miRTarBase - #MIRT608074 -
pre-miRNA Information
pre-miRNA hsa-mir-122   
Genomic Coordinates chr18: 58451074 - 58451158
Synonyms MIR122A, MIRN122, MIRN122A, hsa-mir-122, miRNA122, miRNA122A, MIR122
Description Homo sapiens miR-122 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-122-5p
Sequence 15| UGGAGUGUGACAAUGGUGUUUG |36
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 18 + 58451091 29233923 MiREDiBase
C-to-U 11 18 + 58451098 28550310 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1258166649 1 dbSNP
rs1426570658 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles

Circulating MicroRNA Expression Profiling
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZFP14   
Synonyms ZNF531
Description ZFP14 zinc finger protein
Transcript NM_020917   
Expression
Putative miRNA Targets on ZFP14
3'UTR of ZFP14
(miRNA target sites are highlighted)		 
>ZFP14|NM_020917|3'UTR
   1 TAGAAGAAAGCCTTCAAATGTATATGATGTTACAGAACATCAGAAAATTCATTTTTGAGAAAATGTGTTTCATGCTCAAT
  81 TCCAAGCATAATAAATTTTATATTAGAGAAAGAATATGTTGATTTAAAAGCCTTCCAACACCATTTAAACATGGTTTATC
 161 TTCAGCAAATTCCTATGAGAGAATAATGTAATGAATGTAGGAAAATCTTTAGCCTTATCTGTCATTATCTCCCTTTCTCC
 241 ACTTGATTACCAGTTTGATTTATTGGACAAGATACTAAGCTTCTGTGCCTCATTTTGCTGACTTGTAAAATGGTAATAAT
 321 AGTACTTATATGTATTAGTTATTTATTGCTGCGTAATAAATTACCACAGACTTAGTAGCATAAAATAACATATAATTATA
 401 TCTTATAATTTGGATCAGGAGTATAGGCATGACTTAGTTGGGTCCTCTGCTTCAGGGTCTCTTGCAAGGCTACAGATTTC
 481 AGCCAGGGCTGAGGTCTCATCTGAAGGCTCAACTGGGGAAGGATCCACATCCAGACTAACATAGTTGTTACCCAATGTAT
 561 TTCCGTGAGGCCTGTTGCATTGAGATTCTCAGTTTCTAGCTGGCTGTTGGCTGAACGCTGACTGCAGCTCCTGGCCACAA
 641 TAGCCTCATCAACATGGCTGCTTGCTTCATCAAGGCATGCAAGCCAAAAGGGAGGACAGTCTGCTAGCAAGATGGAAGTT
 721 ACCATCTTGTGTAATCTAATCATGGAAGTAACATTCCCTCACCTTCTACTGGTAGAAGTAAGTTACTAGGATAGTCCACA
 801 CTCAAGAGAACGGGATGATACAAGAGTGTGAATAAGTCCTGGAGACAGGACCACTGGGGGGCCTGTTTAGAGTCAGCCTG
 881 CCACACTGTGGAATAGGATTGTTGCAAGGAGTAAGTAGTTAATACTTGGAGGAATCACAGTCATATAGCATGTATTCTGT
 961 AAATATTATCTGTAATTGTTATTATTGTCATTAGTATTAGTGAATTCACGTAAAAGGAAGATCTGTAGACATAATAAATG
1041 TAGAAATGCCTCCTGTCACCTCTCAGAAATTATTAAACATAATTTATTCTAGGTAAAATTTAGATTGTAGTGAATGTAGG
1121 AAGTTCTTCAGCACTTGAGCTGCATTAGAAATTTCATGCCAAAAATGAATTTCATGAATGTGAGGTCACTAGTAATACAG
1201 CTGTTGAAGAATTAGAGGGAAATAGGAAATGATTTTCCCATAATTCCAGAAAGCAAAAGGCTTACAATCCCTGTTGTCTG
1281 ACCACAGTTTAAAATTAATTAGAAACTATCAAAAATGTGGCTTAAAAGAAATTAACCACCTAGGAATTTAATATTGTTGT
1361 GTATATTTATGTGTGTGTATAAAACTCCTGTGGGAAAGAAACAAAACATCATTCTATAAGTCAGTATACTTTTGGATGCT
1441 CAAAATGCCATATCTTCAACCAGTAGGAGTTGTTTCAAGTTGAGTTTTTGATGTGATCCCACCAATAATTTGATAGTTTA
1521 CTTGATTGTGGCTGCATAATTTGGTAACCTATGAAAGATGCTAGAGCACCAATGTATAATTTTTTTGAGACAGGGTGTCA
1601 CTTTGTCCCCCAGGCTGGAGTGCAGTGGTACAAGCACAGTTCACTGTACCCTGTTCCTCCTGGGCTCAAGTGATTCTTCC
1681 ACCTAAATTTTTTTTTTTTTTTTAGAGAAAGGGTCTCACTATGTTGCCCAGGCTGGTCTTGAACTTCTGGGCTCAAGTGA
1761 TCCTCCCTCCTTGGCCTCCAAAGGTGCTGGGGTTACAGGTATGAGCCACCACACCCAGCCCAACTCATTATTCTTGAAAT
1841 CAATAAATCAGAGGAAAAATTGTCATTTAGTTTCCTTTTCCCATGTGAACCAAATTTCAGGGTCACCAGAAGTTCATCAA
1921 ATTCAAATGAATTTGGCCTGGCACAGGGGTCACACCTGTAATCCCAGCACTTTGGGAGGACAAGGTGGGTGGATCACTTG
2001 AGGCCAGGAGTTTGAGACCAACCTGGTTAACATGGTGAAACCCTGTCTGTACTAAAAATACAAAATTTAGCCAGGCATGG
2081 TGGCACACACCTGTAGTCCCAGGCTGAGGTGGGAGGATCACTTGAACCCAAGAGGCAGAGTTTGCAGTGAGCTGAGATCG
2161 TGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGACCCTGTCTCAAAAAAAAAATTTGTTTTTTGAATGGGTTTTTCTTT
2241 TTTGAAGAAGTCTAATAAATCTAGAAGGAATTAGAGGATTAGAAAAATCACCATTTTCTAGACCTTAATGGAATAATGGG
2321 TCCAGAAAACATGATCTTCAATGGGTACTACAACTAATAGGTGAAATATTTTATAGCGAGATTTTTATGGTGGATCTATC
2401 AAACTGGCCACCTCTGAACCCTTTGATCTGTTTTAACCTTAATAAAAATGGGTCTATCAGACAACACACTTCCTGACGTA
2481 ATGCAATAGGAAGTCCACACCACCATCTACAAAGCCTTATTGCTGGAATAATGAACTGAAAGCAGACAGGGACTAGATGA
2561 ACAGTATATGGTCATCCCTTGGTATCCATGGGGAATTGGTTCCAGGATCCTCCACTGATGGTAAAATCTGAGGATGCTCA
2641 AGTCCCTTGTATAAAATGGCATAGTATGTATTTGCATATTACCTACTCACATCTTCCTGTATACTTTAAATTATCTTTAG
2721 ATCACTTATACCTATCACAATGTAAATACTATGTAAATAGTTGTTATACTGTATTTTTCAATTTGCATTATTTTTATTGT
2801 ATTTTATTTTTATTGTTTTTTTTTGAGTATTTTCTATTTGAGATTGGTTGAATCTGCACATATGGAGGGCTGGCTATAAA
2881 GGGCACCACAAGGAAGAAGCCAAACAGATCCAGAATGTGTGAAATTCTACAGAGCAAATTACCTGATTTCTTCAACTAAC
2961 AGGTAGCATGAAAATACAAGGGGAAGGGCAACCATTAACAGATTAAAAGAGACTTAAAGAGACATATCAACTAAATTCAG
3041 TATGTTGGCATTACTTGGACCTGGTTTGAACAAAACATAAAAAGCCATTTTGGAGACAGTGAGGGAAGTGTGGACATGGA
3121 CTAAATATTAAATGATATTTACATATATTAATTTGGTTAGGGATTATGTCAGTGTGATTATAAAAAATAAAAGATCGTAT
3201 GATATGAGATACATACTATGAAATGAAGATAGACACATTTGGATTAAAATATTCTAGCAAAAGAAATAATTGGCAAAGAG
