miRTarBase - #MIRT003058


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pre-miRNA Information
pre-miRNA hsa-mir-144   
Genomic Coordinates chr17: 28861533 - 28861618
Description Homo sapiens miR-144 stem-loop
Comment This miRNA sequence is predicted based on homology to a verified miRNA from mouse .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-144-3p
Sequence 52| UACAGUAUAGAUGAUGUACU |71
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs947719319 4 dbSNP
rs917554219 5 dbSNP
rs1218721253 6 dbSNP
rs760366230 9 dbSNP
rs1293385306 15 dbSNP
rs1463482751 16 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PLAG1   
Synonyms PSA, SGPA, ZNF912
Description PLAG1 zinc finger
Transcript NM_001114634   
Other Transcripts NM_001114635 , NM_002655   
Expression
Putative miRNA Targets on PLAG1
3'UTR of PLAG1
(miRNA target sites are highlighted)		 
>PLAG1|NM_001114634|3'UTR
   1 GATTCTGGGACATGGATTCATTACAGAAATGTATGTGTAGCTGTGCCCTAGATGACCATTTTTATTTTAGTGCCTACTTT
  81 AAAACAGTATAAAAATTTCTGCTTTTGTATAATACAAATTTTCATTAAGCCAGTATAAAATAGAAACTAGCTTTTAAACT
 161 GAGCTTTGGAACCATTTGTGTTCAGTTAAGTTTACCTGGGTATTTTGTCCTGATTCACTGCCAATTGTCACATTTTAAGA
 241 CTTTTTTTTTTCCATATAGGAAAGCCATTATTAGTAGTAAACTTTTACAAATCCCATTTTCAAATTACTTTTAGATCTTA
 321 AAATTTTCATTTTTGTCTAATAACAGTGGCTCTACCTTTTGACATCTGGCTCATTAAAAAATTTAGCAATAGAATGTAAA
 401 TTGTATAAAAAGTTTGTGAATAACTCAAGGGTTTAAATTTTCTTACTAGCTTCTAAATGGATTAATAATCAAGTGCTTCA
 481 AATGAATTAAGAGTCCAGTTTCGGAAGATAATAAATGTTTGTTAGATACACCATAATTTCAGATCAGTATATTCTGAAGA
 561 CTCCCTGTTGTCTGGCTAAAATATTTGCCATCTTTATTATGAGCCTTTAAGGAAAACAAACCCTAAACACAAAGCATCAG
 641 TATTTATAGCAAAAAGAGACTCTGTTAGGTGACATGGCATTTCGTGTCACTTAATAGTTGGCCCTAAATTAGTACACAGG
 721 ATATTTTGTCGTGTTTCATCCTTCTTAACATGCTATCTTTTCATTTAATAATAGTAATAGTGTATGGCATTGGGGTCTTC
 801 AGAGTCGATATATAGGTAGATCTCTTTAGTCTTTTCCACCTTTCACATCCAAGGGGTGGGTCAAGTGCAGCCAGCAATTT
 881 ATTTTCATTGTTGGCCCACGGTTAGTCCATAATCTAGAGCCATTGTGGAACTGCAGCCATGAGGTGTGTTTATCCCACAG
 961 TGGATTGACTCAGCCTCTGTGGGTGACAGACTTCTAAGCAGGAAGATAGACGTGAAGCACATGGTTACATTTGGGAACTT
1041 GTGTAGGGATCATGGCCCCTGTAGCCAGGGTTAAAAACTGGACTTTTTAGAAGTAAAGTAAAAGCATATCGCTTATATCA
1121 TTTCTTGCTGAATTTGATATGTTTTTCTTTCCCTTAAGAATCAAAAGCAGAAAACAAAAACAACAGTCCTACTCCGATGT
1201 TATCTTTCTGATTCAATGTGAATCCATCTTTCCTTGCAATATTTTGGATGGAGAATTTGAAGTTAAATGCATTAGAAAAC
1281 TACCTGATGAACTACCACAAAGTTTTAAGTGACTAGAAATATATACAGTAAAATCCCACTTTCATGCATCTCTGGGAAAT
1361 GATAGGAGTATTGCAAATAAGTTGAGTTTGTAGAGGGTAACAAAGTAAAGTAAAACAAACCTATCTTGGTTAACATGAAA
1441 ATAACAATTGAGAATATATTATATTCACTGAATAATTATAGGCTTTTCCTCACATTAGACAACCAACATAATCTTCTTAA
1521 AGGTCTAATTAATATATTTTTCTAAGGGTCAGTTGGGACATTAACCTAAGAAACATATCTATTAAGCACTTGTTAACACC
1601 TTATTTTAGGACCCTTTCCGTTGGGGATGGGGGCAAGGGTGGGAGGTTTTTAGAAGAGTATATATCTCTTTAAAAAAAAA
1681 CAGAAAGAAAAATATTTCTGAGCACTCATTAGCCCTATATGGAAACTTCTTTCCTTTTTGTAGGGCCAGTTATCACTGCA
1761 GATTGCAATGTTTACCAAGAATTTCTAAAAATGAGTGCAGATTACTGAATATAATACATTATTTAAAATATTTGGGAGTA
1841 GTATAATTTGTGGAGAAATGTAAATTGTAATAATGTAAATGGGGGCTTCAATATATATATATAATACACACACACACACA
1921 CATGCACACATACCGCACTTCATAGAATCAAAGTTGCTCTCTGAAGGAGCTTTGGCTCCTGATATTTTATCATGCTCCTA
2001 TATTTTTTTAATCCTTGGAGCAGTAGTTTTTATACTTATGTATTTAAATTTTATTATGAAAAATTACATTTATTAAAAAA
2081 GTGTGTTCCAAAGGCATTAAAATTATATATGTTAATAAGGAAGTACATTTTTAAATTTTTCAAACTGCTCCTAGCTTTTG
2161 ATTAGGAGAATATTTTTTCTGAAAGTAGGCTTTTCGCTCTGCTTCATTACTGCTTCCTTTAGTTTCTATGAAACAGATTG
2241 CTTACCTAAATCTTTAGTTGAATGATTAGTGTTCAATATTGCTTTAATCACCATATAAAAGGAAAAAAATTGGTGACAGA
2321 GCACAAATAGAAAACCTATTTTTAAATAGAAATCACAAATAGCAAGTGTGGAAGCACTACTTTATTCTGTTTAAAATGTA
2401 CTTAAGAAGTCATCAAATTAGTGAACTGAGACATTGGCCTTAGTAGGCTGTATTCACTGCTAATTTAAAAAAGGGAGTAC
2481 CAGGATTTATTAAGTAAAGCATTTTGGAAATGGGGAATAGCGCCATATATGTATGTATGTGTATGTGTGTGTGTGTGTGT
2561 GTATATATACACACACACACACATACTTAAATCTTGCCCTGCATGAAATTCAAATACATGGAGGCACATCTTCAGGGCAC
2641 CAGTGTTAAAATTTTGGAGTCTTAATTTTCATGTGTACACCTCTTTGCCTGTTCCCACCCCCAGACTTGAAATAACACTT
2721 CAGAGTAAGAGGGAATTCAGCTAATTTGTTTTTAAAATTGACTGTAGTGGTCACTAAACCCTTTTTGAGAGAATTTCTAT
2801 TAAAGATGAGGCAGACTCGCTTATTTGAATTGCACAATGTTCTAACAAGGATGTAACACAGAATTGGCTTTTTTTTCCCT
2881 AGAAAAAGATTGTTTGTTTCTATGTCAACTAGATATGATTAAAAATAAGTATTGCCAATGCTGTTTTCATTCTCTAGTGG
2961 CCAGAATCATTATCCTTGAAATTTCTGGTAGTGCCTTAGCTTGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAGGGATTAA
3041 CATTAAATAAAAGTAGTTTAGAATTTGGGCCTCAGACAAGATATTGAACCTCATTCAGTTTCACTTCCACATGTATGTAC
3121 AAGTTAGGTCACCAAACACGGAAGTGTGAGTGTGGAAGGATCTTGGCACTGTAAGCAATGCTATCCATTGATGTATACAA
