miRTarBase - #MIRT000415


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pre-miRNA Information
pre-miRNA hsa-let-7a-1   
Genomic Coordinates chr9: 94175957 - 94176036
Synonyms LET7A1, MIRNLET7A1, let-7a-1, MIRLET7A1
Description Homo sapiens let-7a-1 stem-loop
Comment let-7a-3p cloned in has a 1 nt 3' extension (U), which is incompatible with the genome sequence.
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-let-7a-2   
Genomic Coordinates chr11: 122146522 - 122146593
Synonyms LET7A2, MIRNLET7A2, let-7a-2, MIRLET7A2
Description Homo sapiens let-7a-2 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-let-7a-3   
Genomic Coordinates chr22: 46112749 - 46112822
Synonyms LET7A3, MIRNLET7A3, let-7a-3, MIRLET7A3
Description Homo sapiens let-7a-3 stem-loop
Comment let-7a-3p cloned in has a 1 nt 3' extension (U), which is incompatible with the genome sequence.
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7a-5p
Sequence 6| UGAGGUAGUAGGUUGUAUAGUU |27
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 10 9 + 94175971 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs201607747 1 dbSNP
rs1362975136 6 dbSNP
rs751394786 13 dbSNP
rs1176612700 15 dbSNP
rs1396618771 16 dbSNP
rs760725471 17 dbSNP
rs770465876 21 dbSNP
miRNA Oxidation Modification
Oxidation Position Sequence (5'-3') Target Gene Validation Method PMID
4 UGAGGUAGUAGGUUGUAUAGUU CLTA; HOXB3; AZIN1 Luciferase reporter assay 37696949
4 UGAGGUAGUAGGUUGUAUAGUU not mentioned qPCR 38912549
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CDK6   
Synonyms MCPH12, PLSTIRE
Description cyclin dependent kinase 6
Transcript NM_001145306   
Other Transcripts NM_001259   
Expression
Putative miRNA Targets on CDK6
3'UTR of CDK6
(miRNA target sites are highlighted)		 
>CDK6|NM_001145306|3'UTR
   1 GGCCTCAGCAGCCGCCTTAAGCTGATCCTGCGGAGAACACCCTTGGTGGCTTATGGGTCCCCCTCAGCAAGCCCTACAGA
  81 GCTGTGGAGGATTGCTATCTGGAGGCCTTCCAGCTGCTGTCTTCTGGACAGGCTCTGCTTCTCCAAGGAAACCGCCTAGT
 161 TTACTGTTTTGAAATCAATGCAAGAGTGATTGCAGCTTTATGTTCATTTGTTTGTTTGTTTGTCTGTTTGTTTCAAGAAC
 241 CTGGAAAAATTCCAGAAGAAGAGAAGCTGCTGACCAATTGTGCTGCCATTTGATTTTTCTAACCTTGAATGCTGCCAGTG
 321 TGGAGTGGGTAATCCAGGCACAGCTGAGTTATGATGTAATCTCTCTGCAGCTGCCGGGCCTGATTTGGTACTTTTGAGTG
 401 TGTGTGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGAGAGATTCTGTGATCTTTTAAAGTGTTACTTT
 481 TTGTAAACGACAAGAATAATTCAATTTTAAAGACTCAAGGTGGTCAGTAAATAACAGGCATTTGTTCACTGAAGGTGATT
 561 CACCAAAATAGTCTTCTCAAATTAGAAAGTTAACCCCATGTCCTCAGCATTTCTTTTCTGGCCAAAAGCAGTAAATTTGC
 641 TAGCAGTAAAAGATGAAGTTTTATACACACAGCAAAAAGGAGAAAAAATTCTAGTATATTTTAAGAGATGTGCATGCATT
 721 CTATTTAGTCTTCAGAATGCTGAATTTACTTGTTGTAAGTCTATTTTAACCTTCTGTATGACATCATGCTTTATCATTTC
 801 TTTTGGAAAATAGCCTGTAAGCTTTTTATTACTTGCTATAGGTTTAGGGAGTGTACCTCAGATAGATTTTAAAAAAAAGA
 881 ATAGAAAGCCTTTATTTCCTGGTTTGAAATTCCTTTCTTCCCTTTTTTTGTTGTTGTTATTGTTGTTTGTTGTTGTTATT
 961 TTGTTTTTGTTTTTAGGAATTTGTCAGAAACTCTTTCCTGTTTTGGTTTGGAGAGTAGTTCTCTCTAACTAGAGACAGGA
1041 GTGGCCTTGAAATTTTCCTCATCTATTACACTGTACTTTCTGCCACACACTGCCTTGTTGGCAAAGTATCCATCTTGTCT
1121 ATCTCCCGGCACTTCTGAAATATATTGCTACCATTGTATAACTAATAACAGATTGCTTAAGCTGTTCCCATGCACCACCT
1201 GTTTGCTTGCTTTCAATGAACCTTTCATAAATTCGCAGTCTCAGCTTATGGTTTATGGCCTCGATTCTGCAAACCTAACA
