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miRTarBase - #MIRT664468 -
pre-miRNA Information
pre-miRNA hsa-mir-122   
Genomic Coordinates chr18: 58451074 - 58451158
Synonyms MIR122A, MIRN122, MIRN122A, hsa-mir-122, miRNA122, miRNA122A, MIR122
Description Homo sapiens miR-122 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-122-5p
Sequence 15| UGGAGUGUGACAAUGGUGUUUG |36
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 18 + 58451091 29233923 MiREDiBase
C-to-U 11 18 + 58451098 28550310 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1258166649 1 dbSNP
rs1426570658 6 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles

Circulating MicroRNA Expression Profiling
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZYG11B   
Synonyms ZYG11
Description zyg-11 family member B, cell cycle regulator
Transcript NM_024646   
Expression
Putative miRNA Targets on ZYG11B
3'UTR of ZYG11B
(miRNA target sites are highlighted)		 
>ZYG11B|NM_024646|3'UTR
   1 TAGCCATAAGTATTGGATAGTTGAATCACAGGAATCCTTTTTGTGATTGGTCCATTTGGAATATCTTACCCTCCCTGATG
  81 TTTTGGGGGTTTCTATGACAAGAGTCATAAAATCAGTTTGGGATTGATAATGTGTAGTACTGCCCATGTGAACAGTCTCT
 161 AATTTGTCTTGTGATTTTAAACTTATGAGTCAAGAAGGGTCTCTTCCTTTATCATTGCCTTTTAGGAAATTTTCCACATC
 241 TTTCAGTGTTTGAACTTACTTGTGCTTGAGATTCTACAGTTTTATGGTAAAGTTTGCACGAACCCTTAGGCCAGACTTTT
 321 CTGATCTCAGAGTCCCTTCCAATCAATTTGCAGCTTCACATAAGCTGTTGACCTGATTTCTGACACTGCTTCAGTTGTAA
 401 ATTTTATACTGCTTCTGTATAAAATGCCTTTCTTCTCTATCTGTGTATATTTTATAAGATGTCCTTCTTAGTGTGAAAGA
 481 AGGGAAATGTGGATCATCTTGTGGAAGCTAATCACTGGCAGGAGCCTGGATGGCTGGCGGAAAGATATATGAGAAAGAAA
 561 AATTATGAAGGTAGAACAGAGTGTAGGAACTGGGAATTGGTTTCATGGTATAGGTTTTAAAATGAGACAGGCTACCCTTC
 641 GGGAGTCCACCTCTCTTGAGGCGGTGAGCAGAAGCTTGTCCTCCATATTTATACCTAGAAGTGTGGACTGCTGGTTCCTG
 721 CACAGACTGCCGGTTATTCACTAGGAATATTTCCCCAAGCACCACAGTATAAAATACTACAGCACTCTGTGTTAAAGACT
 801 AACTGTCTACATCTCCATATGTTGTAGTGTTGTGAAAATGTGATTTTAAAAAATTATCGCCAGTTAAAACTGGCTATTCT
 881 TTTCCTCTATTTCAAAGTCATTTTTGTTCAGTGGAATAGAGACAGCAACATGGTGTTAACCTCTCAATTAAAATACAATT
 961 GACACCAGTAAATTTTGCCATAAAAAGTTAAAATCTCTTGTTCAAAATATGTGTATCTTCTTAATGTGTTCATGTTAGAG
1041 AAAGTGTCCCCATCTCACTGCCAAAAATGAAAGAAAATAATTAAACTCTTTAAATGATTAAATGTAATGATTCTACTCGC
1121 AGTGCATAACAGCACATATTTTTGACAGATTATTTTTTAGGCAATTACCTTTCCTTAAGGTATCTGATACAGTATAGTAA
1201 AGAATCACTTATATCAGTAATAGCACTTGAGAGATAGCAAGTCACCAAGAAACTTAATTTTCATTTAAAATTTTATTTTG
1281 TGAATAAGGTCAATCTACAATCCCAGATAACTACATTTTTTTTCATAGATGGCCAGTGTTTTCAACAGAGATTTAAAATG
1361 GAATATTAAAATTATAGTGATTATTCAGAAGCATTTTAATTTAGAAAGGAGCTGGTTTGTTAGTTCACTGATGACATTTT
1441 TTGACAAACATTTTATACCATTATCACAATAATCAGACTTGAATTTTTTTTGGAGTTCCTTCATGTGAATGAAAACTGAG
1521 TTAAAAGAAAGTAGGCATTTAGGTCTGGATGCAGTGGCTCATGCTTGTAATCCCAGCACTTTGGGAAGCTGAAGCAGGAG
1601 GATTGCTTGAGCCCAGAAGTTCAAGACTAGCCTGGGCAACATAGTGAGACTCGGTCTCTACCAAAAAAAAAAATTTTTTT
1681 TTTTTAAATTAGCTGGGTGTGGTGGCACCTGGGAAACAGAGCGAGACGCTGACTCAAATAAATATCTAAATAGATATTTA
1761 GAATCACTGAAAACCATATTAAATGCTGGGTTAATGCTGACTTAATTGGCTTAAGGAATTTTTATAGGCGTAAGATAAAT
1841 TTTCACAGACTAAGTTTATTTCAGACAAAATAGAGAATTCTTTTAAAAGTTTTTTTTTTTTTTTTCCTTTTTCGAATGTT
1921 AATGTCTAAGACAAAGTTCAGAAAACGAGATGGCCTGTGGTAGTTTGGAAATTGCTAGATATGTTGACCGTTTCCAGGTC
2001 TTTTATCTAGTGTAGTTAAGGGAAAGCCTATTTAAGAAGTTTGGCTTCAAGTTTCTGTTTTATAAGACAAAAGTGCATAT
2081 TTCTTTACAGGCTAATGCTAGGTTTTTGTCTTTACAAATTATTTTCAGAAATGGCTAAAAGTGTACAGAAAACAGTAAAT
2161 CCCTTCTTTACTCAGAATAACTTCTTAATAGTTGAAGCATCCAAAATATGTAAAAGCAAGGGTGGGCGTAGTGGCTCTTG
2241 CCTGTAATCCCAGCATTCTGGGAGGCCGAGGCGGGCAGATCACTTGAGATCAGGAGTTCGAGACCACCCTGGCCAACGTG
2321 GTGAAACCCCGTCTCTACTAAAAATACAAAAACTAGCTGGGCATGGTGGCTTTTTTGCACGCCTATAGTCCCAGCTACTC
2401 GGGAGGCTGAGGCACGAGAATCACTTGAACCCAGGAAGTGGAGGTTGCAGTGAGCTAAGATCGTGCCACTGCACTCCAGC
2481 CTGGACAACGGAGTGAGACTCTGGGGAAAAAAAAAATTAAACTTCCTACTTTTTTTCTTTTTGTAGAGACAGAGTTTCAC
2561 TCTGTCGCCCAAGCTGGAGTGCAGTGGCACAATCATACCTCACTGCAGCCTCTTGGGCTTATGTGATCTTACCCCCTCAG
2641 CCTCTGGAGTAGCTGGAACTACAGGCTAAATTTCCTACTTTGTAAACATCAGTAGTGGCCAGATACTTCTGAGTCTTAAA
2721 AGCATAATAGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACAAGGTCA
2801 GGAGTTCAAGACCAGCCTGGCCCAAATGGTGAAACCCTGTCTCTACTAAATATACAAAAATTAGCTGGGTGTGGTGGCGG
2881 GCACCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGTGGTGAGCCAA
2961 TATCATGCCACTGCACTCCAGCCTGGGTGACAGAGTAAGACTCCGTCTCAAAAAAAAAAAAAGCATAATAATTTATTACA
3041 TCCCAAATATATAAAAATTTGAGTGCCTTTGCAGTTGGGATGGTTCCTAAAATTGCGTATAGAATTAAGGCACAGAATTG
3121 TGTGTAAGGTCCTGAATCTGGCTAAAATACAGTGGATGTATGTATTGGAATTATGAGGCATAAGTAGCCAGTATCTATAG
