miRTarBase - #MIRT004276


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pre-miRNA Information
pre-miRNA hsa-mir-520g   
Genomic Coordinates chr19: 53722166 - 53722255
Description Homo sapiens miR-520g stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-520g-3p
Sequence 55| ACAAAGUGCUUCCCUUUAGAGUGU |78
Evidence Experimental
Experiments Array-cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1323826229 2 dbSNP
rs755388007 3 dbSNP
rs1164244906 6 dbSNP
rs1246278474 7 dbSNP
rs765799681 8 dbSNP
rs753182219 9 dbSNP
rs572746807 17 dbSNP
rs1384883413 18 dbSNP
rs1439199232 20 dbSNP
rs780750635 21 dbSNP
rs745461502 22 dbSNP
rs370035590 23 dbSNP
rs1017282550 24 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol VEGFA   
Synonyms MVCD1, VEGF, VPF
Description vascular endothelial growth factor A
Transcript NM_001025369   
Other Transcripts NM_001025367 , NM_001025368 , NM_001025366 , NM_001025370 , NM_001033756 , NM_001171622 , NM_001171623 , NM_001171624 , NM_001171625 , NM_001171626 , NM_001171627 , NM_001171628 , NM_001171629 , NM_001171630 , NM_003376   
Expression
Putative miRNA Targets on VEGFA
3'UTR of VEGFA
(miRNA target sites are highlighted)		 
>VEGFA|NM_001025369|3'UTR
   1 CAAGCCGAGGCGGTGAGCCGGGCAGGAGGAAGGAGCCTCCCTCAGGGTTTCGGGAACCAGATCTCTCACCAGGAAAGACT
  81 GATACAGAACGATCGATACAGAAACCACGCTGCCGCCACCACACCATCACCATCGACAGAACAGTCCTTAATCCAGAAAC
 161 CTGAAATGAAGGAAGAGGAGACTCTGCGCAGAGCACTTTGGGTCCGGAGGGCGAGACTCCGGCGGAAGCATTCCCGGGCG
 241 GGTGACCCAGCACGGTCCCTCTTGGAATTGGATTCGCCATTTTATTTTTCTTGCTGCTAAATCACCGAGCCCGGAAGATT
 321 AGAGAGTTTTATTTCTGGGATTCCTGTAGACACACCCACCCACATACATACATTTATATATATATATATTATATATATAT
 401 AAAAATAAATATCTCTATTTTATATATATAAAATATATATATTCTTTTTTTAAATTAACAGTGCTAATGTTATTGGTGTC
 481 TTCACTGGATGTATTTGACTGCTGTGGACTTGAGTTGGGAGGGGAATGTTCCCACTCAGATCCTGACAGGGAAGAGGAGG
 561 AGATGAGAGACTCTGGCATGATCTTTTTTTTGTCCCACTTGGTGGGGCCAGGGTCCTCTCCCCTGCCCAGGAATGTGCAA
 641 GGCCAGGGCATGGGGGCAAATATGACCCAGTTTTGGGAACACCGACAAACCCAGCCCTGGCGCTGAGCCTCTCTACCCCA
 721 GGTCAGACGGACAGAAAGACAGATCACAGGTACAGGGATGAGGACACCGGCTCTGACCAGGAGTTTGGGGAGCTTCAGGA
 801 CATTGCTGTGCTTTGGGGATTCCCTCCACATGCTGCACGCGCATCTCGCCCCCAGGGGCACTGCCTGGAAGATTCAGGAG
 881 CCTGGGCGGCCTTCGCTTACTCTCACCTGCTTCTGAGTTGCCCAGGAGACCACTGGCAGATGTCCCGGCGAAGAGAAGAG
 961 ACACATTGTTGGAAGAAGCAGCCCATGACAGCTCCCCTTCCTGGGACTCGCCCTCATCCTCTTCCTGCTCCCCTTCCTGG
1041 GGTGCAGCCTAAAAGGACCTATGTCCTCACACCATTGAAACCACTAGTTCTGTCCCCCCAGGAGACCTGGTTGTGTGTGT
1121 GTGAGTGGTTGACCTTCCTCCATCCCCTGGTCCTTCCCTTCCCTTCCCGAGGCACAGAGAGACAGGGCAGGATCCACGTG
1201 CCCATTGTGGAGGCAGAGAAAAGAGAAAGTGTTTTATATACGGTACTTATTTAATATCCCTTTTTAATTAGAAATTAAAA
1281 CAGTTAATTTAATTAAAGAGTAGGGTTTTTTTTCAGTATTCTTGGTTAATATTTAATTTCAACTATTTATGAGATGTATC
1361 TTTTGCTCTCTCTTGCTCTCTTATTTGTACCGGTTTTTGTATATAAAATTCATGTTTCCAATCTCTCTCTCCCTGATCGG
1441 TGACAGTCACTAGCTTATCTTGAACAGATATTTAATTTTGCTAACACTCAGCTCTGCCCTCCCCGATCCCCTGGCTCCCC
1521 AGCACACATTCCTTTGAAATAAGGTTTCAATATACATCTACATACTATATATATATTTGGCAACTTGTATTTGTGTGTAT
1601 ATATATATATATATGTTTATGTATATATGTGATTCTGATAAAATAGACATTGCTATTCTGTTTTTTATATGTAAAAACAA
1681 AACAAGAAAAAATAGAGAATTCTACATACTAAATCTCTCTCCTTTTTTAATTTTAATATTTGTTATCATTTATTTATTGG
1761 TGCTACTGTTTATCCGTAATAATTGTGGGGAAAAGATATTAACATCACGTCTTTGTCTCTAGTGCAGTTTTTCGAGATAT
1841 TCCGTAGTACATATTTATTTTTAAACAACGACAAAGAAATACAGATATATCTTAAAAAAAAAAAAGCATTTTGTATTAAA
1921 GAATTTAATTCTGATCTCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugUGAGAUUUCCCUUCGUGAAACa 5'
            ||||| : |  :||||||||| 
Target 5' agACTCT-GCGCAGAGCACTTTGg 3'
 179 - 201 165.00 -17.70
2 
miRNA  3' ugugagaUUUCCCUUCGUGAAACa 5'
                 |||   |||||:|||| 
Target 5' cttaaaaAAAAAAAAGCATTTTGt 3'
 1891 - 1914 145.00 -11.00
3 
miRNA  3' ugugagaUUUCCCUUC---GUGAAACa 5'
                 :||| ||||   ||| ||| 
Target 5' tcccggcGAAGAGAAGAGACACATTGt 3'
 943 - 969 129.00 -9.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM6846710 7 COSMIC
COSM6819794 11 COSMIC
COSM7497899 13 COSMIC
COSM7701081 13 COSMIC
COSM3627761 14 COSMIC
COSM7659088 16 COSMIC
COSN26958505 21 COSMIC