3281 AGCTGGAAACTAAATTGGCAACATGTTGATAATTTAAGTGGAGTGTTTTGTTCATGGAGACTTATTGTTCTAATATTTCT
3361 ACTTTTGTATGTGTTTGAAATTTCAATAATAAAATGTTTAAAATCAAAACCAAAATTATAGACTATGTAGAAATGAATGA
3441 CAGTGAGATGCCTGCACATCTAACCTTGTCAGATATAATCAAAGTTCTGTTCAGTGACAAATTAATGCCCTGTAATGTGG
3521 TAAGGAAATCTTATTTGTGGATACAGTCTTCATCTTCTTCACTTACCCACAGCAGCAACACCAGGCCTGTCACACAGATG
3601 AATGTGTTGAGGGAATGAATAAGTATTTCCGTCAAGAAAAAGGAAACAACAAAATAAAACCAACCCAAGTAAAGAACAGC
3681 CAAGTGGCCAGGTGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCATGGCAGGTGGATCACCTGAGGTCGGG
3761 ATTTTGAGACCAGCCTGACCAACACTGAGAAACCCCATCTCTATTAAAGATACAAAATTAGCCAGGCATGGTGGTGCATG
3841 CCTGTAATCCCAGCTACTTGGGAGGCTAAGGCAGGAGAATCACTTGAATCCAGGAGGCGGAGTTTGTGGTGAGTTGAGAT
3921 CGCGCCACTGCACTCCAGCCTGGGTAACAGAGCAAGAGTCTGTCAAAAAAAAAAAAAAAAAAAAAGGAACAGCCAAGTAA
4001 CAGTAGAAAGTAGAAATTAAGAGAATGGAGAATATTAGACTTGATTCAATGTTAATAGTGATTAGATTTTGGCAGTTATA
4081 ATCAAGGAAGAGAAAATGAAAGATAATACATTTAGAGTATTAATGATGATAAAAGAGACACAACTCTAGATTATATCAAG
4161 CAGATTTTTAAAATTATAAGGCAAAACTAGGCCGGGCACAGTGGCTCACACCTGTAACCCCAGCACTTTGGGAGGCCGAG
4241 GTGGGTGGATCACTTGAAGTCAGGAGTTCGAGACCAGCCTGACCAACATAGCAAAACCCCATCTCTACTAAAAATACAAA
4321 AATTAGCCTGTCATGGTGGCGGGCACCTGTAATCTAAGCTACTGGGGAGCCTGAGGCAGGAGAATTGCTTGAACCCAGGA
4401 GGCAGAGGTTGCGGTGAACCAAGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGAACCTGTCTCAAAAATAAT
4481 AAACATAATATGGTAAAACTATACATGCACACATGCACAAACGTGTATATTCATTCCAGTACAAGTAAAAATGTAGGATT
4561 GCATTTTTCCCCCAAAAGGAATATGTTTTACAATTAACTCACCGTATAACCCAAATAGATTAACAAAAAATGTGTGTGTG
4641 TGTGTGTGTGTGTGAACTCCCTGTTTAAAAAATCTGATACTTATAAAAACTTTAAGGAATAGATAATCCTAAAGATTTTA
4721 CCAATTAATTCTGCAAGGTAAAATAATCCTAATAAAAATTAGATGAAGATAGTTTCTGAAAGCAAATTCTAGACCACCTT
4801 CATTATGAAGATTCTATTTTTCACAATTCTAAATAAAGTTTATTTAGAATTTATTACAAAATCTATCTTTGCTAATAGGT
4881 CAGTGTTTCTTTTCCCAAGCACCAAATACCTCCAGAAAGCCTGTGTTTGACCCCTAAATTCAACATTCTCCAGAAGTTTG
4961 CTTCAAGGAATATTAATTCTCGATGGTATTTGAAAAAAAGATTTCTTGGGAAAATAGGCAAATGAAGCAAAACATAAAAC
5041 ATCTACTTTTGGCCAGGCACGGTGGCTCACGCCTGTAATCCCAACATTTTGGGAGGCCAAGGCGAGCAGATCACTTGAGG
5121 TCAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAATACAAAATTAGCTGGGCGTGGTGGC
5201 TTGCACCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCAGGAAATGGAGATTGCAGTGAGCT
5281 GAGATTTTGCCATTGCACTCCAACCTGGGCAACAAGAGTGAAACTCAGTCTCAAATAAAATAAAATAAAAATCTACTTTT
5361 GAGGAATTCAAAGTATACATGATCAGTTTGCCAAAGATTTAGTAAAGACATTTTTATTTAACTGAGTGTATCTCAAATTT
5441 ATTGTGGAATTCTCAGTCCGAATATCTGGAATAGGAACAGCTTTGTTAGATGCTACCATAACCACAATGAATGTCTTCAA
5521 GGGTGTAATTTTAGATATGGTGAGTGGTTGTGTTGGGGGCGGCATAAGTCAGGGCAATTTTTTGCAGCTCATATCATGCT
5601 CTGAAAGTAGCTACCTGCTTTAATGGATGGTTAGTGCTTTTCTATAGAATGGAAAAGATTCCAGCCCGATCCTTGATATG
5681 TTTGTGTTAAACATGCTTATATATTATATTAAACAATGATTAAGGACATAAATGAGTTTCTGTGGTAATAAAGATGCTAT
5761 ATTGAATATCAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions (Predicted by miRanda)
IDDuplex structurePositionScoreMFE
1 
miRNA  3' guuUGUGGUAACAGUGUGAGGu 5'
             ||:||| |   :|||||| 
Target 5' atcACGCCACT---GCACTCCa 3'
 		4424 - 4442 140.00 -18.10
2 
miRNA  3' guuuGUGGUAACAGUGUGAGGu 5'
              ::|||||   :|||||| 
Target 5' atttTGCCATT---GCACTCCa 3'
 		5284 - 5302 139.00 -17.50
3 
miRNA  3' guuugUGGUA---ACAGUGUGAGGu 5'
               |:|||    || |||:||| 
Target 5' atctaATCATGGAAGTAACATTCCc 3'
 		734 - 758 137.00 -11.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN27005670 25 COSMIC
COSN30165408 26 COSMIC
COSN31525721 46 COSMIC
COSN30471119 50 COSMIC
COSN30505335 77 COSMIC
COSN31566918 93 COSMIC
COSN31573297 94 COSMIC
COSN27725453 134 COSMIC
COSN29371798 240 COSMIC
COSN21937403 352 COSMIC
COSN22886116 643 COSMIC
COSN19057405 802 COSMIC
COSN17182067 874 COSMIC
COSN1767306 994 COSMIC
COSN24294798 1009 COSMIC
COSN2482470 1028 COSMIC
COSN21388351 1237 COSMIC
COSN6143494 1679 COSMIC
COSN24532454 1983 COSMIC
COSN16220652 2188 COSMIC
COSN21116648 2250 COSMIC
COSN31640513 2723 COSMIC
COSN9226445 2870 COSMIC
COSN9356338 3005 COSMIC
COSN8259983 3220 COSMIC
COSN20115764 3424 COSMIC
COSN8259982 3700 COSMIC
COSN21305520 3799 COSMIC
COSN26546334 4051 COSMIC
COSN5760223 4123 COSMIC
COSN17182063 4196 COSMIC
COSN29905446 4631 COSMIC
COSN21657298 4708 COSMIC
COSN29512949 4822 COSMIC
COSN21094231 4992 COSMIC
COSN21204649 4997 COSMIC
COSN6668456 5130 COSMIC
COSN31961549 5159 COSMIC
COSN8259981 5192 COSMIC
COSN14541073 5381 COSMIC
COSN15055028 5504 COSMIC
COSN14541516 5534 COSMIC
COSN17204297 5544 COSMIC
COSN25233543 5669 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1438208247 1 dbSNP
rs1408731006 2 dbSNP
rs1048205568 3 dbSNP
rs1455897261 6 dbSNP