3201 TTAGAATCTACAAGGCCTCCTTTTTGCACCTGTAGACTAGAATATAACTGTTATTGGTGCCTTTGAGTGTTATCTCTCAG
3281 TGGCTAGAGGTGCTGTTTCAAGCACAATTTAGACTAGGGTTGAACCACTCATTGTTCAAATCATTGGTGGGCTCCAATGT
3361 AAAATATCACTACATCAGTCCACAAGCAACATTAAGGAAATCTAAAGGAAATGGAATTTGACTTTTTAGAGTATAATGAT
3441 GTTCTAGGGCATAATGAGGAAAATTTTTAAAAAATAGATTATAATGATACATATTGGTATCATTAAGACAACAGATTTGA
3521 GCAAATACAATTAAGGTGTCTTATTTTTTGCATCAAGTAATTATTGCTGTGGTCTTTCTACTCCACAAAATAATTTTTTC
3601 TTTTTGCAGTTGAAAATTAACTGCATTATTAACTAATTAATAAAATAAATCAAGTGGTATAAGGGATTAGTTTACCCTCA
3681 AGCCGATGACTCCATGGCTACTGATATTAGTTAGTTTAGGATTTTTAAAAAGCATATCAGACCCCCAGTTTCAGGAATTG
3761 AGTATAAATATTGCTTCTTGTCACCCTGGGACAGTAATGCCTTATAGTGGCACTAGTCACCTTAAGTAGATTACACATGG
3841 TTGAGGTGAATAAAGCTGCATGGGAATTTGCTTTCGTGATATATTTCATTTGCAAACTTCTACATAATCAAGTTTTATGT
3921 TTAAAACCATCGGTTCTATATATCTAGCTTTAGGAAGTTGCCCTTACAGGTGGGACCTTTTGTGTTAATCTGTTTTCTCC
4001 CCAGTCATCTTATTTGGCTATGTTAAAAAAAAAAAAAAAAAAAAAGCGAGAGAGAGAGATGGTGTCTCACTGTGTTGCCC
4081 AGGCTGGTCTCGAACTCCTGGCCTCAAGTGACTTTCCCACCTCAGCTTCCCAAAGTGCTGGAATCACAGGCATGAGCCAC
4161 AGTGCCTGGTCTTAGCTGTGTTTTTAATTATGCCATGCATCAACATAACACCGGGCCATCTTCCTATCCCTTCCTATCCC
4241 ATATGTTTAATGAAAACATATTTTATGTGCTAAATTAGGTTAATTTACCAGAGATTTAGCTTAGTGTTTTTAAACTATAG
4321 AACAATACCCCTATAGAACAATGTACAGCTGCACCCAAGGTTAAAAAGAGGTAGCAGGGAAAACAAACTTAAACTCTTTG
4401 TATATGGTGAAACCCATCCCTCTCCTGCCCTCTAATGGTATGTTTACATTATTTCGTTATTATACAATGTAGTGGTATAA
4481 ACAGTATTATTAAACTGAAGGCATAAGTTAAAGGAAGTATGTTACTTTGAGCTGATGTAGGCTCTTCCACTTTTATCTGT
4561 ATTTTACTTATTTGGGGACTTTGTATTGCTAGGGCTTCAGAATACTAACTTTGACACAGCTCCCAGAGAGGTTTGCAAAC
4641 TTTTGGTTTCCCTCTCAAATCCATGGTAGTAGTTTCAAATGAGTTTGTGGATAATGGATGTTTAGTCCTTATCATTTGCT
4721 GTGTTTTGACAGTTTTTAATTTGCAGTATTCACTCACGAACTGTTTTATTTTAGGAATAATGCAAAACCAACCTTCGTCC
4801 GGTGATGAGAATAGCCGTATGATAAGAGAATTTGCTCATCGTGCTTTAAATGATTAACTGTTTTACCTTATTTAGTATTT
4881 CATAGACTTTGCATGATATGGTACACTCCTAATTATGCATTCTTTGGTTTCCAAATCTTAATCTAAGATACTTTGTTAAC
4961 TGACTGGTAGCCTAAGAAAGAGACTTTTCTTCCTGTTTTTCTCTCTCCCCATTTTTTGGGGTAAGTTTTGCAAAGATCAG
5041 TGCTGCTTCTCATGACTCTAAAGTAAAGCTCTTTTGGATAGCACAGCCTAACTTTACAGCTAGACAGAATGGCCATTAAG
5121 AATATTTCCAAAATCCAAGTTTATCAAAATTATTTTGTGGGAAATCATCAATCTATTTTATTAATGTTATGTGTTTAATT
5201 TTGGACTTATTTTGGGAAAAACTGTTCAAATTGGGTCCTTTTAAGCTTATTTTAAGCAGCCTAGAAGGAAGAAGCTACTT
5281 AGCTAATGAAAGCTGAGACACTTTATTAAAAGCAGGATCTTAAGAGCATTGTTTTTCCTTAAAAACTTTATACTCTCAGA
5361 TAATCTGCAACAACAAAAATTAAGAAATCCCTGACTTTTGTAGAATTCCCACTGTCAAATTCTCACTGACTTATGAGTGT
5441 GAGAGAAGTTATCTTTTGTTTGAATTCTGATAGAACAGTTTAACTCCTTTCTAAGGATATAAAAAATTCATTGGAAAGTG
5521 TGTATATTTCAAAGACTCTCAATTATCTGGACTGAAGGCACTGTTCTCACTATGGCCAGATGAATGGGAGTATTCTGTAC
5601 ATGAATCATGCTGTATTTTAAATCAGGACATCACTTAAGTATTAATGTTGTGTGTACAGATTTTTGTTTTGGGATTTTTT
5681 TTGCCTAAATAAATGTTATAAATTTTATGTAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions (Predicted by miRanda)
IDDuplex structurePositionScoreMFE
1 
miRNA  3' guuUGUGGUA-ACAGUGUGAGGu 5'
             :||: || || :||||||| 
Target 5' tttGCATGATATGGTACACTCCt 3'
 		4888 - 4910 159.00 -15.50
2 
miRNA  3' guUUGUGGUAACAG---UGUGAGGu 5'
            ||:|:|| || |   :|||||| 
Target 5' ccAATATCA-TGCCACTGCACTCCa 3'
 		2957 - 2980 143.00 -17.00
3 
miRNA  3' guUUGUGGU---AACAGUGU-GAGGu 5'
            ||:||:|   ||| |||| |||| 
Target 5' agAATACTAACTTTGACACAGCTCCc 3'
 		4599 - 4624 140.00 -14.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30519762 4 COSMIC
COSN26506377 32 COSMIC
COSN1105674 55 COSMIC
COSN31491928 58 COSMIC
COSN31587189 60 COSMIC
COSN30188177 88 COSMIC
COSN29461043 116 COSMIC
COSN8473715 613 COSMIC
COSN15819497 710 COSMIC
COSN4750862 843 COSMIC
COSN1448867 863 COSMIC
COSN26294285 1195 COSMIC
COSN20094828 1674 COSMIC
COSN7223499 1675 COSMIC
COSN20094829 1906 COSMIC
COSN27434418 1906 COSMIC
COSN7223500 2078 COSMIC
COSN18884619 2203 COSMIC
COSN17183261 2332 COSMIC
COSN31960243 2371 COSMIC
COSN25913323 2491 COSMIC
COSN16361277 2617 COSMIC
COSN22183952 3568 COSMIC
COSN5373352 3716 COSMIC
COSN6459614 4250 COSMIC
COSN1448868 4285 COSMIC
COSN16696927 4444 COSMIC
COSN24936891 4664 COSMIC
COSN22825863 4740 COSMIC
COSN6038605 5199 COSMIC
COSN6459616 5307 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs183602283 5 dbSNP
rs773578959 7 dbSNP
rs1163160464 10 dbSNP
rs1460401903 13 dbSNP
rs761137031 14 dbSNP
rs1420661687 17 dbSNP
rs1187981926 24 dbSNP
rs763549743 31 dbSNP
rs34490646 33 dbSNP
rs766880027 33 dbSNP
rs766771140 46 dbSNP
rs745781411 47 dbSNP
rs775207094 47 dbSNP
rs762543804 50 dbSNP
rs1163120789 55 dbSNP
rs1391359428 57 dbSNP
rs943555999 62 dbSNP
