miRTarBase - #MIRT543801 -
pre-miRNA Information
pre-miRNA hsa-mir-15a   
Genomic Coordinates chr13: 50049119 - 50049201
Synonyms MIRN15A, hsa-mir-15a, miRNA15A, MIR15A
Description Homo sapiens miR-15a stem-loop
Comment Reference .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-15a-5p
Sequence 14| UAGCAGCACAUAAUGGUUUGUG |35
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1355089203 8 dbSNP
rs753467375 11 dbSNP
rs923737993 12 dbSNP
rs766120172 20 dbSNP
rs1359939022 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles

Circulating MicroRNA Expression Profiling
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RALGAPB   
Synonyms KIAA1219, RalGAPbeta
Description Ral GTPase activating protein non-catalytic beta subunit
Transcript NM_020336   
Expression
Putative miRNA Targets on RALGAPB
3'UTR of RALGAPB
(miRNA target sites are highlighted)
>RALGAPB|NM_020336|3'UTR
   1 ACCACTGAATTTCTAAGACTGTTGAACTCCAGTTTGGGAACTATAACACAGCAGAACAGTTTGATAGGTGATCACTGTAA
  81 AAATAAAAACAAATCACTCCCAAGAGCTTACTGTTTAATCACCAGAATAGAAGAAACACATTATAACCCATTTGATAGAA
 161 GACTTTGGGCTATCTAGTGAAATGGGCTCCCAGACACAATCATACTCCTGCTGATAATGATGATATACATTTTAGCCATA
 241 AACTTTCTTTTAAAAGTGACAATTTTAGTTAAACATAAGCCTTTTGAGGAGAAAGGCTTTTATGCATCTCAGTTAAACAC
 321 GTGCATTGGTAGTATCAACAAATTTGCAATATAGAAGTTGAAGATAGTTTTTTACCTCACTTTTTAGGAGGTTGTATTCA
 401 AAATTAAAATCTCAGAATCTTACAGGACATTTAAAGACTCATGTTGATAGCATGGAGGAGAAGGAAAGAAGTCACAGCCT
 481 TCTACTCAGTTGTAGGTCTTCTTGTCATCCAGCTGTCACACTGACAAAAAGAAAAGATGATACATGTTTTTTGCTCAGAT
 561 AAGAAGCCTGACATTAAAAGATGTCATATTTTTTTCTCCACATTTCAAAAAGTTGTCCTTCTCATCACTGCACAGATCTG
 641 TCTGAAAGCCTCAGTTTCTGAGTGACCCAGGAACAGATCAGAAATGGAGCATGGCCTTGTCCTTTAATGGGGATGCAAAT
 721 AAAGTTTGTGGGGTTAAAAGTTATAAGACAGCAGTGATACCCCACTCTCTCCATTATTGTCCAGCGGGGTGACATAATGA
 801 CAGGTTAAATATTTGTGATTCATTGATTAAATATTATTTAAAGAAATGTAAATTCACAATAAGGGTTGAAAATTATTTGG
 881 TTTCATCCATTGTCTCTTATTTCAGGACCAAGCAGCAAACTGCAGTAGTTTGTGAAGGATTCTAATATGGGGTTCAGGAA
 961 TAGCCTCTCAACGCTACTAATTCAGATCTCTCCCAGAGAACTACTGGATTTCCTCATAATTGACAAACATGAGTGACCAC
1041 CTCTTTGGGTGGCTACTGTTAGAAATGGCTGTTGTCATGTTTTCTGGACTTTGCCAGCCAACAGATCCCTGCCAGGTTTT
1121 GGAAATACTTCTATTACCTCGCTGCTACTTTTCTGCAGGGATAAAACTTTTGAGGTGGCCAGACCCAGAACATCCAAGGA
1201 TTCCTGTTACAGTGCTACAGTATACACTGCTCATTTATCCTATTCTCATGTGCTTTCTTCTTTAGTAAGATTATTTTAAG
1281 AAAATAAGTGATATTTAAAGTCCAAAGAGGAATGATCACAGTTGTATAAGGGGTGTTTTCCCACTTGAACTCTGATGTCA
1361 GTCGACTGTGGGTCAGAGCTACAACCATCTGTTTGGTTTGATGTTTTGGTGGTTTACTTACGGAGTGGGGATAGTGTGAG
1441 ACCTAATTCCCTGTGCAAATGTCTCTTATTCCAGAAATGTGCATTTTGTCATCTATAAGCAAGAAATATGGGCATAGCAG
1521 CTCTTGGTTTAAAGTTTGCCATAACCTGTTCATGTTTGTTTTAAGCTCAGGTAAAGATAACCTCCTCTTTCTATGACTCC
1601 AGTTTCCATTCAGGTTATAGTATTATTCAATAGTTGATTTTCTTTTTAAGCTGGGCAATAAATTGATGTTTCCAGATGGT
1681 AACATGGGAGAGGGCATATAGGATAAAGATGAGCAAATTCTACCCTAAAAATGTTCTAGTAGTTCACAGGAAGAAGATGA
1761 GGTTTAATAACTTTCAAGGTAATTCTAGATTGACATTTTGAGGGGAAAATGGGCTCTTGTTCTAGTTGAAGTGAGCAGAG
1841 AAGGCTATAAATTAATATGTAACTTACAGCATTCCAGAGGTTAAAAATAACTGATGCAGATGTACTTCTTCAGTGTGATT
1921 CTTCAGATCAAACTTTTACTTTTGGCATAGTTAATTTCAGAAAAATGTGCTGTATGTGTGTGTGTATGAGGGTTGGTCTT
2001 GCTGATCCTTCAGTTAGCTCTAAATTCTGGCAACTCCTTGTAATTCCAATGTATTTGATACATGAACAATCATGTTGAAT
2081 GCATTTGTGATCTGGGAGACTTCCTCGTCTTCCAGGGAAGGAAGGATGTGCAGCCCCTGAAGGCATGAAACTCCCAGTGT
2161 GTACGGAGCCAGTGGAATATGGGATACCCATACCTTACCAGGCGCTGGTTCCTTCTGCTCACAATAACATCTGCCCAAAG
2241 AGGGAGTGGGAAGAACGCTTAGCTCTTTCACTAGTATGGATTTGAGTTCATGGTCACTATTTTTACCCACCTGCCTTTGT
2321 TAAAAATCACTTTGAGTAGAATAGCACTGGAGGAACATATTTAGCACCTAATATTAATATTTAGTAGTCCATTGATAAAT
2401 TTGCCAGCATATGTTCTAGCCTCTGGGGGGAAACCAGGACCACTTTTGTCTGTGGCTTAAACAGTTCAGTTGCTATATCT
2481 GTTGGGTATGCCGGGGGTGGATGAGTGTGGCATTCCGTGAAGAGGAAGGTGGTAAGTAAGGTTTCCCTTCTACTGCCTTC
2561 TTAAGTTGCAGGAGGGAGCTTTTCTCCTCCCCTCTGGTTGGGAGCACTGAGGACAGTGAGGAGGGCTTTTACCTTGTTAA
2641 TCCTTTCCTTATTTAGCTAGCTTTCCTTTTTGTCTAGGGCTTCCTCTTGAGACCCTCTTCCATCCATTGGGCCTTTGAAA
2721 GGACTAATCAGACACACACACACACACACACACACACACACACACTCGCATACTCATGCACATTTTCCTTCATTTCCAGA
2801 TCCTTTATTTCAGAGCAGCCCATTTTCCTCTGGATTCATTGATGAATACAAGTACCCACACCTTTGGCCAGTAATGTCAG
2881 TTACCTGCTGCAGGTTCTGTGTATGAGGCCTTCATGAACGGTTACCTTCTCCATACACTAGGGAAGCATTTGTCAGACTC
2961 TGCAGACTGGGTTCTAGAGAGGCAGAGTCTTTAAGAGTATTCATTTCTTCTGGAAGGTGGAGCTTTACCCAAAGTGGAAG
3041 TTAGCCTTGCTCAAAGATGTGTTTTGTGGTAGGTGGTAAAAATAAATAAATAAATAAATAATAAAAAAAGAAACATGTAT
3121 TGGAGGTAATTTGACACTGCTGCTGGCAGTAGTTCTCTATTCACCATTTTAAAGCCCATTCAGGTTCTCTCTTCCTGAAA
3201 AGAACTGATTGCTGTGTTTACATGAAATGACATTGGAGTCAGATGGTCTGTTTTAAAGATTTCCATGACAGCCTCTTTTC
3281 CTGAGTTGGAGAGATTGGAGGTGGTCTATCCGTACGATGTGGAATCAAACGGTGGGTTTCTTAGTAGCTAAAGAAGCCAT
3361 GTACTTCTAGTGTGTTTCTCAGAATATCAACTCATGTTCTTCAGATGCTTTTCTTTTTTTAATGGTGAGGGAAAAGGTAT
3441 AATTTGGGATTCCACAGTGCCTTGCATATAGTAGGCGCCCAGTAAATACTTGTTGAAGCAAACCAAGTTTCCCAAGTCCT
3521 CATCTCTTATAGTGACCAAGACATCTTTCTCCTCTGAAGGGCTTGGCAGTTGTGGCTAAAAAATAAGCAGTATCATTATT
3601 TGCTTGAAATCATATATACAGTTTGTATGAATTTCAGTATGTTGCCAAGACATGATTTTTTCTTATTGTATTTTCTGTAA
3681 ATATTTCTGGCACTGAACTGTAAAGTAAAGGCAAAGTGTAAATATGAAGGCGTGCCCGTGCCCCTTGCCTCCTGTGTTTC
3761 ATCTTCGTCGGTTAGGGAAGAAGGTCCAGAGGTTTGTTTGTATTTATGCCGATCCTTTGTCCAGAAGAAGCCCATGGAAT
3841 ATTGAATGTAATACATTTAGTCAATTAAATTTTAAGGAGATTCTTATCTAATAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions (Predicted by miRanda)
IDDuplex structurePositionScoreMFE
1
miRNA  3' gugUUUGGUAAUAC----ACGACGAu 5'
             |::: ||| ||    ||||||| 
Target 5' tggAGGTAATT-TGACACTGCTGCTg 3'
3121 - 3145 148.00 -10.60
2
miRNA  3' guGUU-UGGU-AAUACACGACGau 5'
            :|| ::|| |||  ||||||  
Target 5' agTAATGTCAGTTACCTGCTGCag 3'
2870 - 2893 136.00 -9.10
3
miRNA  3' guguuuGGUAAUACA-CGACGAu 5'
                |:||||  | |||||| 
Target 5' atacttCTATTACCTCGCTGCTa 3'
1125 - 1147 128.00 -13.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26991471 12 COSMIC
COSN30167883 20 COSMIC
COSN26991472 27 COSMIC
COSN30102250 55 COSMIC
COSN28888611 58 COSMIC
COSN28030600 68 COSMIC
COSN31500755 69 COSMIC
COSN30193064 74 COSMIC
COSN30500827 94 COSMIC
COSN31536417 111 COSMIC
COSN31534585 211 COSMIC
COSN32168488 361 COSMIC
COSN17181965 450 COSMIC
COSN15258757 466 COSMIC
COSN30165120 488 COSMIC
COSN31543913 520 COSMIC
COSN31592744 555 COSMIC
COSN19605899 577 COSMIC
COSN31548136 581 COSMIC
COSN31661600 973 COSMIC
COSN31548984 1166 COSMIC
COSN31548139 1246 COSMIC
COSN1871156 1366 COSMIC
COSN20584838 1439 COSMIC
COSN22661199 1469 COSMIC
COSN29026628 1607 COSMIC
COSN22698583 1681 COSMIC
COSN28638030 1719 COSMIC
COSN21456717 1785 COSMIC
COSN26509249 1947 COSMIC
COSN25002564 2181 COSMIC
COSN22411196 2285 COSMIC
COSN25780874 2502 COSMIC
COSN7090776 2592 COSMIC
COSN21318617 2641 COSMIC
COSN20116438 2766 COSMIC
COSN29105888 2766 COSMIC
COSN16458556 2881 COSMIC
COSN28019165 3078 COSMIC
COSN23118584 3083 COSMIC
COSN26241233 3159 COSMIC
COSN10015272 3179 COSMIC
COSN22215051 3203 COSMIC
COSN8610919 3477 COSMIC
COSN31480534 3478 COSMIC
COSN31533439 3546 COSMIC
COSN31536423 3584 COSMIC
COSN31557416 3784 COSMIC
COSN23804217 3788 COSMIC
COSN25879241 3811 COSMIC
COSN31579048 3833 COSMIC
COSN30157921 3863 COSMIC
COSN31520906 3869 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs770730608 2 dbSNP
rs778765832 10 dbSNP
rs771958071 13 dbSNP
rs1464473302 16 dbSNP
rs1218179016 17 dbSNP
rs775559658 19 dbSNP
rs751713519 30 dbSNP
rs1465460651 33 dbSNP
rs1004515269 36 dbSNP
rs768825220 39 dbSNP
rs1015978778 40 dbSNP
rs1376236768 42 dbSNP
rs1479239494 44 dbSNP
rs776879592 48 dbSNP
rs762130495 50 dbSNP
rs1455172130 52 dbSNP
rs1160661185 61 dbSNP
rs765654219 62 dbSNP
rs1172608166 63 dbSNP
rs140477117 67 dbSNP
rs1192802991 77 dbSNP
rs1307802116 93 dbSNP
rs45603931 98 dbSNP
rs895784792 103 dbSNP
rs1010456487 106 dbSNP
rs1271990673 107 dbSNP
rs1482715641 112 dbSNP
rs562585884 113 dbSNP
rs533126137 127 dbSNP
rs1222553956 128 dbSNP
rs1228932922 151 dbSNP
rs781739089 155 dbSNP
rs1479285855 156 dbSNP
rs545192083 166 dbSNP
rs1217272293 170 dbSNP
rs560314817 173 dbSNP