rs1380145979 19 dbSNP
rs1184685725 20 dbSNP
rs759749961 22 dbSNP
rs1238659717 23 dbSNP
rs185869114 24 dbSNP
rs1432906382 26 dbSNP
rs754605450 30 dbSNP
rs562613394 34 dbSNP
rs924947446 39 dbSNP
rs1241949352 44 dbSNP
rs767035104 46 dbSNP
rs909085313 49 dbSNP
rs1207721942 52 dbSNP
rs1469956294 52 dbSNP
rs573746301 63 dbSNP
rs968017539 69 dbSNP
rs982568009 77 dbSNP
rs1295904014 78 dbSNP
rs1245593465 91 dbSNP
rs949489671 93 dbSNP
rs751434436 95 dbSNP
rs764078433 106 dbSNP
rs752396384 110 dbSNP
rs1320461425 112 dbSNP
rs1403811840 132 dbSNP
rs1158224196 143 dbSNP
rs1408920491 151 dbSNP
rs990850431 151 dbSNP
rs958258468 164 dbSNP
rs1164273894 165 dbSNP
rs1001582113 168 dbSNP
rs1032983188 174 dbSNP
rs1441052621 175 dbSNP
rs555282591 185 dbSNP
rs1348418247 188 dbSNP
rs1238002952 191 dbSNP
rs1279804100 214 dbSNP
rs10419508 221 dbSNP
rs1004907060 224 dbSNP
rs1030500697 229 dbSNP
rs1242340342 237 dbSNP
rs1194966514 239 dbSNP
rs998340843 240 dbSNP
rs372101945 242 dbSNP
rs933114943 251 dbSNP
rs900337544 253 dbSNP
rs1267615308 263 dbSNP
rs752723059 273 dbSNP
rs1364703966 276 dbSNP
rs1006533080 280 dbSNP
rs1161663290 288 dbSNP
rs180878505 289 dbSNP
rs936397192 292 dbSNP
rs1362248614 315 dbSNP
rs1048757891 316 dbSNP
rs1368592430 330 dbSNP
rs929914311 334 dbSNP
rs978150749 337 dbSNP
rs1445448335 342 dbSNP
rs945077604 342 dbSNP
rs1313833811 347 dbSNP
rs1340586923 348 dbSNP
rs73602365 352 dbSNP
rs539072891 353 dbSNP
rs1338056993 374 dbSNP
rs1195706768 377 dbSNP
rs960165009 392 dbSNP
rs1034473232 393 dbSNP
rs200829117 396 dbSNP
rs59781209 401 dbSNP
rs75308843 401 dbSNP
rs200562546 402 dbSNP
rs949437470 408 dbSNP
rs1185543454 410 dbSNP
rs142777499 413 dbSNP
rs1461474344 416 dbSNP
rs1168423991 421 dbSNP
rs916691177 423 dbSNP
rs1398370323 428 dbSNP
rs1412484609 433 dbSNP
rs1335697788 444 dbSNP
rs550414850 450 dbSNP
rs1383014643 457 dbSNP
rs1454215620 459 dbSNP
rs1294824873 463 dbSNP
rs138187618 464 dbSNP
rs534159574 470 dbSNP
rs990922216 473 dbSNP
rs1227422129 476 dbSNP
rs936628163 477 dbSNP
rs1005263207 478 dbSNP
rs925316318 482 dbSNP
rs886460317 488 dbSNP
rs1262881142 489 dbSNP
rs567797645 493 dbSNP
rs1030211784 494 dbSNP
rs571646638 499 dbSNP
rs117042114 507 dbSNP
rs534378191 508 dbSNP
rs967025542 509 dbSNP
rs1169406629 512 dbSNP
rs560604869 518 dbSNP
rs923426179 523 dbSNP
rs1175487944 526 dbSNP
rs1479275075 534 dbSNP
rs371056391 542 dbSNP
rs976249996 543 dbSNP
rs900452119 546 dbSNP
rs1383639902 550 dbSNP
rs13346636 555 dbSNP
rs1017953556 557 dbSNP
rs1006606295 564 dbSNP
rs1042159483 565 dbSNP
rs944999927 572 dbSNP
rs917599232 577 dbSNP
rs1324713550 578 dbSNP
rs1438880937 580 dbSNP
rs991820664 590 dbSNP
rs952446256 591 dbSNP
rs1485596808 592 dbSNP
rs1026692294 597 dbSNP
rs994485209 610 dbSNP
rs1275606098 611 dbSNP
rs927574062 616 dbSNP
rs533333842 617 dbSNP
rs562759476 628 dbSNP
rs1013401758 641 dbSNP
rs1156537403 644 dbSNP
rs1362823333 653 dbSNP
rs1453973045 655 dbSNP
rs894993639 661 dbSNP
rs983556573 665 dbSNP
rs1055181430 674 dbSNP
rs936742267 680 dbSNP
rs925272381 703 dbSNP
rs1305169583 708 dbSNP
rs776194471 712 dbSNP
rs1030327782 715 dbSNP
rs997556175 716 dbSNP
rs1262622729 730 dbSNP
rs964611147 739 dbSNP
rs1017547229 754 dbSNP
rs766048084 757 dbSNP
rs1001086311 766 dbSNP
rs1490788909 771 dbSNP
rs1175307297 772 dbSNP
rs544455930 779 dbSNP
rs767718874 784 dbSNP
rs73928793 786 dbSNP
rs923569040 792 dbSNP
rs1160838978 793 dbSNP
rs1042496580 796 dbSNP
rs1297665406 799 dbSNP
rs561544328 800 dbSNP
rs1163528005 801 dbSNP
rs1366688814 806 dbSNP
rs1407259324 810 dbSNP
rs1009310797 811 dbSNP
rs976320358 812 dbSNP
rs1392250730 817 dbSNP
rs1330672992 826 dbSNP
rs1357385077 829 dbSNP
rs964818502 836 dbSNP
rs1056039410 837 dbSNP
rs1292551936 842 dbSNP
rs1467985816 845 dbSNP
rs937706514 846 dbSNP
rs984587818 855 dbSNP
rs927520065 861 dbSNP
rs1480800175 865 dbSNP
rs1044645783 866 dbSNP
rs770952860 873 dbSNP
rs1176796378 875 dbSNP
rs910726976 884 dbSNP
rs1183709603 885 dbSNP
rs1481206854 888 dbSNP
rs1405230100 905 dbSNP
rs942153328 909 dbSNP
rs909387566 911 dbSNP
rs1462761289 914 dbSNP
rs774675944 914 dbSNP
rs1380909387 916 dbSNP
rs1452163129 925 dbSNP
rs950826068 931 dbSNP
rs540078884 981 dbSNP
rs923371729 985 dbSNP
rs1212745907 993 dbSNP
rs1235060024 994 dbSNP
rs1307884626 994 dbSNP
rs769102814 1009 dbSNP
rs35822095 1010 dbSNP
rs1461095740 1012 dbSNP
rs993875182 1031 dbSNP
rs1205874960 1033 dbSNP
rs113837726 1034 dbSNP
rs141598486 1046 dbSNP
rs1185298707 1053 dbSNP
rs1419363734 1056 dbSNP
rs968404345 1058 dbSNP