3201 GTACCTTTATAGTTATCGATCACTGTTAAAACTTTCATTTTAAAATCCTATTACCAAGTTCAGTTTTTTAAAACTTCAAT
3281 TGTCCTGGCTGATTATGCATCACTCTGTGTGCAACTTTTTTATTTCATTTAGTGTTTCTTTCAAGCTGTGTATTTTTGCC
3361 TATTTGTTGCTTGTGCTTTATTTTTCTTAGTCATTTGTGGAATATAGTGATATATTGTGTTAATTTGGACAGTAGCGGTT
3441 TTTAAAAACCATATACTGACTGAAACATGAGCCAGAGCCGATTGCTTTATTAAGCTAATAATGAATGTTAAAGAGTACAT
3521 ATTTTCAGGATCGTTCATCTAGTGAGCAATACACATATTATAGGCCAATATTTTTTTAAAAAATAGAGCTTGGTCAACCT
3601 CTATACTACACATATTACAAGATATAGCACTTTCAAAATGAATCTAAACCTTTACAGAAACTTTCTTATAGGTTATGCCT
3681 TTTATTTTAAGACTTATTATAATTCAAGTGCCATTAGATGATATATATGTAGGCCTTTGATATATAATGCTTTGTGTACA
3761 AAAATGGTAGATGGTATTTTAAACAGGTACATTTTTACAGTGTTTTCTTATCAATTTGCTATATTGCACAGAATCAGTGT
3841 GTGTCTTTTCATAAGGTTTTACAATGGTTTATTTTTTTACAAGGTTTACGTGTCTCAAAGCACACTGTCTTCCCAGTACG
3921 TAAGTTAAAAAATACCAGTTCACCCAAGTTGCTTCTAGCCTACTGAGATCCATGTGACATTGGAGGAGATCTTTTAAATG
4001 TTTAGTATTCGTCATTAGCAATGGCTGGCTGTTAGTTCTGGTAAATGTGTGCCTAAGTTGAATTTGTCTTGTTTTTCTCA
4081 CACTGTGTCAGCAGCCATGTCTACAACACAGATAAGTCTGTTGTGATCACATAGATCTACATAAGTTGTGCAGTTTTGTG
4161 CTAAAAACCCATAGGGAGCTCCTTTGGGATCATAGAAAAGAAGATCATGCAACCAGCATTGGTGAAGGCACACTCAGATT
4241 GCACTTAGGGCCTTTCTATGATGTTGTCAACCCTCTGAGGATGGAAGGCAGTGTCTTTTGATGTTATCTAGCCTAGAAAT
4321 GACACAGAACTATTGCTAATGTATAAAACACTTCATTATATAAGCTTCAGTGGTACAGATGAACCAGAATGAATGTTTAT
4401 CTTCTCAGAAACACTCCTTCAATATTATATTGGATCATGCTGCTAATGTAACTTGGGCTACAACTCTTCATGGTGCTACA
4481 AACTTCTCTGTCTCATTCAGTCGTATTTTTTTATCCATAGAAAAAGGACTACATTAGGTGTAAAAGTGTACAATATATTT
4561 TTATACTGTGACTTAATTTGTCATTAACAAACTTTTACACCACCACAATGTATTCATGTGCACTTGCAAAAGGAGATCTC
4641 GGACATGCAAATGTTACCAGAACAAACCCAGCTTTTGTCCACAAGGTGACTGTAACTCAGAATGGAAAGTGGGCTTTATA
4721 ATAGGGTGTGGAGTGAAGAACATGCTGTATGTTACTAACAGCCCTTTGAATTTAACAAAAACTGGGAATCCATTAGGAAA
4801 CGGATTGCATCATACCTGAACATAAGCTGGACTGCTGAAATTGTATTTTTAGCTAATGAAAAAGTGTTTGGACTAGTACT
4881 CTAAAAATGTTCTAATGATAAAGTTTTGAGTCAAAATAGAAAAGAAAAAAATCTGCATTCCAGGCCGAATTTTGTATATT
4961 TTTATTGCATTTAAAATTGCTATTCTGTAATATTGGGAAATCAAGTGGCTTATCATGTATATCGTGTACTTAAAATGTAT
5041 TCACAAACTACTGTTGTATTTGTATAAAATATAGACAAAGATCATATTTTTTGTGTGTGTATAAGCTCTGTAAAATAGCA
5121 ATCACATTATGAAGCTGCAGTGATACTACATTTTAAACATTCACATCCAAAGAAGCAGACTATTTATTGTCCATATACCA
5201 GATTTAAAATATTAATTTGCTGCTAATTAAATAATAGTACTGCAGCTTCTTGTGGCCTACAGTGTTATGTTTGCTGTAAG
5281 AATAAGATATGTGAATTCCACAAAATATATGAATAAAATTATAGAATGGCTTTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucAUGUAGUAGAUAUGACAu 5'
            ||:||: |:|||||||| 
Target 5' aaTATATT-TTTATACTGTg 3'
 4552 - 4570 165.00 -13.40
2 
miRNA  3' ucaUGUAGUAGAUAUGACAu 5'
             ::||:: | ||:|||| 
Target 5' taaGTATTGCCAATGCTGTt 3'
 2926 - 2945 137.00 -8.60
3 
miRNA  3' ucaUGUAGUA-GAUAUGACAu 5'
             |:|| :|  ||||:||| 
Target 5' ggaATATAGTGATATATTGTg 3'
 3399 - 3419 137.00 -8.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN510063 19 COSMIC
COSN30109995 31 COSMIC
COSN5865225 32 COSMIC
COSN31550831 33 COSMIC
COSN30103325 36 COSMIC
COSN2281276 39 COSMIC
COSN26989305 56 COSMIC
COSN31529263 66 COSMIC
COSN30100442 76 COSMIC
COSN31542155 99 COSMIC
COSN20123585 103 COSMIC
COSN1366243 242 COSMIC
COSN16963509 344 COSMIC
COSN9661385 501 COSMIC
COSN20244098 502 COSMIC
COSN5684209 832 COSMIC
COSN17827170 1012 COSMIC
COSN17182765 1193 COSMIC
COSN28541439 1196 COSMIC
COSN30172842 1493 COSMIC
COSN31549555 1540 COSMIC
COSN20822952 1573 COSMIC
COSN31557544 1574 COSMIC
COSN31486924 1620 COSMIC
COSN29607803 1671 COSMIC
COSN30539071 1671 COSMIC
COSN4940734 1697 COSMIC
COSN31523552 1843 COSMIC
COSN16296047 1905 COSMIC
COSN20105503 1905 COSMIC
COSN28152407 1906 COSMIC
COSN31546676 2139 COSMIC
COSN31547888 2195 COSMIC
COSN31568488 2226 COSMIC
COSN31522014 2302 COSMIC
COSN26174914 2303 COSMIC
COSN31962962 2355 COSMIC
COSN9661383 2356 COSMIC
COSN26581579 2483 COSMIC
COSN31540918 2521 COSMIC
COSN31514783 2543 COSMIC
COSN31535855 2543 COSMIC
COSN29743145 2544 COSMIC
COSN31569273 2553 COSMIC
COSN30175289 2559 COSMIC
COSN28671911 2561 COSMIC
COSN8092111 2563 COSMIC
COSN30176746 2568 COSMIC
COSN28106721 2569 COSMIC
COSN31518509 2570 COSMIC
COSN21627586 2604 COSMIC
COSN31570706 2683 COSMIC
COSN31563318 2702 COSMIC
COSN29665705 2752 COSMIC
COSN31491210 2754 COSMIC
COSN31547126 2821 COSMIC
COSN9661382 2859 COSMIC
COSN20855198 2934 COSMIC
COSN31532475 3007 COSMIC
COSN31561905 3032 COSMIC
COSN26574036 3033 COSMIC
COSN9661381 3211 COSMIC
COSN31568475 3217 COSMIC
COSN31483073 3261 COSMIC