1281 GGGTCACATATGTTCTCTAATGCAGTCCTTCTACCTGGTGTTTACTTTTGTTACCTAAATAATGAGTAGGATCTTGTTTT
1361 GTTTTATCACCAGCACACAGATTGCTATAAACTGTTACTTTGTGAATTACATTTTTATAGAAGATATTTTCAGTGTCTTT
1441 ACCTGAGGGTATGTCTTTAGCTATGTTTTAGGGCCATACATTTACTCTATCAAATGATCTTTTCTCCATCCCCCAGGCTG
1521 TGCTTATTTCTAGTGCCTTGTGCTCACTCCTGCTCTCTACAGAGCCAGCCTGGCCTGGGCATTGTAAACAGCTTTTCCTT
1601 TTTCTCTTACTGTTTTCTCTACAGTCCTTTATATTTCATACCATCTCTGCCTTATAAGTGGTTTAGTGCTCAGTTGGCTC
1681 TAGTAACCAGAGGACACAGAAAGTATCTTTTGGAAAGTTTAGCCACCTGTGCTTTCTGACTCAGAGTGCATGCAACAGTT
1761 AGATCATGCAACAGTTAGATTATGTTTAGGGTTAGGATTTTCAAAGAATGGAGGTTGCTGCACTCAGAAAATAATTCAGA
1841 TCATGTTTATGCATTATTAAGTTGTACTGAATTCTTTGCAGCTTAATGTGATATATGACTATCTTGAACAAGAGAAAAAA
1921 CTAGGAGATGTTTCTCCTGAAGAGCTTTTGGGGTTGGGAACTATTCTTTTTTAATTGCTGTACTACTTAACATTGTTCTA
2001 ATTCAGTAGCTTGAGGAACAGGAACATTGTTTTCTAGAGCAAGATAATAAAGGAGATGGGCCATACAAATGTTTTCTACT
2081 TTCGTTGTGACAACATTGATTAGGTGTTGTCAGTACTATAAATGCTTGAGATATAATGAATCCACAGCATTCAAGGTCAG
2161 GTCTACTCAAAGTCTCACATGGAAAAGTGAGTTCTGCCTTTCCTTTGATCGAGGGTCAAAATACAAAGACATTTTTGCTA
2241 GGGCCTACAAATTGAATTTAAAAACTCACTGCACTGATTCATCTGAGCTTTTTGGTTAGTATTCATGGCTAGAGTGAACA
2321 TAGCTTTAGTTTTTGCTGTTGTAAAAGTGTTTTCATAAGTTCACTCAAGAAAAATGCAGCTGTTCTGAACTGGAATTTTT
2401 CAGCATTCTTTAGAATTTTAAATGAGTAGAGAGCTCAACTTTTATTCCTAGCATCTGCTTTTGACTCATTTCTAGGCAGT
2481 GCTTATGAAGAAAAATTAAAGCACAAACATTCTGGCATTCAATCGTTGGCAGATTATCTTCTGATGACACAGAATGAAAG
2561 GGCATCTCAGCCTCTCTGAACTTTGTAAAAATCTGTCCCCAGTTCTTCCATCGGTGTAGTTGTTGCATTTGAGTGAATAC
2641 TCTCTTGATTTATGTATTTTATGTCCAGATTCGCCATTTCTGAAATCCAGATCCAACACAAGCAGTCTTGCCGTTAGGGC
2721 ATTTTGAAGCAGATAGTAGAGTAAGAACTTAGTGACTACAGCTTATTCTTCTGTAACATATGGTTTCAAACATCTTTGCC
2801 AAAAGCTAAGCAGTGGTGAACTGAAAAGGGCATATTGCCCCAAGGTTACACTGAAGCAGCTCATAGCAAGTTAAAATATT
2881 GTGACAGATTTGAAATCATGTTTGAATTTCATAGTAGGACCAGTACAAGAATGTCCCTGCTAGTTTCTGTTTGATGTTTG
2961 GTTCTGGCGGCTCAGGCATTTTGGGAACTGTTGCACAGGGTGGAGTCAAAACAACCTACATATAAAAAGAGAAAAAGAGA
3041 AACTTGTCCATTTAGCTTTCATAAGAAATCCCATGGCAAAGGGTAATAAAAAGGACCTAATCTTAAAAATACAATTTCTA
3121 AGCACTTGTAAGAACCCAGTGGGTTGGAGCCTCCCACTTTGTCCCTCCTTTGAAGTGGATGGGAACTCAAGGTGCAAAGA
3201 ACCTGTTTTGGAAGAAAGCTTGGGGCCATTTCAGCCCCCTGTATTCTCATGATTTTCTCTCAGGAAGCACACACTGTGAA
3281 TGGCAGACTTTTCATTTAGCCCCAGGTGACTTACTAAAAATAGTTGAAAATTATTCACCTAAGAATAGAATCTCAGCATT
3361 GTGTTAAATAAAAATGAAAGCTTTAGAAGGCATGAGATGTTCCTATCTTAAATAAAGCATGTTTCTTTTCTATAGAGAAA
3441 TGTATAGTTTGACTCTCCAGAATGTACTATCCATCTTGATGAGAAAACTCTTAAATAGTACCAAACATTTTGAACTTTAA
3521 ATTATGTATTTAAAGTGAGTGTTTAAGAAACTGTAGCTGCTTCTTTTACAAGTGGTGCCTATTAAAGTCAGTAATGGCCA
3601 TTATTGTTCCATTGTGGAAATTAAATTATGTAAGCTTCCTAATATCATAAACATATTAAAATTCTTCTAAAATATTGCTT
3681 TTCTTTTAAGTGACAATTTGACTATTCTTATGATAAGCACATGAGAGTGTCTTACATTTTCCAAAAGCAGGCTTTAATTG
3761 CATAGTTGAGTCTAGGAAAAAATAATGTTAAAAGTGAATATGCCACCATAATTACTTAATTATGTTAGTATAGAAACTAC
3841 AGAATATTTACCCTGGAAAGAAAATATTGGAATGTTATTATAAACTCTTAGATATTTATATAATTCAAAAGAATGCATGT
3921 TTCACATTGTGACAGATAAAGATGTATGATTTCTAAGGCTTTAAAAATTATTCATAAAACAGTGGGCAATAGATAAAGGA
4001 AATTCTGGAGAAAATGAAGGTATTTAAAGGGTAGTTTCAAAGCTATATATATTTTGAAGGATATATTCTTTATGAACAAA
4081 TATATTGTAAAAATTTATACTAAGGTCATCTGGTAACTGTGGGATTAATATGGTCGAAAACAAATGTTATGGAGAAGCTG
4161 TCCCAAGCAAACTAAATTACCTGTACTTTTTTCCCATTTCAAGGGAAGAGGCAACCACATGAAGCAATACTTCTTACACA
4241 TGCCTAAGAACGTTCATTGAAAAAATAAATTTTTAAAAGGCATGTGTTTCCTATGCCACCAATACTTTTGAAAAATTGTG