rs1224369495 1072 dbSNP
rs1373985939 1089 dbSNP
rs1173339115 1098 dbSNP
rs1013517921 1101 dbSNP
rs189866616 1102 dbSNP
rs1009839152 1104 dbSNP
rs896228323 1119 dbSNP
rs1428668295 1130 dbSNP
rs1269558291 1131 dbSNP
rs556683794 1135 dbSNP
rs1055003562 1144 dbSNP
rs1405158318 1147 dbSNP
rs1281204513 1159 dbSNP
rs1056153483 1165 dbSNP
rs532762385 1166 dbSNP
rs1000942432 1168 dbSNP
rs538525422 1173 dbSNP
rs4806322 1174 dbSNP
rs904870710 1175 dbSNP
rs1444799827 1178 dbSNP
rs1042762450 1179 dbSNP
rs945371509 1184 dbSNP
rs1343035931 1185 dbSNP
rs1242171256 1188 dbSNP
rs1157765975 1196 dbSNP
rs1419086784 1200 dbSNP
rs769704764 1203 dbSNP
rs1480283424 1209 dbSNP
rs1045009227 1220 dbSNP
rs1040567918 1223 dbSNP
rs943624525 1232 dbSNP
rs1427482274 1240 dbSNP
rs1399142503 1241 dbSNP
rs1317779994 1252 dbSNP
rs1182358559 1256 dbSNP
rs910713872 1260 dbSNP
rs1301142362 1268 dbSNP
rs1444545139 1272 dbSNP
rs984954593 1283 dbSNP
rs567903404 1288 dbSNP
rs909492751 1301 dbSNP
rs919664887 1303 dbSNP
rs1185776986 1307 dbSNP
rs1485033081 1310 dbSNP
rs1260313025 1321 dbSNP
rs1284427523 1340 dbSNP
rs1318130848 1341 dbSNP
rs1219457778 1349 dbSNP
rs1047870508 1354 dbSNP
rs1216596501 1359 dbSNP
rs1490298577 1362 dbSNP
rs1200655695 1365 dbSNP
rs549580625 1367 dbSNP
rs972907578 1379 dbSNP
rs1289670481 1387 dbSNP
rs745965983 1392 dbSNP
rs1024649501 1402 dbSNP
rs992074993 1403 dbSNP
rs758125580 1406 dbSNP
rs1421529986 1414 dbSNP
rs959309122 1415 dbSNP
rs148376485 1416 dbSNP
rs1000729282 1420 dbSNP
rs921820621 1424 dbSNP
rs143357865 1426 dbSNP
rs1359451494 1428 dbSNP
rs1287854724 1429 dbSNP
rs1441034357 1435 dbSNP
rs964675955 1439 dbSNP
rs1378508190 1444 dbSNP
rs1021007521 1450 dbSNP
rs551867600 1454 dbSNP
rs1346510186 1463 dbSNP
rs1010072501 1464 dbSNP
rs1359415273 1467 dbSNP
rs1223859747 1470 dbSNP
rs1292551087 1479 dbSNP
rs1436362392 1503 dbSNP
rs1161106171 1512 dbSNP
rs73041864 1514 dbSNP
rs1386359301 1521 dbSNP
rs1384674135 1526 dbSNP
rs778777321 1528 dbSNP
rs1425297859 1543 dbSNP
rs563640289 1544 dbSNP
rs1040388792 1549 dbSNP
rs1394086725 1551 dbSNP
rs1409108068 1552 dbSNP
rs1329168979 1560 dbSNP
rs1402074992 1563 dbSNP
rs747286434 1566 dbSNP
rs117021224 1570 dbSNP
rs1261462871 1571 dbSNP
rs1246165587 1573 dbSNP
rs1286408619 1574 dbSNP
rs1337878657 1585 dbSNP
rs1049322958 1597 dbSNP
rs930799372 1605 dbSNP
rs919428310 1607 dbSNP
rs550746474 1608 dbSNP
rs1202007427 1614 dbSNP
rs1242614396 1620 dbSNP
rs1486958194 1622 dbSNP
rs972471211 1630 dbSNP
rs187025490 1631 dbSNP
rs373795496 1633 dbSNP
rs1358666604 1639 dbSNP
rs1467967238 1641 dbSNP
rs1292330640 1655 dbSNP
rs79064740 1669 dbSNP
rs959256955 1670 dbSNP
rs12974973 1676 dbSNP
rs1397218352 1680 dbSNP
rs1019931182 1681 dbSNP
rs979768937 1687 dbSNP
rs1227311651 1688 dbSNP
rs1279308209 1693 dbSNP
rs1320368969 1696 dbSNP
rs967871814 1701 dbSNP
rs1221925155 1702 dbSNP
rs1016597563 1704 dbSNP
rs1193801822 1704 dbSNP
rs1436236913 1704 dbSNP
rs1483640235 1704 dbSNP
rs748422706 1704 dbSNP
rs1425510341 1708 dbSNP
rs1021208399 1709 dbSNP
rs888021215 1711 dbSNP
rs1175288049 1713 dbSNP
rs563948595 1721 dbSNP
rs1363600179 1726 dbSNP
rs1383600171 1733 dbSNP
rs1300782234 1741 dbSNP
rs901966113 1746 dbSNP
rs1299283003 1749 dbSNP
rs902020565 1759 dbSNP
rs1403453836 1764 dbSNP
rs1283011656 1766 dbSNP
rs1313052247 1769 dbSNP
rs1018885249 1773 dbSNP
rs868844544 1781 dbSNP
rs1259105063 1784 dbSNP
rs1349960328 1788 dbSNP
rs1217258518 1793 dbSNP
rs1265180210 1794 dbSNP
rs10412082 1801 dbSNP
rs1489807263 1809 dbSNP
rs1007493562 1824 dbSNP
rs182464362 1836 dbSNP
rs1434602096 1843 dbSNP
rs1156411352 1851 dbSNP
rs1049281796 1854 dbSNP
rs943434103 1857 dbSNP
rs752110996 1860 dbSNP
rs1159818410 1875 dbSNP
rs930894889 1876 dbSNP
rs1423269651 1883 dbSNP
rs1302989651 1886 dbSNP
rs979446075 1890 dbSNP
rs1388744707 1894 dbSNP
rs1460905811 1895 dbSNP
rs946722160 1899 dbSNP
rs1335265303 1907 dbSNP
rs1240910087 1909 dbSNP
rs1288214547 1921 dbSNP
rs1357251431 1929 dbSNP
rs1221636450 1942 dbSNP
rs1265878517 1944 dbSNP
rs1489307284 1951 dbSNP
rs913794292 1955 dbSNP
rs897991907 1956 dbSNP
rs988019639 1963 dbSNP
rs960491589 1966 dbSNP
rs1443402312 1971 dbSNP
rs1163427443 1983 dbSNP
rs1036973395 1985 dbSNP
rs980611569 1992 dbSNP
rs939737731 1994 dbSNP
rs917696135 1995 dbSNP
rs1296696601 2007 dbSNP
rs1396091835 2010 dbSNP
rs190490392 2013 dbSNP
rs937631774 2016 dbSNP
rs1490513835 2018 dbSNP
rs1245170774 2021 dbSNP
rs1313282754 2023 dbSNP
rs1323319189 2025 dbSNP
rs1202234321 2026 dbSNP
rs1250531438 2039 dbSNP