COSN30524014 29 COSMIC
COSN27004587 41 COSMIC
COSM9012089 52 COSMIC
COSM3352182 64 COSMIC
COSM3411133 77 COSMIC
COSM7974398 79 COSMIC
COSN30143001 88 COSMIC
COSN30102404 95 COSMIC
COSN31508134 96 COSMIC
COSN31596624 99 COSMIC
COSN30455964 114 COSMIC
COSN4893933 129 COSMIC
COSN30153771 136 COSMIC
COSN30476233 148 COSMIC
COSN30456378 154 COSMIC
COSN30133882 169 COSMIC
COSN30171185 169 COSMIC
COSN30584487 207 COSMIC
COSN31567017 221 COSMIC
COSN30158763 245 COSMIC
COSN167777 254 COSMIC
COSN30632779 277 COSMIC
COSN31485413 294 COSMIC
COSN31564704 314 COSMIC
COSN30541187 426 COSMIC
COSN31593685 466 COSMIC
COSN31522262 489 COSMIC
COSN31594835 539 COSMIC
COSN20274509 584 COSMIC
COSN21290319 729 COSMIC
COSN28703738 769 COSMIC
COSN30164957 927 COSMIC
COSN31545074 950 COSMIC
COSN2162691 1024 COSMIC
COSN24614414 1129 COSMIC
COSN31533515 1166 COSMIC
COSN31524418 1170 COSMIC
COSN31563310 1188 COSMIC
COSN28249886 1314 COSMIC
COSN31606167 1314 COSMIC
COSN7883560 1375 COSMIC
COSN8514383 1428 COSMIC
COSN31548668 1559 COSMIC
COSN28017862 1576 COSMIC
COSN7883561 1598 COSMIC
COSN23225630 1614 COSMIC
COSN31486284 1638 COSMIC
COSN31530820 1667 COSMIC
COSN31480000 1720 COSMIC
COSN31610033 1741 COSMIC
COSN31516478 1759 COSMIC
COSN30175512 1810 COSMIC
COSN19503017 1819 COSMIC
COSN20213960 1825 COSMIC
COSN31522645 1827 COSMIC
COSN31551365 1870 COSMIC
COSN27224860 1906 COSMIC
COSN31568751 1922 COSMIC
rs3025053 1043 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs748984440 1 dbSNP
rs371208770 4 dbSNP
rs1272402969 6 dbSNP
rs768366559 7 dbSNP
rs778358844 8 dbSNP
rs144772480 11 dbSNP
rs771561387 12 dbSNP
rs374253522 13 dbSNP
rs367809801 20 dbSNP
rs201575061 21 dbSNP
rs1159309955 27 dbSNP
rs769516531 28 dbSNP
rs1410335572 29 dbSNP
rs1046219704 37 dbSNP
rs1423738097 39 dbSNP
rs1459938559 39 dbSNP
rs1383348581 40 dbSNP
rs1169570968 41 dbSNP
rs775856114 42 dbSNP
rs1395831641 44 dbSNP
rs775012448 45 dbSNP
rs374044063 52 dbSNP
rs1335475234 56 dbSNP
rs917813568 62 dbSNP
rs202125661 64 dbSNP
rs774432825 65 dbSNP
rs1269130764 67 dbSNP
rs762001063 68 dbSNP
rs767672556 72 dbSNP
rs750489567 75 dbSNP
rs756142052 84 dbSNP
rs1249577551 87 dbSNP
rs1438175455 88 dbSNP
rs201001455 91 dbSNP
rs753667339 92 dbSNP
rs200439877 95 dbSNP
rs201676874 96 dbSNP
rs1418611973 99 dbSNP
rs1404175496 100 dbSNP
rs1347884113 106 dbSNP
rs372384354 108 dbSNP
rs770300127 109 dbSNP
rs775795841 110 dbSNP
rs111933757 112 dbSNP
rs1330516915 113 dbSNP
rs369043844 115 dbSNP
rs1413732811 116 dbSNP
rs1481115447 123 dbSNP
rs1293381502 126 dbSNP
rs1336225539 130 dbSNP
rs1216787567 131 dbSNP
rs774672415 132 dbSNP
rs376707517 135 dbSNP
rs1234890403 136 dbSNP
rs1205870489 140 dbSNP
rs753429817 143 dbSNP
rs931623857 146 dbSNP
rs187429037 156 dbSNP
rs891362263 166 dbSNP
rs1284892129 175 dbSNP
rs987423086 176 dbSNP
rs1222127052 182 dbSNP
rs578148161 186 dbSNP
rs112005313 187 dbSNP
rs1182403544 188 dbSNP
rs1377053612 196 dbSNP
rs1353903332 199 dbSNP
rs965161532 206 dbSNP
rs978846445 207 dbSNP
rs1406104557 209 dbSNP
rs112256643 213 dbSNP
rs936479141 214 dbSNP
rs988080022 218 dbSNP
rs1210630136 219 dbSNP
rs149179279 221 dbSNP
rs913819452 222 dbSNP
rs563703669 224 dbSNP
rs1232786789 225 dbSNP
rs1461834731 234 dbSNP
rs578064053 236 dbSNP
rs543089337 237 dbSNP
rs561490568 239 dbSNP
rs937769907 240 dbSNP
rs529074549 241 dbSNP
rs3025039 254 dbSNP
rs559522706 255 dbSNP
rs963141368 260 dbSNP
rs1382924269 263 dbSNP
rs1335433160 265 dbSNP
rs993623699 269 dbSNP
rs1026557481 276 dbSNP
rs973226910 277 dbSNP
rs1159368851 279 dbSNP
rs1400549113 282 dbSNP
rs1378787222 289 dbSNP
rs1185964647 290 dbSNP
rs778163655 307 dbSNP
rs890715188 308 dbSNP
rs533046584 313 dbSNP
rs551692177 314 dbSNP
rs1479430148 316 dbSNP
rs570044029 318 dbSNP
rs964713658 321 dbSNP
rs1215263426 323 dbSNP
rs537491073 325 dbSNP
rs1042624192 339 dbSNP
rs1033082420 343 dbSNP
rs549490546 345 dbSNP
rs902787596 349 dbSNP
rs1333377740 351 dbSNP
rs936794448 361 dbSNP
rs1363433630 372 dbSNP
rs1053987330 375 dbSNP
rs1289097615 375 dbSNP