4321 AACCTTACCCAAAACCATTTATCATGTCCATTAAGTATATTTGGGTATATAATTAGGAAGATATTTACATGTTCCATCTC
4401 CACAGTGGAAAAACTTATTGAGGCTACCAAAGTGTGCCAAGAAATGTAAGTCCTTAGAGTAATTAGAAATGCTGTTTTCC
4481 TCAAAAGCATGAGAAACTAGCATTTTCATTTCTTATTTACTCCCTTTCTATATCAATGCAATTCACAACCCAATTTTAAT
4561 ACATCCCTATATCTCAAGCATTTCTATCTTGTACTTTTTCAGAAAATAAACCAAAAATAATCCTTTGGTCTCTCTATCTT
4641 CTGACCTTTGTAAGCAACAGAAATGTAAAAACAGAAGGGGTCCAATTTTTACACGTTTTTTTCTCAAGTAGCCTTTCTGG
4721 GGATTTTTATTTTCTTAATGAAGTGCCAATCAGCTTTTCAAAATGTTTTCTATTTCTCAGCATTTCCAGGAAGTGATAAC
4801 GTTTAGCTAAATGAGTAGAAGTGGACTTCCTTCAACATATTGTTACCTTGTCTAGCCTTAGGAAGAAAACAAGAGCCACC
4881 TGAAAATAAATACAGGCTCTTTTCGAGCATCTGCTGAAATACTGTTACAGCAATTTGAAGTTGATGTGGTAGGAAAGGAA
4961 GGTGACTTTTCTTGCAAAAGTCTTTCTAAACATTCACACTGTCCTAAGAGATGAGCTTTCTTGTTTTATTCCGGTATATT
5041 CCACAAGGTGGCACTTTTAGAGAAAAACAAATCTGATGAAGACTAAAGAGGTACTTCTAAAAGAGATTTCATTCTAACTT
5121 TATTTTTCTGCGCATATTTAACTCTTTCCTAGCACTTGTTTTTTGGGATGATTAATAGTCTCTATAATGTTCTGTAACTT
5201 CAATATTTTACTTGTTACCTAGGTTCTGAACAATTGTCTGCAAATAAATTGTTCTTAAGGATGGATAATACACCCATTTT
5281 GATCATTTAAGTAAAGAAAGCCTAGTCATTCATTCAGTCAAGAAAAAATTTTTGAAGTACCCAGTTACCTTACTTTTCTA
5361 GATTAAAACAGGCTTAGTTACTAAAAAGGCAGTCCTCATCTGTGAACAGGATAGTTTCGTTAGAAGTATAAAACTCCTTT
5441 AGTGGCCCCAGTTAAAACACACATACCCTCTCTGCTGCTTTCAAATTCCCTAGCATGGTGGCCTTTCAACATTGATTAAA
5521 TTTTAAAATCCTAATTTAAAGATCAGGTGAGCAAAATGAGTAGCACATCAGTAATTCAGTAGACAAAACTTTTGTCTGAA
5601 AAATTGCTGTATTGAAACAGAGCCCTAAAATACCAAAAGACCAGGTAATTTTAACATTTGTGGAATCACAAATGTAAATT
5681 CATAAGAAGCTCTAATTAAAAAAAAAAAGTCTGAAGTATATGAGCATAACAACTTAGGAGTGTGTCTACATACTTAACTT
5761 TTGAAGTTTTTTGGCAACTTTATATACTTTTTTTAAATTTACAAGTCTACTTAAAGACTTCTTATACCCCAAATGATTAA
5841 GTTAATTTTAGAGGTCACCTTTCTCACAGCAGTGTCACTTGAAATTTAGTAGGGAAGGATATTGCAGTATTTTTCAGTTT
5921 CCTTAGCACAGCACCACAGAAAGCAGCTTATTCCTTTTGAGTGGCAGACACTCGACGGTGCCTGCCCAACTTTCCTCCTG
6001 AGTGGCAAGCAGATGAGTCTCAGTAATTCATACTGAACCAAAATGCCACATACACTAGGGGCAGTCAGAAACTGGCTGAG
6081 AAATCCCCCGCCTCATTCGCCCCTCTGCTCCCAGGAACTAGAGTCCAGTTAAAGCCCCTATGCGAAAGGCCGAATTCCAC
6161 CCCAGGGTTTGTTATAACAGTGGCCAGTCTGAACCCCATTTGCTCGTGCTCAAAACTTGATTCCCACTTGAAAGCCTTCC
6241 GGGCGCGCTGCCTCGTTGCCCCGCCCCTTTGGCAGGAGAGAGGCAGTGGGCGAGGCCGGGCTGGGGCCCCGCCTCCCACT
6321 CACCTGCCGGTGCCTGAAATTATGTGCGGCCCCGCGGGCTGCTTTCCGAGGTCAGAGTGCCCTGCTGCTGTCTCAGAGGC
6401 ATCTGTTCTGCAAATCTTAGGAAGAAAAATGTCCCTAGTAGCAAACGGGTGTCTTCTGTGCATAAATAAGTACAACACAA
6481 TTCTCCGAAAGTTCGGGTAAAAAGAGATGCGGTAGCAGCTGCCCTGTGTGAAGCTGTCTACCCCGCATCTCTCAGGCGCT
6561 AAGCTCAGTTTTTGTTTTTGTTTTTGTTTTTTTAAAGAAAAGATGTATAATTGCAGGAATTTTTTTTTATTTTTTTATTT
6641 TCCATCATTCTATATATGTGATGGTGAAAGATATGCCTGGAAAAGTTTTGTTTTGAAAAGTTTATTTTCTGCTTCGTCTT
6721 CAGTTGGCAAAAGCTCTCAATTCTTTAGCTTCCAGTTTCTTTTCTCTCTTTTTCTTTGTTAGGTAATTAAAGGTATGTAA
6801 ACAAATTATCTCATGTAGCAGGGGATTTTCATGTTGAGAGGAATCTTCCGTGTGAGTTGTTTGGTCACACAAATAACCCT
6881 TTCTCAATTTTAGGAGTTTGGATTGTCAAATGTAGGTTTTTCTCAAAGGGGGCATATAACTACATATTGACTGCCAAGAA
6961 CTATGACTGTAGCACTAATCAGCACACATAGAGCCACACAATTATTTAATTTCTAACTCTCTGTGGTCCCTAGAAAAATT
7041 CCGTTGATGTGCTTAGGTTAAAGTTCTGAAGATACCCGTTGTACCCTTACTTGAAAGTTTCTAATCTTAAGTTTTATGAA
7121 ATGCAATAATATGTATCAGCTAGCAATATTTCTGTGATCACCAACAACTCTCAGTTTGATCTTAAAGTCTGAATAATAAA
7201 ACAAATCCCAGCAGTAATACATTTCTTAAACCTCACAGTGCATGATATATCTTTTCATTCTGATCCTGTGTTTGCAAAAA