rs989436499 179 dbSNP
rs746294806 191 dbSNP
rs990827 204 dbSNP
rs192310800 211 dbSNP
rs1399579374 220 dbSNP
rs922726527 221 dbSNP
rs1476763041 226 dbSNP
rs1429397547 227 dbSNP
rs951000280 238 dbSNP
rs934111540 244 dbSNP
rs1303837709 248 dbSNP
rs982715681 259 dbSNP
rs1351748326 263 dbSNP
rs1047233742 269 dbSNP
rs909786643 273 dbSNP
rs1434420453 276 dbSNP
rs1337570996 280 dbSNP
rs887348440 294 dbSNP
rs1362610363 298 dbSNP
rs567245712 303 dbSNP
rs1339037750 305 dbSNP
rs1309453369 313 dbSNP
rs138578211 318 dbSNP
rs1340980881 319 dbSNP
rs1376262256 321 dbSNP
rs780454484 322 dbSNP
rs12986 330 dbSNP
rs941618708 334 dbSNP
rs1291382352 343 dbSNP
rs1396555311 347 dbSNP
rs749648655 353 dbSNP
rs768336960 357 dbSNP
rs773969601 366 dbSNP
rs1011939824 367 dbSNP
rs745764633 368 dbSNP
rs1439914310 387 dbSNP
rs1057112837 391 dbSNP
rs1023766962 395 dbSNP
rs1291266031 410 dbSNP
rs866723727 414 dbSNP
rs906291539 415 dbSNP
rs529606432 420 dbSNP
rs7275066 423 dbSNP
rs879323312 424 dbSNP
rs1353243075 430 dbSNP
rs1307224157 438 dbSNP
rs899967757 441 dbSNP
rs1371756751 447 dbSNP
rs1324137124 448 dbSNP
rs997948631 452 dbSNP
rs1388387790 455 dbSNP
rs1449079368 475 dbSNP
rs989384277 488 dbSNP
rs569384383 495 dbSNP
rs1379275088 496 dbSNP
rs1156420742 497 dbSNP
rs951052252 500 dbSNP
rs982435910 502 dbSNP
rs1295941887 512 dbSNP
rs1198782531 513 dbSNP
rs1017303906 516 dbSNP
rs1264369151 520 dbSNP
rs1217764837 521 dbSNP
rs771439561 522 dbSNP
rs1284174364 526 dbSNP
rs1389011913 526 dbSNP
rs377689300 526 dbSNP
rs1274326702 532 dbSNP
rs1232511616 543 dbSNP
rs1322997099 546 dbSNP
rs926487453 556 dbSNP
rs939161937 559 dbSNP
rs149350177 561 dbSNP
rs1359610675 564 dbSNP
rs1295982130 569 dbSNP
rs1318288862 571 dbSNP
rs917320788 582 dbSNP
rs148093788 587 dbSNP
rs1375314641 589 dbSNP
rs546270847 589 dbSNP
rs922641221 589 dbSNP
rs760467323 599 dbSNP
rs1353854184 607 dbSNP
rs983350751 609 dbSNP
rs1284397593 610 dbSNP
rs1330427654 618 dbSNP
rs908739718 622 dbSNP
rs766419744 624 dbSNP
rs1211189866 633 dbSNP
rs941523751 636 dbSNP
rs1246743044 637 dbSNP
rs1341516271 641 dbSNP
rs1280047360 656 dbSNP
rs1053979 659 dbSNP
rs1219109144 665 dbSNP
rs900021522 668 dbSNP
rs1038608846 679 dbSNP
rs1276065300 685 dbSNP
rs1416307831 690 dbSNP
rs894735061 698 dbSNP
rs753730165 700 dbSNP
rs947669563 714 dbSNP
rs1029451640 717 dbSNP
rs759386779 720 dbSNP
rs1397937981 733 dbSNP
rs879736443 742 dbSNP
rs1471960114 745 dbSNP
rs1477775963 745 dbSNP
rs906274086 755 dbSNP
rs1004329900 758 dbSNP
rs1162708120 765 dbSNP
rs1412879602 772 dbSNP
rs1458734297 774 dbSNP
rs764436188 780 dbSNP
rs1003317015 784 dbSNP
rs1439650205 790 dbSNP
rs1470085643 792 dbSNP
rs1335993479 798 dbSNP
rs1199267925 803 dbSNP
rs1338307284 805 dbSNP
rs962661342 810 dbSNP
rs980729774 812 dbSNP
rs1052683445 825 dbSNP
rs539660784 826 dbSNP
rs569083251 834 dbSNP
rs1379560609 836 dbSNP
rs960556397 838 dbSNP
rs1010710296 845 dbSNP
rs566626566 848 dbSNP
rs1351737156 850 dbSNP
rs991946656 860 dbSNP
rs1022129315 865 dbSNP
rs1406344136 866 dbSNP
rs1413457925 871 dbSNP
rs963937618 881 dbSNP
rs568772918 887 dbSNP
rs1471278154 892 dbSNP
rs917373094 892 dbSNP
rs183426669 901 dbSNP
rs977877985 914 dbSNP
rs1457294636 925 dbSNP
rs925990175 936 dbSNP
rs187146386 944 dbSNP
rs1029702343 949 dbSNP
rs573972034 951 dbSNP
rs982859605 955 dbSNP
rs1440905328 964 dbSNP
rs1288873848 966 dbSNP
rs908646967 968 dbSNP
rs1187175968 970 dbSNP
rs867387585 972 dbSNP
rs974249342 973 dbSNP
rs934186115 974 dbSNP
rs1445439783 977 dbSNP
rs1180143302 988 dbSNP
rs1295820491 999 dbSNP
rs544205292 1008 dbSNP
rs887239512 1013 dbSNP
rs1163106729 1021 dbSNP
rs1402710132 1037 dbSNP
rs1411074069 1038 dbSNP
rs1003979217 1044 dbSNP
rs376710775 1049 dbSNP
rs757364411 1050 dbSNP
rs1466527348 1052 dbSNP
rs1174104520 1056 dbSNP
rs1399878037 1060 dbSNP
rs1396894040 1065 dbSNP
rs1038503237 1070 dbSNP
rs556439536 1072 dbSNP
rs1192917402 1076 dbSNP
rs1488759113 1077 dbSNP
rs1413716766 1078 dbSNP
rs1219068049 1097 dbSNP
rs1489124411 1101 dbSNP
rs1308191375 1103 dbSNP
rs781076693 1108 dbSNP
rs1238904215 1110 dbSNP
rs1002263062 1114 dbSNP
rs1302765502 1116 dbSNP
rs1220370729 1117 dbSNP
rs1367491224 1118 dbSNP
rs577980345 1119 dbSNP
rs1045109010 1125 dbSNP
rs73611724 1130 dbSNP
rs960611669 1132 dbSNP
rs191126950 1134 dbSNP
rs560351606 1136 dbSNP
rs939026280 1141 dbSNP
rs1176852095 1142 dbSNP
rs1052165572 1143 dbSNP
rs1020754484 1159 dbSNP
rs966917387 1160 dbSNP
rs892215959 1161 dbSNP
rs1215529168 1162 dbSNP
rs1487096665 1165 dbSNP
rs1350374964 1171 dbSNP
rs1234688375 1178 dbSNP
rs141343221 1179 dbSNP
rs1210175078 1183 dbSNP
rs1311065753 1188 dbSNP
rs1299849710 1190 dbSNP
rs1220928163 1193 dbSNP
rs1341592719 1200 dbSNP
rs1277944412 1204 dbSNP
rs957423321 1210 dbSNP
rs1043573555 1211 dbSNP
rs1303603776 1216 dbSNP
rs1465626133 1220 dbSNP
rs182641601 1222 dbSNP
rs150808101 1233 dbSNP
rs934238578 1240 dbSNP
rs1424148860 1243 dbSNP
rs531321451 1255 dbSNP
rs549477496 1257 dbSNP
rs544522788 1263 dbSNP
rs908726823 1269 dbSNP
rs1275568679 1277 dbSNP
rs1484170642 1285 dbSNP
rs1030007662 1288 dbSNP
rs756680992 1290 dbSNP
rs1201133460 1295 dbSNP
rs898230258 1300 dbSNP
rs1001918605 1306 dbSNP
rs1217218522 1322 dbSNP
rs1342584847 1326 dbSNP
rs1433693975 1327 dbSNP
rs1313716227 1329 dbSNP
rs1395604673 1330 dbSNP
rs1004623944 1344 dbSNP
rs1377157079 1346 dbSNP
rs1054723927 1351 dbSNP
rs780507332 1356 dbSNP
rs1400909730 1360 dbSNP
rs896123584 1361 dbSNP
rs1460298980 1364 dbSNP
rs1015655139 1365 dbSNP
rs1165122582 1376 dbSNP
rs1422863290 1377 dbSNP
rs1013471550 1382 dbSNP
rs1375865023 1385 dbSNP
rs962823421 1388 dbSNP
rs974237924 1396 dbSNP
rs1477551147 1401 dbSNP
rs1358915233 1409 dbSNP
rs754402690 1422 dbSNP
rs1020805076 1423 dbSNP
rs1320118487 1424 dbSNP
rs1311612972 1426 dbSNP
rs966593478 1434 dbSNP
rs6070658 1444 dbSNP
rs1489528005 1447 dbSNP
rs34639404 1449 dbSNP
rs1001094712 1452 dbSNP
rs970701362 1453 dbSNP
rs563218496 1454 dbSNP
rs1389598654 1457 dbSNP
rs1033133574 1459 dbSNP
rs1293871663 1460 dbSNP
rs1457126474 1462 dbSNP
rs533399180 1467 dbSNP
rs1160031122 1481 dbSNP
rs575439207 1482 dbSNP
rs1379081355 1484 dbSNP
rs1180372253 1486 dbSNP
rs1306865433 1488 dbSNP
rs938988809 1491 dbSNP
rs1052057849 1492 dbSNP
rs1390900551 1494 dbSNP
rs1268556474 1496 dbSNP
rs138072958 1496 dbSNP
rs946507712 1498 dbSNP
rs1288458823 1504 dbSNP
rs975460787 1507 dbSNP
rs1043521145 1509 dbSNP
rs899648347 1510 dbSNP
rs1191667810 1518 dbSNP
rs1236849341 1528 dbSNP
rs1332723463 1532 dbSNP
rs1301841811 1536 dbSNP
rs987072396 1542 dbSNP
rs1344582707 1545 dbSNP
rs749700028 1547 dbSNP
rs1226543825 1553 dbSNP
rs1419926039 1570 dbSNP
rs11699115 1571 dbSNP
rs932496969 1577 dbSNP
rs879541436 1590 dbSNP
rs1050987689 1594 dbSNP
rs891046048 1596 dbSNP
rs1004211690 1597 dbSNP
rs1378754806 1600 dbSNP
rs1198722363 1603 dbSNP
rs755473653 1604 dbSNP
rs1488812311 1607 dbSNP
rs1265714525 1616 dbSNP
rs937766753 1632 dbSNP
rs143632358 1635 dbSNP
rs1265120712 1649 dbSNP
rs1282290665 1651 dbSNP
rs1202275164 1656 dbSNP
rs1275381273 1657 dbSNP
rs1232357062 1673 dbSNP
rs896177355 1674 dbSNP
rs1451018287 1676 dbSNP
rs1188930110 1677 dbSNP
rs1339411328 1680 dbSNP
rs1315741982 1683 dbSNP
rs1402227251 1686 dbSNP
rs1415708480 1686 dbSNP
rs1172512195 1687 dbSNP
rs1468698361 1701 dbSNP
rs534072533 1702 dbSNP
rs1447268895 1710 dbSNP
rs1167507095 1711 dbSNP
rs1368687680 1712 dbSNP
rs1042317151 1713 dbSNP
rs995620929 1715 dbSNP
rs1160970133 1721 dbSNP
rs1023067992 1728 dbSNP
rs1321309655 1731 dbSNP
rs1259797125 1732 dbSNP
rs1219044097 1733 dbSNP
rs1338455309 1733 dbSNP
rs1389172606 1734 dbSNP
rs970226807 1737 dbSNP
rs1340627354 1740 dbSNP
rs1440910626 1746 dbSNP
rs982018275 1754 dbSNP
rs900303370 1758 dbSNP
rs1465445169 1759 dbSNP
rs1417731294 1764 dbSNP
rs1367727040 1766 dbSNP
rs549431968 1771 dbSNP
rs1035910208 1772 dbSNP
rs956523746 1773 dbSNP