rs895212897 375 dbSNP
rs567722917 377 dbSNP
rs1425661285 381 dbSNP
rs368441324 389 dbSNP
rs1186179862 390 dbSNP
rs1262436004 390 dbSNP
rs371875161 390 dbSNP
rs535119313 391 dbSNP
rs553262626 392 dbSNP
rs578135072 400 dbSNP
rs982021226 403 dbSNP
rs538948863 414 dbSNP
rs963275334 416 dbSNP
rs973196202 423 dbSNP
rs1028824123 430 dbSNP
rs1295623940 432 dbSNP
rs1213458290 434 dbSNP
rs1304581618 440 dbSNP
rs937671499 440 dbSNP
rs1238203994 443 dbSNP
rs1467779736 445 dbSNP
rs557256799 445 dbSNP
rs987593914 452 dbSNP
rs1191406667 462 dbSNP
rs1037894818 463 dbSNP
rs757492858 464 dbSNP
rs1169886788 467 dbSNP
rs1476863432 477 dbSNP
rs1378985785 479 dbSNP
rs1478270034 500 dbSNP
rs911648535 502 dbSNP
rs1266320765 506 dbSNP
rs1208019685 510 dbSNP
rs945680828 516 dbSNP
rs1251789402 522 dbSNP
rs1226146309 526 dbSNP
rs1315522300 528 dbSNP
rs929023157 540 dbSNP
rs1047886858 543 dbSNP
rs1299582804 568 dbSNP
rs1401171836 574 dbSNP
rs36001252 575 dbSNP
rs924176625 581 dbSNP
rs1440234937 583 dbSNP
rs1324204022 584 dbSNP
rs890601547 594 dbSNP
rs1333044240 601 dbSNP
rs1009117670 609 dbSNP
rs1437635641 611 dbSNP
rs559477981 617 dbSNP
rs1376875253 626 dbSNP
rs936930305 636 dbSNP
rs1039274565 643 dbSNP
rs560963332 644 dbSNP
rs1420652852 649 dbSNP
rs1251234417 650 dbSNP
rs1053956091 660 dbSNP
rs111590525 661 dbSNP
rs1203931487 663 dbSNP
rs1259234032 665 dbSNP
rs1000200646 684 dbSNP
rs1211266484 700 dbSNP
rs1269022481 702 dbSNP
rs185294556 703 dbSNP
rs956118182 710 dbSNP
rs1385119736 712 dbSNP
rs747321252 723 dbSNP
rs1187263279 728 dbSNP
rs771331791 729 dbSNP
rs906635173 730 dbSNP
rs1240099342 732 dbSNP
rs573628689 735 dbSNP
rs1364096972 742 dbSNP
rs530287018 745 dbSNP
rs1171357298 746 dbSNP
rs1437697716 748 dbSNP
rs1244871227 752 dbSNP
rs541137949 767 dbSNP
rs3025040 769 dbSNP
rs899086791 770 dbSNP
rs1206466612 771 dbSNP
rs1351851092 778 dbSNP
rs926554562 779 dbSNP
rs528762513 795 dbSNP
rs1238634262 803 dbSNP
rs750478984 806 dbSNP
rs959332666 808 dbSNP
rs973099534 816 dbSNP
rs920222087 826 dbSNP
rs1338721383 836 dbSNP
rs533184854 839 dbSNP
rs746442886 840 dbSNP
rs1019082216 841 dbSNP
rs912091383 842 dbSNP
rs769164425 848 dbSNP
rs1417601085 852 dbSNP
rs1039732235 853 dbSNP
rs114607160 855 dbSNP
rs563616137 859 dbSNP
rs1194914456 862 dbSNP
rs1447164963 869 dbSNP
rs1165908869 881 dbSNP
rs530836187 886 dbSNP
rs1054465756 888 dbSNP
rs891771619 889 dbSNP
rs778009175 892 dbSNP
rs1266641860 895 dbSNP
rs1228190758 896 dbSNP
rs1354375361 908 dbSNP
rs958268348 909 dbSNP
rs989696266 915 dbSNP
rs1204225098 920 dbSNP
rs190588351 921 dbSNP
rs1281668721 929 dbSNP
rs10434 930 dbSNP
rs1194111230 933 dbSNP
rs1046569871 935 dbSNP
rs1024374658 939 dbSNP
rs1474152384 947 dbSNP
rs970585789 948 dbSNP
rs1370228735 950 dbSNP
rs762477558 951 dbSNP
rs940800585 956 dbSNP
rs528542280 959 dbSNP
rs1802040 965 dbSNP
rs780389723 965 dbSNP
rs1458449719 966 dbSNP
rs542812735 967 dbSNP
rs1033895355 969 dbSNP
rs1158265666 984 dbSNP
rs959320221 985 dbSNP
rs41430645 994 dbSNP
rs1421982497 996 dbSNP
rs571724503 1010 dbSNP
rs1196527327 1011 dbSNP
rs889053103 1013 dbSNP
rs539264549 1015 dbSNP
rs1375393155 1025 dbSNP
rs950374975 1032 dbSNP
rs983187952 1033 dbSNP
rs911639125 1034 dbSNP
rs1347195644 1042 dbSNP
rs3025053 1043 dbSNP
rs1315397399 1049 dbSNP
rs1018802888 1052 dbSNP
rs1330804662 1060 dbSNP
rs1465703676 1061 dbSNP
rs1398840917 1066 dbSNP
rs1168139170 1073 dbSNP
rs1340601909 1074 dbSNP
rs1237683119 1076 dbSNP
rs182317842 1082 dbSNP
rs967528845 1082 dbSNP
rs1355323511 1083 dbSNP
rs1235155844 1085 dbSNP
rs974949193 1092 dbSNP
rs780075986 1095 dbSNP
rs536572716 1096 dbSNP
rs936286611 1099 dbSNP
rs1054700031 1101 dbSNP
rs1278142103 1107 dbSNP
rs1218494807 1110 dbSNP
rs747174244 1112 dbSNP
rs750140926 1112 dbSNP
rs891823874 1114 dbSNP
rs554910999 1117 dbSNP
rs946026389 1118 dbSNP
rs1045881192 1129 dbSNP
rs1328747281 1133 dbSNP
rs916787221 1141 dbSNP
rs552833857 1147 dbSNP
rs969693893 1152 dbSNP
rs907293552 1156 dbSNP
rs1424533026 1162 dbSNP
rs1001985161 1167 dbSNP