7281 TATACACATGTATATCATAGTTCCTCACTTTTTATTCATTTGTTTTCCTATTACCTGTAGTAAATATATTAGTTAGTACA
7361 TGGAATTTATAGCATCAGCTACCCCCAGGAACAGCACCTGACAGGCGGGGGATTTTTTTTCAAGTTGTTCTACATTTGCA
7441 TAAATTATTTCTATTATTATTCATGTATGTTATTTATTTCTGAATCACACTAGTCCTGTGAAAGTACAACTGAAGGCAGA
7521 AAGTGTTAGGATTTTGCATCTAATGTTCATTATCATGGTATTGATGGACCTAAGAAAATAAAAATTAGACTAAGCCCCCA
7601 AATAAGCTGCATGCATTTGTAACATGATTAGTAGATTTGAATATATAGATGTAGTATTTTGGGTATCTAGGTGTTTTATC
7681 ATTATGTAAAGGAATTAAAGTAAAGGACTTTGTAGTTGTTTTTATTAAATATGCATATAGTAGAGTGCAAAAATATAGCA
7761 AAAATAAAAACTAAAGGTAGAAAAGCATTTTAGATATGCCTTAATTTAGAAACTGTGCCAGGTGGCCCTCGGAATAGATG
7841 CCAGGCAGAGACCAGTGCCTGGGTGGTGCCTCCTCTTGTCTGCCCTCATGAAGAAGCTTCCCTCACGTGATGTAGTGCCC
7921 TCGTAGGTGTCATGTGGAGTAGTGGGAACAGGCAGTACTGTTGAGAGGAGAGCAGTGTGAGAGTTTTTCTGTAGAAGCAG
8001 AACTGTCAGCTTGTGCCTTGAGGCTTCCAGAACGTGTCAGATGGAGAAGTCCAAGTTTCCATGCTTCAGGCAACTTAGCT
8081 GTGTACAGAAGCAATCCAGTGTGGTAATAAAAAGCAAGGATTGCCTGTATAATTTATTATAAAATAAAAGGGATTTTAAC
8161 AACCAACAATTCCCAACACCTCAAAAGCTTGTTGCATTTTTTGGTATTTGAGGTTTTTATCTGAAGGTTAAAGGGCAAGT
8241 GTTTGGTATAGAAGAGCAGTATGTGTTAAGAAAAGAAAAATATTGGTTCACGTAGAGTGCAAATTAGAACTAGAAAGTTT
8321 TATACGATTATCATTTTGAGATGTGTTAAAGTAGGTTTTCACTGTAAAATGTATTAGTGTTTCTGCATTGCCATAGGGCC
8401 TGGTTAAAACTTTCTCTTAGGTTTCAGGAAGACTGTCACATACAGTAAGCTTTTTTCCTTCTGACTTATAATAGAAAATG
8481 TTTTGAAAGTAAAAAAAAAAAATCTAATTTGGAAATTTGACTTGTTAGTTTCTGTGTTTGAAATCATGGTTCTAGAAATG
8561 TAGAAATTGTGTATATCAGATACTCATCTAGGCTGTGTGAACCAGCCCAAGATGACCAACATCCCCACACCTCTACATCT
8641 CTGTCCCCTGTATCTCTTCCTTTCTACCACTAAAGTGTTCCCTGCTACCATCCTGGCTTGTCCACATGGTGCTCTCCATC
8721 TTCCTCCACATCATGGACCACAGGTGTGCCTGTCTAGGCCTGGCCACCACTCCCAACTTGACCTAGCCACATTCATCTAG
8801 AGATGGTTCCTGATGCTGGGCACAGACTGTGCTCATGGCACCCATTAGAAATGCCTCTAGCATCTTTGTATGCATCTTGA
8881 TTTTTAAACCAAGTCATTGTACAGAGCATTCAGTTTTGGCTGTGGTACCAAGAGAAAAACTAATCAAGAATATAAACCAC
8961 ATTCCAGGCTGCTGTTTTCTCTCCATCTACAGGCCACACTTTTACTGTATTTCTTCATACTTGAAATTCATTCTGCTATT
9041 TTCATATCAGGGTACAGACTTATAAGGGTGCATGTTCCTTAAAGGTGCATAATTATTCTTATTCCGTTTGCTTATATTGC
9121 TACAGAATGCTCTGTTTTGGTGCTTTGAGTTCTGCAGACCCAAGAAGCAGTGTGGAAATTCACTGCCTGGGACACAGTCT
9201 TATAAGAATGTTGGCAGGTGACTTTGTATCAGATGTTGCTTCTCTTTTCTCTGTACACAGATTGAGAGTTACCACAGTGG
9281 CCTGTCGGGTCCACCCTGTGGGTGCAGCACAGCTCTCTGAAAGCAAGAACCTTCCTACCTATTCTAACGTTTTTGCCCTC
9361 TAAGAAAAATGGCCTCAGGTATGGTATAGACATAGCAAGAGGGGAAGGGCTGTCTCACTCTAGCAACCATCCCTCCATTA
9441 CACACAGAAAGCCCTCTTGAAGCAAAAGAAGAAGAAAGAAAGAAAGCTTATCTCTAAGGCTACTGTCTTCAGAATGCTCT
9521 GAGCTGAATGCTCTTGCTCCTTTCCCAAGAGGCAGATGAAAATATAGCCAGTTTATCTATACCCTTCCTATCTGAGGAGG
9601 AGAATAGAAAAGTAGGGTAAATATGTAACGTAAAATATGTCATTCAAGGACCACCAAAACTTTAAGTACCCTATCATTAA
9681 AAATCTGGTTTTAAAAGTAGCTCAAGTAAGGGATGCTTTGTGACCCAGGGTTTCTGAAGTCAGATAGCCATTCTTACCTG
9761 CCCCTTACTCTGACTTATTGGGAAAGGGAGAACTGCAGTGGTGTTTCTGTTGCAGTGGCAAAGGTAACATGTCAGAAAAT
9841 TCAGAGGGTTGCATACCAATAATCCTTTGGAAACTGGATGTCTTACTGGGTGCTAGAATGAAAATGTAGGTATTTATTGT
9921 CAGATGATGAAGTTCATTGTTTTTTTCAAAATTGGTGTTGAAATATCACTGTCCAATGTGTTCACTTATGTGAAAGCTAA
10001 ATTGAATGAGGCAAAAAGAGCAAATAGTTTGTATATTTGTAATACCTTTTGTATTTCTTACAATAAAAATATTGGTAGCA
10081 AATAAAAATAATAAAAACAATAACTTTAAACTGCTTTCTGGAGATGAATTACTCTCCTGGCTATTTTCTTTTTTACTTTA
10161 ATGTAAAATGAGTATAACTGTAGTGAGTAAAATTCATTAAATTCCAAGTTTTAGCAGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuGA-UAUGUU-GGAUGAUGGAgu 5'