rs987764047 1776 dbSNP
rs1473240883 1778 dbSNP
rs1237027806 1786 dbSNP
rs1181798891 1800 dbSNP
rs1239964141 1803 dbSNP
rs1199134677 1814 dbSNP
rs1306715480 1817 dbSNP
rs866423326 1817 dbSNP
rs1270621699 1820 dbSNP
rs1295076599 1826 dbSNP
rs1322577268 1828 dbSNP
rs1356570660 1834 dbSNP
rs147158830 1844 dbSNP
rs113666694 1845 dbSNP
rs946455371 1848 dbSNP
rs955387443 1849 dbSNP
rs1263800544 1850 dbSNP
rs1332635400 1851 dbSNP
rs778564876 1856 dbSNP
rs921017230 1858 dbSNP
rs1325916379 1860 dbSNP
rs187065477 1863 dbSNP
rs542046867 1866 dbSNP
rs1413384808 1867 dbSNP
rs538262405 1868 dbSNP
rs1463325351 1869 dbSNP
rs1051406374 1880 dbSNP
rs920101954 1888 dbSNP
rs1187728484 1890 dbSNP
rs771621675 1893 dbSNP
rs1380930163 1895 dbSNP
rs73294769 1898 dbSNP
rs1480262648 1908 dbSNP
rs140416478 1909 dbSNP
rs760206325 1910 dbSNP
rs917654701 1919 dbSNP
rs1223531560 1925 dbSNP
rs1184736620 1928 dbSNP
rs939945705 1930 dbSNP
rs758008443 1934 dbSNP
rs1457325148 1939 dbSNP
rs1042035451 1941 dbSNP
rs1160475075 1946 dbSNP
rs1391514755 1947 dbSNP
rs1037022504 1948 dbSNP
rs764301799 1948 dbSNP
rs936597182 1950 dbSNP
rs1277079819 1951 dbSNP
rs544195301 1953 dbSNP
rs1365278733 1961 dbSNP
rs1421752795 1973 dbSNP
rs762117127 1973 dbSNP
rs1380122950 1975 dbSNP
rs777442347 1975 dbSNP
rs554056945 1977 dbSNP
rs995524274 1993 dbSNP
rs573245830 2006 dbSNP
rs905948848 2017 dbSNP
rs1405729054 2028 dbSNP
rs776664367 2035 dbSNP
rs1424160999 2038 dbSNP
rs1003035684 2049 dbSNP
rs759438095 2050 dbSNP
rs191117002 2051 dbSNP
rs1229090705 2055 dbSNP
rs1219870459 2072 dbSNP
rs989050663 2074 dbSNP
rs1489053300 2081 dbSNP
rs774648037 2082 dbSNP
rs182208564 2090 dbSNP
rs1214778033 2094 dbSNP
rs576026977 2108 dbSNP
rs139677654 2116 dbSNP
rs1016019748 2120 dbSNP
rs1281759420 2125 dbSNP
rs543406789 2136 dbSNP
rs1341393144 2137 dbSNP
rs1255058480 2143 dbSNP
rs979075602 2144 dbSNP
rs1183745924 2154 dbSNP
rs1360897030 2161 dbSNP
rs540656109 2165 dbSNP
rs767775550 2172 dbSNP
rs1158831898 2173 dbSNP
rs564499391 2174 dbSNP
rs986634876 2179 dbSNP
rs765478616 2184 dbSNP
rs1360165301 2188 dbSNP
rs750508253 2189 dbSNP
rs533483939 2194 dbSNP
rs912415009 2204 dbSNP
rs990942630 2205 dbSNP
rs1238699938 2208 dbSNP
rs116023190 2219 dbSNP
rs1323429519 2221 dbSNP
rs1261708852 2225 dbSNP
rs756163800 2232 dbSNP
rs1301247594 2236 dbSNP
rs1220869649 2237 dbSNP
rs770894627 2244 dbSNP
rs555453679 2251 dbSNP
rs1318962536 2254 dbSNP
rs1036924799 2257 dbSNP
rs1380737497 2260 dbSNP
rs1381502926 2275 dbSNP
rs766891599 2278 dbSNP
rs6070663 2283 dbSNP
rs1290343242 2287 dbSNP
rs1405301289 2298 dbSNP
rs1044823207 2299 dbSNP
rs936330516 2301 dbSNP
rs1348518260 2330 dbSNP
rs1467003945 2342 dbSNP
rs1373368410 2347 dbSNP
rs1054141304 2355 dbSNP
rs921838148 2357 dbSNP
rs1223213098 2359 dbSNP
rs1415398830 2360 dbSNP
rs905944553 2369 dbSNP
rs1460443307 2370 dbSNP
rs1051598773 2378 dbSNP
rs868851087 2379 dbSNP
rs1301915073 2387 dbSNP
rs1313669591 2390 dbSNP
rs1458542931 2392 dbSNP
rs1251093604 2397 dbSNP
rs1003393121 2402 dbSNP
rs890260582 2408 dbSNP
rs1323698734 2422 dbSNP
rs149700610 2425 dbSNP
rs1380600825 2433 dbSNP
rs1334617814 2438 dbSNP
rs891935642 2440 dbSNP
rs1279109014 2443 dbSNP
rs549285927 2444 dbSNP
rs755338051 2446 dbSNP
rs1297375242 2456 dbSNP
rs1021799070 2476 dbSNP
rs897172078 2478 dbSNP
rs995509054 2484 dbSNP
rs76296809 2486 dbSNP
rs959615342 2487 dbSNP
rs779086236 2489 dbSNP
rs879675388 2491 dbSNP
rs188757062 2493 dbSNP
rs970844479 2493 dbSNP
rs748527840 2494 dbSNP
rs758030834 2506 dbSNP
rs1489642755 2511 dbSNP
rs144441007 2512 dbSNP
rs923698444 2517 dbSNP
rs78668031 2518 dbSNP
rs1357461835 2520 dbSNP
rs961159231 2528 dbSNP
rs148413815 2547 dbSNP
rs1336252201 2554 dbSNP
rs1306155585 2561 dbSNP
rs1389471668 2570 dbSNP
rs1394677074 2571 dbSNP
rs1430686400 2575 dbSNP
rs919831633 2579 dbSNP
rs1423587291 2589 dbSNP
rs1309926782 2595 dbSNP
rs921558802 2595 dbSNP
rs1368725442 2602 dbSNP
rs554094920 2605 dbSNP
rs572336511 2606 dbSNP
rs1441573731 2608 dbSNP
rs536467704 2617 dbSNP
rs1180213898 2634 dbSNP
rs1435282568 2636 dbSNP
rs34662847 2638 dbSNP
rs931257777 2644 dbSNP
rs1294003792 2649 dbSNP
rs1044383752 2673 dbSNP
rs150221333 2678 dbSNP
rs927313251 2680 dbSNP
rs1288302490 2682 dbSNP
rs1217243424 2683 dbSNP
rs1302463654 2690 dbSNP
rs1260075427 2698 dbSNP
rs1332667187 2708 dbSNP
rs1283656999 2713 dbSNP
rs938709246 2723 dbSNP
rs1343286124 2729 dbSNP
rs1383531628 2730 dbSNP
rs1400795916 2730 dbSNP
rs1222695158 2732 dbSNP
rs1279705283 2732 dbSNP
rs1288627419 2732 dbSNP
rs1315589356 2732 dbSNP
rs1321078802 2732 dbSNP
rs1325407599 2732 dbSNP
rs1398349394 2732 dbSNP
rs1431009824 2732 dbSNP
rs397793591 2732 dbSNP
rs56716236 2732 dbSNP
rs879134422 2732 dbSNP
rs72426341 2734 dbSNP
rs1342429326 2735 dbSNP
rs1336595689 2736 dbSNP
rs1468584064 2738 dbSNP
rs1426223218 2748 dbSNP
rs1230237135 2749 dbSNP
rs940516893 2750 dbSNP
rs1037553777 2758 dbSNP
rs1461787571 2760 dbSNP
rs554420413 2760 dbSNP
rs1459865584 2761 dbSNP
rs1306345286 2762 dbSNP
rs891890131 2762 dbSNP
rs1214847750 2763 dbSNP
rs528205855 2763 dbSNP
rs1247752030 2765 dbSNP
rs995953934 2766 dbSNP
rs367964677 2767 dbSNP
rs1010353444 2768 dbSNP
rs1043245341 2769 dbSNP
rs1329924422 2770 dbSNP
rs576096699 2771 dbSNP
rs1170648803 2772 dbSNP
rs895120281 2777 dbSNP
rs904767843 2779 dbSNP
rs1445319509 2782 dbSNP
rs543142296 2783 dbSNP
rs1029261250 2793 dbSNP
rs1234437813 2801 dbSNP
rs1025161367 2804 dbSNP
rs970897139 2809 dbSNP
rs111617794 2810 dbSNP
rs1031207558 2812 dbSNP
rs1007894903 2823 dbSNP
rs1019745973 2828 dbSNP
rs957813522 2842 dbSNP
rs1313703377 2848 dbSNP
rs961147708 2851 dbSNP
rs989600448 2876 dbSNP
rs746542554 2880 dbSNP
rs1434301965 2881 dbSNP
rs1324959136 2890 dbSNP
rs1305259168 2891 dbSNP
rs373890716 2902 dbSNP
rs1365091130 2903 dbSNP
rs6026624 2908 dbSNP
rs545326790 2915 dbSNP
rs919780927 2920 dbSNP
rs952593874 2921 dbSNP
rs1410103264 2922 dbSNP
rs980396476 2930 dbSNP
rs927249832 2932 dbSNP
rs770526920 2934 dbSNP
rs193292819 2938 dbSNP
rs992877873 2939 dbSNP
rs1230945281 2940 dbSNP
rs527934198 2943 dbSNP
rs45462801 2945 dbSNP
rs1490401714 2947 dbSNP
rs1291447714 2954 dbSNP
rs1290529114 2958 dbSNP
rs561317945 2958 dbSNP
rs911799606 2965 dbSNP
rs370144417 2967 dbSNP
rs946159396 2968 dbSNP
rs1285579896 2971 dbSNP
rs1043195576 2978 dbSNP
rs904672385 2989 dbSNP
rs376774570 2996 dbSNP
rs1051074204 2998 dbSNP
rs1285559133 3009 dbSNP
rs890720487 3012 dbSNP
rs745744050 3017 dbSNP
rs971922295 3018 dbSNP
rs1345152270 3038 dbSNP
rs1301476159 3053 dbSNP
rs920386522 3060 dbSNP
rs1345797963 3062 dbSNP
rs115069585 3064 dbSNP
rs10557 3067 dbSNP
rs550277376 3068 dbSNP
rs1405566442 3073 dbSNP
rs993946937 3076 dbSNP
rs142212962 3080 dbSNP
rs563534361 3080 dbSNP
rs948041710 3080 dbSNP
rs1196751028 3086 dbSNP
rs1046222 3088 dbSNP
rs1046223 3092 dbSNP
rs1240556972 3095 dbSNP
rs1046661782 3097 dbSNP
rs201162898 3097 dbSNP
rs1315624133 3100 dbSNP
rs199823081 3100 dbSNP
rs1000146833 3103 dbSNP
rs1265501292 3103 dbSNP
rs1323205423 3103 dbSNP
rs1026747470 3104 dbSNP
rs1216531844 3105 dbSNP
rs1428668358 3107 dbSNP
rs151118207 3107 dbSNP
rs1459956585 3108 dbSNP
rs141336415 3111 dbSNP
rs1034673533 3115 dbSNP
rs1338548999 3117 dbSNP
rs1428321664 3125 dbSNP
rs960023247 3127 dbSNP
rs1010675017 3136 dbSNP
rs1429895554 3137 dbSNP
rs185104482 3143 dbSNP
rs1185452473 3159 dbSNP
rs538040257 3160 dbSNP
rs1204799477 3164 dbSNP
rs1318350164 3164 dbSNP
rs536116530 3176 dbSNP
rs1461188779 3182 dbSNP
rs946066307 3185 dbSNP
rs554789430 3190 dbSNP
rs1295078418 3201 dbSNP
rs1448382965 3206 dbSNP
rs1285432216 3211 dbSNP
rs961992131 3214 dbSNP
rs1376268667 3222 dbSNP
rs530728328 3223 dbSNP
rs1453282466 3233 dbSNP
rs190349038 3234 dbSNP
rs1300840923 3236 dbSNP
rs1463286262 3243 dbSNP
rs1354783658 3249 dbSNP
rs1050648297 3251 dbSNP
rs890697129 3254 dbSNP
rs930453649 3265 dbSNP
rs1330486923 3281 dbSNP