COSN30165088 3307 COSMIC
COSN31549556 3338 COSMIC
COSN30169605 3400 COSMIC
COSN31778698 3436 COSMIC
COSN30543346 3437 COSMIC
COSN30162406 3480 COSMIC
COSN30544485 3577 COSMIC
COSN26589364 3578 COSMIC
COSN31523560 3648 COSMIC
COSN2281275 3709 COSMIC
COSN4940733 3739 COSMIC
COSN31547104 3750 COSMIC
COSN21520082 3780 COSMIC
COSN6699965 3839 COSMIC
COSN31519048 3845 COSMIC
COSN20105500 3871 COSMIC
COSN26550803 3903 COSMIC
COSN31548709 3905 COSMIC
COSN17078614 4118 COSMIC
COSN23582919 4144 COSMIC
COSN23066532 4200 COSMIC
COSN21143837 4224 COSMIC
COSN17182034 4264 COSMIC
COSN24302584 4322 COSMIC
COSN27776282 4323 COSMIC
COSN2281274 4425 COSMIC
COSN9661380 4502 COSMIC
COSN19330471 4505 COSMIC
COSN31550843 4550 COSMIC
COSN30543172 4797 COSMIC
COSN27073150 4897 COSMIC
COSN31539657 4928 COSMIC
COSN31529840 4962 COSMIC
COSN31517917 5023 COSMIC
COSN22109803 5024 COSMIC
COSN31531346 5064 COSMIC
COSN31544355 5108 COSMIC
rs34715615 3871 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs759676950 2 dbSNP
rs774529289 5 dbSNP
rs1372913133 6 dbSNP
rs1164267320 8 dbSNP
rs770946747 12 dbSNP
rs534097674 15 dbSNP
rs1396820444 19 dbSNP
rs1357819187 27 dbSNP
rs1430765797 30 dbSNP
rs904239542 30 dbSNP
rs754956552 32 dbSNP
rs764795534 35 dbSNP
rs768369873 41 dbSNP
rs1010292003 44 dbSNP
rs1188878067 45 dbSNP
rs1306238253 46 dbSNP
rs746870540 48 dbSNP
rs1213365599 58 dbSNP
rs1442779392 71 dbSNP
rs1299685771 82 dbSNP
rs892730014 87 dbSNP
rs1227386891 89 dbSNP
rs1315380704 92 dbSNP
rs1361126685 96 dbSNP
rs544620120 107 dbSNP
rs1273237996 108 dbSNP
rs1307449996 118 dbSNP
rs575754603 125 dbSNP
rs1205768541 130 dbSNP
rs565363193 133 dbSNP
rs1040631443 135 dbSNP
rs1440434087 137 dbSNP
rs1369062735 140 dbSNP
rs545513736 154 dbSNP
rs1447278416 159 dbSNP
rs1446637664 162 dbSNP
rs1166827917 165 dbSNP
rs573329399 168 dbSNP
rs553547953 174 dbSNP
rs1410473812 176 dbSNP
rs911820184 177 dbSNP
rs1357349633 183 dbSNP
rs1447082505 184 dbSNP
rs1337116642 188 dbSNP
rs1384589584 190 dbSNP
rs986414594 198 dbSNP
rs944938890 199 dbSNP
rs910759541 202 dbSNP
rs1215812018 217 dbSNP
rs1050544914 220 dbSNP
rs146219331 224 dbSNP
rs573999721 227 dbSNP
rs1264100604 236 dbSNP
rs1462840082 243 dbSNP
rs75628621 245 dbSNP
rs60449229 246 dbSNP
rs1188337941 252 dbSNP
rs1241597508 252 dbSNP
rs57439758 252 dbSNP
rs796699592 252 dbSNP
rs1423025997 266 dbSNP
rs1239643362 273 dbSNP
rs1180854764 281 dbSNP
rs962770461 282 dbSNP
rs1455324102 283 dbSNP
rs1015664726 285 dbSNP
rs1326644105 288 dbSNP
rs920635386 290 dbSNP
rs982964020 303 dbSNP
rs972105350 308 dbSNP
rs754010470 318 dbSNP
rs1366149501 329 dbSNP
rs971940548 346 dbSNP
rs1024564867 350 dbSNP
rs1326014291 360 dbSNP
rs1207210431 361 dbSNP
rs1283894779 363 dbSNP
rs74568212 372 dbSNP
rs1218079514 373 dbSNP
rs1245005869 379 dbSNP
rs570941502 383 dbSNP
rs141959330 390 dbSNP
rs999792696 396 dbSNP
rs1157757035 403 dbSNP
rs1385268683 403 dbSNP
rs902952377 405 dbSNP
rs1041414049 407 dbSNP
rs1233682101 410 dbSNP
rs1348734759 416 dbSNP
rs572006436 428 dbSNP
rs1311783081 431 dbSNP
rs1226989306 435 dbSNP
rs1279298326 436 dbSNP
rs1351700612 440 dbSNP
rs1224585057 461 dbSNP
rs761292017 466 dbSNP
rs1225623655 487 dbSNP
rs1372317633 491 dbSNP
rs999993007 501 dbSNP
rs968514424 502 dbSNP
rs565702252 503 dbSNP
rs1223308563 505 dbSNP
rs1271028331 511 dbSNP
rs374933271 524 dbSNP
rs534374241 524 dbSNP
rs1009973846 529 dbSNP
rs75384951 531 dbSNP
rs941314945 533 dbSNP
rs529154613 545 dbSNP
rs563571226 553 dbSNP
rs1311692179 556 dbSNP
rs773730605 558 dbSNP
rs1304405300 561 dbSNP
rs867486724 578 dbSNP
rs1432360486 583 dbSNP
rs908637277 588 dbSNP
rs767825503 594 dbSNP
rs982828173 600 dbSNP
rs1444814770 610 dbSNP
rs971631019 618 dbSNP
rs917389898 620 dbSNP
rs193197511 621 dbSNP
rs1418203406 624 dbSNP
rs1407704352 639 dbSNP
rs991777462 644 dbSNP
rs187474696 650 dbSNP
rs1439411934 661 dbSNP
rs1175849714 666 dbSNP
rs1484494364 668 dbSNP
rs149893654 674 dbSNP
rs1242196904 675 dbSNP
rs1444824016 683 dbSNP
rs183507966 684 dbSNP
rs752821516 694 dbSNP
rs538130901 697 dbSNP
rs1167919043 700 dbSNP
rs999825446 711 dbSNP
rs1288311526 715 dbSNP
rs1335106915 728 dbSNP
rs535270482 730 dbSNP
rs930779272 731 dbSNP
rs573297706 733 dbSNP
rs1317267376 738 dbSNP
rs115512007 740 dbSNP
rs753293903 744 dbSNP
rs1226780079 747 dbSNP
rs940783475 750 dbSNP
rs917292027 755 dbSNP
rs1198556627 769 dbSNP
rs549417499 773 dbSNP