rs573618781 1169 dbSNP
rs1236857244 1176 dbSNP
rs1185538685 1177 dbSNP
rs767407432 1178 dbSNP
rs1378708490 1181 dbSNP
rs894943055 1191 dbSNP
rs994796268 1198 dbSNP
rs540750016 1199 dbSNP
rs1286032880 1205 dbSNP
rs1027510808 1224 dbSNP
rs950427338 1229 dbSNP
rs1305169953 1237 dbSNP
rs930617155 1239 dbSNP
rs1403528948 1242 dbSNP
rs553079671 1243 dbSNP
rs183460308 1261 dbSNP
rs188186771 1266 dbSNP
rs1301900924 1282 dbSNP
rs563477755 1282 dbSNP
rs1445303928 1284 dbSNP
rs889012828 1288 dbSNP
rs781756914 1289 dbSNP
rs1379071045 1295 dbSNP
rs1419446054 1295 dbSNP
rs1040602724 1306 dbSNP
rs540841861 1306 dbSNP
rs902983990 1306 dbSNP
rs1240373198 1315 dbSNP
rs1302201612 1316 dbSNP
rs1310273438 1317 dbSNP
rs1235131035 1319 dbSNP
rs1256590703 1322 dbSNP
rs1480233272 1325 dbSNP
rs1195320768 1326 dbSNP
rs530796133 1328 dbSNP
rs1242885426 1344 dbSNP
rs1217153992 1362 dbSNP
rs141683858 1366 dbSNP
rs1487833118 1367 dbSNP
rs566144283 1375 dbSNP
rs998690665 1377 dbSNP
rs1236385878 1384 dbSNP
rs561110106 1392 dbSNP
rs1179547642 1393 dbSNP
rs1394687532 1404 dbSNP
rs974876708 1412 dbSNP
rs1012981736 1420 dbSNP
rs1022651742 1422 dbSNP
rs1399841886 1428 dbSNP
rs922150020 1430 dbSNP
rs936146834 1431 dbSNP
rs866177519 1433 dbSNP
rs1035686035 1434 dbSNP
rs990438125 1439 dbSNP
rs41282644 1440 dbSNP
rs1378733321 1447 dbSNP
rs1424680592 1447 dbSNP
rs1461877796 1455 dbSNP
rs373941416 1458 dbSNP
rs1260712972 1495 dbSNP
rs972219770 1500 dbSNP
rs946247119 1502 dbSNP
rs920667200 1505 dbSNP
rs1049160 1506 dbSNP
rs1251883361 1511 dbSNP
rs986535970 1516 dbSNP
rs1217593105 1517 dbSNP
rs1338934938 1522 dbSNP
rs1285640131 1523 dbSNP
rs910587281 1526 dbSNP
rs907173870 1527 dbSNP
rs1390734609 1529 dbSNP
rs1292281454 1532 dbSNP
rs1463605064 1535 dbSNP
rs1401040618 1537 dbSNP
rs944711139 1544 dbSNP
rs181069410 1548 dbSNP
rs796446173 1551 dbSNP
rs895003063 1556 dbSNP
rs934450906 1557 dbSNP
rs1054316295 1563 dbSNP
rs1189338814 1568 dbSNP
rs1458715708 1570 dbSNP
rs1258090828 1590 dbSNP
rs1216761169 1592 dbSNP
rs994627281 1595 dbSNP
rs1259885197 1596 dbSNP
rs34241255 1598 dbSNP
rs370654536 1598 dbSNP
rs532477681 1598 dbSNP
rs147035281 1600 dbSNP
rs1377770130 1608 dbSNP
rs3025054 1613 dbSNP
rs549547019 1616 dbSNP
rs150363719 1618 dbSNP
rs995961655 1628 dbSNP
rs1173361780 1630 dbSNP
rs1466371933 1631 dbSNP
rs1029155433 1634 dbSNP
rs972188375 1639 dbSNP
rs1428258842 1653 dbSNP
rs1441524268 1657 dbSNP
rs553136985 1661 dbSNP
rs952122946 1669 dbSNP
rs1456063452 1670 dbSNP
rs1257856744 1676 dbSNP
rs1426397353 1679 dbSNP
rs1344793774 1681 dbSNP
rs957591908 1684 dbSNP
rs1242737371 1687 dbSNP
rs1355091784 1692 dbSNP
rs1309159530 1705 dbSNP
rs990322138 1707 dbSNP
rs1385009536 1709 dbSNP
rs1335108170 1714 dbSNP
rs1395626761 1715 dbSNP
rs913363312 1729 dbSNP
rs1163501700 1740 dbSNP
rs967640594 1744 dbSNP
rs796725834 1745 dbSNP
rs1380903852 1747 dbSNP
rs910629028 1749 dbSNP
rs1459081462 1766 dbSNP
rs944700713 1769 dbSNP
rs1187844012 1774 dbSNP
rs1293719095 1776 dbSNP
rs1253602433 1777 dbSNP
rs773067982 1786 dbSNP
rs778075982 1796 dbSNP
rs1219330561 1807 dbSNP
rs866951594 1809 dbSNP
rs937321687 1810 dbSNP
rs1280090418 1811 dbSNP
rs934586127 1812 dbSNP
rs1284907566 1818 dbSNP
rs567150308 1824 dbSNP
rs371781236 1834 dbSNP
rs931363788 1835 dbSNP
rs1401635629 1844 dbSNP
rs1048886254 1849 dbSNP
rs1320176024 1855 dbSNP
rs1360859863 1864 dbSNP
rs1297542595 1869 dbSNP
rs1417734801 1870 dbSNP
rs948564402 1871 dbSNP
rs1266240172 1888 dbSNP
rs1044129922 1894 dbSNP
rs1366408341 1894 dbSNP
rs869136464 1894 dbSNP
rs886252251 1895 dbSNP
rs1191952751 1896 dbSNP
rs1004772225 1897 dbSNP
rs1262868047 1899 dbSNP
rs1040674850 1900 dbSNP
rs1215113355 1901 dbSNP
rs901547945 1902 dbSNP
rs76989981 1905 dbSNP
rs534658089 1914 dbSNP
rs1209378776 1921 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Cos-7
Location of target site 3'UTR
Tools used in this research FindTar
Original Description (Extracted from the article) ... {This MTI is shown in Fig. 1 and Fig. 2} ...