rs1210937891 3287 dbSNP
rs984196754 3294 dbSNP
rs916654748 3298 dbSNP
rs6026626 3302 dbSNP
rs537174962 3304 dbSNP
rs767680195 3307 dbSNP
rs1241789591 3308 dbSNP
rs1040719110 3309 dbSNP
rs896795952 3312 dbSNP
rs906491882 3313 dbSNP
rs993851871 3316 dbSNP
rs773433809 3317 dbSNP
rs1246684403 3320 dbSNP
rs1053093172 3326 dbSNP
rs888237740 3329 dbSNP
rs1412587844 3331 dbSNP
rs867674487 3341 dbSNP
rs1373712526 3351 dbSNP
rs558213638 3357 dbSNP
rs576493759 3360 dbSNP
rs540630698 3375 dbSNP
rs893998526 3380 dbSNP
rs1011066435 3382 dbSNP
rs1163696260 3384 dbSNP
rs192947033 3391 dbSNP
rs564248719 3394 dbSNP
rs1384047195 3396 dbSNP
rs1367244572 3420 dbSNP
rs1184530650 3424 dbSNP
rs1414836687 3431 dbSNP
rs528160838 3435 dbSNP
rs373996082 3440 dbSNP
rs1180342584 3446 dbSNP
rs1490895793 3450 dbSNP
rs1018622189 3467 dbSNP
rs961987922 3470 dbSNP
rs1357286265 3471 dbSNP
rs761917249 3472 dbSNP
rs542951317 3477 dbSNP
rs1241080063 3478 dbSNP
rs1027970729 3493 dbSNP
rs951943972 3494 dbSNP
rs1351643685 3500 dbSNP
rs1347047580 3511 dbSNP
rs1230837746 3520 dbSNP
rs1278311931 3524 dbSNP
rs372523842 3525 dbSNP
rs967313302 3531 dbSNP
rs978737599 3542 dbSNP
rs1280937869 3550 dbSNP
rs1157429797 3552 dbSNP
rs969453366 3556 dbSNP
rs1269872671 3562 dbSNP
rs184035413 3570 dbSNP
rs531797576 3579 dbSNP
rs1449995883 3591 dbSNP
rs143815160 3593 dbSNP
rs565401787 3597 dbSNP
rs146857568 3599 dbSNP
rs1252714582 3612 dbSNP
rs1486138595 3612 dbSNP
rs986683278 3615 dbSNP
rs1267386933 3617 dbSNP
rs935311821 3618 dbSNP
rs766377682 3625 dbSNP
rs1325351340 3630 dbSNP
rs1283594480 3632 dbSNP
rs1179496312 3633 dbSNP
rs547820116 3635 dbSNP
rs1328892678 3638 dbSNP
rs1363160191 3645 dbSNP
rs1319693043 3649 dbSNP
rs754353496 3653 dbSNP
rs1384910813 3654 dbSNP
rs755533829 3659 dbSNP
rs946908814 3662 dbSNP
rs1392844944 3663 dbSNP
rs1433787715 3666 dbSNP
rs944882228 3667 dbSNP
rs1308101278 3669 dbSNP
rs1371810658 3671 dbSNP
rs1389184794 3674 dbSNP
rs1374906900 3682 dbSNP
rs1194015143 3687 dbSNP
rs188718971 3694 dbSNP
rs889255568 3700 dbSNP
rs1206730567 3710 dbSNP
rs1008666806 3713 dbSNP
rs1036591348 3727 dbSNP
rs1263494708 3729 dbSNP
rs1335706310 3732 dbSNP
rs1342468395 3733 dbSNP
rs1437599771 3734 dbSNP
rs781548765 3738 dbSNP
rs1040507212 3739 dbSNP
rs1277010440 3742 dbSNP
rs78701458 3746 dbSNP
rs897517822 3747 dbSNP
rs74319829 3748 dbSNP
rs1413071470 3756 dbSNP
rs1398917895 3760 dbSNP
rs530049262 3767 dbSNP
rs1475161562 3768 dbSNP
rs567988192 3770 dbSNP
rs1275635944 3771 dbSNP
rs74494035 3772 dbSNP
rs765766536 3775 dbSNP
rs1446350503 3780 dbSNP
rs1243627922 3783 dbSNP
rs1186617352 3786 dbSNP
rs1001321232 3796 dbSNP
rs35692328 3796 dbSNP
rs1194174888 3807 dbSNP
rs11636 3809 dbSNP
rs1249705645 3810 dbSNP
rs370426969 3811 dbSNP
rs180688037 3812 dbSNP
rs1014046866 3815 dbSNP
rs1020126170 3827 dbSNP
rs967299988 3830 dbSNP
rs185503366 3834 dbSNP
rs1250975174 3840 dbSNP
rs1000148840 3855 dbSNP
rs1329876101 3857 dbSNP
rs1409576451 3865 dbSNP
rs1033035178 3866 dbSNP
rs1368848027 3879 dbSNP
rs928026101 3884 dbSNP
rs1391666634 3886 dbSNP
rs1425337044 3887 dbSNP
rs956764905 3888 dbSNP
rs953572725 3889 dbSNP
rs1471720354 3891 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
IDDuplex structurePosition
1
miRNA  3' guguuuGGUAAUACA-CGACGAu 5'
                |:||||  | |||||| 
Target 5' auacuuCUAUUACCUCGCUGCUa 3'
1 - 23
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1, repB ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM545212
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / Control
Location of target site ENST00000397038.1 | 3UTR | AUACUUCUAUUACCUCGCUGCUACUUUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000397038.1 | 3UTR | AAAUACUUCUAUUACCUCGCUGCUACUUUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000397038.1 | 3UTR | AAAUACUUCUAUUACCUCGCUGCUACUUUUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.757 5.6e-5 0.902 2.8e-8 20 Click to see details
GSE21032 Prostate cancer 0.391 1.3e-4 0.256 9.7e-3 83 Click to see details
GSE32688 Pancreatic cancer 0.43 7.0e-3 0.394 1.3e-2 32 Click to see details
GSE19536 Breast cancer 0.202 2.2e-2 0.226 1.2e-2 100 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.327 5.5e-2 0.379 3.1e-2 25 Click to see details
GSE21849 B cell lymphoma 0.296 5.9e-2 0.370 2.4e-2 29 Click to see details
GSE38226 Liver fibrosis -0.33 7.2e-2 -0.407 3.4e-2 21 Click to see details
GSE28260 Renal cortex and medulla -0.418 7.8e-2 -0.330 1.4e-1 13 Click to see details
GSE28544 Breast cancer -0.224 1.5e-1 -0.543 3.1e-3 24 Click to see details
GSE19783 ER- ER- breast cancer 0.117 1.5e-1 0.133 1.2e-1 79 Click to see details
GSE19783 ER+ ER+ breast cancer 0.233 1.6e-1 0.289 1.1e-1 20 Click to see details
GSE26953 Aortic valvular endothelial cells 0.198 1.8e-1 0.218 1.5e-1 24 Click to see details
GSE14794 Lymphoblastoid cells 0.097 1.8e-1 0.100 1.7e-1 90 Click to see details
GSE17306 Multiple myeloma -0.099 2.5e-1 -0.131 1.8e-1 49 Click to see details
GSE17498 Multiple myeloma 0.094 2.8e-1 0.021 4.5e-1 40 Click to see details
GSE27834 Pluripotent stem cells 0.148 2.9e-1 0.032 4.5e-1 16 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.094 3.3e-1 0.015 4.7e-1 25 Click to see details
GSE42095 Differentiated embryonic stem cells 0.076 3.7e-1 -0.010 4.8e-1 23 Click to see details
GSE19350 CNS germ cell tumors 0.09 3.9e-1 -0.077 4.1e-1 12 Click to see details
GSE21687 Ependynoma primary tumors -0.025 4.2e-1 -0.023 4.3e-1 64 Click to see details
GSE21687 Ependynoma primary tumors -0.025 4.2e-1 -0.023 4.3e-1 64 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
PRAD 0.337 0.01 0.232 0.05 50 Click to see details
PAAD 0.916 0.04 1.000 0.5 4 Click to see details
KIRP -0.281 0.06 -0.342 0.03 32 Click to see details
KIRC -0.166 0.09 -0.140 0.13 68 Click to see details
CHOL -0.488 0.09 -0.433 0.12 9 Click to see details
BRCA -0.139 0.1 -0.189 0.04 84 Click to see details
STAD 0.182 0.16 0.336 0.03 32 Click to see details
LUSC -0.144 0.19 -0.187 0.13 38 Click to see details
THCA -0.086 0.26 -0.144 0.14 59 Click to see details
COAD 0.255 0.27 0.048 0.46 8 Click to see details
LIHC -0.086 0.28 -0.025 0.43 49 Click to see details
ESCA 0.197 0.28 -0.009 0.49 11 Click to see details
PCPG -0.437 0.36 -0.500 0.33 3 Click to see details
LUAD 0.097 0.38 0.161 0.31 12 Click to see details
CESC 0.265 0.41 0.500 0.33 3 Click to see details
KICH -0.037 0.43 -0.128 0.27 25 Click to see details
HNSC -0.023 0.44 -0.037 0.41 42 Click to see details
BLCA 0.019 0.47 -0.092 0.36 18 Click to see details
UCEC -0.009 0.49 -0.060 0.4 19 Click to see details
UCEC -0.009 0.49 -0.060 0.4 19 Click to see details
UCEC -0.009 0.49 -0.060 0.4 19 Click to see details
MiRNA Regulatory Network:
Functional analysis:
Strong evidence (reporter assay, western blot, qRT-PCR or qPCR) Other evidence
Transcription factor regulation Circular RNA sponge
691 hsa-miR-15a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000280 BMI1 BMI1 proto-oncogene, polycomb ring finger 5 3
MIRT000282 WNT3A Wnt family member 3A 3 2
MIRT000283 MYB MYB proto-oncogene, transcription factor 5 3
MIRT000284 CDC25A cell division cycle 25A 3 3
MIRT000285 CCND2 cyclin D2 3 5
MIRT000804 RAB9B RAB9B, member RAS oncogene family 1 1
MIRT000806 ACTR1A ARP1 actin related protein 1 homolog A 1 1
MIRT000808 TPI1 triosephosphate isomerase 1 1 1
MIRT000810 PDCD4 programmed cell death 4 3 2
MIRT000812 RAB21 RAB21, member RAS oncogene family 2 1
MIRT000815 BCL2 BCL2, apoptosis regulator 6 13
MIRT000817 WT1 Wilms tumor 1 2 1
MIRT000819 ASXL2 additional sex combs like 2, transcriptional regulator 2 1
MIRT000823 TMEM251 transmembrane protein 251 2 1
MIRT000825 CARD8 caspase recruitment domain family member 8 2 1
MIRT000827 CDC14B cell division cycle 14B 2 1
MIRT000829 CENPJ centromere protein J 2 1
MIRT000831 CEP63 centrosomal protein 63 2 1