            || ||:||: ||| ||||||  
Target 5' ctCTAATGCAGTCCTTCTACCTgg 3'
 1295 - 1318 148.00 -16.80
2 
miRNA  3' uugAUAUGUUGGAU-GAUGGAGu 5'
             ||| || |:|: |||:||| 
Target 5' aagTATCCATCTTGTCTATCTCc 3'
 1104 - 1126 147.00 -10.80
3 
miRNA  3' uugauaUGUUGG-AUGAUGGAgu 5'
                | |||| | ||||||  
Target 5' aaagcaAGAACCTTCCTACCTat 3'
 9320 - 9342 136.00 -13.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30109372 24 COSMIC
COSN30109370 25 COSMIC
COSN31507338 57 COSMIC
COSN26637488 59 COSMIC
COSN24302286 64 COSMIC
COSN31581112 82 COSMIC
COSN30467038 107 COSMIC
COSN17571346 110 COSMIC
COSN31525404 121 COSMIC
COSN31505735 135 COSMIC
COSN30533397 188 COSMIC
COSN31600792 201 COSMIC
COSN30176825 258 COSMIC
COSN20104447 411 COSMIC
COSN18723952 412 COSMIC
COSN31522373 428 COSMIC
COSN27807099 651 COSMIC
COSN26697365 752 COSMIC
COSN8046962 870 COSMIC
COSN14533677 1350 COSMIC
COSN26416152 1354 COSMIC
COSN6597360 1511 COSMIC
COSN31489075 1699 COSMIC
COSN31488404 1744 COSMIC
COSN9515966 1828 COSMIC
COSN6898757 2118 COSMIC
COSN31848707 2376 COSMIC
COSN17349289 2492 COSMIC
COSN26743338 2515 COSMIC
COSN15759471 2564 COSMIC
COSN15870118 2732 COSMIC
COSN7659725 2901 COSMIC
COSN20826064 3417 COSMIC
COSN26281786 3589 COSMIC
COSN17355093 3598 COSMIC
COSN29866065 4208 COSMIC
COSN32062311 4293 COSMIC
COSN17078516 4326 COSMIC
COSN25221196 4390 COSMIC
COSN26803862 4462 COSMIC
COSN8572895 4555 COSMIC
COSN8572894 4581 COSMIC
COSN4922528 4586 COSMIC
COSN8572893 4586 COSMIC
COSN26815718 4594 COSMIC
COSN24986164 4746 COSMIC
COSN27092792 4821 COSMIC
COSN8046961 5065 COSMIC
COSN8046960 5076 COSMIC
COSN24609391 5329 COSMIC
COSN2496934 5484 COSMIC
COSN19541331 5594 COSMIC
COSN27222187 5698 COSMIC
COSN22618186 5830 COSMIC
COSN4935855 5887 COSMIC
COSN2243924 6008 COSMIC
COSN7659724 6144 COSMIC
COSN9774134 6502 COSMIC
COSN20775808 6721 COSMIC
COSN18723908 6734 COSMIC
COSN28645222 7028 COSMIC
COSN31536496 7039 COSMIC
COSN26634654 7058 COSMIC
COSN26603887 7075 COSMIC
COSN31569783 7091 COSMIC
COSN31549533 7106 COSMIC
COSN31590884 7181 COSMIC
COSN19256126 7606 COSMIC
COSN147562 7968 COSMIC
COSN31576073 8014 COSMIC
COSN25490880 8023 COSMIC
COSN31536929 8026 COSMIC
COSN31481271 8063 COSMIC
COSN24051109 8167 COSMIC
COSN20104442 8490 COSMIC
COSN32113734 8585 COSMIC
COSN17078210 8654 COSMIC
COSN8046959 8714 COSMIC
COSN9515964 8806 COSMIC
COSN8046958 8945 COSMIC
COSN28790315 9063 COSMIC
COSN31533199 9105 COSMIC
COSN30174674 9125 COSMIC
COSN23542405 9231 COSMIC
COSN31551298 9723 COSMIC
COSN31530606 9775 COSMIC
COSN31520162 9807 COSMIC
COSN26641424 9890 COSMIC
COSN24302070 9893 COSMIC
COSN19045576 9919 COSMIC
COSN30177077 9947 COSMIC
COSN31527918 9953 COSMIC
COSN30544527 10018 COSMIC
COSN21296063 10128 COSMIC
rs42039 32 GWAS
rs42038 735 GWAS
rs42377 782 GWAS
rs42035 4923 GWAS
rs42034 5310 GWAS
rs42033 6921 GWAS
rs42032 7028 GWAS
rs4272 7625 GWAS
rs8179 8290 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1159351348 1 dbSNP
rs755866968 1 dbSNP
rs1458517687 2 dbSNP
rs148281084 3 dbSNP
rs771828642 4 dbSNP
rs1311486311 9 dbSNP
rs1403539225 12 dbSNP
rs759159081 13 dbSNP
rs552347492 14 dbSNP
rs968533349 25 dbSNP
rs770520347 27 dbSNP