- Ye W; Lv Q; Wong CK; Hu S; Fu C; Hua Z; Cai et al., 2008, PloS one.

Article - Ye W; Lv Q; Wong CK; Hu S; Fu C; Hua Z; Cai et al.
- PloS one, 2008
MicroRNAs (miRNAs) guide posttranscriptional repression of mRNAs. Hundreds of miRNAs have been identified but the target identification of mammalian mRNAs is still a difficult task due to a poor understanding of the interaction between miRNAs and the miRNA recognizing element (MRE). In recent research, the importance of the 5' end of the miRNA:MRE duplex has been emphasized and the effect of the tail region addressed, but the role of the central loop has largely remained unexplored. Here we examined the effect of the loop region in miRNA:MRE duplexes and found that the location of the central loop is one of the important factors affecting the efficiency of gene regulation mediated by miRNAs. It was further determined that the addition of a loop score combining both location and size as a new criterion for predicting MREs and their cognate miRNAs significantly decreased the false positive rates and increased the specificity of MRE prediction.
LinkOut: [PMID: 18320040]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
BRCA 0.286 0.16 0.231 0.21 14 Click to see details
LIHC -0.631 0.28 -1.000 0.5 3 Click to see details
HNSC -0.158 0.37 0.000 0.5 7 Click to see details
HNSC -0.158 0.37 0.000 0.5 7 Click to see details
HNSC -0.158 0.37 0.000 0.5 7 Click to see details
HNSC -0.158 0.37 0.000 0.5 7 Click to see details
362 hsa-miR-520g-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT004276 VEGFA vascular endothelial growth factor A 2 1
MIRT061377 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT070863 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT074319 TNRC6A trinucleotide repeat containing 6A 2 4
MIRT081126 LDLR low density lipoprotein receptor 2 6
MIRT093444 MSMO1 methylsterol monooxygenase 1 2 2
MIRT103397 CBX3 chromobox 3 2 2
MIRT107536 VLDLR very low density lipoprotein receptor 2 2
MIRT109624 KLHL15 kelch like family member 15 2 4
MIRT119717 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT130126 TXNIP thioredoxin interacting protein 2 2
MIRT133699 SKI SKI proto-oncogene 2 2
MIRT140155 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT153990 PRNP prion protein 2 2
MIRT161898 FXR1 FMR1 autosomal homolog 1 2 2
MIRT164670 WHSC1 nuclear receptor binding SET domain protein 2 2 4
MIRT178073 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT193026 TMOD3 tropomodulin 3 2 2
MIRT216879 MSH3 mutS homolog 3 2 2
MIRT230977 PRRG4 proline rich and Gla domain 4 2 2
MIRT242752 FNBP1L formin binding protein 1 like 2 2
MIRT249018 PABPC3 poly(A) binding protein cytoplasmic 3 2 8
MIRT254769 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266862 SLC25A44 solute carrier family 25 member 44 2 2
MIRT275453 TMPO thymopoietin 2 2
MIRT285530 CDT1 chromatin licensing and DNA replication factor 1 2 2
MIRT286959 SOCS7 suppressor of cytokine signaling 7 2 2
MIRT301219 SH3BP4 SH3 domain binding protein 4 2 2
MIRT325706 CSTF2 cleavage stimulation factor subunit 2 2 2
MIRT437832 SMAD7 SMAD family member 7 3 1
MIRT442639 TBC1D12 TBC1 domain family member 12 2 2
MIRT443433 MAPT microtubule associated protein tau 2 2
MIRT446289 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT447962 WDR77 WD repeat domain 77 2 2
MIRT454271 PSMA1 proteasome subunit alpha 1 2 2
MIRT454809 NEDD9 neural precursor cell expressed, developmentally down-regulated 9 2 2
MIRT456031 CRYZ crystallin zeta 2 8
MIRT462068 CCDC77 coiled-coil domain containing 77 2 4
MIRT463549 ZBTB5 zinc finger and BTB domain containing 5 2 4
MIRT470351 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT474452 KLHL11 kelch like family member 11 2 10
MIRT476644 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT481110 B2M beta-2-microglobulin 2 2
MIRT481790 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT482106 AKT3 AKT serine/threonine kinase 3 2 4
MIRT482526 ACTB actin beta 2 4
MIRT485571 FOXQ1 forkhead box Q1 2 2
MIRT486010 LPAR2 lysophosphatidic acid receptor 2 2 2
MIRT493607 HMGB3 high mobility group box 3 2 6
MIRT495181 MUC20 mucin 20, cell surface associated 2 2
MIRT496046 MORC1 MORC family CW-type zinc finger 1 2 2
MIRT496734 TRIM31 tripartite motif containing 31 2 2
MIRT497421 FAM46A family with sequence similarity 46 member A 2 2
MIRT497493 RGS17 regulator of G protein signaling 17 2 2
MIRT497751 OXGR1 oxoglutarate receptor 1 2 2
MIRT498355 ABHD17B abhydrolase domain containing 17B 2 2
MIRT501454 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT501584 PLEKHA1 pleckstrin homology domain containing A1 2 10
MIRT501781 NRBF2 nuclear receptor binding factor 2 2 6
MIRT506503 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT507414 ELK4 ELK4, ETS transcription factor 2 2
MIRT508557 CEP72 centrosomal protein 72 2 4
MIRT508726 ZNF682 zinc finger protein 682 2 4
MIRT508762 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT508818 GPR155 G protein-coupled receptor 155 2 2
MIRT509112 BMP8B bone morphogenetic protein 8b 2 6
MIRT509273 NPM3 nucleophosmin/nucleoplasmin 3 2 6
MIRT511537 HMGB1 high mobility group box 1 2 6
MIRT514118 SERF2 small EDRK-rich factor 2 2 2
MIRT514302 FXYD5 FXYD domain containing ion transport regulator 5 2 6
MIRT514962 SIGLEC11 sialic acid binding Ig like lectin 11 2 2
MIRT515557 TMEM134 transmembrane protein 134 2 2
MIRT516042 MED18 mediator complex subunit 18 2 2
MIRT516540 MIXL1 Mix paired-like homeobox 2 2
MIRT516992 COX19 COX19, cytochrome c oxidase assembly factor 2 4
MIRT517169 SLC28A1 solute carrier family 28 member 1 2 2
MIRT517242 PRIM1 DNA primase subunit 1 2 4
MIRT517722 KIF1C kinesin family member 1C 2 2