rs1431965375 64 dbSNP
rs1336772839 78 dbSNP
rs756248424 80 dbSNP
rs1273752945 84 dbSNP
rs955706245 89 dbSNP
rs1167077685 92 dbSNP
rs1370374198 97 dbSNP
rs1009801357 107 dbSNP
rs1022560047 110 dbSNP
rs968234307 125 dbSNP
rs1268602329 133 dbSNP
rs902078034 135 dbSNP
rs780485784 137 dbSNP
rs1336463348 139 dbSNP
rs1338716452 140 dbSNP
rs926708423 141 dbSNP
rs961103655 143 dbSNP
rs1439179889 148 dbSNP
rs992215169 156 dbSNP
rs1344251950 157 dbSNP
rs531866169 163 dbSNP
rs188241809 164 dbSNP
rs114256017 165 dbSNP
rs535460854 174 dbSNP
rs1038217392 190 dbSNP
rs1348399701 202 dbSNP
rs1201761875 205 dbSNP
rs1299612624 208 dbSNP
rs1191450942 212 dbSNP
rs191880641 214 dbSNP
rs1441294401 224 dbSNP
rs142228334 225 dbSNP
rs539309244 227 dbSNP
rs1306967604 232 dbSNP
rs890867480 239 dbSNP
rs1216410670 245 dbSNP
rs765908333 245 dbSNP
rs1389928781 254 dbSNP
rs1274511486 255 dbSNP
rs961305670 259 dbSNP
rs1466887184 278 dbSNP
rs1373699643 280 dbSNP
rs1174466866 284 dbSNP
rs1446772249 286 dbSNP
rs1352258117 292 dbSNP
rs1330233525 293 dbSNP
rs562741228 300 dbSNP
rs1413927938 316 dbSNP
rs768381680 318 dbSNP
rs1321272145 327 dbSNP
rs1367488476 329 dbSNP
rs533263592 343 dbSNP
rs575796802 345 dbSNP
rs919569011 355 dbSNP
rs543538729 378 dbSNP
rs1395507257 379 dbSNP
rs1177914358 381 dbSNP
rs555147684 384 dbSNP
rs774144212 386 dbSNP
rs1234546695 391 dbSNP
rs891430389 396 dbSNP
rs1296804311 398 dbSNP
rs1206659466 403 dbSNP
rs1438499423 407 dbSNP
rs12080630 410 dbSNP
rs1209056683 412 dbSNP
rs1350487797 419 dbSNP
rs1304712667 420 dbSNP
rs1022548849 427 dbSNP
rs1272667674 435 dbSNP
rs1343827129 436 dbSNP
rs1371735837 436 dbSNP
rs985141030 440 dbSNP
rs1442247370 442 dbSNP
rs1358112919 447 dbSNP
rs910963658 448 dbSNP
rs1209011562 466 dbSNP
rs1436259914 476 dbSNP
rs1375831986 478 dbSNP
rs1157769885 479 dbSNP
rs1417108095 480 dbSNP
rs943822263 486 dbSNP
rs1177754334 489 dbSNP
rs540657060 491 dbSNP
rs1256975192 492 dbSNP
rs902024592 494 dbSNP
rs1002361922 498 dbSNP
rs1281322085 509 dbSNP
rs146401127 517 dbSNP
rs1286918546 523 dbSNP
rs866504006 525 dbSNP
rs1000861239 526 dbSNP
rs113169976 527 dbSNP
rs908641238 539 dbSNP
rs961351665 540 dbSNP
rs1330814131 541 dbSNP
rs760249010 546 dbSNP
rs765843659 552 dbSNP
rs974084298 559 dbSNP
rs1159729442 567 dbSNP
rs1404762368 570 dbSNP
rs182526652 571 dbSNP
rs564688945 594 dbSNP
rs1185825890 597 dbSNP
rs531927625 605 dbSNP
rs1258441169 610 dbSNP
rs932590088 615 dbSNP
rs1485084483 629 dbSNP
rs1244247324 631 dbSNP
rs550277045 637 dbSNP
rs961520372 638 dbSNP
rs972583638 641 dbSNP
rs1334966428 649 dbSNP
rs912362566 651 dbSNP
rs1455716683 654 dbSNP
rs943857789 656 dbSNP
rs1052822998 663 dbSNP
rs79245914 664 dbSNP
rs1289164776 675 dbSNP
rs947015105 687 dbSNP
rs116301767 695 dbSNP
rs985086550 696 dbSNP
rs139354429 698 dbSNP
rs910910410 700 dbSNP
rs1330374147 707 dbSNP
rs1169987823 712 dbSNP
rs1002844345 724 dbSNP
rs1421919262 730 dbSNP
rs12081849 732 dbSNP
rs896612363 733 dbSNP
rs539362477 734 dbSNP
rs375666272 743 dbSNP
rs1015629245 760 dbSNP
rs1216154633 766 dbSNP
rs45581033 767 dbSNP
rs1250338223 768 dbSNP
rs1224618792 770 dbSNP
rs1308837364 772 dbSNP
rs1295881263 775 dbSNP
rs1233239815 781 dbSNP
rs1368563140 783 dbSNP
rs1260598430 789 dbSNP
rs187318553 790 dbSNP
rs746481628 798 dbSNP
rs1220969415 806 dbSNP
rs1391540058 811 dbSNP
rs925523584 814 dbSNP
rs1212191324 820 dbSNP
rs1374952189 826 dbSNP
rs936931346 831 dbSNP
rs1454091032 833 dbSNP
rs1055119752 856 dbSNP
rs974032022 859 dbSNP
rs764400098 860 dbSNP
rs1250455333 877 dbSNP
rs1193524232 880 dbSNP
rs895150893 884 dbSNP
rs1013646166 889 dbSNP
rs954091513 892 dbSNP
rs1345449081 893 dbSNP
rs896951038 907 dbSNP
rs1414505919 909 dbSNP
rs1335036717 911 dbSNP
rs536848674 916 dbSNP
rs1389714460 923 dbSNP
rs1026812837 936 dbSNP
rs1158496498 938 dbSNP
rs1048058 939 dbSNP
rs1459379421 947 dbSNP
rs1373877645 954 dbSNP
rs144339712 959 dbSNP
rs1389671250 966 dbSNP
rs56392930 977 dbSNP
rs1309421694 996 dbSNP
rs1420327935 1006 dbSNP
rs1250682120 1007 dbSNP
rs1348265668 1009 dbSNP
rs1484447198 1013 dbSNP
rs1282038978 1016 dbSNP
rs769490236 1016 dbSNP
rs534664518 1018 dbSNP
rs1258873133 1037 dbSNP
rs1241170110 1038 dbSNP
rs768196339 1047 dbSNP
rs965420890 1048 dbSNP
rs1414264338 1049 dbSNP
rs912970623 1051 dbSNP
rs1353746432 1055 dbSNP
rs947090088 1057 dbSNP
rs912966055 1061 dbSNP
rs750961050 1063 dbSNP
rs1157321998 1066 dbSNP
rs905486315 1074 dbSNP
rs191413738 1086 dbSNP
rs1055776488 1089 dbSNP