rs1005195426 2045 dbSNP
rs185210918 2050 dbSNP
rs926282385 2052 dbSNP
rs1211631094 2058 dbSNP
rs578109189 2069 dbSNP
rs1181809306 2071 dbSNP
rs979332070 2078 dbSNP
rs1415106167 2091 dbSNP
rs1479606475 2091 dbSNP
rs1250592125 2092 dbSNP
rs1227840518 2096 dbSNP
rs1319585667 2098 dbSNP
rs1423337076 2108 dbSNP
rs1280910379 2110 dbSNP
rs1466397668 2119 dbSNP
rs1333533076 2132 dbSNP
rs968407658 2137 dbSNP
rs1451954542 2140 dbSNP
rs1303471784 2142 dbSNP
rs913723901 2143 dbSNP
rs1212725732 2151 dbSNP
rs2967503 2152 dbSNP
rs1026533723 2154 dbSNP
rs993743142 2157 dbSNP
rs540858338 2159 dbSNP
rs1460508714 2160 dbSNP
rs147802163 2161 dbSNP
rs1299120049 2162 dbSNP
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rs1484558062 2172 dbSNP
rs1185283341 2182 dbSNP
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rs1478325465 2188 dbSNP
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rs889179203 2191 dbSNP
rs1007606420 2196 dbSNP
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rs1297446240 2215 dbSNP
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rs1213842171 5535 dbSNP
rs1441384926 5538 dbSNP
rs745414188 5546 dbSNP
rs35603769 5548 dbSNP
rs1190567083 5552 dbSNP
rs1251124226 5556 dbSNP
rs1383139223 5559 dbSNP
rs1194029343 5560 dbSNP
rs971221546 5560 dbSNP
rs1398615507 5561 dbSNP
rs187001991 5564 dbSNP
rs1345387378 5565 dbSNP
rs1442608914 5569 dbSNP
rs991653832 5571 dbSNP
rs958515092 5588 dbSNP
rs1440733015 5593 dbSNP
rs1257691414 5594 dbSNP
rs1304649374 5607 dbSNP
rs994535158 5610 dbSNP
rs1202800529 5614 dbSNP
rs1283882152 5620 dbSNP
rs150684088 5634 dbSNP
rs1287288722 5637 dbSNP
rs1015872601 5649 dbSNP
rs1242948819 5652 dbSNP
rs541081705 5657 dbSNP
rs577317515 5667 dbSNP
rs2857 5668 dbSNP
rs144016763 5676 dbSNP
rs1342448126 5680 dbSNP
rs1176391719 5682 dbSNP
rs1029652837 5684 dbSNP
rs997096472 5688 dbSNP
rs1473366640 5691 dbSNP
rs1162177808 5693 dbSNP
rs997340276 5695 dbSNP
rs899940595 5696 dbSNP
rs1352094456 5700 dbSNP
rs1054848365 5706 dbSNP
rs1279329485 5712 dbSNP
rs1351339265 5717 dbSNP
rs1230397071 5720 dbSNP
rs1291539576 5722 dbSNP
rs1334201318 5730 dbSNP
rs1233942453 5740 dbSNP
rs936014149 5742 dbSNP
rs924506202 5748 dbSNP
rs1041617166 5750 dbSNP
rs900107709 5754 dbSNP
rs917060672 5757 dbSNP
rs1185290078 5764 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions BT474
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1395167. RNA binding protein: AGO. Condition:BT474 AGO HITS-CLIP Replicate 2 ...

- Pillai MM; Gillen AE; Yamamoto TM; Kline E; et al., 2014, Breast cancer research and treatment.

miRNA-target interactions (Provided by authors)
IDDuplex structurePosition
1 
miRNA  3' guuUGUGGUAACAGUGUGAGGu 5'
             ||:||| |   :|||||| 
Target 5' aucACGCCACU---GCACUCCa 3'
 		16 - 34
Article - Pillai MM; Gillen AE; Yamamoto TM; Kline E; et al.
- Breast cancer research and treatment, 2014
miRNAs regulate the expression of genes in both normal physiology and disease. While miRNAs have been demonstrated to play a pivotal role in aspects of cancer biology, these reports have generally focused on the regulation of single genes. Such single-gene approaches have significant limitations, relying on miRNA expression levels and heuristic predictions of mRNA-binding sites. This results in only circumstantial evidence of miRNA-target interaction and typically leads to large numbers of false positive predictions. Here, we used a genome-wide approach (high-throughput sequencing of RNA isolated by crosslinking immunoprecipitation, HITS-CLIP) to define direct miRNA-mRNA interactions in three breast cancer subtypes (estrogen receptor positive, Her2 amplified, and triple negative). Focusing on steroid receptor signaling, we identified two novel regulators of the ER pathway (miR-9-5p and miR-193a/b-3p), which together target multiple genes involved in ER signaling. Moreover, this approach enabled the definition of miR-9-5p as a global regulator of steroid receptor signaling in breast cancer. We show that miRNA targets and networks defined by HITS-CLIP under physiologic conditions are predictive of patient outcomes and provide global insight into miRNA regulation in breast cancer.
LinkOut: [PMID: 24906430]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Cardiac Tissues
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM2202479. RNA binding protein: AGO2. Condition:S4_LV_29yo_Male_AGO2_bound_RNA ...

- Spengler RM; Zhang X; Cheng C; McLendon JM; et al., 2016, Nucleic acids research.