rs1292563496 775 dbSNP
rs1412907588 782 dbSNP
rs1361879759 783 dbSNP
rs1427473535 784 dbSNP
rs1193251303 787 dbSNP
rs1374190676 787 dbSNP
rs1463941742 788 dbSNP
rs958615898 792 dbSNP
rs1174752116 795 dbSNP
rs1289007440 797 dbSNP
rs927173126 803 dbSNP
rs1339018939 806 dbSNP
rs140197300 807 dbSNP
rs1381769549 810 dbSNP
rs1296349081 812 dbSNP
rs1157319308 813 dbSNP
rs1328154010 822 dbSNP
rs1425960974 824 dbSNP
rs1419085637 827 dbSNP
rs1324090010 828 dbSNP
rs996000934 828 dbSNP
rs1474547315 832 dbSNP
rs968983357 842 dbSNP
rs557213685 843 dbSNP
rs537374458 856 dbSNP
rs577187758 859 dbSNP
rs557748001 869 dbSNP
rs941345973 872 dbSNP
rs1430819720 877 dbSNP
rs190913752 883 dbSNP
rs1224105665 892 dbSNP
rs57103486 899 dbSNP
rs1343692783 909 dbSNP
rs950157372 910 dbSNP
rs1289538513 919 dbSNP
rs185367313 923 dbSNP
rs1302538266 925 dbSNP
rs1346050300 933 dbSNP
rs1225161461 944 dbSNP
rs763582058 946 dbSNP
rs995083040 947 dbSNP
rs1381187032 960 dbSNP
rs899369678 964 dbSNP
rs1489674363 968 dbSNP
rs1036524663 983 dbSNP
rs1359384035 991 dbSNP
rs1294894028 996 dbSNP
rs940782184 1003 dbSNP
rs1202081795 1008 dbSNP
rs1395657198 1011 dbSNP
rs1418729145 1012 dbSNP
rs1164740786 1021 dbSNP
rs745756342 1023 dbSNP
rs535635796 1024 dbSNP
rs781309525 1044 dbSNP
rs569895037 1046 dbSNP
rs954634959 1048 dbSNP
rs1427958533 1052 dbSNP
rs979107752 1053 dbSNP
rs1372255777 1055 dbSNP
rs947320004 1057 dbSNP
rs1193118854 1065 dbSNP
rs1469124784 1066 dbSNP
rs1356795363 1068 dbSNP
rs550071782 1093 dbSNP
rs563309254 1108 dbSNP
rs533282906 1110 dbSNP
rs913090600 1111 dbSNP
rs557237500 1112 dbSNP
rs1231669456 1116 dbSNP
rs1251852926 1116 dbSNP
rs571511725 1118 dbSNP
rs1178119628 1119 dbSNP
rs1252981210 1120 dbSNP
rs965101688 1124 dbSNP
rs1442967435 1127 dbSNP
rs1037663630 1137 dbSNP
rs1004798042 1139 dbSNP
rs1426476574 1141 dbSNP
rs1019297983 1162 dbSNP
rs887128631 1168 dbSNP
rs1305237915 1172 dbSNP
rs1462349055 1181 dbSNP
rs1299638591 1186 dbSNP
rs1302849242 1189 dbSNP
rs1380160650 1195 dbSNP
rs114284204 1196 dbSNP
rs1315147810 1200 dbSNP
rs151081651 1202 dbSNP
rs1212282853 1207 dbSNP
rs895895224 1216 dbSNP
rs1307397913 1217 dbSNP
rs1026606266 1224 dbSNP
rs73594274 1225 dbSNP
rs1260345906 1230 dbSNP
rs1439202878 1232 dbSNP
rs1460165572 1236 dbSNP
rs937549400 1248 dbSNP
rs1243969316 1267 dbSNP
rs1473848191 1272 dbSNP
rs1184829822 1274 dbSNP
rs1418762489 1274 dbSNP
rs73594272 1278 dbSNP
rs1461972402 1292 dbSNP
rs1403556069 1294 dbSNP
rs1469099380 1299 dbSNP
rs1371400076 1311 dbSNP
rs1015512304 1312 dbSNP
rs1407818140 1322 dbSNP
rs1269043256 1342 dbSNP
rs979011808 1343 dbSNP
rs946284043 1347 dbSNP
rs142929953 1348 dbSNP
rs1175601363 1362 dbSNP
rs1005030012 1368 dbSNP
rs1444310281 1379 dbSNP
rs11993194 1381 dbSNP
rs74854827 1386 dbSNP
rs895919250 1391 dbSNP
rs1057264947 1394 dbSNP
rs1213771324 1397 dbSNP
rs778992271 1403 dbSNP
rs1241542396 1405 dbSNP
rs937389445 1406 dbSNP
rs1195843918 1414 dbSNP
rs1454827470 1415 dbSNP
rs905899253 1420 dbSNP
rs1480016922 1421 dbSNP
rs1176849530 1423 dbSNP
rs1431019679 1433 dbSNP
rs1398546653 1447 dbSNP
rs563560185 1450 dbSNP
rs1317041791 1476 dbSNP
rs1252631762 1479 dbSNP
rs1432279563 1480 dbSNP
rs987556481 1481 dbSNP
rs1300646832 1488 dbSNP
rs1344146334 1489 dbSNP
rs1043052288 1493 dbSNP
rs1029163561 1503 dbSNP
rs947299315 1504 dbSNP
rs1347422697 1514 dbSNP
rs1222219945 1516 dbSNP
rs913108972 1531 dbSNP
rs15584 1536 dbSNP
rs543672619 1542 dbSNP
rs989068060 1556 dbSNP
rs1195146178 1557 dbSNP
rs1218859070 1560 dbSNP
rs943844106 1561 dbSNP
rs1266736838 1573 dbSNP
rs912377692 1577 dbSNP
rs1479656353 1581 dbSNP
rs182635843 1582 dbSNP
rs953788245 1587 dbSNP
rs919594625 1588 dbSNP
rs1248183328 1589 dbSNP
rs1468288685 1596 dbSNP
rs973727835 1600 dbSNP
rs139723624 1609 dbSNP
rs1408243769 1609 dbSNP
rs755266261 1612 dbSNP
rs1364284707 1619 dbSNP
rs541017265 1620 dbSNP
rs1304144784 1637 dbSNP
rs1241930903 1639 dbSNP
rs1004691959 1643 dbSNP
rs1333122543 1646 dbSNP
rs1440454253 1651 dbSNP
rs1330048488 1662 dbSNP
rs1005126780 1680 dbSNP
rs199621845 1681 dbSNP
rs767723499 1691 dbSNP
rs960217756 1692 dbSNP
rs886367541 1694 dbSNP
rs1358662580 1698 dbSNP
rs1291935574 1705 dbSNP
rs1435920193 1708 dbSNP
rs1180791272 1712 dbSNP
rs745969739 1713 dbSNP
rs1233138688 1720 dbSNP
rs1441112715 1729 dbSNP
rs1035855218 1740 dbSNP
rs1001651634 1742 dbSNP
rs905912217 1744 dbSNP
rs1164408336 1748 dbSNP