MIRT517797 EFCAB11 EF-hand calcium binding domain 11 2 4
MIRT517997 SLC16A13 solute carrier family 16 member 13 2 2
MIRT518033 ABHD15 abhydrolase domain containing 15 2 4
MIRT518843 NEK8 NIMA related kinase 8 2 2
MIRT518874 NKD1 naked cuticle homolog 1 2 2
MIRT520138 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT521531 QSOX1 quiescin sulfhydryl oxidase 1 2 4
MIRT522855 KIAA1551 KIAA1551 2 2
MIRT522976 INTU inturned planar cell polarity protein 2 2
MIRT523064 HYPK huntingtin interacting protein K 2 2
MIRT523421 GPR157 G protein-coupled receptor 157 2 2
MIRT524077 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT524277 CYCS cytochrome c, somatic 2 2
MIRT524326 CRLF3 cytokine receptor like factor 3 2 4
MIRT524374 CREB1 cAMP responsive element binding protein 1 2 2
MIRT524439 CNKSR3 CNKSR family member 3 2 2
MIRT524756 BCL2L2 BCL2 like 2 2 2
MIRT526621 NME6 NME/NM23 nucleoside diphosphate kinase 6 2 2
MIRT529610 H1F0 H1 histone family member 0 2 2
MIRT529984 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 6
MIRT530605 C7orf33 chromosome 7 open reading frame 33 2 4
MIRT531759 TXK TXK tyrosine kinase 2 4
MIRT532031 FHDC1 FH2 domain containing 1 2 2
MIRT532107 RRP8 ribosomal RNA processing 8 2 2
MIRT532920 ZNF385A zinc finger protein 385A 2 2
MIRT533005 ZFHX3 zinc finger homeobox 3 2 4
MIRT533102 YOD1 YOD1 deubiquitinase 2 2
MIRT534262 SLC12A7 solute carrier family 12 member 7 2 2
MIRT534458 SCML2 Scm polycomb group protein like 2 2 4
MIRT534982 PRR11 proline rich 11 2 2
MIRT536679 IKZF5 IKAROS family zinc finger 5 2 2
MIRT537431 FBXL7 F-box and leucine rich repeat protein 7 2 2
MIRT538035 DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 2 2
MIRT539717 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT540260 FAM89A family with sequence similarity 89 member A 2 2
MIRT540372 MASTL microtubule associated serine/threonine kinase like 2 2
MIRT540519 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT540651 ZNF514 zinc finger protein 514 2 2
MIRT540921 KCNA7 potassium voltage-gated channel subfamily A member 7 2 2
MIRT541156 PABPC1 poly(A) binding protein cytoplasmic 1 2 4
MIRT541745 ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 2 2
MIRT542029 PEX2 peroxisomal biogenesis factor 2 2 2
MIRT542036 PTRF caveolae associated protein 1 2 2
MIRT542127 DIS3L DIS3 like exosome 3'-5' exoribonuclease 2 2
MIRT542252 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT542354 MED16 mediator complex subunit 16 2 2
MIRT542466 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT542505 WDR13 WD repeat domain 13 2 2
MIRT542712 RPS15A ribosomal protein S15a 2 2
MIRT542958 FOXK1 forkhead box K1 2 2
MIRT543179 FICD FIC domain containing 2 2
MIRT552884 WASL Wiskott-Aldrich syndrome like 2 4
MIRT554997 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT555187 PRUNE2 prune homolog 2 2 2
MIRT555236 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT555451 POLR3A RNA polymerase III subunit A 2 2
MIRT557811 FOXO1 forkhead box O1 2 4
MIRT558161 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT558753 CHERP calcium homeostasis endoplasmic reticulum protein 2 2
MIRT558765 CFL2 cofilin 2 2 2
MIRT559114 C16orf52 chromosome 16 open reading frame 52 2 2
MIRT561823 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT562486 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 2
MIRT566139 RACGAP1 Rac GTPase activating protein 1 2 2
MIRT566951 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT566965 LBR lamin B receptor 2 2
MIRT567845 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT568209 CAV1 caveolin 1 2 2
MIRT568398 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT569177 DMD dystrophin 2 2
MIRT570687 FZD5 frizzled class receptor 5 2 2
MIRT572245 ANP32E acidic nuclear phosphoprotein 32 family member E 2 2
MIRT572662 AGMAT agmatinase 2 4
MIRT575209 Piwil2 piwi-like RNA-mediated gene silencing 2 2 5
MIRT575985 Fem1a feminization 1 homolog a (C. elegans) 2 5
MIRT606843 FEM1A fem-1 homolog A 2 7
MIRT608364 PIWIL2 piwi like RNA-mediated gene silencing 2 2 7
MIRT608734 MYH9 myosin heavy chain 9 2 2
MIRT612598 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT614247 WDR53 WD repeat domain 53 2 4
MIRT615162 SPIB Spi-B transcription factor 2 2
MIRT615467 BNC2 basonuclin 2 2 2
MIRT615812 COQ7 coenzyme Q7, hydroxylase 2 2
MIRT619490 QSOX2 quiescin sulfhydryl oxidase 2 2 2
MIRT619825 POLM DNA polymerase mu 2 4
MIRT623527 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT624353 CHRM3 cholinergic receptor muscarinic 3 2 2
MIRT625978 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT626207 PNRC1 proline rich nuclear receptor coactivator 1 2 4
MIRT626915 HIST1H2BG histone cluster 1 H2B family member g 2 2
MIRT628563 MELK maternal embryonic leucine zipper kinase 2 2
MIRT630116 PNPLA3 patatin like phospholipase domain containing 3 2 2
MIRT631328 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT631514 TTC4 tetratricopeptide repeat domain 4 2 2
MIRT633106 CBX5 chromobox 5 2 2
MIRT634084 APOH apolipoprotein H 2 2
MIRT634644 HIP1 huntingtin interacting protein 1 2 4
MIRT634941 GTF2H2C GTF2H2 family member C 2 4
MIRT639434 PKP1 plakophilin 1 2 2
MIRT640365 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT640717 CEP68 centrosomal protein 68 2 2
MIRT641216 TRIB1 tribbles pseudokinase 1 2 4
MIRT642272 SMIM17 small integral membrane protein 17 2 2
MIRT644010 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT645145 CUBN cubilin 2 2
MIRT645199 POLR3F RNA polymerase III subunit F 2 2
MIRT653159 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT654474 RANBP2 RAN binding protein 2 2 2
MIRT656176 MRPL44 mitochondrial ribosomal protein L44 2 2