rs573108055 1092 dbSNP
rs1163507478 1099 dbSNP
rs756299234 1119 dbSNP
rs896781976 1120 dbSNP
rs1055804049 1125 dbSNP
rs916545629 1127 dbSNP
rs1359123039 1135 dbSNP
rs1446202512 1138 dbSNP
rs949421004 1145 dbSNP
rs1206679076 1147 dbSNP
rs1351244737 1149 dbSNP
rs1046425615 1153 dbSNP
rs1013689041 1154 dbSNP
rs897240961 1166 dbSNP
rs1332823064 1168 dbSNP
rs577679005 1174 dbSNP
rs1176912508 1178 dbSNP
rs1295323812 1185 dbSNP
rs1256942703 1191 dbSNP
rs1326201528 1200 dbSNP
rs1316591278 1201 dbSNP
rs540129208 1203 dbSNP
rs1015743941 1209 dbSNP
rs1384288841 1213 dbSNP
rs1389954554 1220 dbSNP
rs1325861692 1236 dbSNP
rs994234017 1246 dbSNP
rs897343889 1248 dbSNP
rs1419466299 1264 dbSNP
rs1425646482 1269 dbSNP
rs1474838896 1274 dbSNP
rs1048189218 1281 dbSNP
rs1371001425 1283 dbSNP
rs780157334 1290 dbSNP
rs1195006339 1292 dbSNP
rs1465209363 1301 dbSNP
rs1252265130 1308 dbSNP
rs888300939 1312 dbSNP
rs1006770392 1315 dbSNP
rs1018618481 1316 dbSNP
rs1275194560 1316 dbSNP
rs1338917688 1319 dbSNP
rs546556525 1330 dbSNP
rs1268658470 1342 dbSNP
rs1162515818 1345 dbSNP
rs1366423857 1347 dbSNP
rs1027075499 1349 dbSNP
rs564750577 1361 dbSNP
rs965358639 1378 dbSNP
rs1439426418 1379 dbSNP
rs998258853 1385 dbSNP
rs1323579520 1389 dbSNP
rs1408890033 1407 dbSNP
rs1393824543 1408 dbSNP
rs1019972026 1411 dbSNP
rs1169330836 1413 dbSNP
rs954151268 1420 dbSNP
rs967106485 1426 dbSNP
rs183884128 1429 dbSNP
rs148627264 1437 dbSNP
rs1032488582 1444 dbSNP
rs1455477289 1446 dbSNP
rs1019928255 1468 dbSNP
rs1408833107 1469 dbSNP
rs1437348182 1471 dbSNP
rs965315968 1482 dbSNP
rs988737686 1483 dbSNP
rs1303125365 1484 dbSNP
rs1343315562 1484 dbSNP
rs1380625621 1506 dbSNP
rs1373771850 1516 dbSNP
rs1275998157 1529 dbSNP
rs913032633 1535 dbSNP
rs1311146117 1565 dbSNP
rs1382667660 1567 dbSNP
rs562269336 1568 dbSNP
rs1048112 1570 dbSNP
rs1171455809 1573 dbSNP
rs916808326 1574 dbSNP
rs947222852 1577 dbSNP
rs1340559927 1581 dbSNP
rs982500941 1583 dbSNP
rs978890173 1584 dbSNP
rs188981807 1587 dbSNP
rs1184446462 1596 dbSNP
rs1129807 1597 dbSNP
rs1279908179 1603 dbSNP
rs927093774 1607 dbSNP
rs1314353258 1617 dbSNP
rs3177646 1624 dbSNP
rs1279927508 1637 dbSNP
rs1223775809 1638 dbSNP
rs936984419 1642 dbSNP
rs77332181 1643 dbSNP
rs559354490 1653 dbSNP
rs942522778 1654 dbSNP
rs1354373107 1656 dbSNP
rs1310726407 1658 dbSNP
rs1039579726 1659 dbSNP
rs1398813208 1663 dbSNP
rs199878820 1663 dbSNP
rs901067561 1663 dbSNP
rs1257044150 1674 dbSNP
rs34249507 1674 dbSNP
rs918160530 1674 dbSNP
rs77742320 1675 dbSNP
rs1037247006 1680 dbSNP
rs897304712 1686 dbSNP
rs995701384 1687 dbSNP
rs1315587946 1693 dbSNP
rs1228429120 1704 dbSNP
rs1333570040 1708 dbSNP
rs567912665 1715 dbSNP
rs1388073935 1725 dbSNP
rs889899185 1726 dbSNP
rs1007297485 1728 dbSNP
rs1032769923 1729 dbSNP
rs1019594284 1733 dbSNP
rs1428411112 1736 dbSNP
rs538548796 1737 dbSNP
rs958515266 1740 dbSNP
rs1176286308 1747 dbSNP
rs1360562236 1748 dbSNP
rs965375816 1751 dbSNP
rs1417320577 1755 dbSNP
rs1464274839 1756 dbSNP
rs1163052075 1757 dbSNP
rs72895452 1763 dbSNP
rs1388822562 1767 dbSNP
rs1414812469 1775 dbSNP
rs193029286 1778 dbSNP
rs982405399 1784 dbSNP
rs17107414 1795 dbSNP
rs929988903 1805 dbSNP
rs550098268 1816 dbSNP
rs1214379055 1830 dbSNP
rs185766736 1831 dbSNP
rs1270798111 1837 dbSNP
rs909968535 1839 dbSNP
rs1314138185 1851 dbSNP
rs1321899288 1864 dbSNP
rs1208332394 1866 dbSNP
rs1262583795 1867 dbSNP
rs1465444789 1871 dbSNP
rs758410113 1876 dbSNP
rs1298229051 1884 dbSNP
rs1440168937 1885 dbSNP
rs1392204137 1886 dbSNP
rs1210448426 1889 dbSNP
rs1039931489 1890 dbSNP
rs1170057384 1890 dbSNP
rs1350641984 1890 dbSNP
rs546178877 1890 dbSNP
rs879095966 1890 dbSNP
rs79416985 1892 dbSNP
rs1189768792 1894 dbSNP
rs1454176712 1895 dbSNP
rs1474933007 1897 dbSNP
rs1191534914 1906 dbSNP
rs933877424 1906 dbSNP
rs1449178201 1907 dbSNP
rs200985165 1908 dbSNP
rs80047585 1914 dbSNP
rs539140922 1915 dbSNP
rs1411988202 1916 dbSNP
rs1458366219 1919 dbSNP
rs1323087578 1922 dbSNP
rs1343968470 1925 dbSNP
rs1233304321 1933 dbSNP
rs927033162 1947 dbSNP
rs958515360 1948 dbSNP
rs1303356127 1963 dbSNP
rs1388557676 1968 dbSNP
rs1368458357 1982 dbSNP
rs1430699406 1983 dbSNP
rs17107416 1984 dbSNP
rs999854560 1986 dbSNP
rs916874162 1990 dbSNP
rs1370261961 1991 dbSNP
rs1434521067 1994 dbSNP
rs534436518 1995 dbSNP
rs1037215663 2010 dbSNP
rs894195172 2017 dbSNP
rs553091305 2024 dbSNP
rs1252110889 2028 dbSNP
rs1345516289 2031 dbSNP
rs201098838 2031 dbSNP
rs1257667033 2038 dbSNP