MIRT000833 CREBL2 cAMP responsive element binding protein like 2 3 3
MIRT000835 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 1
MIRT000847 GOLGA5 golgin A5 2 1
MIRT000849 GOLPH3L golgi phosphoprotein 3 like 2 1
MIRT000851 GTF2H1 general transcription factor IIH subunit 1 2 1
MIRT000853 H3F3B H3 histone family member 3B 2 1
MIRT000855 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 1
MIRT000857 HDHD2 haloacid dehalogenase like hydrolase domain containing 2 2 1
MIRT000859 HERC6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 2 1
MIRT000863 HRSP12 reactive intermediate imine deaminase A homolog 2 1
MIRT000865 HSDL2 hydroxysteroid dehydrogenase like 2 2 1
MIRT000866 HSPA1A heat shock protein family A (Hsp70) member 1A 2 1
MIRT000868 JUN Jun proto-oncogene, AP-1 transcription factor subunit 2 1
MIRT000878 MCL1 MCL1, BCL2 family apoptosis regulator 2 1
MIRT000880 MSH2 mutS homolog 2 2 1
MIRT000884 OMA1 OMA1 zinc metallopeptidase 2 1
MIRT000886 OSGEPL1 O-sialoglycoprotein endopeptidase like 1 2 1
MIRT000888 PDCD6IP programmed cell death 6 interacting protein 2 1
MIRT000890 PHKB phosphorylase kinase regulatory subunit beta 2 1
MIRT000892 PMS1 PMS1 homolog 1, mismatch repair system component 2 1
MIRT000894 PNN pinin, desmosome associated protein 2 1
MIRT000896 PRIM1 DNA primase subunit 1 2 1
MIRT000898 RAD51C RAD51 paralog C 2 1
MIRT000900 RHOT1 ras homolog family member T1 2 1
MIRT000902 RNASEL ribonuclease L 2 1
MIRT000906 SLC35A1 solute carrier family 35 member A1 2 1
MIRT000908 SLC35B3 solute carrier family 35 member B3 2 1
MIRT000910 TIA1 TIA1 cytotoxic granule associated RNA binding protein 2 1
MIRT000914 UGDH UDP-glucose 6-dehydrogenase 2 1
MIRT000916 UGP2 UDP-glucose pyrophosphorylase 2 2 1
MIRT000922 ZNF559 zinc finger protein 559 2 1
MIRT001227 CCND1 cyclin D1 5 7
MIRT001228 CCNE1 cyclin E1 6 8
MIRT001802 BACE1 beta-secretase 1 2 1
MIRT002946 DMTF1 cyclin D binding myb like transcription factor 1 3 3
MIRT003333 BRCA1 BRCA1, DNA repair associated 2 2
MIRT003334 AKT3 AKT serine/threonine kinase 3 2 4
MIRT003872 WIPF1 WAS/WASL interacting protein family member 1 2 1
MIRT003873 VPS45 vacuolar protein sorting 45 homolog 2 1
MIRT003874 HSP90B1 heat shock protein 90 beta family member 1 2 1
MIRT003875 SKAP2 src kinase associated phosphoprotein 2 3 1
MIRT003876 NT5DC1 5'-nucleotidase domain containing 1 2 1
MIRT003877 FAM69A family with sequence similarity 69 member A 2 1
MIRT003878 C2orf74 chromosome 2 open reading frame 74 1 1
MIRT003879 FAM122C family with sequence similarity 122C 2 1
MIRT003880 PWWP2A PWWP domain containing 2A 2 1
MIRT003881 C17orf80 chromosome 17 open reading frame 80 2 1
MIRT003882 CCDC111 primase and DNA directed polymerase 2 1
MIRT003883 C2orf43 lipid droplet associated hydrolase 2 1
MIRT003884 C4orf27 histone PARylation factor 1 2 1
MIRT003885 NIPAL2 NIPA like domain containing 2 2 1
MIRT003886 TRMT13 tRNA methyltransferase 13 homolog 2 1
MIRT003887 ANAPC16 anaphase promoting complex subunit 16 2 1
MIRT003888 CADM1 cell adhesion molecule 1 3 1
MIRT003891 TMEM184B transmembrane protein 184B 2 1
MIRT003899 APP amyloid beta precursor protein 3 2
MIRT004046 UCP2 uncoupling protein 2 3 1
MIRT004275 VEGFA vascular endothelial growth factor A 6 11
MIRT004680 TSPYL2 TSPY like 2 2 1
MIRT004829 NFKB1 nuclear factor kappa B subunit 1 3 1
MIRT005552 CHUK conserved helix-loop-helix ubiquitous kinase 4 1
MIRT005763 TP53 tumor protein p53 1 1
MIRT006027 FGF7 fibroblast growth factor 7 2 1
MIRT006176 CLCN3 chloride voltage-gated channel 3 4 1
MIRT006177 CRKL CRK like proto-oncogene, adaptor protein 5 2
MIRT006181 MN1 MN1 proto-oncogene, transcriptional regulator 4 1
MIRT006658 Ccnd1 cyclin D1 1 1
MIRT006801 HMGA1 high mobility group AT-hook 1 4 2
MIRT006805 HMGA2 high mobility group AT-hook 2 3 1
MIRT006913 IFNG interferon gamma 2 1
MIRT006998 PURA purine rich element binding protein A 2 2
MIRT007090 RECK reversion inducing cysteine rich protein with kazal motifs 3 2
MIRT032077 DLK1 delta like non-canonical Notch ligand 1 2 1
MIRT051311 PLA2G2D phospholipase A2 group IID 1 1
MIRT051312 ACVR1B activin A receptor type 1B 1 1
MIRT051313 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 1 1
MIRT051314 GCLM glutamate-cysteine ligase modifier subunit 1 1
MIRT051315 PCF11 PCF11 cleavage and polyadenylation factor subunit 1 1
MIRT051316 HIST1H2BK histone cluster 1 H2B family member k 1 1
MIRT051317 ODC1 ornithine decarboxylase 1 1 1
MIRT051318 CALD1 caldesmon 1 1 1
MIRT051319 RPP30 ribonuclease P/MRP subunit p30 1 1
MIRT051320 ASNSD1 asparagine synthetase domain containing 1 1 1
MIRT051321 CCNYL1 cyclin Y like 1 1 1
MIRT051322 RGPD5 RANBP2-like and GRIP domain containing 5 1 1
MIRT051323 PREB prolactin regulatory element binding 1 1
MIRT051324 PDHX pyruvate dehydrogenase complex component X 1 1
MIRT051325 SNX6 sorting nexin 6 1 1
MIRT051326 CNN3 calponin 3 1 1
MIRT051327 KIF1A kinesin family member 1A 1 1
MIRT051328 NAB1 NGFI-A binding protein 1 1 1
MIRT051329 CCT6B chaperonin containing TCP1 subunit 6B 1 1
MIRT051330 CHD4 chromodomain helicase DNA binding protein 4 1 1
MIRT051331 CLCC1 chloride channel CLIC like 1 1 1
MIRT051332 GDI2 GDP dissociation inhibitor 2 1 1
MIRT051333 BRWD1 bromodomain and WD repeat domain containing 1 1 1
MIRT051334 MAPK6 mitogen-activated protein kinase 6 1 1
MIRT051335 PSMC4 proteasome 26S subunit, ATPase 4 1 1
MIRT051336 ATF2 activating transcription factor 2 1 1
MIRT051337 ATP6AP1 ATPase H+ transporting accessory protein 1 1 1
MIRT051338 FBXO3 F-box protein 3 1 1
MIRT051339 PRDX3 peroxiredoxin 3 1 1
MIRT051340 CABIN1 calcineurin binding protein 1 1 1
MIRT051341 FASN fatty acid synthase 1 3
MIRT051342 SEC63 SEC63 homolog, protein translocation regulator 1 1
MIRT051343 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 1 1
MIRT051344 DSTYK dual serine/threonine and tyrosine protein kinase 1 1
MIRT051345 FOXO1 forkhead box O1 4 2
MIRT051346 TMEM214 transmembrane protein 214 1 1
MIRT051347 TRIM28 tripartite motif containing 28 1 1
MIRT051348 NOP2 NOP2 nucleolar protein 1 1
MIRT051349 MYBL1 MYB proto-oncogene like 1 1 1
MIRT051350 TTC1 tetratricopeptide repeat domain 1 1 1
MIRT051351 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 2
MIRT052930 REPIN1 replication initiator 1 2 1
MIRT053079 KLF4 Kruppel like factor 4 1 1
MIRT054283 YAP1 Yes associated protein 1 3 1
MIRT054424 CARM1 coactivator associated arginine methyltransferase 1 3 1
MIRT054895 SOX5 SRY-box 5 2 1
MIRT055421 SHOC2 SHOC2, leucine rich repeat scaffold protein 1 6
MIRT055811 PLEKHA1 pleckstrin homology domain containing A1 1 1
MIRT057514 CEP55 centrosomal protein 55 1 4
MIRT057729 ZDHHC16 zinc finger DHHC-type containing 16 1 1
MIRT057906 STXBP3 syntaxin binding protein 3 1 1
MIRT061005 C1ORF21 chromosome 1 open reading frame 21 1 3
MIRT061244 AMOTL1 angiomotin like 1 1 6
MIRT061529 BTG2 BTG anti-proliferation factor 2 1 1
MIRT063394 ETNK1 ethanolamine kinase 1 1 1
MIRT065711 TARBP2 TARBP2, RISC loading complex RNA binding subunit 1 2
MIRT066291 MTFR1L mitochondrial fission regulator 1 like 1 1
MIRT066312 USP15 ubiquitin specific peptidase 15 1 1
MIRT068655 AKAP11 A-kinase anchoring protein 11 1 1
MIRT071206 FCF1 FCF1, rRNA-processing protein 1 1
MIRT072822 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 1 3
MIRT074530 PAGR1 PAXIP1 associated glutamate rich protein 1 1 2
MIRT075249 SNTB2 syntrophin beta 2 1 2
MIRT075273 VPS4A vacuolar protein sorting 4 homolog A 1 4
MIRT075891 C16ORF72 chromosome 16 open reading frame 72 1 4
MIRT076791 GOSR1 golgi SNAP receptor complex member 1 1 1
MIRT077781 MINK1 misshapen like kinase 1 1 1
MIRT078282 RPS6KB1 ribosomal protein S6 kinase B1 1 1
MIRT079655 NAPG NSF attachment protein gamma 1 6
MIRT080011 GALNT1 polypeptide N-acetylgalactosaminyltransferase 1 1 2