MIRT658856 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT662111 LACTB lactamase beta 2 2
MIRT662393 ICA1L islet cell autoantigen 1 like 2 4
MIRT663405 SYT17 synaptotagmin 17 2 2
MIRT663852 LEPROTL1 leptin receptor overlapping transcript like 1 2 2
MIRT663934 ZNF554 zinc finger protein 554 2 2
MIRT664214 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT664379 CYB5A cytochrome b5 type A 2 2
MIRT672156 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT673120 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT676082 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT676772 SNX2 sorting nexin 2 2 2
MIRT677106 MFSD11 major facilitator superfamily domain containing 11 2 4
MIRT677142 DEGS1 delta 4-desaturase, sphingolipid 1 2 2
MIRT677247 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT677591 PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha 2 2
MIRT678311 NPHS1 NPHS1, nephrin 2 2
MIRT678528 P2RX7 purinergic receptor P2X 7 2 2
MIRT678732 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT679619 RRP36 ribosomal RNA processing 36 2 2
MIRT680134 ADRBK2 G protein-coupled receptor kinase 3 2 2
MIRT680358 GATAD1 GATA zinc finger domain containing 1 2 4
MIRT680685 ZNF785 zinc finger protein 785 2 2
MIRT681824 N4BP2L2 NEDD4 binding protein 2 like 2 2 2
MIRT683315 C19orf40 Fanconi anemia core complex associated protein 24 1 1
MIRT683384 ESR2 estrogen receptor 2 2 2
MIRT683490 ZNF7 zinc finger protein 7 2 2
MIRT683522 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT683687 MICA MHC class I polypeptide-related sequence A 2 2
MIRT683871 OCIAD1 OCIA domain containing 1 2 2
MIRT683942 MYLK3 myosin light chain kinase 3 2 2
MIRT683973 QRFPR pyroglutamylated RFamide peptide receptor 2 2
MIRT684048 FOLR1 folate receptor 1 2 2
MIRT684078 TLR7 toll like receptor 7 2 2
MIRT684130 CEP104 centrosomal protein 104 2 2
MIRT684356 BCAS4 breast carcinoma amplified sequence 4 2 2
MIRT684489 GPR137B G protein-coupled receptor 137B 2 2
MIRT684570 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT684613 GTF2IRD2B GTF2I repeat domain containing 2B 2 2
MIRT684645 PDE4C phosphodiesterase 4C 2 2
MIRT684709 LRRD1 leucine rich repeats and death domain containing 1 2 2
MIRT684740 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT684783 MYO1F myosin IF 2 2
MIRT684917 CD28 CD28 molecule 2 2
MIRT685193 DCTN5 dynactin subunit 5 2 2
MIRT685242 F2RL1 F2R like trypsin receptor 1 2 2
MIRT685312 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT685349 CCL5 C-C motif chemokine ligand 5 2 2
MIRT685574 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT685630 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT685658 C11orf1 chromosome 11 open reading frame 1 2 2
MIRT685707 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT685737 C12orf65 chromosome 12 open reading frame 65 2 2
MIRT685779 ZNF426 zinc finger protein 426 2 2
MIRT685879 RTN2 reticulon 2 2 2
MIRT685951 PTGIS prostaglandin I2 synthase 2 2
MIRT686103 TNIP3 TNFAIP3 interacting protein 3 2 2
MIRT686152 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT686281 WWC1 WW and C2 domain containing 1 2 2
MIRT686319 VPS53 VPS53, GARP complex subunit 2 2
MIRT686359 USP15 ubiquitin specific peptidase 15 2 2
MIRT686388 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT686440 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT686523 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT686692 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT686823 SLC7A11 solute carrier family 7 member 11 2 2
MIRT686879 SLC1A5 solute carrier family 1 member 5 2 2
MIRT686912 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT687042 RNF115 ring finger protein 115 2 2
MIRT687075 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT687250 PDHB pyruvate dehydrogenase E1 beta subunit 2 2
MIRT687401 NSUN4 NOP2/Sun RNA methyltransferase family member 4 2 2
MIRT687498 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 2
MIRT687645 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT687856 ISCA2 iron-sulfur cluster assembly 2 2 2
MIRT687927 HOOK3 hook microtubule tethering protein 3 2 2
MIRT687979 GTF2IRD2 GTF2I repeat domain containing 2 2 2
MIRT688110 GK5 glycerol kinase 5 (putative) 2 2
MIRT688121 GEMIN8 gem nuclear organelle associated protein 8 2 2
MIRT688213 FKBP14 FK506 binding protein 14 2 2
MIRT688270 FAM213A family with sequence similarity 213 member A 2 2
MIRT688465 DNAJB4 DnaJ heat shock protein family (Hsp40) member B4 2 2
MIRT688503 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT688633 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT688676 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT688826 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT689122 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT689170 ZNF665 zinc finger protein 665 2 2
MIRT689795 GTF2H3 general transcription factor IIH subunit 3 2 2
MIRT689842 HIST1H2BJ histone cluster 1 H2B family member j 2 2
MIRT690364 RPL37A ribosomal protein L37a 2 2
MIRT690736 IRAK4 interleukin 1 receptor associated kinase 4 2 2
MIRT690982 ZNF578 zinc finger protein 578 2 2
MIRT691073 NUGGC nuclear GTPase, germinal center associated 2 2
MIRT691328 KIAA1841 KIAA1841 2 2
MIRT691493 FOXRED2 FAD dependent oxidoreductase domain containing 2 2 2
MIRT691575 CCDC125 coiled-coil domain containing 125 2 2
MIRT692069 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT692105 CXorf38 chromosome X open reading frame 38 2 4
MIRT692209 NOL9 nucleolar protein 9 2 2
MIRT692319 RFK riboflavin kinase 2 2
MIRT692380 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT692441 METTL8 methyltransferase like 8 2 2
MIRT692542 PARD3 par-3 family cell polarity regulator 2 2