rs931453172 2047 dbSNP
rs1048592794 2051 dbSNP
rs1306298667 2061 dbSNP
rs1408102761 2062 dbSNP
rs1446324691 2063 dbSNP
rs1308911152 2064 dbSNP
rs1414531136 2064 dbSNP
rs1400593271 2077 dbSNP
rs1222306174 2078 dbSNP
rs577745536 2080 dbSNP
rs572621861 2091 dbSNP
rs538635074 2094 dbSNP
rs1363746034 2095 dbSNP
rs1025847185 2096 dbSNP
rs558529644 2096 dbSNP
rs951673139 2118 dbSNP
rs1186839285 2127 dbSNP
rs1484559178 2140 dbSNP
rs1006938758 2144 dbSNP
rs1473257678 2149 dbSNP
rs984069025 2157 dbSNP
rs1200827513 2158 dbSNP
rs1041169851 2162 dbSNP
rs901146821 2165 dbSNP
rs189812421 2172 dbSNP
rs1400631940 2176 dbSNP
rs533496197 2179 dbSNP
rs975543482 2183 dbSNP
rs1336498984 2188 dbSNP
rs1396992984 2203 dbSNP
rs1384817413 2207 dbSNP
rs1319176367 2209 dbSNP
rs11206028 2211 dbSNP
rs933847127 2213 dbSNP
rs1302730816 2217 dbSNP
rs1351318668 2218 dbSNP
rs1411945333 2228 dbSNP
rs1286526748 2229 dbSNP
rs968704185 2229 dbSNP
rs1350125178 2232 dbSNP
rs1000428508 2235 dbSNP
rs1041607519 2236 dbSNP
rs1034152781 2241 dbSNP
rs1427746440 2250 dbSNP
rs1259550851 2251 dbSNP
rs958788193 2264 dbSNP
rs992512862 2268 dbSNP
rs1228761846 2269 dbSNP
rs1213163255 2271 dbSNP
rs759117614 2273 dbSNP
rs769427797 2274 dbSNP
rs1245941457 2278 dbSNP
rs971725591 2279 dbSNP
rs935925079 2280 dbSNP
rs918833465 2282 dbSNP
rs1221491879 2285 dbSNP
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rs768447507 2300 dbSNP
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rs527989522 2990 dbSNP
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rs1324425848 2997 dbSNP
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rs1291799578 3010 dbSNP
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rs1376494471 3010 dbSNP
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rs1156330279 3025 dbSNP
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rs1031754486 3051 dbSNP
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rs1261571015 3072 dbSNP
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rs978015033 3209 dbSNP
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rs921402030 3404 dbSNP
rs1227322274 3416 dbSNP
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rs1247927690 3643 dbSNP
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rs774177101 3647 dbSNP
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rs138690430 5358 dbSNP
rs370746737 5358 dbSNP
rs1372712001 5362 dbSNP
rs1191212642 5363 dbSNP
rs1478930381 5365 dbSNP
rs1264286877 5368 dbSNP
rs937786363 5368 dbSNP
rs1489993622 5370 dbSNP
rs1055867331 5372 dbSNP
rs895991195 5375 dbSNP
rs78335417 5392 dbSNP
rs1037775557 5401 dbSNP
rs1469215570 5402 dbSNP
rs1229090438 5409 dbSNP
rs1159086685 5411 dbSNP
rs900628868 5431 dbSNP
rs556339259 5435 dbSNP
rs1051733884 5442 dbSNP
rs572563521 5449 dbSNP
rs890464525 5452 dbSNP
rs1347304656 5461 dbSNP
rs1317438453 5474 dbSNP
rs772730397 5478 dbSNP
rs574529245 5487 dbSNP
rs749061019 5487 dbSNP
rs1395785361 5509 dbSNP
rs776786651 5536 dbSNP
rs1031350062 5537 dbSNP
rs1467340621 5543 dbSNP
rs893628334 5544 dbSNP
rs1406464798 5547 dbSNP
rs541935370 5562 dbSNP
rs953458029 5570 dbSNP
rs1023337907 5600 dbSNP
rs1233083580 5601 dbSNP
rs1248961679 5602 dbSNP
rs187502200 5604 dbSNP
rs543191743 5612 dbSNP
rs1247749686 5629 dbSNP
rs986231414 5635 dbSNP
rs1034606870 5640 dbSNP
rs1285808787 5642 dbSNP
rs763280618 5649 dbSNP
rs1018748512 5654 dbSNP
rs951067676 5655 dbSNP
rs1490574446 5658 dbSNP
rs983691917 5662 dbSNP
rs1325332479 5663 dbSNP
rs111675772 5669 dbSNP
rs768014093 5674 dbSNP
rs1326901609 5675 dbSNP
rs200259722 5675 dbSNP
rs537206889 5675 dbSNP
rs1480153634 5686 dbSNP
rs1401284537 5690 dbSNP
rs1300319457 5691 dbSNP
rs1336400645 5696 dbSNP
rs942211558 5700 dbSNP
rs974015198 5702 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
IDDuplex structurePosition
1 
miRNA  3' guuUGUGGUAACAGUGUGAGGu 5'
             |::||| |   :|||||| 
Target 5' aucAUGCCACU---GCACUCCa 3'
 		2 - 20
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions Prostate Tissue
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRX1760631. RNA binding protein: AGO2. Condition:AGO-CLIP-22RV1_B ...

- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.).

miRNA-target interactions (Provided by authors)
IDDuplex structurePosition
1 
miRNA  3' guuUGUGGUAACAG---UGUGAGGu 5'
             |:|:|| || |   :|||||| 
Target 5' ---AUAUCA-UGCCACUGCACUCCa 3'
 		1 - 21
Article - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al.
- Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000294353.6 | 3UTR | UAUCAUGCCACUGCACUCCAGCCUGGGUGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28544 Breast cancer 0.499 6.5e-3 0.485 8.1e-3 24 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.379 3.1e-2 -0.338 4.9e-2 25 Click to see details
GSE38226 Liver fibrosis 0.273 1.2e-1 0.350 6.0e-2 21 Click to see details
GSE21687 Ependynoma primary tumors 0.121 1.7e-1 0.032 4.0e-1 64 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.374 2.3e-1 0.486 1.6e-1 6 Click to see details
GSE42095 Differentiated embryonic stem cells 0.158 2.4e-1 0.476 1.1e-2 23 Click to see details
GSE27834 Pluripotent stem cells -0.191 2.4e-1 -0.206 2.2e-1 16 Click to see details
GSE26953 Aortic valvular endothelial cells 0.15 2.4e-1 0.204 1.7e-1 24 Click to see details
GSE32688 Pancreatic cancer -0.115 2.7e-1 -0.148 2.1e-1 32 Click to see details
GSE21849 B cell lymphoma -0.108 2.9e-1 0.221 1.2e-1 29 Click to see details
GSE14794 Lymphoblastoid cells -0.045 3.4e-1 -0.069 2.6e-1 90 Click to see details
GSE28260 Renal cortex and medulla -0.129 3.4e-1 -0.088 3.9e-1 13 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.085 3.4e-1 -0.220 1.5e-1 25 Click to see details
GSE17306 Multiple myeloma -0.059 3.4e-1 -0.029 4.2e-1 49 Click to see details
GSE19350 CNS germ cell tumors 0.102 3.8e-1 0.444 7.4e-2 12 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.074 3.8e-1 -0.205 1.9e-1 20 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
LIHC 0.342 0.01 0.335 0.01 49 Click to see details
STAD -0.68 0.03 -0.595 0.06 8 Click to see details
KIRC 0.265 0.08 0.258 0.09 29 Click to see details
HNSC 0.795 0.21 0.500 0.33 3 Click to see details
ESCA -0.43 0.23 -0.300 0.31 5 Click to see details
KICH -0.298 0.24 -0.381 0.18 8 Click to see details
THCA 0.356 0.28 0.500 0.2 5 Click to see details
KIRP 0.112 0.39 0.267 0.24 9 Click to see details
CHOL 0.024 0.48 0.200 0.3 9 Click to see details
CHOL 0.024 0.48 0.200 0.3 9 Click to see details
CHOL 0.024 0.48 0.200 0.3 9 Click to see details
CHOL 0.024 0.48 0.200 0.3 9 Click to see details
CHOL 0.024 0.48 0.200 0.3 9 Click to see details
CHOL 0.024 0.48 0.200 0.3 9 Click to see details
MiRNA Regulatory Network:
Functional analysis:
Strong evidence (reporter assay, western blot, qRT-PCR or qPCR) Other evidence
Transcription factor regulation Circular RNA sponge
539 hsa-miR-122-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000012 CYP7A1 cytochrome P450 family 7 subfamily A member 1 3 1
MIRT000364 IGF1R insulin like growth factor 1 receptor 4 3
MIRT000365 SRF serum response factor 4 1
MIRT000663 RAC1 Rac family small GTPase 1 5 2
MIRT000717 RHOA ras homolog family member A 2 2
MIRT003006 CCNG1 cyclin G1 4 4
MIRT003079 GTF2B general transcription factor IIB 2 1
MIRT003080 GYS1 glycogen synthase 1 4 2
MIRT003081 ANK2 ankyrin 2 3 1
MIRT003082 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 3 1
MIRT003083 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 4 2
MIRT003084 ANXA11 annexin A11 4 2
MIRT003085 ALDOA aldolase, fructose-bisphosphate A 3 2
MIRT003086 RAB6B RAB6B, member RAS oncogene family 3 1
MIRT003087 RAB11FIP1 RAB11 family interacting protein 1 5 3
MIRT003088 FOXP1 forkhead box P1 3 1
MIRT003089 MECP2 methyl-CpG binding protein 2 3 2
MIRT003090 NCAM1 neural cell adhesion molecule 1 4 3
MIRT003091 UBAP2 ubiquitin associated protein 2 3 1
MIRT003092 TBX19 T-box 19 3 1
MIRT003093 AACS acetoacetyl-CoA synthetase 3 1
MIRT003094 DUSP2 dual specificity phosphatase 2 3 1
MIRT003095 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 3 1
MIRT003097 MAPK11 mitogen-activated protein kinase 11 3 1
MIRT003098 FUNDC2 FUN14 domain containing 2 3 1
MIRT003099 AKT3 AKT serine/threonine kinase 3 3 3
MIRT003100 TPD52L2 tumor protein D52 like 2 4 3
MIRT003102 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 4 2
MIRT003103 G6PC3 glucose-6-phosphatase catalytic subunit 3 4 2
MIRT003104 AP3M2 adaptor related protein complex 3 mu 2 subunit 3 1
MIRT003105 SLC7A1 solute carrier family 7 member 1 4 4
MIRT003106 XPO6 exportin 6 3 1
MIRT003107 FOXJ3 forkhead box J3 3 1
MIRT003108 SLC7A11 solute carrier family 7 member 11 3 1
MIRT003109 TRIB1 tribbles pseudokinase 1 3 1
MIRT003110 EGLN3 egl-9 family hypoxia inducible factor 3 3 1
MIRT003111 NUMBL NUMB like, endocytic adaptor protein 3 1
MIRT003112 ADAM17 ADAM metallopeptidase domain 17 3 5
MIRT003727 DSTYK dual serine/threonine and tyrosine protein kinase 3 2
MIRT003728 FAM117B family with sequence similarity 117 member B 3 1
MIRT004364 BCL2L2 BCL2 like 2 4 2
MIRT004527 PRKAB1 protein kinase AMP-activated non-catalytic subunit beta 1 2 1
MIRT004879 ADAM10 ADAM metallopeptidase domain 10 5 1
MIRT005782 ACVR1C activin A receptor type 1C 1 1
MIRT006123 PRKRA protein activator of interferon induced protein kinase EIF2AK2 4 1
MIRT006421 WNT1 Wnt family member 1 3 1
MIRT007007 PTPN1 protein tyrosine phosphatase, non-receptor type 1 1 1
MIRT007081 NT5C3A 5'-nucleotidase, cytosolic IIIA 1 1
MIRT007082 P4HA1 prolyl 4-hydroxylase subunit alpha 1 1 1
MIRT007083 ZNF395 zinc finger protein 395 1 1
MIRT007084 SOCS1 suppressor of cytokine signaling 1 1 1
MIRT023217 SSR3 signal sequence receptor subunit 3 1 1
MIRT023218 PHOX2A paired like homeobox 2a 1 1
MIRT023219 DZIP1L DAZ interacting zinc finger protein 1 like 1 1
MIRT023220 GSTM2 glutathione S-transferase mu 2 1 1
MIRT023221 RAI14 retinoic acid induced 14 1 1
MIRT023222 STARD13 StAR related lipid transfer domain containing 13 1 1
MIRT023223 CNN3 calponin 3 1 1
MIRT023224 A2M alpha-2-macroglobulin 1 1
MIRT023225 EFCAB6 EF-hand calcium binding domain 6 1 1
MIRT023226 GLOD4 glyoxalase domain containing 4 1 1
MIRT023227 CALR calreticulin 1 1
MIRT023228 POFUT1 protein O-fucosyltransferase 1 1 1
MIRT023229 PYGO1 pygopus family PHD finger 1 1 1
MIRT023230 CDY2B chromodomain Y-linked 2B 1 1
MIRT023231 CDC42EP3 CDC42 effector protein 3 1 1
MIRT023232 CS citrate synthase 3 3
MIRT023233 RNF170 ring finger protein 170 3 3
MIRT023234 GTF3C6 general transcription factor IIIC subunit 6 1 1