MIRT082985 PNPLA6 patatin like phospholipase domain containing 6 1 1
MIRT083265 ZCCHC3 zinc finger CCHC-type containing 3 1 3
MIRT084462 SOWAHC sosondowah ankyrin repeat domain family member C 1 2
MIRT085215 CCNT2 cyclin T2 1 1
MIRT086005 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 1 1
MIRT087424 ZNRF3 zinc and ring finger 3 1 1
MIRT087554 YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta 1 1
MIRT088102 SEPT2 septin 2 1 1
MIRT089105 B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 1 2
MIRT089206 ACTR2 ARP2 actin related protein 2 homolog 1 2
MIRT090446 CDV3 CDV3 homolog 1 1
MIRT090688 U2SURP U2 snRNP associated SURP domain containing 1 1
MIRT091667 RARB retinoic acid receptor beta 1 3
MIRT092190 ITPR1 inositol 1,4,5-trisphosphate receptor type 1 1 1
MIRT092209 BHLHE40 basic helix-loop-helix family member e40 1 1
MIRT093682 PI4K2B phosphatidylinositol 4-kinase type 2 beta 1 3
MIRT096234 CANX calnexin 1 1
MIRT098827 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 1
MIRT099631 E2F3 E2F transcription factor 3 1 1
MIRT100207 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 1 1
MIRT100364 HSPA1B heat shock protein family A (Hsp70) member 1B 2 5
MIRT100566 PIM1 Pim-1 proto-oncogene, serine/threonine kinase 1 1
MIRT100896 CD2AP CD2 associated protein 1 1
MIRT102434 CALU calumenin 1 2
MIRT102632 UBN2 ubinuclein 2 1 6
MIRT102971 EN2 engrailed homeobox 2 1 3
MIRT103092 MAFK MAF bZIP transcription factor K 1 3
MIRT103856 FOXK1 forkhead box K1 1 2
MIRT104015 USP42 ubiquitin specific peptidase 42 1 3
MIRT106292 ZFHX4 zinc finger homeobox 4 1 3
MIRT106733 RAD23B RAD23 homolog B, nucleotide excision repair protein 1 2
MIRT107218 ZBTB34 zinc finger and BTB domain containing 34 1 1
MIRT108983 SLC9A6 solute carrier family 9 member A6 1 1
MIRT109240 ZNF275 zinc finger protein 275 1 1
MIRT110051 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 1 4
MIRT112969 LUZP1 leucine zipper protein 1 1 3
MIRT114923 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 1 1
MIRT117655 SCAMP4 secretory carrier membrane protein 4 1 1
MIRT120680 PAK2 p21 (RAC1) activated kinase 2 1 1
MIRT127725 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 1 2
MIRT128798 UBE4A ubiquitination factor E4A 1 1
MIRT129055 ARCN1 archain 1 1 1
MIRT130380 PTPRJ protein tyrosine phosphatase, receptor type J 1 1
MIRT131097 TMEM138 transmembrane protein 138 1 1
MIRT132734 RASSF5 Ras association domain family member 5 1 1
MIRT132831 MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 1 1
MIRT133334 BCL7A BCL tumor suppressor 7A 1 1
MIRT133769 SKI SKI proto-oncogene 1 2
MIRT137517 RCOR1 REST corepressor 1 1 1
MIRT140146 SPRED1 sprouty related EVH1 domain containing 1 1 2
MIRT140820 SMAD3 SMAD family member 3 1 1
MIRT141243 SCAMP5 secretory carrier membrane protein 5 1 1
MIRT141279 UBE2Q2 ubiquitin conjugating enzyme E2 Q2 1 1
MIRT142237 DCTN5 dynactin subunit 5 1 5
MIRT144019 PSKH1 protein serine kinase H1 1 1
MIRT145377 ANKRD13B ankyrin repeat domain 13B 1 1
MIRT146014 EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit 1 1
MIRT146351 PNPO pyridoxamine 5'-phosphate oxidase 1 1
MIRT146496 SNX11 sorting nexin 11 1 1
MIRT148302 RNF138 ring finger protein 138 1 1
MIRT150354 IER2 immediate early response 2 1 1
MIRT152274 TNFSF9 TNF superfamily member 9 1 2
MIRT152503 ENTPD6 ectonucleoside triphosphate diphosphohydrolase 6 (putative) 1 1
MIRT152736 KIF3B kinesin family member 3B 1 1
MIRT152922 NOL4L nucleolar protein 4 like 1 1
MIRT154043 RASSF2 Ras association domain family member 2 1 1
MIRT154392 CDS2 CDP-diacylglycerol synthase 2 1 1
MIRT156452 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 1 1
MIRT158519 TNRC6B trinucleotide repeat containing 6B 1 3
MIRT158990 EPT1 selenoprotein I 1 1
MIRT159580 PEX13 peroxisomal biogenesis factor 13 1 1
MIRT160169 TET3 tet methylcytosine dioxygenase 3 1 1
MIRT163253 PRKCD protein kinase C delta 1 1
MIRT164260 CPEB2 cytoplasmic polyadenylation element binding protein 2 1 1
MIRT164952 TADA2B transcriptional adaptor 2B 1 1
MIRT165172 GRAMD3 GRAM domain containing 2B 1 2
MIRT165883 CREBRF CREB3 regulatory factor 1 2
MIRT168680 CDKN1A cyclin dependent kinase inhibitor 1A 1 1
MIRT169058 IRF4 interferon regulatory factor 4 1 1
MIRT170136 KLHDC10 kelch domain containing 10 1 1
MIRT170733 UBE3C ubiquitin protein ligase E3C 1 1
MIRT171597 SUN1 Sad1 and UNC84 domain containing 1 1 1
MIRT172813 HMBOX1 homeobox containing 1 1 1
MIRT174781 RNF38 ring finger protein 38 1 1
MIRT175232 PSAT1 phosphoserine aminotransferase 1 1 4
MIRT175524 ZBTB33 zinc finger and BTB domain containing 33 1 1
MIRT179008 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 1 1
MIRT180909 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 4
MIRT186371 PNRC2 proline rich nuclear receptor coactivator 2 1 1
MIRT189760 CDADC1 cytidine and dCMP deaminase domain containing 1 1 1
MIRT189961 AGO4 argonaute 4, RISC catalytic component 1 1
MIRT190184 GPR180 G protein-coupled receptor 180 1 3
MIRT191454 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 1 1
MIRT191625 SLC39A9 solute carrier family 39 member 9 1 3
MIRT194237 FAM103A1 family with sequence similarity 103 member A1 1 3
MIRT194903 RBBP6 RB binding protein 6, ubiquitin ligase 1 4
MIRT196275 PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 1 1
MIRT196450 TAOK1 TAO kinase 1 1 1
MIRT201456 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 1 4
MIRT204592 HSPE1-MOB4 HSPE1-MOB4 readthrough 1 4
MIRT204623 MOB4 MOB family member 4, phocein 1 4
MIRT204741 BZW1 basic leucine zipper and W2 domains 1 1 6
MIRT206020 NUP50 nucleoporin 50 1 4
MIRT211199 FGF2 fibroblast growth factor 2 1 2
MIRT211314 HSPA4L heat shock protein family A (Hsp70) member 4 like 1 2
MIRT212604 RBPJ recombination signal binding protein for immunoglobulin kappa J region 1 4
MIRT217743 TBPL1 TATA-box binding protein like 1 1 2
MIRT223681 FZD6 frizzled class receptor 6 1 3
MIRT224965 BAG4 BCL2 associated athanogene 4 1 1
MIRT229343 ZNF449 zinc finger protein 449 1 1
MIRT229860 YIPF6 Yip1 domain family member 6 1 1
MIRT230120 DDX3Y DEAD-box helicase 3, Y-linked 1 1
MIRT234342 MSL1 male specific lethal 1 homolog 1 4
MIRT245003 ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 1 1
MIRT246938 PRRC2C proline rich coiled-coil 2C 1 1
MIRT247095 WEE1 WEE1 G2 checkpoint kinase 1 2
MIRT247236 ELK4 ELK4, ETS transcription factor 1 2
MIRT247368 GABARAPL1 GABA type A receptor associated protein like 1 1 3
MIRT248550 PDIK1L PDLIM1 interacting kinase 1 like 1 1
MIRT248765 ATXN7L3B ataxin 7 like 3B 1 2
MIRT249449 ZNF691 zinc finger protein 691 1 2
MIRT251487 DYNLL2 dynein light chain LC8-type 2 1 2
MIRT255333 SRPRB SRP receptor beta subunit 1 3
MIRT256305 CDC42SE2 CDC42 small effector 2 1 1
MIRT258410 WIPI2 WD repeat domain, phosphoinositide interacting 2 1 2
MIRT265056 TBRG1 transforming growth factor beta regulator 1 1 1
MIRT265076 CHEK1 checkpoint kinase 1 1 2
MIRT267254 TMEM109 transmembrane protein 109 1 1
MIRT267527 C1ORF226 chromosome 1 open reading frame 226 1 1
MIRT270454 SIRT4 sirtuin 4 1 1
MIRT270552 SETD1B SET domain containing 1B 1 1
MIRT273665 HOXC8 homeobox C8 1 1
MIRT274741 RAB3IP RAB3A interacting protein 1 1
MIRT277504 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 1 2
MIRT282532 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT286968 MLLT6 MLLT6, PHD finger containing 1 1
MIRT289625 CBX2 chromobox 2 1 1
MIRT294283 ZFP28 ZFP28 zinc finger protein 1 1
MIRT295810 CHMP4B charged multivesicular body protein 4B 1 1
MIRT297778 GABPA GA binding protein transcription factor alpha subunit 1 2
MIRT300100 STRADB STE20-related kinase adaptor beta 1 1
MIRT300992 MTMR3 myotubularin related protein 3 1 1
MIRT302611 CRIM1 cysteine rich transmembrane BMP regulator 1 1 3
MIRT302825 SOCS5 suppressor of cytokine signaling 5 1 1