miRNA-target interactions (Provided by authors)
IDDuplex structurePosition
1 
miRNA  3' guuuGUGGUAACAGUGUGAGGu 5'
              ::||| |   :|||||| 
Target 5' ----UGCCACU---GCACUCCa 3'
 		1 - 15
Article - Spengler RM; Zhang X; Cheng C; McLendon JM; et al.
- Nucleic acids research, 2016
MicroRNAs (miRs) have emerged as key biological effectors in human health and disease. These small noncoding RNAs are incorporated into Argonaute (Ago) proteins, where they direct post-transcriptional gene silencing via base-pairing with target transcripts. Although miRs have become intriguing biological entities and attractive therapeutic targets, the translational impacts of miR research remain limited by a paucity of empirical miR targeting data, particularly in human primary tissues. Here, to improve our understanding of the diverse roles miRs play in cardiovascular function and disease, we applied high-throughput methods to globally profile miR:target interactions in human heart tissues. We deciphered Ago2:RNA interactions using crosslinking immunoprecipitation coupled with high-throughput sequencing (HITS-CLIP) to generate the first transcriptome-wide map of miR targeting events in human myocardium, detecting 4000 cardiac Ago2 binding sites across >2200 target transcripts. Our initial exploration of this interactome revealed an abundance of miR target sites in gene coding regions, including several sites pointing to new miR-29 functions in regulating cardiomyocyte calcium, growth and metabolism. Also, we uncovered several clinically-relevant interactions involving common genetic variants that alter miR targeting events in cardiomyopathy-associated genes. Overall, these data provide a critical resource for bolstering translational miR research in heart, and likely beyond.
LinkOut: [PMID: 27418678]
CLIP-seq Support 1 for dataset GSM1395167
Method / RBP HITS-CLIP / AGO
Cell line / Condition BT474 / BT474 AGO HITS-CLIP Replicate 2
Location of target site ENST00000270001.7 | 3UTR | UUGCGGUGAACCAAGAUCACGCCACUGCACUCCAGCCUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 24906430 / GSE57855
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE42095 Differentiated embryonic stem cells 0.748 2.0e-5 0.767 9.8e-6 23 Click to see details
GSE28544 Breast cancer 0.398 2.7e-2 0.368 3.8e-2 24 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.309 6.6e-2 0.305 6.9e-2 25 Click to see details
GSE21687 Ependynoma primary tumors 0.178 8.0e-2 0.235 3.1e-2 64 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.181 1.9e-1 -0.256 1.1e-1 25 Click to see details
GSE19350 CNS germ cell tumors -0.199 2.7e-1 0.063 4.2e-1 12 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.292 2.9e-1 0.257 3.1e-1 6 Click to see details
GSE28260 Renal cortex and medulla 0.15 3.1e-1 0.082 3.9e-1 13 Click to see details
GSE32688 Pancreatic cancer -0.068 3.6e-1 -0.061 3.7e-1 32 Click to see details
GSE21849 B cell lymphoma -0.053 3.9e-1 0.235 1.1e-1 29 Click to see details
GSE14794 Lymphoblastoid cells -0.023 4.1e-1 -0.101 1.7e-1 90 Click to see details
GSE17306 Multiple myeloma 0.029 4.2e-1 0.205 7.9e-2 49 Click to see details
GSE26953 Aortic valvular endothelial cells -0.031 4.4e-1 0.089 3.4e-1 24 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.03 4.5e-1 0.195 2.1e-1 20 Click to see details
GSE27834 Pluripotent stem cells -0.03 4.6e-1 -0.085 3.8e-1 16 Click to see details
GSE38226 Liver fibrosis -0.011 4.8e-1 0.173 2.3e-1 21 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
STAD -0.908 0 -0.881 0 8 Click to see details
LIHC -0.364 0.01 -0.404 0 49 Click to see details
KICH -0.583 0.06 -0.548 0.08 8 Click to see details
HNSC 0.908 0.14 0.500 0.33 3 Click to see details
KIRP -0.235 0.27 -0.350 0.18 9 Click to see details
KIRC 0.086 0.33 0.075 0.35 29 Click to see details
THCA 0.249 0.34 -0.100 0.44 5 Click to see details
CHOL 0.147 0.35 0.283 0.23 9 Click to see details
ESCA -0.018 0.49 -0.100 0.44 5 Click to see details
ESCA -0.018 0.49 -0.100 0.44 5 Click to see details
ESCA -0.018 0.49 -0.100 0.44 5 Click to see details
ESCA -0.018 0.49 -0.100 0.44 5 Click to see details
ESCA -0.018 0.49 -0.100 0.44 5 Click to see details
ESCA -0.018 0.49 -0.100 0.44 5 Click to see details
MiRNA Regulatory Network:
Functional analysis:
Strong evidence (reporter assay, western blot, qRT-PCR or qPCR) Other evidence
Transcription factor regulation Circular RNA sponge
539 hsa-miR-122-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000012 CYP7A1 cytochrome P450 family 7 subfamily A member 1 3 1
MIRT000364 IGF1R insulin like growth factor 1 receptor 4 3
MIRT000365 SRF serum response factor 4 1
MIRT000663 RAC1 Rac family small GTPase 1 5 2
MIRT000717 RHOA ras homolog family member A 2 2
MIRT003006 CCNG1 cyclin G1 4 4
MIRT003079 GTF2B general transcription factor IIB 2 1
MIRT003080 GYS1 glycogen synthase 1 4 2
MIRT003081 ANK2 ankyrin 2 3 1
MIRT003082 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 3 1
MIRT003083 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 4 2
MIRT003084 ANXA11 annexin A11 4 2
MIRT003085 ALDOA aldolase, fructose-bisphosphate A 3 2
MIRT003086 RAB6B RAB6B, member RAS oncogene family 3 1
MIRT003087 RAB11FIP1 RAB11 family interacting protein 1 5 3
MIRT003088 FOXP1 forkhead box P1 3 1
MIRT003089 MECP2 methyl-CpG binding protein 2 3 2
MIRT003090 NCAM1 neural cell adhesion molecule 1 4 3
MIRT003091 UBAP2 ubiquitin associated protein 2 3 1
MIRT003092 TBX19 T-box 19 3 1
MIRT003093 AACS acetoacetyl-CoA synthetase 3 1
MIRT003094 DUSP2 dual specificity phosphatase 2 3 1
MIRT003095 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 3 1
MIRT003097 MAPK11 mitogen-activated protein kinase 11 3 1