MIRT023235 ZNF321P zinc finger protein 321, pseudogene 1 1
MIRT023236 LAMP1 lysosomal associated membrane protein 1 1 1
MIRT023237 SLC52A2 solute carrier family 52 member 2 1 1
MIRT023238 ZNF658 zinc finger protein 658 1 1
MIRT023239 ATP13A3 ATPase 13A3 1 1
MIRT023240 CPNE5 copine 5 1 1
MIRT023241 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT023242 TMEM136 transmembrane protein 136 1 1
MIRT023243 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT023244 TMEM74 transmembrane protein 74 1 1
MIRT023245 ANKRD10 ankyrin repeat domain 10 1 1
MIRT023246 TBL1XR1 transducin beta like 1 X-linked receptor 1 1 1
MIRT023247 USP10 ubiquitin specific peptidase 10 1 1
MIRT023248 AKAP11 A-kinase anchoring protein 11 1 1
MIRT023249 BACH2 BTB domain and CNC homolog 2 1 1
MIRT023250 HCCS holocytochrome c synthase 1 1
MIRT023251 Slc7a1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 1 1
MIRT023252 GTDC2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1 1
MIRT023253 CTPS1 CTP synthase 1 1 1
MIRT023254 SLC44A1 solute carrier family 44 member 1 1 1
MIRT023255 CLSPN claspin 1 1
MIRT023256 RABGEF1 RAB guanine nucleotide exchange factor 1 1 1
MIRT023257 FBXO7 F-box protein 7 1 1
MIRT023258 NCDN neurochondrin 1 1
MIRT023259 SOX2 SRY-box 2 1 1
MIRT023260 ZNF618 zinc finger protein 618 1 1
MIRT023261 ABLIM1 actin binding LIM protein 1 1 1
MIRT023262 ZBTB4 zinc finger and BTB domain containing 4 1 1
MIRT023263 LUZP1 leucine zipper protein 1 1 1
MIRT023264 NLGN3 neuroligin 3 1 1
MIRT023265 PRR11 proline rich 11 1 1
MIRT023266 HHAT hedgehog acyltransferase 1 1
MIRT023267 UBE2L3 ubiquitin conjugating enzyme E2 L3 1 1
MIRT023268 DNAJC18 DnaJ heat shock protein family (Hsp40) member C18 1 1
MIRT023269 FAM102A family with sequence similarity 102 member A 1 1
MIRT023270 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 1 1
MIRT023271 DENND2C DENN domain containing 2C 1 1
MIRT023272 HMOX1 heme oxygenase 1 3 2
MIRT023273 USP28 ubiquitin specific peptidase 28 1 1
MIRT023274 KRT18 keratin 18 1 1
MIRT023275 BPGM bisphosphoglycerate mutase 1 1
MIRT023276 ZNF233 zinc finger protein 233 1 1
MIRT023277 SLC25A30 solute carrier family 25 member 30 1 1
MIRT023278 ANKRD9 ankyrin repeat domain 9 3 3
MIRT023279 RLN1 relaxin 1 1 1
MIRT023280 DDIT3 DNA damage inducible transcript 3 1 1
MIRT023281 TRIM65 tripartite motif containing 65 1 1
MIRT023282 B4GALT1 beta-1,4-galactosyltransferase 1 1 1
MIRT023283 ANXA7 annexin A7 1 1
MIRT023284 SLC19A2 solute carrier family 19 member 2 1 1
MIRT023285 MARCKS myristoylated alanine rich protein kinase C substrate 1 1
MIRT023286 CLEC11A C-type lectin domain containing 11A 1 1
MIRT023287 CENPF centromere protein F 1 1
MIRT023288 CLDN18 claudin 18 1 1
MIRT023289 PFDN1 prefoldin subunit 1 1 1
MIRT023290 SPAG9 sperm associated antigen 9 1 1
MIRT023291 CEACAM8 carcinoembryonic antigen related cell adhesion molecule 8 1 1
MIRT023292 KRT10 keratin 10 1 1
MIRT023293 SET SET nuclear proto-oncogene 1 1
MIRT023294 SLC11A2 solute carrier family 11 member 2 1 1
MIRT023295 MYCBP MYC binding protein 3 3
MIRT023296 GPHB5 glycoprotein hormone beta 5 1 1
MIRT023297 STAU2 staufen double-stranded RNA binding protein 2 1 1
MIRT023298 NFATC1 nuclear factor of activated T-cells 1 1 1
MIRT023299 ERP29 endoplasmic reticulum protein 29 1 1
MIRT023300 MEP1A meprin A subunit alpha 1 1
MIRT023301 SPTLC1 serine palmitoyltransferase long chain base subunit 1 1 1
MIRT023302 GTF2H2 general transcription factor IIH subunit 2 1 1
MIRT023303 C14orf39 chromosome 14 open reading frame 39 1 1
MIRT023304 UBE2K ubiquitin conjugating enzyme E2 K 1 1
MIRT023305 PPP1R9B protein phosphatase 1 regulatory subunit 9B 1 1
MIRT023306 PSMD10 proteasome 26S subunit, non-ATPase 10 1 1
MIRT023307 CALD1 caldesmon 1 1 1
MIRT023308 TTYH3 tweety family member 3 1 1
MIRT023309 NMNAT2 nicotinamide nucleotide adenylyltransferase 2 1 1
MIRT023310 SCN4B sodium voltage-gated channel beta subunit 4 1 1
MIRT023311 C1orf122 chromosome 1 open reading frame 122 1 1
MIRT023312 PAK1 p21 (RAC1) activated kinase 1 1 1
MIRT023313 DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 1 1
MIRT023314 DMXL1 Dmx like 1 1 1
MIRT023315 ZNF160 zinc finger protein 160 1 1
MIRT023316 CSRP1 cysteine and glycine rich protein 1 1 1
MIRT023317 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT023318 RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit 1 1
MIRT023319 ANKRD13C ankyrin repeat domain 13C 1 1
MIRT023320 SUCLA2 succinate-CoA ligase ADP-forming beta subunit 1 1
MIRT023321 PEA15 phosphoprotein enriched in astrocytes 15 1 1
MIRT023322 MTPN myotrophin 1 1
MIRT023323 YKT6 YKT6 v-SNARE homolog 1 1
MIRT023324 MOB3B MOB kinase activator 3B 1 1
MIRT023325 FAM118A family with sequence similarity 118 member A 1 1
MIRT023326 ZNF264 zinc finger protein 264 1 1
MIRT023327 HECTD3 HECT domain E3 ubiquitin protein ligase 3 1 1
MIRT023328 BATF2 basic leucine zipper ATF-like transcription factor 2 1 1
MIRT023329 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 1 1
MIRT023330 MAPRE1 microtubule associated protein RP/EB family member 1 1 1
MIRT023331 TBC1D22B TBC1 domain family member 22B 1 1
MIRT023332 SLC9A1 solute carrier family 9 member A1 3 3
MIRT023333 NPEPPS aminopeptidase puromycin sensitive 1 1
MIRT023334 BCL2L1 BCL2 like 1 2 1
MIRT023335 OSMR oncostatin M receptor 1 1
MIRT023336 CALU calumenin 1 1
MIRT023337 BRI3BP BRI3 binding protein 1 1
MIRT023338 PSPH phosphoserine phosphatase 1 1
MIRT023339 APMAP adipocyte plasma membrane associated protein 1 1
MIRT023340 WASF1 WAS protein family member 1 1 1
MIRT023341 LCA5 LCA5, lebercilin 1 1
MIRT023342 NODAL nodal growth differentiation factor 1 1
MIRT023343 CASP7 caspase 7 1 1
MIRT023344 CPA3 carboxypeptidase A3 1 1
MIRT023345 PALM paralemmin 1 1
MIRT023346 TCP11 t-complex 11 1 1
MIRT023347 NALCN sodium leak channel, non-selective 1 1
MIRT023348 PLAGL2 PLAG1 like zinc finger 2 1 1
MIRT023349 IDS iduronate 2-sulfatase 3 3
MIRT023350 PARP11 poly(ADP-ribose) polymerase family member 11 1 1
MIRT023351 MAZ MYC associated zinc finger protein 1 1
MIRT023352 CPNE4 copine 4 1 1