rs1393489281 1768 dbSNP
rs1394601870 1770 dbSNP
rs1408613740 1778 dbSNP
rs1024857081 1787 dbSNP
rs1377957220 1792 dbSNP
rs1014671964 1795 dbSNP
rs1471314997 1797 dbSNP
rs1364157928 1800 dbSNP
rs571987335 1802 dbSNP
rs1043453428 1807 dbSNP
rs1267194893 1812 dbSNP
rs1337329641 1829 dbSNP
rs1195037350 1835 dbSNP
rs1056317018 1842 dbSNP
rs1417174507 1855 dbSNP
rs1011552661 1859 dbSNP
rs937413596 1875 dbSNP
rs904723623 1876 dbSNP
rs1444767920 1879 dbSNP
rs1188983584 1883 dbSNP
rs753838503 1884 dbSNP
rs1043224918 1889 dbSNP
rs1474686051 1889 dbSNP
rs1167714659 1890 dbSNP
rs1401398757 1890 dbSNP
rs1467511163 1891 dbSNP
rs1335043298 1892 dbSNP
rs1405590083 1895 dbSNP
rs1485045759 1899 dbSNP
rs1226530430 1904 dbSNP
rs1270555312 1905 dbSNP
rs1277644076 1907 dbSNP
rs946190565 1909 dbSNP
rs1221451719 1910 dbSNP
rs1262165610 1915 dbSNP
rs200260560 1922 dbSNP
rs891719089 1922 dbSNP
rs145284198 1923 dbSNP
rs1491080904 1923 dbSNP
rs555036795 1923 dbSNP
rs573586591 1923 dbSNP
rs987702825 1923 dbSNP
rs1491339905 1924 dbSNP
rs1280443789 1926 dbSNP
rs1238802527 1928 dbSNP
rs933022279 1930 dbSNP
rs146386822 1935 dbSNP
rs780132826 1938 dbSNP
rs1298795909 1940 dbSNP
rs974521188 1942 dbSNP
rs963139369 1949 dbSNP
rs943956888 1950 dbSNP
rs1282346096 1951 dbSNP
rs1311214886 1959 dbSNP
rs191182522 1965 dbSNP
rs1385963680 1974 dbSNP
rs983289412 1977 dbSNP
rs1460085884 1978 dbSNP
rs535566137 1981 dbSNP
rs781384987 1985 dbSNP
rs950490917 1988 dbSNP
rs1157733331 1989 dbSNP
rs1489531926 1997 dbSNP
rs1025349711 2010 dbSNP
rs1197737890 2010 dbSNP
rs1049518075 2013 dbSNP
rs1013495469 2016 dbSNP
rs932407669 2017 dbSNP
rs919664932 2039 dbSNP
rs1362263456 2051 dbSNP
rs960343265 2058 dbSNP
rs1451317964 2063 dbSNP
rs974160454 2066 dbSNP
rs1159288692 2070 dbSNP
rs1362402480 2075 dbSNP
rs1034336148 2081 dbSNP
rs961102275 2082 dbSNP
rs1474877880 2083 dbSNP
rs1368124236 2091 dbSNP
rs1388285754 2097 dbSNP
rs1304483861 2106 dbSNP
rs569831572 2109 dbSNP
rs1240274652 2120 dbSNP
rs1194707966 2123 dbSNP
rs1356481798 2159 dbSNP
rs1220816427 2161 dbSNP
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rs1248724537 2169 dbSNP
rs1489044128 2169 dbSNP
rs1418674136 2177 dbSNP
rs983741669 2185 dbSNP
rs960268189 2188 dbSNP
rs1283153848 2195 dbSNP
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rs1422821293 2214 dbSNP
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rs887471512 2990 dbSNP
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rs756129133 3216 dbSNP
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rs1391193599 5266 dbSNP
rs1308073757 5267 dbSNP
rs1297109290 5268 dbSNP
rs910979770 5269 dbSNP
rs1352170030 5276 dbSNP
rs1297641518 5290 dbSNP
rs985197243 5291 dbSNP
rs1249571156 5292 dbSNP
rs1226537167 5300 dbSNP
rs1196300144 5304 dbSNP
rs908888276 5307 dbSNP
rs745671816 5308 dbSNP
rs984826017 5323 dbSNP
rs1372896054 5331 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Location of target site 3'UTR
Article - Zhang X; Cairns M; Rose B; O'Brien C; et al.
- International journal of cancer, 2009
Genome-wide microRNA (miRNA) expression profiling of salivary gland pleomorphic adenomas revealed a distinct expression signature consisting largely of upregulated miRNAs compared with matched normal tissue. Microarray data were confirmed by quantitative real time RT-PCR (q-RTPCR). Five miRNA genes upregulated in the tumours were found in close proximity to fragile sites and/or cancer associated genomic regions. Interestingly, q-RTPCR revealed an increase in the expression of components of the miRNA processing machinery (Dicer, Drosha, DGCR8 and p68) in tumours suggesting that the deregulation of miRNA expression may result from increased miRNA biogenesis. Target gene prediction analysis of the altered miRNAs indicated that genes in a number of signalling pathways important in tumourigenesis including WNT, MAPK and JAK-STAT were overrepresented. Significantly, the oncogene PLAG1 was overexpressed in our cohort and may be potentially regulated by these miRNAs. This is the first study to examine changes in the miRNA milieu in pleomorphic adenoma, the most common salivary gland tumour. This study has demonstrated an upregulation of both miRNAs genes and an upregulation of the miRNA processing machinery. These changes may be potential underlying mechanisms for the development of these benign tumours.