MIRT307141 CTDSPL CTD small phosphatase like 1 2
MIRT313675 ITGA2 integrin subunit alpha 2 1 1
MIRT314051 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 1 4
MIRT317722 PPIL1 peptidylprolyl isomerase like 1 1 4
MIRT319331 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 1 1
MIRT320626 ZNRF2 zinc and ring finger 2 1 1
MIRT324839 IFT74 intraflagellar transport 74 1 1
MIRT326301 OCRL OCRL, inositol polyphosphate-5-phosphatase 1 1
MIRT327962 CHIC1 cysteine rich hydrophobic domain 1 1 3
MIRT437998 KLF6 Kruppel like factor 6 2 1
MIRT438163 PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 3 1
MIRT438610 RET ret proto-oncogene 1 1
MIRT443809 SIDT2 SID1 transmembrane family member 2 2 1
MIRT446508 ASCC1 activating signal cointegrator 1 complex subunit 1 1 1
MIRT447778 DMRT2 doublesex and mab-3 related transcription factor 2 1 1
MIRT448440 TLL1 tolloid like 1 1 1
MIRT449190 LUC7L3 LUC7 like 3 pre-mRNA splicing factor 1 1
MIRT451839 ALDH3B1 aldehyde dehydrogenase 3 family member B1 1 1
MIRT453288 EFTUD2 elongation factor Tu GTP binding domain containing 2 1 1
MIRT453754 CSNK1E casein kinase 1 epsilon 1 1
MIRT454970 TPM2 tropomyosin 2 1 1
MIRT456867 ZNF460 zinc finger protein 460 1 5
MIRT460224 FGFR4 fibroblast growth factor receptor 4 1 1
MIRT460438 DOCK11 dedicator of cytokinesis 11 1 1
MIRT461564 ACTR3B ARP3 actin related protein 3 homolog B 1 1
MIRT463167 ZNF367 zinc finger protein 367 1 5
MIRT464668 UBE2V1 ubiquitin conjugating enzyme E2 V1 1 4
MIRT464751 UBE2Q1 ubiquitin conjugating enzyme E2 Q1 1 2
MIRT465165 TSC22D2 TSC22 domain family member 2 1 1
MIRT465570 TOB2 transducer of ERBB2, 2 1 1
MIRT465926 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 1 4
MIRT466008 TMEM189 transmembrane protein 189 1 4
MIRT466298 TM4SF1 transmembrane 4 L six family member 1 1 1
MIRT466436 TFAP2A transcription factor AP-2 alpha 1 4
MIRT466917 STK38 serine/threonine kinase 38 1 5
MIRT467002 SSRP1 structure specific recognition protein 1 1 3
MIRT468052 SIK1 salt inducible kinase 1 1 2
MIRT468151 SH3BP4 SH3 domain binding protein 4 1 1
MIRT468676 SEC24A SEC24 homolog A, COPII coat complex component 1 2
MIRT469090 RNF168 ring finger protein 168 1 1
MIRT469415 REL REL proto-oncogene, NF-kB subunit 1 3
MIRT471038 PISD phosphatidylserine decarboxylase 1 5
MIRT471495 PDE4D phosphodiesterase 4D 1 2
MIRT471956 NR6A1 nuclear receptor subfamily 6 group A member 1 1 1
MIRT472263 NFIC nuclear factor I C 1 1
MIRT472665 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 1 2
MIRT474318 LAMC1 laminin subunit gamma 1 1 1
MIRT474828 KIAA0226 RUN and cysteine rich domain containing beclin 1 interacting protein 1 1
MIRT475068 IVNS1ABP influenza virus NS1A binding protein 1 3
MIRT475123 IPPK inositol-pentakisphosphate 2-kinase 1 1
MIRT475539 HOXA3 homeobox A3 1 4
MIRT475720 HEYL hes related family bHLH transcription factor with YRPW motif-like 1 1
MIRT475843 HDGF heparin binding growth factor 1 2
MIRT476259 GNB1 G protein subunit beta 1 1 4
MIRT476276 GNAL G protein subunit alpha L 1 3
MIRT476698 FURIN furin, paired basic amino acid cleaving enzyme 1 1
MIRT477565 EIF1AX eukaryotic translation initiation factor 1A, X-linked 1 4
MIRT477849 DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 1 1
MIRT478911 CPSF7 cleavage and polyadenylation specific factor 7 1 3
MIRT479457 CDK6 cyclin dependent kinase 6 1 1
MIRT479988 CARD10 caspase recruitment domain family member 10 1 1
MIRT481181 AVL9 AVL9 cell migration associated 1 3
MIRT482370 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT482556 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 1 5
MIRT482581 ABHD2 abhydrolase domain containing 2 1 1
MIRT484778 ABCC6 ATP binding cassette subfamily C member 6 1 2
MIRT485215 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 1 4
MIRT487394 C10orf54 V-set immunoregulatory receptor 1 1
MIRT492715 PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein 1 1
MIRT494354 CASKIN1 CASK interacting protein 1 1 1
MIRT495146 ZNRF1 zinc and ring finger 1 1 1
MIRT496019 CD180 CD180 molecule 1 1
MIRT497776 KIAA0895 KIAA0895 1 1
MIRT498984 ORC4 origin recognition complex subunit 4 1 4
MIRT499456 ODF2L outer dense fiber of sperm tails 2 like 1 4
MIRT499619 DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 1 4
MIRT500097 L2HGDH L-2-hydroxyglutarate dehydrogenase 1 4
MIRT500321 ZNF622 zinc finger protein 622 1 5
MIRT500425 ZMAT3 zinc finger matrin-type 3 1 2
MIRT500580 USP53 ubiquitin specific peptidase 53 1 1
MIRT500860 SYPL1 synaptophysin like 1 1 4
MIRT500936 SRPR SRP receptor alpha subunit 1 4
MIRT500953 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 1 4
MIRT501089 SMAD7 SMAD family member 7 1 4
MIRT501506 PRICKLE2 prickle planar cell polarity protein 2 1 1
MIRT502038 LRIG2 leucine rich repeats and immunoglobulin like domains 2 1 1
MIRT502151 KIF5B kinesin family member 5B 1 5
MIRT502496 FAM122B family with sequence similarity 122B 1 4
MIRT502570 E2F7 E2F transcription factor 7 1 6
MIRT502643 DDX3X DEAD-box helicase 3, X-linked 1 4
MIRT502922 CDCA4 cell division cycle associated 4 1 5
MIRT502950 CDC37L1 cell division cycle 37 like 1 1 5
MIRT503140 ATG9A autophagy related 9A 1 4
MIRT504338 ASGR2 asialoglycoprotein receptor 2 1 3
MIRT504540 ZNF620 zinc finger protein 620 1 3
MIRT504855 HAUS3 HAUS augmin like complex subunit 3 1 3
MIRT505116 YTHDC1 YTH domain containing 1 1 3
MIRT505349 TMEM245 transmembrane protein 245 1 3
MIRT505398 TMEM100 transmembrane protein 100 1 1
MIRT505505 SRSF1 serine and arginine rich splicing factor 1 1 3
MIRT505549 SNX16 sorting nexin 16 1 3
MIRT505686 SESTD1 SEC14 and spectrin domain containing 1 1 3
MIRT505911 RIMS3 regulating synaptic membrane exocytosis 3 1 3
MIRT505930 RCAN3 RCAN family member 3 1 2
MIRT506112 PPIG peptidylprolyl isomerase G 1 3
MIRT506138 PLRG1 pleiotropic regulator 1 1 2
MIRT506166 PLAG1 PLAG1 zinc finger 1 5
MIRT506194 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 3
MIRT506487 MYO5A myosin VA 1 4
MIRT506854 KIF23 kinesin family member 23 1 4
MIRT507002 HNRNPDL heterogeneous nuclear ribonucleoprotein D like 1 3
MIRT507820 CDK1 cyclin dependent kinase 1 1 3
MIRT507853 CCNE2 cyclin E2 1 3
MIRT507877 CBX6 chromobox 6 1 1
MIRT508041 AXIN2 axin 2 1 3
MIRT508644 CASK calcium/calmodulin dependent serine protein kinase 1 2
MIRT509368 DMPK DM1 protein kinase 1 5
MIRT509693 ATAD5 ATPase family, AAA domain containing 5 1 2
MIRT510047 AKR1B10 aldo-keto reductase family 1 member B10 1 2
MIRT511847 GPATCH8 G-patch domain containing 8 1 3
MIRT512288 ARHGDIA Rho GDP dissociation inhibitor alpha 1 4
MIRT512646 CPEB3 cytoplasmic polyadenylation element binding protein 3 1 3
MIRT513854 JARID2 jumonji and AT-rich interaction domain containing 2 1 4
MIRT514020 CAMSAP1 calmodulin regulated spectrin associated protein 1 1 3
MIRT514042 ATG14 autophagy related 14 1 1
MIRT518095 TRIM35 tripartite motif containing 35 1 1
MIRT518533 FLCN folliculin 1 3
MIRT518998 NNT nicotinamide nucleotide transhydrogenase 1 2
MIRT521055 SLC2A3 solute carrier family 2 member 3 1 2
MIRT521207 SBNO1 strawberry notch homolog 1 1 3
MIRT521818 POM121C POM121 transmembrane nucleoporin C 1 1
MIRT522098 NUFIP2 NUFIP2, FMR1 interacting protein 2 1 3
MIRT522778 LAMP2 lysosomal associated membrane protein 2 1 3
MIRT537815 EFNB2 ephrin B2 1 2
MIRT539902 RPL14 ribosomal protein L14 1 2
MIRT540847 GNAT1 G protein subunit alpha transducin 1 1 2
MIRT541217 HOXA10 homeobox A10 1 1
MIRT541432 CBX4 chromobox 4 1 2
MIRT542810 PHC3 polyhomeotic homolog 3 1 2
MIRT542837 PDCD1 programmed cell death 1 1 3
MIRT543062 BAZ2A bromodomain adjacent to zinc finger domain 2A 1 1
MIRT543310 ZNF585B zinc finger protein 585B 1 1
MIRT543411 ANAPC13 anaphase promoting complex subunit 13 1 1
MIRT543529 PRSS21 protease, serine 21 1 1
MIRT543801 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 1 2