MIRT003098 FUNDC2 FUN14 domain containing 2 3 1
MIRT003099 AKT3 AKT serine/threonine kinase 3 3 3
MIRT003100 TPD52L2 tumor protein D52 like 2 4 3
MIRT003102 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 4 2
MIRT003103 G6PC3 glucose-6-phosphatase catalytic subunit 3 4 2
MIRT003104 AP3M2 adaptor related protein complex 3 mu 2 subunit 3 1
MIRT003105 SLC7A1 solute carrier family 7 member 1 4 4
MIRT003106 XPO6 exportin 6 3 1
MIRT003107 FOXJ3 forkhead box J3 3 1
MIRT003108 SLC7A11 solute carrier family 7 member 11 3 1
MIRT003109 TRIB1 tribbles pseudokinase 1 3 1
MIRT003110 EGLN3 egl-9 family hypoxia inducible factor 3 3 1
MIRT003111 NUMBL NUMB like, endocytic adaptor protein 3 1
MIRT003112 ADAM17 ADAM metallopeptidase domain 17 3 5
MIRT003727 DSTYK dual serine/threonine and tyrosine protein kinase 3 2
MIRT003728 FAM117B family with sequence similarity 117 member B 3 1
MIRT004364 BCL2L2 BCL2 like 2 4 2
MIRT004527 PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 2 1
MIRT004879 ADAM10 ADAM metallopeptidase domain 10 5 1
MIRT005782 ACVR1C activin A receptor type 1C 1 1
MIRT006123 PRKRA protein activator of interferon induced protein kinase EIF2AK2 4 1
MIRT006421 WNT1 Wnt family member 1 3 1
MIRT007007 PTPN1 protein tyrosine phosphatase, non-receptor type 1 1 1
MIRT007081 NT5C3A 5'-nucleotidase, cytosolic IIIA 1 1
MIRT007082 P4HA1 prolyl 4-hydroxylase subunit alpha 1 1 1
MIRT007083 ZNF395 zinc finger protein 395 1 1
MIRT007084 SOCS1 suppressor of cytokine signaling 1 1 1
MIRT023217 SSR3 signal sequence receptor subunit 3 1 1
MIRT023218 PHOX2A paired like homeobox 2a 1 1
MIRT023219 DZIP1L DAZ interacting zinc finger protein 1 like 1 1
MIRT023220 GSTM2 glutathione S-transferase mu 2 1 1
MIRT023221 RAI14 retinoic acid induced 14 1 1
MIRT023222 STARD13 StAR related lipid transfer domain containing 13 1 1
MIRT023223 CNN3 calponin 3 1 1
MIRT023224 A2M alpha-2-macroglobulin 1 1
MIRT023225 EFCAB6 EF-hand calcium binding domain 6 1 1
MIRT023226 GLOD4 glyoxalase domain containing 4 1 1
MIRT023227 CALR calreticulin 1 1
MIRT023228 POFUT1 protein O-fucosyltransferase 1 1 1
MIRT023229 PYGO1 pygopus family PHD finger 1 1 1
MIRT023230 CDY2B chromodomain Y-linked 2B 1 1
MIRT023231 CDC42EP3 CDC42 effector protein 3 1 1
MIRT023232 CS citrate synthase 3 3
MIRT023233 RNF170 ring finger protein 170 3 3
MIRT023234 GTF3C6 general transcription factor IIIC subunit 6 1 1
MIRT023235 ZNF321P zinc finger protein 321, pseudogene 1 1
MIRT023236 LAMP1 lysosomal associated membrane protein 1 1 1
MIRT023237 SLC52A2 solute carrier family 52 member 2 1 1
MIRT023238 ZNF658 zinc finger protein 658 1 1
MIRT023239 ATP13A3 ATPase 13A3 1 1
MIRT023240 CPNE5 copine 5 1 1
MIRT023241 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT023242 TMEM136 transmembrane protein 136 1 1
MIRT023243 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT023244 TMEM74 transmembrane protein 74 1 1
MIRT023245 ANKRD10 ankyrin repeat domain 10 1 1
MIRT023246 TBL1XR1 transducin beta like 1 X-linked receptor 1 1 1
MIRT023247 USP10 ubiquitin specific peptidase 10 1 1
MIRT023248 AKAP11 A-kinase anchoring protein 11 1 1
MIRT023249 BACH2 BTB domain and CNC homolog 2 1 1
MIRT023250 HCCS holocytochrome c synthase 1 1
MIRT023251 Slc7a1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 1 1
MIRT023252 GTDC2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1 1
MIRT023253 CTPS1 CTP synthase 1 1 1
MIRT023254 SLC44A1 solute carrier family 44 member 1 1 1
MIRT023255 CLSPN claspin 1 1
MIRT023256 RABGEF1 RAB guanine nucleotide exchange factor 1 1 1
MIRT023257 FBXO7 F-box protein 7 1 1
MIRT023258 NCDN neurochondrin 1 1
MIRT023259 SOX2 SRY-box 2 1 1
MIRT023260 ZNF618 zinc finger protein 618 1 1
MIRT023261 ABLIM1 actin binding LIM protein 1 1 1
MIRT023262 ZBTB4 zinc finger and BTB domain containing 4 1 1
MIRT023263 LUZP1 leucine zipper protein 1 1 1
MIRT023264 NLGN3 neuroligin 3 1 1
MIRT023265 PRR11 proline rich 11 1 1
MIRT023266 HHAT hedgehog acyltransferase 1 1
MIRT023267 UBE2L3 ubiquitin conjugating enzyme E2 L3 1 1
MIRT023268 DNAJC18 DnaJ heat shock protein family (Hsp40) member C18 1 1
MIRT023269 FAM102A family with sequence similarity 102 member A 1 1
MIRT023270 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 1
MIRT023271 DENND2C DENN domain containing 2C 1 1
MIRT023272 HMOX1 heme oxygenase 1 3 2
MIRT023273 USP28 ubiquitin specific peptidase 28 1 1
MIRT023274 KRT18 keratin 18 1 1
MIRT023275 BPGM bisphosphoglycerate mutase 1 1
MIRT023276 ZNF233 zinc finger protein 233 1 1
MIRT023277 SLC25A30 solute carrier family 25 member 30 1 1
MIRT023278 ANKRD9 ankyrin repeat domain 9 3 3
MIRT023279 RLN1 relaxin 1 1 1
MIRT023280 DDIT3 DNA damage inducible transcript 3 1 1
MIRT023281 TRIM65 tripartite motif containing 65 1 1
MIRT023282 B4GALT1 beta-1,4-galactosyltransferase 1 1 1
MIRT023283 ANXA7 annexin A7 1 1
MIRT023284 SLC19A2 solute carrier family 19 member 2 1 1
MIRT023285 MARCKS myristoylated alanine rich protein kinase C substrate 1 1
MIRT023286 CLEC11A C-type lectin domain containing 11A 1 1
MIRT023287 CENPF centromere protein F 1 1
MIRT023288 CLDN18 claudin 18 1 1
MIRT023289 PFDN1 prefoldin subunit 1 1 1
MIRT023290 SPAG9 sperm associated antigen 9 1 1
MIRT023291 CEACAM8 carcinoembryonic antigen related cell adhesion molecule 8 1 1
MIRT023292 KRT10 keratin 10 1 1
MIRT023293 SET SET nuclear proto-oncogene 1 1
MIRT023294 SLC11A2 solute carrier family 11 member 2 1 1
MIRT023295 MYCBP MYC binding protein 3 3
MIRT023296 GPHB5 glycoprotein hormone beta 5 1 1
MIRT023297 STAU2 staufen double-stranded RNA binding protein 2 1 1
MIRT023298 NFATC1 nuclear factor of activated T-cells 1 1 1