LinkOut: [PMID: 19347935]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE21849 B cell lymphoma -0.476 4.5e-3 -0.231 1.1e-1 29 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.552 5.8e-3 0.677 5.2e-4 20 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.88 2.4e-2 1.000 5.0e-1 5 Click to see details
GSE32688 Pancreatic cancer 0.288 5.5e-2 0.326 3.4e-2 32 Click to see details
GSE42095 Differentiated embryonic stem cells 0.327 6.4e-2 0.078 3.6e-1 23 Click to see details
GSE19783 ER- ER- breast cancer -0.128 1.3e-1 -0.136 1.2e-1 79 Click to see details
GSE19536 Breast cancer -0.109 1.4e-1 -0.105 1.5e-1 100 Click to see details
GSE14794 Lymphoblastoid cells 0.108 1.6e-1 0.084 2.2e-1 90 Click to see details
GSE19350 CNS germ cell tumors 0.314 1.6e-1 -0.098 3.8e-1 12 Click to see details
GSE38226 Liver fibrosis 0.224 1.6e-1 0.178 2.2e-1 21 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.179 2.0e-1 0.269 9.7e-2 25 Click to see details
GSE26953 Aortic valvular endothelial cells 0.178 2.0e-1 0.152 2.4e-1 24 Click to see details
GSE17306 Multiple myeloma 0.098 2.5e-1 0.258 3.7e-2 49 Click to see details
GSE19783 ER+ ER+ breast cancer -0.158 2.5e-1 -0.161 2.5e-1 20 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.127 2.7e-1 -0.297 7.5e-2 25 Click to see details
GSE21687 Ependynoma primary tumors 0.073 2.8e-1 0.149 1.2e-1 64 Click to see details
GSE28260 Renal cortex and medulla 0.138 3.3e-1 0.291 1.7e-1 13 Click to see details
GSE17498 Multiple myeloma 0.058 3.6e-1 0.142 1.9e-1 40 Click to see details
GSE27834 Pluripotent stem cells 0.085 3.8e-1 -0.009 4.9e-1 16 Click to see details
GSE28544 Breast cancer 0.055 4.0e-1 0.112 3.0e-1 24 Click to see details
GSE21032 Prostate cancer 0.023 4.2e-1 0.041 3.6e-1 83 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KIRC -0.301 0.01 -0.251 0.02 68 Click to see details
HNSC -0.336 0.01 -0.276 0.04 42 Click to see details
UCEC 0.508 0.02 0.544 0.01 18 Click to see details
PAAD 0.958 0.02 0.800 0.1 4 Click to see details
PRAD 0.279 0.03 0.322 0.01 48 Click to see details
CESC -0.995 0.03 -1.000 0.5 3 Click to see details
LIHC 0.251 0.04 0.190 0.1 49 Click to see details
CHOL 0.419 0.13 0.383 0.15 9 Click to see details
PCPG 0.846 0.18 1.000 0.5 3 Click to see details
STAD 0.127 0.24 0.201 0.13 32 Click to see details
BRCA 0.072 0.27 -0.001 0.5 74 Click to see details
KIRP -0.106 0.28 -0.061 0.37 32 Click to see details
LUSC 0.081 0.31 0.148 0.19 38 Click to see details
BLCA -0.123 0.32 -0.006 0.49 16 Click to see details
LUAD -0.113 0.36 0.042 0.45 12 Click to see details
ESCA -0.098 0.39 -0.055 0.44 11 Click to see details
KICH 0.06 0.39 -0.072 0.37 25 Click to see details
THCA -0.02 0.44 0.034 0.4 59 Click to see details
THCA -0.02 0.44 0.034 0.4 59 Click to see details
THCA -0.02 0.44 0.034 0.4 59 Click to see details
204 hsa-miR-144-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT003058 PLAG1 PLAG1 zinc finger 2 1
MIRT005523 FGG fibrinogen gamma chain 2 1
MIRT005529 FGA fibrinogen alpha chain 2 1
MIRT005530 FGB fibrinogen beta chain 2 1
MIRT005869 NOTCH1 notch 1 4 2
MIRT006114 TGFB1 transforming growth factor beta 1 4 1
MIRT006872 MTOR mechanistic target of rapamycin kinase 7 3
MIRT007190 PTEN phosphatase and tensin homolog 3 1
MIRT007310 NFE2L2 nuclear factor, erythroid 2 like 2 1 1
MIRT053494 ZFX zinc finger protein, X-linked 6 5
MIRT054058 CFTR cystic fibrosis transmembrane conductance regulator 2 1
MIRT054851 TTN titin 3 1
MIRT057677 LCOR ligand dependent nuclear receptor corepressor 2 8
MIRT065418 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT066720 CCT2 chaperonin containing TCP1 subunit 2 2 6
MIRT066784 ARID1A AT-rich interaction domain 1A 2 2
MIRT067387 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 4
MIRT068846 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT069645 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT069657 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT071717 CCNK cyclin K 2 2
MIRT073564 NR2F2 nuclear receptor subfamily 2 group F member 2 2 4
MIRT080720 ZCCHC2 zinc finger CCHC-type containing 2 2 4
MIRT090617 PLS1 plastin 1 2 2
MIRT097062 TNPO1 transportin 1 2 4
MIRT102618 UBN2 ubinuclein 2 2 4
MIRT118769 FAM217B family with sequence similarity 217 member B 2 6
MIRT147282 KPNA2 karyopherin subunit alpha 2 2 10
MIRT159513 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT196438 TAOK1 TAO kinase 1 2 2
MIRT211238 FGF2 fibroblast growth factor 2 2 2
MIRT220422 MKLN1 muskelin 1 2 2
MIRT223668 FZD6 frizzled class receptor 6 2 6
MIRT223805 OXR1 oxidation resistance 1 2 2
MIRT238585 NLN neurolysin 2 2
MIRT238652 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT247188 BTG2 BTG anti-proliferation factor 2 2 6
MIRT249185 AKIRIN1 akirin 1 2 8
MIRT252653 LSM14A LSM14A, mRNA processing body assembly factor 2 4
MIRT305624 MBNL1 muscleblind like splicing regulator 1 2 2
MIRT315671 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 6
MIRT366555 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT403294 ZNF207 zinc finger protein 207 2 2
MIRT405966 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT437437 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 5 1
MIRT438343 MET MET proto-oncogene, receptor tyrosine kinase 5 1
MIRT444395 ZNF480 zinc finger protein 480 2 2
MIRT445255 SEMA5A semaphorin 5A 2 2
MIRT445309 MLANA melan-A 2 2
MIRT449020 ANKRD12 ankyrin repeat domain 12 2 2
MIRT452136 NDUFC2-KCTD14 NDUFC2-KCTD14 readthrough 2 2
MIRT459438 PPIC peptidylprolyl isomerase C 2 2
MIRT460471 MMS22L MMS22 like, DNA repair protein 2 2
MIRT461294 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 2 2
MIRT462948 ZNF800 zinc finger protein 800 2 12
MIRT463489 ZC3H11A zinc finger CCCH-type containing 11A 2 12
MIRT463846 WRN Werner syndrome RecQ like helicase 2 2
MIRT466183 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466882 STX16 syntaxin 16 2 2
MIRT468156 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT468259 SFXN4 sideroflexin 4 2 2
MIRT469660 RAC1 Rac family small GTPase 1 2 10
MIRT470040 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT470552 COASY Coenzyme A synthase 2 2
MIRT472208 NGFRAP1 brain expressed X-linked 3 2 4
MIRT472555 NACC1 nucleus accumbens associated 1 2 4
MIRT473462 MCL1 MCL1, BCL2 family apoptosis regulator 2 2