rs376588254 31 dbSNP
rs42039 32 dbSNP
rs1244821840 37 dbSNP
rs1164024775 40 dbSNP
rs770127111 42 dbSNP
rs1266735169 43 dbSNP
rs1416886247 45 dbSNP
rs1185608603 46 dbSNP
rs1489158248 47 dbSNP
rs1263733664 48 dbSNP
rs1215024771 51 dbSNP
rs901662004 54 dbSNP
rs929827849 55 dbSNP
rs895731319 56 dbSNP
rs1057102070 61 dbSNP
rs1459398499 64 dbSNP
rs1214168895 71 dbSNP
rs1040272068 73 dbSNP
rs183777994 74 dbSNP
rs1366811461 76 dbSNP
rs936962765 83 dbSNP
rs1164209241 84 dbSNP
rs1400720834 86 dbSNP
rs926972376 89 dbSNP
rs1329077277 92 dbSNP
rs978495655 95 dbSNP
rs1395271678 97 dbSNP
rs1396258004 123 dbSNP
rs1286257270 132 dbSNP
rs539873726 133 dbSNP
rs772029119 137 dbSNP
rs1233173616 138 dbSNP
rs1279438177 146 dbSNP
rs913016734 153 dbSNP
rs930434589 154 dbSNP
rs1217138417 156 dbSNP
rs574395087 158 dbSNP
rs1483668034 162 dbSNP
rs1319361232 163 dbSNP
rs988713409 169 dbSNP
rs191254857 170 dbSNP
rs759365180 178 dbSNP
rs976985640 183 dbSNP
rs773962925 192 dbSNP
rs1424193913 193 dbSNP
rs188317569 195 dbSNP
rs992417137 197 dbSNP
rs1018692274 200 dbSNP
rs1466223003 208 dbSNP
rs1304265174 224 dbSNP
rs935560138 225 dbSNP
rs1402232213 228 dbSNP
rs1298310854 233 dbSNP
rs924001877 234 dbSNP
rs1217349654 235 dbSNP
rs1295288049 236 dbSNP
rs1313220918 237 dbSNP
rs1235654040 244 dbSNP
rs979821309 247 dbSNP
rs3731389 261 dbSNP
rs1029513015 263 dbSNP
rs1265437588 263 dbSNP
rs952898681 286 dbSNP
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rs1311644102 1000 dbSNP
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rs552386414 1128 dbSNP
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rs1309703911 1216 dbSNP
rs549440877 1218 dbSNP
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rs138224572 1248 dbSNP
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rs77036956 1260 dbSNP
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rs931593584 1289 dbSNP
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rs560911959 1307 dbSNP
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rs544216612 1324 dbSNP
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rs878892771 1344 dbSNP
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rs1205841624 1366 dbSNP
rs1278243562 1366 dbSNP
rs759326814 1368 dbSNP
rs548927452 1375 dbSNP
rs1355665490 1379 dbSNP
rs1261176771 1386 dbSNP
rs774237508 1387 dbSNP
rs1203113259 1394 dbSNP
rs530860761 1401 dbSNP
rs980223253 1406 dbSNP
rs1433382481 1417 dbSNP
rs1195189347 1424 dbSNP
rs1392712596 1431 dbSNP
rs570222063 1441 dbSNP
rs1158731488 1443 dbSNP
rs1264821634 1447 dbSNP
rs970271775 1450 dbSNP
rs1288630949 1452 dbSNP
rs1391951419 1456 dbSNP
rs1242450261 1463 dbSNP
rs1443370128 1467 dbSNP
rs1342184239 1469 dbSNP
rs1301595042 1471 dbSNP
rs1370544216 1475 dbSNP
rs565153342 1480 dbSNP
rs1293754741 1489 dbSNP
rs1309274976 1504 dbSNP
rs1399135077 1509 dbSNP
rs1338034605 1511 dbSNP
rs1021460819 1517 dbSNP
rs990438633 1521 dbSNP
rs1215352932 1536 dbSNP
rs1400813659 1537 dbSNP
rs1467778587 1541 dbSNP
rs955946396 1550 dbSNP
rs911853472 1555 dbSNP
rs1031586704 1556 dbSNP
rs1409588522 1558 dbSNP
rs1417818426 1564 dbSNP
rs190512249 1573 dbSNP
rs901544133 1582 dbSNP
rs1161991346 1592 dbSNP
rs1459949289 1595 dbSNP
rs1324304143 1613 dbSNP
rs1393964765 1621 dbSNP