MIRT692605 GDF5OS growth differentiation factor 5 opposite strand 2 2
MIRT692786 SYNPO2L synaptopodin 2 like 2 2
MIRT692816 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT692877 RBM41 RNA binding motif protein 41 2 2
MIRT692988 LGSN lengsin, lens protein with glutamine synthetase domain 2 2
MIRT693195 MKI67 marker of proliferation Ki-67 2 2
MIRT693350 RNF34 ring finger protein 34 2 2
MIRT694107 ZNF446 zinc finger protein 446 2 2
MIRT694194 ZNF347 zinc finger protein 347 2 2
MIRT694661 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694815 STX4 syntaxin 4 2 2
MIRT694935 ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B 2 2
MIRT695181 SLC25A33 solute carrier family 25 member 33 2 2
MIRT695617 VBP1 VHL binding protein 1 2 2
MIRT695661 MAN2B2 mannosidase alpha class 2B member 2 2 2
MIRT695832 ABCG8 ATP binding cassette subfamily G member 8 2 2
MIRT695923 ZNF174 zinc finger protein 174 2 2
MIRT695973 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 2 2
MIRT696184 GNB5 G protein subunit beta 5 2 2
MIRT696444 SUGP1 SURP and G-patch domain containing 1 2 2
MIRT696861 UBOX5 U-box domain containing 5 2 2
MIRT696905 C14orf105 coiled-coil domain containing 198 2 2
MIRT697247 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697392 ZMAT3 zinc finger matrin-type 3 2 2
MIRT697984 TSPAN6 tetraspanin 6 2 2
MIRT698331 TMEM127 transmembrane protein 127 2 2
MIRT699267 SLC6A4 solute carrier family 6 member 4 2 2
MIRT699318 SLC35F5 solute carrier family 35 member F5 2 4
MIRT699634 SH3BP5 SH3 domain binding protein 5 2 2
MIRT699697 SF3B3 splicing factor 3b subunit 3 2 2
MIRT699768 SEMA4D semaphorin 4D 2 2
MIRT700047 RPL14 ribosomal protein L14 2 2
MIRT700104 RNF19B ring finger protein 19B 2 2
MIRT701110 PAPD5 poly(A) RNA polymerase D5, non-canonical 2 2
MIRT701296 NUDT3 nudix hydrolase 3 2 2
MIRT702050 METTL21A methyltransferase like 21A 2 2
MIRT702088 MCFD2 multiple coagulation factor deficiency 2 2 2
MIRT702381 KLF10 Kruppel like factor 10 2 2
MIRT702526 KCND3 potassium voltage-gated channel subfamily D member 3 2 2
MIRT702582 JARID2 jumonji and AT-rich interaction domain containing 2 2 2
MIRT702945 HIPK3 homeodomain interacting protein kinase 3 2 2
MIRT703093 GPRIN3 GPRIN family member 3 2 2
MIRT704010 EFCAB14 EF-hand calcium binding domain 14 2 2
MIRT704112 DRAXIN dorsal inhibitory axon guidance protein 2 2
MIRT704147 DNAL1 dynein axonemal light chain 1 2 2
MIRT704197 LDHD lactate dehydrogenase D 2 2
MIRT704445 CTNNB1 catenin beta 1 2 2
MIRT704764 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT705084 C4orf29 abhydrolase domain containing 18 2 2
MIRT705350 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT706108 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT706278 SLC35F6 solute carrier family 35 member F6 2 2
MIRT706313 CCDC30 coiled-coil domain containing 30 2 2
MIRT706353 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT706403 HAS2 hyaluronan synthase 2 2 2
MIRT706516 MTMR9 myotubularin related protein 9 2 2
MIRT707828 TMEM133 transmembrane protein 133 2 2
MIRT708370 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 2
MIRT708450 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT708513 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 2 2
MIRT709074 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT709507 RHOH ras homolog family member H 2 2
MIRT709539 ZBED1 zinc finger BED-type containing 1 2 2
MIRT711774 RFXAP regulatory factor X associated protein 2 2
MIRT714309 ZNF454 zinc finger protein 454 2 2
MIRT719073 ACOX1 acyl-CoA oxidase 1 2 2
MIRT719105 PCYT1A phosphate cytidylyltransferase 1, choline, alpha 2 2
MIRT719420 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT722311 DHCR24 24-dehydrocholesterol reductase 2 2
MIRT724552 HAUS2 HAUS augmin like complex subunit 2 2 2
MIRT737294 MYO18B myosin XVIIIB 2 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-520g Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-mir-520g Androstenedione+Letrozole resistant cell line (MCF-7)
hsa-miR-520g-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-520g-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-520g-3p Cisplatin 5460033 NSC119875 approved resistant High Germ Cell Tumor cell line (NTERA-2)
hsa-miR-520g-3p Cisplatin 5460033 NSC119875 approved resistant Low Epithelial Ovarian Cancer cell line (A2780)
hsa-miR-520g-3p Paclitaxel 36314 NSC125973 approved resistant Low Epithelial Ovarian Cancer cell line (A2780)
hsa-miR-520g-3p Trametinib 11707110 NSC758246 approved sensitive High Melanoma cell line (M14) (500nM)
hsa-miR-520g-3p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (M14) (500nM)
hsa-miR-520g-3p Bortezomib 387447 NSC681239 approved sensitive Low Multiple Myeloma cell line (RPMI-8266, H929)
hsa-miR-520g-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-520g-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-520g-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-520g-3p Paclitaxel 36314 NSC125973 approved resistant cell line (HS578T)
hsa-miR-520g-3p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-520g-3p Ethanol+Tamoxifen sensitive cell line (LY2)
hsa-miR-520g-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-520g-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-520g-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (T24)
hsa-miR-520g-3p Oxaliplatin 6857599 NSC266046 approved resistant cell line (IGROV-1)
hsa-miR-520g-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-520g-3p Cisplatin 5460033 NSC119875 approved resistant cell line (H460)
hsa-miR-520g-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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