BROX BRO1 domain and CAAX motif containing 2 4
MIRT670017 TECPR1 tectonin beta-propeller repeat containing 1 2 2
MIRT670177 CCDC142 coiled-coil domain containing 142 2 2
MIRT671107 ZNF841 zinc finger protein 841 2 2
MIRT671351 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 2
MIRT671476 FLYWCH2 FLYWCH family member 2 2 2
MIRT671492 SLC38A9 solute carrier family 38 member 9 2 2
MIRT671554 LIMS1 LIM zinc finger domain containing 1 2 2
MIRT671925 PLEKHS1 pleckstrin homology domain containing S1 2 4
MIRT672196 F2 coagulation factor II, thrombin 2 2
MIRT672217 DCAF7 DDB1 and CUL4 associated factor 7 2 2
MIRT672252 SIK2 salt inducible kinase 2 2 2
MIRT672290 GP2 glycoprotein 2 2 2
MIRT672430 POLR2D RNA polymerase II subunit D 2 2
MIRT672597 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT672901 KRBA2 KRAB-A domain containing 2 2 2
MIRT672958 ZNF655 zinc finger protein 655 2 2
MIRT673096 SYNPO2L synaptopodin 2 like 2 2
MIRT673171 TMEM56 transmembrane protein 56 2 2
MIRT673251 INO80 INO80 complex subunit 2 2
MIRT673296 RNF19B ring finger protein 19B 2 2
MIRT673574 KDELC2 KDEL motif containing 2 2 2
MIRT673586 KIF1C kinesin family member 1C 2 2
MIRT673737 TCF23 transcription factor 23 2 2
MIRT673767 MRPL17 mitochondrial ribosomal protein L17 2 2
MIRT674215 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT674283 NAGK N-acetylglucosamine kinase 2 2
MIRT674338 KCMF1 potassium channel modulatory factor 1 2 2
MIRT674517 PRR23A proline rich 23A 2 2
MIRT675100 SNTB2 syntrophin beta 2 2 2
MIRT675144 MOGAT1 monoacylglycerol O-acyltransferase 1 2 4
MIRT675223 CLK4 CDC like kinase 4 2 2
MIRT675263 ZNF431 zinc finger protein 431 2 2
MIRT675577 WWC1 WW and C2 domain containing 1 2 2
MIRT676025 C9orf69 transmembrane protein 250 2 2
MIRT676430 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT676560 VSIG1 V-set and immunoglobulin domain containing 1 2 2
MIRT676596 ARIH2OS ariadne RBR E3 ubiquitin protein ligase 2 opposite strand 2 2
MIRT678576 TMEM168 transmembrane protein 168 2 2
MIRT678756 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT680344 ZNF281 zinc finger protein 281 2 2
MIRT680467 C3 complement C3 2 2
MIRT682826 FLG2 filaggrin family member 2 2 2
MIRT682881 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT684404 TMEM180 major facilitator superfamily domain containing 13A 2 2
MIRT685275 KIAA1143 KIAA1143 2 2
MIRT686061 KCNA7 potassium voltage-gated channel subfamily A member 7 2 2
MIRT687526 NASP nuclear autoantigenic sperm protein 2 2
MIRT691760 BCL2L15 BCL2 like 15 2 2
MIRT693890 C3orf62 chromosome 3 open reading frame 62 2 2
MIRT699342 SLC35E1 solute carrier family 35 member E1 2 2
MIRT699909 RUNDC1 RUN domain containing 1 2 2
MIRT700536 PTPDC1 protein tyrosine phosphatase domain containing 1 2 2
MIRT701807 MRPS25 mitochondrial ribosomal protein S25 2 2
MIRT702174 LYRM4 LYR motif containing 4 2 2
MIRT706205 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT706659 RNF216 ring finger protein 216 2 2
MIRT706682 COL13A1 collagen type XIII alpha 1 chain 2 2
MIRT706705 GPR155 G protein-coupled receptor 155 2 2
MIRT706777 ANKRD36 ankyrin repeat domain 36 2 2
MIRT706844 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT706863 MAFF MAF bZIP transcription factor F 2 2
MIRT706896 ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 2 2
MIRT706916 THAP6 THAP domain containing 6 2 2
MIRT706962 FANCC Fanconi anemia complementation group C 2 2
MIRT706980 XPO5 exportin 5 2 2
MIRT707015 RRP36 ribosomal RNA processing 36 2