rs929398561 1630 dbSNP
rs920461801 1631 dbSNP
rs1371368015 1632 dbSNP
rs1221994090 1639 dbSNP
rs1017287173 1640 dbSNP
rs1007313559 1641 dbSNP
rs889920873 1643 dbSNP
rs1048550702 1644 dbSNP
rs573007662 1647 dbSNP
rs1335401711 1650 dbSNP
rs1234862860 1654 dbSNP
rs931513746 1661 dbSNP
rs1193444149 1671 dbSNP
rs1333678731 1678 dbSNP
rs1204827895 1680 dbSNP
rs897393142 1688 dbSNP
rs186046652 1697 dbSNP
rs148960964 1699 dbSNP
rs1176139414 1700 dbSNP
rs928636785 1703 dbSNP
rs1476488921 1704 dbSNP
rs1194115462 1717 dbSNP
rs1417654386 1733 dbSNP
rs980553496 1739 dbSNP
rs780389443 1740 dbSNP
rs948839838 1744 dbSNP
rs1451127109 1745 dbSNP
rs1172884793 1750 dbSNP
rs73710416 1751 dbSNP
rs1441487363 1765 dbSNP
rs989994332 1767 dbSNP
rs959703775 1780 dbSNP
rs1416598045 1781 dbSNP
rs1291178708 1782 dbSNP
rs1211713613 1785 dbSNP
rs1333976927 1809 dbSNP
rs1336911391 1813 dbSNP
rs1031335862 1830 dbSNP
rs1273716962 1839 dbSNP
rs999052477 1855 dbSNP
rs1203156613 1856 dbSNP
rs1280442893 1862 dbSNP
rs1486926484 1864 dbSNP
rs955893326 1869 dbSNP
rs1186470825 1874 dbSNP
rs1257245064 1888 dbSNP
rs1475914406 1894 dbSNP
rs1188667913 1896 dbSNP
rs1417592063 1902 dbSNP
rs1240834288 1903 dbSNP
rs1409633445 1920 dbSNP
rs1217811899 1921 dbSNP
rs1377395508 1922 dbSNP
rs879132207 1938 dbSNP
rs1436502346 1950 dbSNP
rs537835980 1958 dbSNP
rs975983593 1959 dbSNP
rs1354757826 1961 dbSNP
rs551975443 1970 dbSNP
rs1465763429 1973 dbSNP
rs1017280133 1974 dbSNP
rs763285050 1977 dbSNP
rs1430936822 1992 dbSNP
rs1330135216 1995 dbSNP
rs1213675951 1998 dbSNP
rs1321088859 1998 dbSNP
rs1303457449 2004 dbSNP
rs1007673524 2006 dbSNP
rs1387975340 2010 dbSNP
rs760795666 2043 dbSNP
rs1280167072 2049 dbSNP
rs1017813804 2051 dbSNP
rs1218326218 2082 dbSNP
rs951828719 2083 dbSNP
rs569238734 2084 dbSNP
rs1009068520 2092 dbSNP
rs1426136511 2094 dbSNP
rs773393615 2096 dbSNP
rs1168843794 2117 dbSNP
rs1477863178 2118 dbSNP
rs1245173705 2145 dbSNP
rs1201158374 2150 dbSNP
rs1401236667 2156 dbSNP
rs1468932607 2161 dbSNP
rs532040056 2166 dbSNP
rs1433894709 2167 dbSNP
rs760363690 2172 dbSNP
rs1372735387 2178 dbSNP
rs562510079 2187 dbSNP
rs559226165 2189 dbSNP
rs538930592 2191 dbSNP
rs1274924982 2196 dbSNP
rs1003129256 2205 dbSNP
rs907168193 2209 dbSNP
rs1044395011 2210 dbSNP
rs1343902061 2211 dbSNP
rs899233488 2217 dbSNP
rs748211537 2229 dbSNP
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rs369656591 2240 dbSNP
rs1214720469 2241 dbSNP
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rs776632282 2309 dbSNP
rs1322272801 2332 dbSNP
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rs1278231023 2368 dbSNP
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rs42036 3003 dbSNP
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rs1282238846 3155 dbSNP
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rs920556373 3222 dbSNP
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rs971564092 3323 dbSNP
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rs1478964079 3338 dbSNP
rs765456689 3340 dbSNP
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rs991707352 3349 dbSNP
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rs957856703 3388 dbSNP
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rs1274711511 3404 dbSNP