MIRT473925 LYSMD3 LysM domain containing 3 2 4
MIRT474068 LMNB2 lamin B2 2 2
MIRT475079 ITSN2 intersectin 2 2 4
MIRT475286 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475570 HNRNPF heterogeneous nuclear ribonucleoprotein F 2 2
MIRT477516 ELL2 elongation factor for RNA polymerase II 2 2 2
MIRT478464 DAB2 DAB2, clathrin adaptor protein 2 2
MIRT478920 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT479338 CERK ceramide kinase 2 2
MIRT480578 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT480915 BCL2L11 BCL2 like 11 4 3
MIRT481532 ARL5B ADP ribosylation factor like GTPase 5B 2 8
MIRT481681 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 2 2
MIRT481724 APPBP2 amyloid beta precursor protein binding protein 2 2 6
MIRT481938 ANKRD11 ankyrin repeat domain 11 2 12
MIRT487099 C2orf44 WD repeat and coiled coil containing 2 2
MIRT489294 RBM8A RNA binding motif protein 8A 2 8
MIRT492255 SLC35F5 solute carrier family 35 member F5 2 2
MIRT493268 MAP3K4 mitogen-activated protein kinase kinase kinase 4 2 2
MIRT494770 AP1G1 adaptor related protein complex 1 gamma 1 subunit 2 2
MIRT496257 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT497713 ZNF645 zinc finger protein 645 2 2
MIRT498027 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT499292 TSPYL1 TSPY like 1 2 2
MIRT500105 SLC46A3 solute carrier family 46 member 3 2 2
MIRT501020 SPATA2 spermatogenesis associated 2 2 6
MIRT501816 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT502296 GNG12 G protein subunit gamma 12 2 6
MIRT502493 FAM122B family with sequence similarity 122B 2 8
MIRT503948 MFSD6 major facilitator superfamily domain containing 6 2 6
MIRT504266 C1orf147 chromosome 1 open reading frame 147 2 4
MIRT504370 ARID1B AT-rich interaction domain 1B 2 6
MIRT505125 YOD1 YOD1 deubiquitinase 2 4
MIRT506052 PPP6C protein phosphatase 6 catalytic subunit 2 4
MIRT506481 MYO5A myosin VA 2 6
MIRT506967 HOXA10 homeobox A10 2 6
MIRT507728 CLIC4 chloride intracellular channel 4 2 4
MIRT513081 IL20RB interleukin 20 receptor subunit beta 2 6
MIRT513570 FKBP14 FK506 binding protein 14 2 2
MIRT513631 UBE2A ubiquitin conjugating enzyme E2 A 2 4
MIRT513692 RNF111 ring finger protein 111 2 2
MIRT513764 PEX5L peroxisomal biogenesis factor 5 like 2 4
MIRT520786 TBX18 T-box 18 2 4
MIRT523402 GRIK3 glutamate ionotropic receptor kainate type subunit 3 2 4
MIRT525719 DCAF12L2 DDB1 and CUL4 associated factor 12 like 2 2 2
MIRT527750 NANOGNB NANOG neighbor homeobox 2 2
MIRT532823 ZNF827 zinc finger protein 827 2 2
MIRT534603 RORA RAR related orphan receptor A 2 2
MIRT535762 MYCN MYCN proto-oncogene, bHLH transcription factor 2 2
MIRT536346 LEFTY1 left-right determination factor 1 2 2
MIRT543081 APP amyloid beta precursor protein 2 2
MIRT544064 KIAA1462 junctional cadherin 5 associated 2 2
MIRT545424 SLC39A6 solute carrier family 39 member 6 2 2
MIRT546238 TNRC18P2 trinucleotide repeat containing 18 pseudogene 2 2 4
MIRT546324 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547361 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT547539 MAML3 mastermind like transcriptional coactivator 3 2 2
MIRT548062 GOLGA7 golgin A7 2 2
MIRT549248 ATXN1L ataxin 1 like 2 4
MIRT549250 ATXN1 ataxin 1 2 2
MIRT549467 ACSL4 acyl-CoA synthetase long chain family member 4 2 2
MIRT549937 RPL7L1 ribosomal protein L7 like 1 2 4
MIRT551489 TMEM192 transmembrane protein 192 2 4
MIRT552564 ZFP36L2 ZFP36 ring finger protein like 2 2 4
MIRT553688 TFAP4 transcription factor AP-4 2 4
MIRT553951 STAMBP STAM binding protein 2 2
MIRT554163 SLC7A2 solute carrier family 7 member 2 2 4
MIRT554477 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT554918 RAP2C RAP2C, member of RAS oncogene family 2 2
MIRT555003 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT555109 PURB purine rich element binding protein B 2 2
MIRT555445 NT5C3A 5'-nucleotidase, cytosolic IIIA 2 2
MIRT555535 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT556092 MORC3 MORC family CW-type zinc finger 3 2 2
MIRT556571 LIFR LIF receptor alpha 2 2
MIRT556936 INO80D INO80 complex subunit D 2 4
MIRT558176 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT558368 DIDO1 death inducer-obliterator 1 2 4
MIRT558464 DCUN1D1 defective in cullin neddylation 1 domain containing 1 2 2
MIRT559236 BICD2 BICD cargo adaptor 2 2 4
MIRT560099 ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 2 2
MIRT560725 ZNF749 zinc finger protein 749 2 2
MIRT561142 SPAG1 sperm associated antigen 1 2 2
MIRT561721 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT562484 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT562681 AGO4 argonaute 4, RISC catalytic component 2 2
MIRT564997 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT565068 USP25 ubiquitin specific peptidase 25 2 2
MIRT565184 TTC37 tetratricopeptide repeat domain 37 2 2
MIRT565946 RREB1 ras responsive element binding protein 1 2 2
MIRT566315 POU2F1 POU class 2 homeobox 1 2 2
MIRT566435 PHF3 PHD finger protein 3 2 2
MIRT566485 PCCB propionyl-CoA carboxylase beta subunit 2 2
MIRT566612 NR3C1 nuclear receptor subfamily 3 group C member 1 4 2
MIRT566761 MOB4 MOB family member 4, phocein 2 2
MIRT566867 LRRC1 leucine rich repeat containing 1 2 2
MIRT567232 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT567245 HSPA13 heat shock protein family A (Hsp70) member 13 2 2
MIRT567292 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 2 2
MIRT568426 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT570705 FAM69A family with sequence similarity 69 member A 2 2
MIRT570931 ZNF284 zinc finger protein 284 2 2
MIRT571631 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT571647 SIX4 SIX homeobox 4 2 2
MIRT574274 ZNF350 zinc finger protein 350 2 2
MIRT574304 CMTM6 CKLF like MARVEL transmembrane domain containing 6 2 2
MIRT574614 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT574843 CADM1 cell adhesion molecule 1 2 2
MIRT608128 TSC22D2 TSC22 domain family member 2 2 2
MIRT648849 WNT7A Wnt family member 7A 2 2
MIRT687559 MLEC malectin 2 2
MIRT696548 HIST1H3B histone cluster 1 H3 family member b 2 2
MIRT697517 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT701146 PANK1 pantothenate kinase 1 2 2
MIRT704284 DENND5B DENN domain containing 5B 2 2
MIRT704541 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT707687 GPR50 G protein-coupled receptor 50 2 2