MIRT543839 GSG1 germ cell associated 1 1 1
MIRT544575 POLDIP3 DNA polymerase delta interacting protein 3 1 1
MIRT544593 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 1 2
MIRT544916 CLSPN claspin 1 1
MIRT544969 UGT2B4 UDP glucuronosyltransferase family 2 member B4 1 1
MIRT545190 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 1 2
MIRT545351 CCDC83 coiled-coil domain containing 83 1 1
MIRT545686 DECR1 2,4-dienoyl-CoA reductase 1 1 1
MIRT545961 ZBTB10 zinc finger and BTB domain containing 10 1 1
MIRT545973 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT546118 USP48 ubiquitin specific peptidase 48 1 2
MIRT546611 SALL1 spalt like transcription factor 1 1 2
MIRT546619 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT546640 RTN4 reticulon 4 1 1
MIRT547069 PNISR PNN interacting serine and arginine rich protein 1 2
MIRT547131 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 1 1
MIRT547233 PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 1 2
MIRT547305 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 1 2
MIRT547406 MKX mohawk homeobox 1 1
MIRT547463 MBD4 methyl-CpG binding domain 4, DNA glycosylase 1 1
MIRT547546 LRRFIP2 LRR binding FLII interacting protein 2 1 2
MIRT547661 KPNA3 karyopherin subunit alpha 3 1 1
MIRT547702 KPNA1 karyopherin subunit alpha 1 1 2
MIRT547968 HIGD1A HIG1 hypoxia inducible domain family member 1A 1 2
MIRT548001 HCFC2 host cell factor C2 1 2
MIRT548018 GRB2 growth factor receptor bound protein 2 1 2
MIRT548219 FKBP1A FK506 binding protein 1A 1 1
MIRT548275 FBXL20 F-box and leucine rich repeat protein 20 1 1
MIRT548727 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT548809 CLIP4 CAP-Gly domain containing linker protein family member 4 1 2
MIRT548946 CDK17 cyclin dependent kinase 17 1 2
MIRT549076 CACUL1 CDK2 associated cullin domain 1 1 1
MIRT549123 C11orf24 chromosome 11 open reading frame 24 1 2
MIRT549278 ASH1L ASH1 like histone lysine methyltransferase 1 2
MIRT549389 AMOT angiomotin 1 1
MIRT550405 SLC29A1 solute carrier family 29 member 1 (Augustine blood group) 1 2
MIRT550470 OSCAR osteoclast associated, immunoglobulin-like receptor 1 2
MIRT550619 MTHFR methylenetetrahydrofolate reductase 1 1
MIRT550827 FAM229B family with sequence similarity 229 member B 1 1
MIRT551383 EPM2AIP1 EPM2A interacting protein 1 1 1
MIRT551621 ZNF267 zinc finger protein 267 1 1
MIRT551740 SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 1 1
MIRT552039 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 1 1
MIRT552348 ZNF704 zinc finger protein 704 1 1
MIRT552744 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 1 1
MIRT553442 TPM3 tropomyosin 3 1 1
MIRT553565 TMEM161B transmembrane protein 161B 1 1
MIRT553620 TM7SF3 transmembrane 7 superfamily member 3 1 1
MIRT553777 TAF13 TATA-box binding protein associated factor 13 1 2
MIRT553812 SZRD1 SUZ RNA binding domain containing 1 1 2
MIRT554702 RNF149 ring finger protein 149 1 1
MIRT554965 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT555035 RAB23 RAB23, member RAS oncogene family 1 1
MIRT555143 PTPRD protein tyrosine phosphatase, receptor type D 1 1
MIRT555229 PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 1 2
MIRT555278 PRDM4 PR/SET domain 4 1 1
MIRT555431 PPAP2B phospholipid phosphatase 3 1 1
MIRT556385 LURAP1L leucine rich adaptor protein 1 like 1 1
MIRT556861 KANK1 KN motif and ankyrin repeat domains 1 1 2
MIRT557284 HIST2H2BE histone cluster 2 H2B family member e 1 1
MIRT557484 GPR27 G protein-coupled receptor 27 1 2
MIRT558041 EXT1 exostosin glycosyltransferase 1 1 1
MIRT558511 CYP26B1 cytochrome P450 family 26 subfamily B member 1 1 2
MIRT558664 CNKSR3 CNKSR family member 3 1 1
MIRT559006 CA8 carbonic anhydrase 8 1 1
MIRT559155 BTN3A3 butyrophilin subfamily 3 member A3 1 1
MIRT559536 ARHGAP12 Rho GTPase activating protein 12 1 3
MIRT560855 OSBPL3 oxysterol binding protein like 3 1 1
MIRT561153 KRT33B keratin 33B 1 1
MIRT561404 TUBB2A tubulin beta 2A class IIa 1 1
MIRT561878 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 1 1
MIRT562031 LANCL1 LanC like 1 1 1
MIRT562204 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 1 1
MIRT562881 KIAA1456 KIAA1456 1 1
MIRT563090 SLC25A12 solute carrier family 25 member 12 1 2
MIRT563507 DLGAP3 DLG associated protein 3 1 1
MIRT563705 THRAP3 thyroid hormone receptor associated protein 3 1 1
MIRT563849 SMDT1 single-pass membrane protein with aspartate rich tail 1 1 1
MIRT563900 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 1 1
MIRT564336 CCNT1 cyclin T1 1 1
MIRT564482 ZNF391 zinc finger protein 391 1 1
MIRT564556 CCDC80 coiled-coil domain containing 80 1 1
MIRT564838 ZBTB16 zinc finger and BTB domain containing 16 1 1
MIRT564954 XKR7 XK related 7 1 1
MIRT564987 WNK3 WNK lysine deficient protein kinase 3 1 1
MIRT565041 VAV2 vav guanine nucleotide exchange factor 2 1 1
MIRT565400 TGFBR3 transforming growth factor beta receptor 3 1 1
MIRT566122 RASEF RAS and EF-hand domain containing 1 1
MIRT566654 NCKAP1 NCK associated protein 1 1 1
MIRT566834 MAP3K7 mitogen-activated protein kinase kinase kinase 7 1 1
MIRT567017 KLHL15 kelch like family member 15 1 1
MIRT567450 GNG12 G protein subunit gamma 12 1 1
MIRT567482 FZD9 frizzled class receptor 9 1 1
MIRT568025 CMTM4 CKLF like MARVEL transmembrane domain containing 4 1 1
MIRT568143 CCDC88C coiled-coil domain containing 88C 1 1
MIRT568477 ARMC12 armadillo repeat containing 12 1 1
MIRT568575 AHNAK2 AHNAK nucleoprotein 2 1 1
MIRT568621 ACVR2A activin A receptor type 2A 1 1
MIRT570464 TLK1 tousled like kinase 1 1 2
MIRT571123 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT571287 TTLL5 tubulin tyrosine ligase like 5 1 1
MIRT571431 RIF1 replication timing regulatory factor 1 1 1
MIRT571662 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT571824 PHF19 PHD finger protein 19 1 1
MIRT571926 LSM11 LSM11, U7 small nuclear RNA associated 1 2
MIRT574062 PROSC pyridoxal phosphate binding protein 1 1
MIRT574207 CLEC2D C-type lectin domain family 2 member D 1 1
MIRT574542 PDIA6 protein disulfide isomerase family A member 6 1 2
MIRT574595 N4BP1 NEDD4 binding protein 1 1 2
MIRT575886 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 1 1
MIRT575928 Dmpk dystrophia myotonica-protein kinase 1 1
MIRT576100 Pdcd1 programmed cell death 1 1 1
MIRT576593 Npepps aminopeptidase puromycin sensitive 1 1
MIRT614697 TRAK1 trafficking kinesin protein 1 1 1
MIRT616471 ADRA2B adrenoceptor alpha 2B 1 1
MIRT618900 ANKMY1 ankyrin repeat and MYND domain containing 1 1 1
MIRT621501 GPRC5A G protein-coupled receptor class C group 5 member A 1 2
MIRT640542 C3orf36 chromosome 3 open reading frame 36 1 1
MIRT645514 BSPRY B-box and SPRY domain containing 1 1
MIRT646599 ANKRD36 ankyrin repeat domain 36 1 1
MIRT648788 KLHL40 kelch like family member 40 1 1
MIRT655815 NOTCH2 notch 2 1 2
MIRT658796 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 1 1
MIRT659260 CUL3 cullin 3 1 1
MIRT680986 DCAF17 DDB1 and CUL4 associated factor 17 1 1
MIRT682280 RS1 retinoschisin 1 1 1
MIRT682518 GLP2R glucagon like peptide 2 receptor 1 1
MIRT691713 FLOT2 flotillin 2 1 2
MIRT693934 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 1 1
MIRT701510 NEGR1 neuronal growth regulator 1 1 1
MIRT702096 MCFD2 multiple coagulation factor deficiency 2 1 1
MIRT702879 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 1 1
MIRT713423 SLC35E2B solute carrier family 35 member E2B 1 1
MIRT714442 ARHGAP32 Rho GTPase activating protein 32 1 1
MIRT716436 RAB15 RAB15, member RAS oncogene family 1 1
MIRT717465 ADORA3 adenosine A3 receptor 1 1
MIRT720153 PPIP5K2 diphosphoinositol pentakisphosphate kinase 2 1 1
MIRT725130 SYNRG synergin gamma 1 1
MIRT726007 ZNF91 zinc finger protein 91 1 1
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