MIRT023299 ERP29 endoplasmic reticulum protein 29 1 1
MIRT023300 MEP1A meprin A subunit alpha 1 1
MIRT023301 SPTLC1 serine palmitoyltransferase long chain base subunit 1 1 1
MIRT023302 GTF2H2 general transcription factor IIH subunit 2 1 1
MIRT023303 C14orf39 chromosome 14 open reading frame 39 1 1
MIRT023304 UBE2K ubiquitin conjugating enzyme E2 K 1 1
MIRT023305 PPP1R9B protein phosphatase 1 regulatory subunit 9B 1 1
MIRT023306 PSMD10 proteasome 26S subunit, non-ATPase 10 1 1
MIRT023307 CALD1 caldesmon 1 1 1
MIRT023308 TTYH3 tweety family member 3 1 1
MIRT023309 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 1 1
MIRT023310 SCN4B sodium voltage-gated channel beta subunit 4 1 1
MIRT023311 C1orf122 chromosome 1 open reading frame 122 1 1
MIRT023312 PAK1 p21 (RAC1) activated kinase 1 1 1
MIRT023313 DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 1 1
MIRT023314 DMXL1 Dmx like 1 1 1
MIRT023315 ZNF160 zinc finger protein 160 1 1
MIRT023316 CSRP1 cysteine and glycine rich protein 1 1 1
MIRT023317 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT023318 RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit 1 1
MIRT023319 ANKRD13C ankyrin repeat domain 13C 1 1
MIRT023320 SUCLA2 succinate-CoA ligase ADP-forming beta subunit 1 1
MIRT023321 PEA15 phosphoprotein enriched in astrocytes 15 1 1
MIRT023322 MTPN myotrophin 1 1
MIRT023323 YKT6 YKT6 v-SNARE homolog 1 1
MIRT023324 MOB3B MOB kinase activator 3B 1 1
MIRT023325 FAM118A family with sequence similarity 118 member A 1 1
MIRT023326 ZNF264 zinc finger protein 264 1 1
MIRT023327 HECTD3 HECT domain E3 ubiquitin protein ligase 3 1 1
MIRT023328 BATF2 basic leucine zipper ATF-like transcription factor 2 1 1
MIRT023329 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 1 1
MIRT023330 MAPRE1 microtubule associated protein RP/EB family member 1 1 1
MIRT023331 TBC1D22B TBC1 domain family member 22B 1 1
MIRT023332 SLC9A1 solute carrier family 9 member A1 3 3
MIRT023333 NPEPPS aminopeptidase puromycin sensitive 1 1
MIRT023334 BCL2L1 BCL2 like 1 2 1
MIRT023335 OSMR oncostatin M receptor 1 1
MIRT023336 CALU calumenin 1 1
MIRT023337 BRI3BP BRI3 binding protein 1 1
MIRT023338 PSPH phosphoserine phosphatase 1 1
MIRT023339 APMAP adipocyte plasma membrane associated protein 1 1
MIRT023340 WASF1 WAS protein family member 1 1 1
MIRT023341 LCA5 LCA5, lebercilin 1 1
MIRT023342 NODAL nodal growth differentiation factor 1 1
MIRT023343 CASP7 caspase 7 1 1
MIRT023344 CPA3 carboxypeptidase A3 1 1
MIRT023345 PALM paralemmin 1 1
MIRT023346 TCP11 t-complex 11 1 1
MIRT023347 NALCN sodium leak channel, non-selective 1 1
MIRT023348 PLAGL2 PLAG1 like zinc finger 2 1 1
MIRT023349 IDS iduronate 2-sulfatase 3 3
MIRT023350 PARP11 poly(ADP-ribose) polymerase family member 11 1 1
MIRT023351 MAZ MYC associated zinc finger protein 1 1
MIRT023352 CPNE4 copine 4 1 1
MIRT023353 FAM19A3 family with sequence similarity 19 member A3, C-C motif chemokine like 1 1
MIRT023354 KRT14 keratin 14 1 1
MIRT023355 DYNC1H1 dynein cytoplasmic 1 heavy chain 1 1 1
MIRT023356 GNL3L G protein nucleolar 3 like 1 1
MIRT023357 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 1 1
MIRT023358 EYA4 EYA transcriptional coactivator and phosphatase 4 1 1
MIRT023359 GNPDA2 glucosamine-6-phosphate deaminase 2 1 1
MIRT023360 BRCA2 BRCA2, DNA repair associated 1 1
MIRT023361 ZSCAN4 zinc finger and SCAN domain containing 4 1 1
MIRT023362 HSPA5 heat shock protein family A (Hsp70) member 5 1 1
MIRT023363 SERAC1 serine active site containing 1 1 1
MIRT023364 SLC15A2 solute carrier family 15 member 2 1 1
MIRT023365 RABIF RAB interacting factor 1 1
MIRT023366 ART3 ADP-ribosyltransferase 3 1 1
MIRT023367 EP400 E1A binding protein p400 1 1
MIRT023368 MT4 metallothionein 4 1 1
MIRT023369 TRAM2 translocation associated membrane protein 2 1 1
MIRT023370 PHPT1 phosphohistidine phosphatase 1 1 1
MIRT023371 KIAA0101 PCNA clamp associated factor 1 1
MIRT023372 VHL von Hippel-Lindau tumor suppressor 1 1
MIRT023373 IFNA1 interferon alpha 1 1 1
MIRT023374 FSTL3 follistatin like 3 1 1
MIRT023375 PHF14 PHD finger protein 14 1 1
MIRT023376 ZCCHC2 zinc finger CCHC-type containing 2 1 1
MIRT023377 GSTM3 glutathione S-transferase mu 3 1 1
MIRT023378 DCTN5 dynactin subunit 5 1 1
MIRT023379 CHST3 carbohydrate sulfotransferase 3 1 1
MIRT023380 HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 1 1
MIRT023381 ADO 2-aminoethanethiol dioxygenase 1 1
MIRT023382 POMZP3 POM121 and ZP3 fusion 1 1
MIRT023383 CHST12 carbohydrate sulfotransferase 12 1 1
MIRT023384 ARSB arylsulfatase B 1 1
MIRT023385 ATP7A ATPase copper transporting alpha 1 1
MIRT023386 PMP22 peripheral myelin protein 22 1 1
MIRT023387 TGFBRAP1 transforming growth factor beta receptor associated protein 1 1 1
MIRT023388 ORC2 origin recognition complex subunit 2 1 1
MIRT023389 CREB1 cAMP responsive element binding protein 1 1 1
MIRT023390 CD83 CD83 molecule 1 1
MIRT023391 TOB2 transducer of ERBB2, 2 3 5
MIRT023392 LRP11 LDL receptor related protein 11 1 1
MIRT023393 MPV17 MPV17, mitochondrial inner membrane protein 1 1
MIRT023394 TRIM29 tripartite motif containing 29 1 1
MIRT023395 OSBP2 oxysterol binding protein 2 1 1
MIRT023396 PKM pyruvate kinase, muscle 6 4
MIRT023397 FOXK2 forkhead box K2 3 3
MIRT023398 CLIC4 chloride intracellular channel 4 5 6
MIRT023399 ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 1 1
MIRT023400 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 1 1
MIRT023401 LMNB2 lamin B2 3 5
MIRT023402 BAX BCL2 associated X, apoptosis regulator 2 2
MIRT023403 CDK4 cyclin dependent kinase 4 3 3
MIRT054362 Cux1 cut-like homeobox 1 1 1
MIRT074336 TNRC6A trinucleotide repeat containing 6A