MIRT707810 TSPAN6 tetraspanin 6 2 2
MIRT710019 KCNQ5 potassium voltage-gated channel subfamily Q member 5 2 2
MIRT712705 TEX9 testis expressed 9 2 2
MIRT731264 ETS1 ETS proto-oncogene 1, transcription factor 1 1
MIRT731606 SMAD4 SMAD family member 4 1 1
MIRT731688 MAP3K8 mitogen-activated protein kinase kinase kinase 8 3 1
MIRT731796 ZEB1 zinc finger E-box binding homeobox 1 3 1
MIRT731798 ZEB2 zinc finger E-box binding homeobox 2 3 1
MIRT732183 PTGS2 prostaglandin-endoperoxide synthase 2 3 1
MIRT732711 ADAM10 ADAM metallopeptidase domain 10 4 0
MIRT732936 HGF hepatocyte growth factor 1 0
MIRT733214 TLR2 toll like receptor 2 2 0
MIRT734500 ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif 5 3 0
MIRT734637 RPE ribulose-5-phosphate-3-epimerase 2 0
MIRT735650 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 1 0
MIRT736975 BCL6 B-cell CLL/lymphoma 6 3 0
MIRT737058 FBXW7 F-box and WD repeat domain containing 7 3 0
MIRT737435 CLK3 CDC like kinase 3 2 0
MIRT755765 FOXO1 forkhead box O1 3 1
MIRT755949 ONECUT2 one cut homeobox 2 7 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-144 Catechin approved 9064 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-144 Quercetin NULL 5280343 Microarray apoE−/− mice 22253797 2012 up-regulated
miR-144 Tert-butyl hydroperoxide (t-BHP) NULL 6410 Microarray mouse auditory cells 20510889 2010 up-regulated
miR-144 N-ethyl-N-nitrosourea NULL 12967 Quantitative real-time PCR mouse liver 21029445 2010 up-regulated
miR-144 Reversine NULL 210332 Microarray C2C12 myoblast cells 24513286 2014 up-regulated
miR-144 Cyclosporin A(CsA) approved 5284373 Quantitative real-time PCR human trophoblast (HT) cells 24453045 2014 down-regulated
miR-144 XMD8-92 NULL 46843772 Microarray pancreatic ductal adenocarcinoma cell 24880079 2014 up-regulated
miR-144 Trichostatin A (TSA) NULL 444732 Microarray apoptosis-resistant breast cancer cells 21971930 2011 up-regulated
miR-144 Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-144 1,2,6-Tri-O-galloyl-beta-D-glucopyranose NULL NULL Microarray HepG2 hepatocarcinoma cells. 22506400 2011 down-regulated
miR-144 Bicalutamide approved 2375 Microarray prostate 22674191 2012 down-regulated
miR-144 Lithium (Li) approved 3028194 Microarray rat hippocampus 18704095 2009 up-regulated
miR-144 Lithium (Li) approved 3028194 Quantitative real-time PCR rat hippocampus 18704095 2009 up-regulated
miR-144 Valproate approved 3121 Microarray rat hippocampus 18704095 2009 up-regulated
miR-144 Valproate approved 3121 Quantitative real-time PCR rat hippocampus 18704095 2009 up-regulated
miR-144 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Microarray embryos 22921993 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-144 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-144 Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-144-3p Cyclopamine 442972 NSC734950 sensitive Low Prostate Cancer cell line (DU-145, PC-3)
hsa-miR-144-3p Paclitaxel 36314 NSC125973 approved sensitive Low Prostate Cancer cell line (DU-145, PC-3)
hsa-miR-144-3p Imatinib 5291 NSC743414 approved sensitive Low Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-144-3p Fluorouracil + Oxaliplatin resistant High Colorectal Cancer tissue
hsa-miR-144-3p Fluorouracil + Oxaliplatin resistant High Colorectal Cancer tissue
hsa-miR-144-3p Platinum-based doublet chemotherapy resistant Low Lung Adenocarcinoma tissue
hsa-miR-144-3p Temozolomide 5394 NSC362856 approved sensitive Low Glioblastoma cell line (U87, LN229, U251, LN18）
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Prostate Cancer tissue and cell line (PC-3, LNCap)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved resistant Low Cervical Cancer tissue
hsa-miR-144-3p Sunitinib 5329102 NSC750690 approved resistant Low Renal Cell Cancer cell line (SN12-PM6, 786-O)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Urothelial Bladder Cancer cell line (T24)
hsa-miR-144-3p Gemcitabine 60750 NSC613327 approved sensitive Low Urothelial Bladder Cancer cell line (T24)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Anaplastic Thyroid Cancer tissue
hsa-miR-144-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-144-3p Panobinostat 6918837 NSC761190 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-144-3p Cyclophosphamide + Doxorubicin + Vincristine + Prednisone + Rituximab sensitive High Diffuse Large B-Cell Lymphoma cell line (SU-DHL-2)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Cervical Cancer cell line (HeLa)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Breast Cancer cell line (MCF-7)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Hepatocellular Carcinoma cell line (HepG2)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Non-Small Cell Lung Cancer cell line (A549, H1299)
hsa-miR-144-3p Radioactivity Iodine sensitive High Papillary Thyroid Cancer tissue
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Cervical Cancer cell line (HeLa, SiHa)
hsa-miR-144-3p Fluorouracil 3385 NSC19893 approved sensitive High Gastric Cancer cell line (MGC-803)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive Low Neuroblastoma cell line (SH-SY5Y, SK-N-SH)
hsa-miR-144-3p Doxorubicin 31703 NSC123127 approved sensitive Low Neuroblastoma cell line (SK-N-SH, IMR-32)
hsa-miR-144-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer tissue
hsa-miR-144-3p Pazopanib 10113978 NSC752782 approved sensitive Low Renal Cell Cancer tissue
hsa-miR-144-3p Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer cell line (MCF-7)
hsa-miR-144-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-144-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-144-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-144-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-144-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-144-3p 4-Hydroxytamoxifen+Tamoxifen sensitive cell line (LY2)
hsa-miR-144-3p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-144-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-144-3p Tamoxifen 2733525 NSC180973 approved resistant cell line (TamR4)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-144-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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