rs998802493 3405 dbSNP
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rs1266683833 3425 dbSNP
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rs909482683 3469 dbSNP
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rs1275572704 3515 dbSNP
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rs575288630 3560 dbSNP
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rs1276543443 3576 dbSNP
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rs565327825 3581 dbSNP
rs1293061528 3584 dbSNP
rs545057708 3590 dbSNP
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rs1415735166 3673 dbSNP
rs1315295361 3675 dbSNP
rs947789260 3678 dbSNP
rs528941183 3688 dbSNP
rs916374235 3697 dbSNP
rs1338903805 3700 dbSNP
rs553410556 3702 dbSNP
rs992050872 3710 dbSNP
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rs1226282328 3723 dbSNP
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rs1482702904 3731 dbSNP
rs1211309431 3733 dbSNP
rs957591826 3749 dbSNP
rs1258061284 3751 dbSNP
rs536910258 3755 dbSNP
rs1050701819 3757 dbSNP
rs574291113 3762 dbSNP
rs561701712 3768 dbSNP
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rs1166203348 3783 dbSNP
rs977661969 3786 dbSNP
rs768569481 3794 dbSNP
rs1461774550 3799 dbSNP
rs1304926532 3800 dbSNP
rs1400599060 3804 dbSNP
rs1395823010 3808 dbSNP
rs1319155191 3811 dbSNP
rs199837841 3815 dbSNP
rs147169612 3819 dbSNP
rs557710397 3819 dbSNP
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rs537187555 3853 dbSNP
rs1438159221 3855 dbSNP
rs1297029099 3872 dbSNP
rs878990609 3873 dbSNP
rs1341339402 3874 dbSNP
rs1233967689 3879 dbSNP
rs909346938 3885 dbSNP
rs1342539921 3889 dbSNP
rs1430003561 3890 dbSNP
rs571247608 3894 dbSNP
rs1008932315 3899 dbSNP
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rs953584259 3955 dbSNP
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rs937572830 3976 dbSNP
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rs775824490 3990 dbSNP
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rs1388602088 4011 dbSNP
rs1303229481 4026 dbSNP
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rs772551454 4035 dbSNP
rs1004804750 4049 dbSNP
rs1256620121 4051 dbSNP
rs1268581750 4060 dbSNP
rs1020802898 4064 dbSNP
rs906163941 4069 dbSNP
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rs779357175 4077 dbSNP
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rs548882353 4087 dbSNP
rs1265825228 4104 dbSNP
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rs1029508618 4136 dbSNP
rs576300247 4144 dbSNP
rs1373204986 4149 dbSNP
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rs557739945 4161 dbSNP
rs545596627 4165 dbSNP
rs912183058 4180 dbSNP
rs1321972624 4183 dbSNP
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rs780902504 4193 dbSNP
rs558385927 4207 dbSNP
rs1488439721 4220 dbSNP
rs1206579378 4225 dbSNP
rs377534098 4229 dbSNP
rs796433392 4232 dbSNP
rs1354775288 4237 dbSNP
rs1254616127 4241 dbSNP
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rs1396297724 4255 dbSNP
rs937605521 4257 dbSNP
rs994949700 4258 dbSNP
rs1457332823 4261 dbSNP
rs928885212 4266 dbSNP
rs963167699 4274 dbSNP
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rs995485119