MIRT023353 FAM19A3 family with sequence similarity 19 member A3, C-C motif chemokine like 1 1
MIRT023354 KRT14 keratin 14 1 1
MIRT023355 DYNC1H1 dynein cytoplasmic 1 heavy chain 1 1 1
MIRT023356 GNL3L G protein nucleolar 3 like 1 1
MIRT023357 HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 1 1
MIRT023358 EYA4 EYA transcriptional coactivator and phosphatase 4 1 1
MIRT023359 GNPDA2 glucosamine-6-phosphate deaminase 2 1 1
MIRT023360 BRCA2 BRCA2, DNA repair associated 1 1
MIRT023361 ZSCAN4 zinc finger and SCAN domain containing 4 1 1
MIRT023362 HSPA5 heat shock protein family A (Hsp70) member 5 1 1
MIRT023363 SERAC1 serine active site containing 1 1 1
MIRT023364 SLC15A2 solute carrier family 15 member 2 1 1
MIRT023365 RABIF RAB interacting factor 1 1
MIRT023366 ART3 ADP-ribosyltransferase 3 1 1
MIRT023367 EP400 E1A binding protein p400 1 1
MIRT023368 MT4 metallothionein 4 1 1
MIRT023369 TRAM2 translocation associated membrane protein 2 1 1
MIRT023370 PHPT1 phosphohistidine phosphatase 1 1 1
MIRT023371 KIAA0101 PCNA clamp associated factor 1 1
MIRT023372 VHL von Hippel-Lindau tumor suppressor 1 1
MIRT023373 IFNA1 interferon alpha 1 1 1
MIRT023374 FSTL3 follistatin like 3 1 1
MIRT023375 PHF14 PHD finger protein 14 1 1
MIRT023376 ZCCHC2 zinc finger CCHC-type containing 2 1 1
MIRT023377 GSTM3 glutathione S-transferase mu 3 1 1
MIRT023378 DCTN5 dynactin subunit 5 1 1
MIRT023379 CHST3 carbohydrate sulfotransferase 3 1 1
MIRT023380 HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 1 1
MIRT023381 ADO 2-aminoethanethiol dioxygenase 1 1
MIRT023382 POMZP3 POM121 and ZP3 fusion 1 1
MIRT023383 CHST12 carbohydrate sulfotransferase 12 1 1
MIRT023384 ARSB arylsulfatase B 1 1
MIRT023385 ATP7A ATPase copper transporting alpha 1 1
MIRT023386 PMP22 peripheral myelin protein 22 1 1
MIRT023387 TGFBRAP1 transforming growth factor beta receptor associated protein 1 1 1
MIRT023388 ORC2 origin recognition complex subunit 2 1 1
MIRT023389 CREB1 cAMP responsive element binding protein 1 1 1
MIRT023390 CD83 CD83 molecule 1 1
MIRT023391 TOB2 transducer of ERBB2, 2 3 5
MIRT023392 LRP11 LDL receptor related protein 11 1 1
MIRT023393 MPV17 MPV17, mitochondrial inner membrane protein 1 1
MIRT023394 TRIM29 tripartite motif containing 29 1 1
MIRT023395 OSBP2 oxysterol binding protein 2 1 1
MIRT023396 PKM pyruvate kinase, muscle 6 4
MIRT023397 FOXK2 forkhead box K2 3 3
MIRT023398 CLIC4 chloride intracellular channel 4 5 6
MIRT023399 ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 1 1
MIRT023400 SMURF2 SMAD specific E3 ubiquitin protein ligase 2 1 1
MIRT023401 LMNB2 lamin B2 3 5
MIRT023402 BAX BCL2 associated X, apoptosis regulator 2 2
MIRT023403 CDK4 cyclin dependent kinase 4 3 3
MIRT054362 Cux1 cut-like homeobox 1 1 1
MIRT074336 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT109185 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT324745 ACER2 alkaline ceramidase 2 2 2
MIRT325564 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT438005 MEF2D myocyte enhancer factor 2D 1 2
MIRT438206 TGFB1 transforming growth factor beta 1 1 1
MIRT438639 AXL AXL receptor tyrosine kinase 1 1
MIRT438655 NOD2 nucleotide binding oligomerization domain containing 2 3 1
MIRT438734 FUT8 fucosyltransferase 8 3 1
MIRT449879 CYP3A5 cytochrome P450 family 3 subfamily A member 5 2 2
MIRT451716 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT453274 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT454113 MRPL52 mitochondrial ribosomal protein L52 2 2
MIRT454232 OSBPL10 oxysterol binding protein like 10 2 15
MIRT454344 CDKL1 cyclin dependent kinase like 1 2 2
MIRT455826 ZSWIM1 zinc finger SWIM-type containing 1 2 3
MIRT459903 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 12
MIRT461654 G6PC glucose-6-phosphatase catalytic subunit 2 2
MIRT461934 TNFSF14 TNF superfamily member 14 2 2
MIRT463834 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT468615 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT469456 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT469637 RAD21 RAD21 cohesin complex component 2 6
MIRT473432 MDM4 MDM4, p53 regulator 2 2
MIRT473872 MAFK MAF bZIP transcription factor K 2 6
MIRT476861 FHL2 four and a half LIM domains 2 2 4
MIRT476893 FBXO21 F-box protein 21 2 2
MIRT479880 CCDC43 coiled-coil domain containing 43 2 2
MIRT488848 UBTF upstream binding transcription factor, RNA polymerase I 2 2
MIRT491164 LRP3 LDL receptor related protein 3 2 2
MIRT497662 PRMT3 protein arginine methyltransferase 3 2 2
MIRT499314 ZNF485 zinc finger protein 485 2 10
MIRT499759 CIRH1A UTP4, small subunit processome component 2 10
MIRT500014 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501090 SLC7A5 solute carrier family 7 member 5 2 4
MIRT509646 ZNF354B zinc finger protein 354B 2 10
MIRT509945 TOMM70A translocase of outer mitochondrial membrane 70 2 6
MIRT510320 SLC2A3 solute carrier family 2 member 3 2 4
MIRT515505 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT516410 COPA coatomer protein complex subunit alpha 2 2
MIRT517861 NCAPD2 non-SMC condensin I complex subunit D2 2 4
MIRT522558 MCAM melanoma cell adhesion molecule 2 4
MIRT523525 GLUL glutamate-ammonia ligase 2 2
MIRT523764 FBXO27 F-box protein 27 2 4
MIRT524517 CDK19 cyclin dependent kinase 19 2 2
MIRT524753 BIRC5 baculoviral IAP repeat containing 5 2 6
MIRT529366 YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta 2 4
MIRT531189 SIGLEC12 sialic acid binding Ig like lectin 12 (gene/pseudogene) 2 2
MIRT531639 C19orf52 translocase of inner mitochondrial membrane 29 2 4
MIRT531913 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 2
MIRT532678 PATZ1 POZ/BTB and AT hook containing zinc finger 1 2 2
MIRT533115 YIPF4 Yip1 domain family member 4 2 4
MIRT534740 RBM47 RNA binding motif protein 47 2 2
MIRT535471 PARVB parvin beta 2 4
MIRT536742 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT537237 GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 2 2
MIRT539523 ABCF1 ATP binding cassette subfamily F member 1 2 4
MIRT540438 RBM43 RNA binding motif protein 43 2 2