miRTarBase - #MIRT004718


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pre-miRNA Information
pre-miRNA hsa-mir-196a-1   
Genomic Coordinates chr17: 48632490 - 48632559
Synonyms MIRN196-1, MIRN196A1, MIR196A1
Description Homo sapiens miR-196a-1 stem-loop
Comment Lagos-Quintana et al. .
RNA Secondary Structure
Associated Diseases
pre-miRNA hsa-mir-196a-2   
Genomic Coordinates chr12: 53991738 - 53991847
Synonyms MIRN196-2, MIRN196A2, MIR196A2
Description Homo sapiens miR-196a-2 stem-loop
Comment This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-196a-5p
Sequence 25| UAGGUAGUUUCAUGUUGUUGGG |46
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 6 17 - 48632548 29233923 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30188818 11 COSMIC
COSN30130427 18 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1449318187 1 dbSNP
rs1167097656 4 dbSNP
rs767877229 4 dbSNP
rs750731061 10 dbSNP
rs756640169 12 dbSNP
rs931027203 13 dbSNP
rs185070757 13 dbSNP
rs569910454 16 dbSNP
rs190478598 17 dbSNP
rs755062780 17 dbSNP
rs751887895 18 dbSNP
rs1422312414 20 dbSNP
rs372978481 21 dbSNP
rs1289240119 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol BACH1   
Synonyms BACH-1, BTBD24
Description BTB domain and CNC homolog 1
Transcript NM_001186   
Other Transcripts NM_206866   
Expression
Putative miRNA Targets on BACH1
3'UTR of BACH1
(miRNA target sites are highlighted)		 
>BACH1|NM_001186|3'UTR
   1 ACTTGCATTCACTTCCTTCAAACCATCTAATTTTCTCCTGAAGTTTTGGCAGCGTCTTGAAAGCCTAATATGACCATCTG
  81 TTGCTCAACAATACTGTTTTTTTCCTTTAGTAGTTTACCATAAGGGAATTTCCTTTAAGTCAACCATGATTTCTCCTTGA
 161 TTTCTACAAGAGACAAAGAAATGATTTTGCCTCCTGGATATCAGAAAAATCCATGTGAAAATGTAGTAAACCTTTAAAAC
 241 TCATGTTTTAAAGAATAATAACTCTAGTAATAACTCTTCCTGCTATTCAGAATAAGTAGGAGAATGAAAACTGCAGCATA
 321 TCAGACAGCAATTTAACAGCTTGAAACATCTACAGATAGTTCCTACTAAAAGAAGTGGCCTGCAGAAGTTTAATAATTTG
 401 ACTTTTTTCTAATATTTTAGTTTGAAAGAAAATTTCTTCCCAAGCAATGCTAATAGAGTTCTATTCTTAGAAGCAGGGTG
 481 TCAGCTACTGGGAATATTTTTGTAGAGCTGCATTGTGAAAAAAAGATGGTCTTACCTGAATCTTAGGGCTTTGTTCTTCG
 561 GCTCCTAAAATCAGGCTTTAAGCTACATTGGGAAGATTTAGTAAATAGGCAAGTGGTTGGCCTAAGACGGGGGCTGCTTC
 641 TCCTCTTCAGTATGGACTCTAGAAAGTCTGGCTACATGAATAGATTTAAGTGTCACTTTCCCTCCCTGCCCCCCGCTTCA
 721 GTCTCTACCATATCTGGTCCCATCATGGACTTCCTATTTCCTGGCATTTTTGTCCCTTTGGAAGAAGAAATAGGACTCAG
 801 AATACAGTGGCATGAGTGATTACACTGGCAGCATTATCTCAGGCTCCCTAGAATCTGGAGAGCTTACCAACATGTAAAGC
 881 TGTTCATTTTTCCACCGTGGGTCACCAATGCCAGAAAACCAGACATCACGGGGAAAGAATGTTGCTTACTTTTTACCAGG
 961 AGTGCAGTTCATTTTTTTCACCCTGTTTTTGAAGTCGTATTATTCACTTGTAAAAATGATTGTAACAGATAAAAAATGTA
1041 TCTGCAGCAACTCTGCAGGTTTGTGAAATAGGATGAAACTCAATCTTTTTCTATTGTGGGTTTGCATTTGAAAAGCAGGT
1121 TGAATCCTTGCTCTCTTCTCCAAATTTGGTGTGGTATAAAGACACACAAATCATTTTAACTTGGACATTTAAAGATCAGT
1201 CTTAGTGTTTGTTCAGTCCTGTTACAAAATAGATAACTGAGCACCTATCGCATAACATTTTGCGGTGGCTTTTAGCCATG
1281 CTGGGGTTAGATGTGTTTGAGAGTCAAATGAAAGCTATGGATCTTCTCAGCAATTAAAAAAAATGCATATATTCACATTC
1361 ACAGAAACATTGGCAGAACCCAGTTTTAATGGTACAGAGGAGTAGTTTATAGTGTTGATTTCACCAAAATCAGAGGGCTG
1441 AAAGAGACACTTCTATAGACTGCATCCTGAGCCTAGTGCAGGGCTTGTCTAGCTAATGTGGGCAGCCACCACCCACTGTG
1521 TATGAACAAGTCTGAAGCAAGTTGGCCTTGCCCTTGAGAGTATATGGGGACCAGTCTTCATGTCTTGGAGTAATTTGTCA
1601 AATGTTACCCTTTTTGATCAGGGTGTAGGGGGAGGATATTGCTAGTATATTTTCAGTGGTTTGTATGTTCTCTCTGTCAC
1681 TGACTTATTTGTAAGAGAAAATTAGTTGGACTTGTTTATTTTCTAGTAGCTTTTATAAGTACACTCAAGAATTTGTCAGG
1761 GAGAATAATTCTGATAGTGCATCCCATACTGCAAAAGAATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGT
1841 GTATGTATACATATATATCTCTCCATATAGGTATTTCTTTGATACTTGTAATTTTAAATTTCAGCTTCACGATATAAAAT
1921 AATATAAGAACTTCTGGTTTACAAAATGTAAAATCTTAAGCCAATGGAACCCTTGATTTCCTACCTCAGTGTACACCCAA
2001 CTATTGGTTGTATCAGTTTGTGTATGTGCAAATGTCAAATAATCTTTTGCTTTAATTGCTACTGTACTTGCTTTGAAAGA
2081 TTACCTACTATTTTATGATAAAATGTAGTTGTCTCCAGAGCTTAAATATAATTTGTAAAGCACTTGGTTTAAATTTCTCT
2161 CTACCTATAAACAGTTTAGCATTAAGGGTTTCTATTAATGACACAGAATTATTGGCCAAGTGTAATTTCTTAAAATTTAG
2241 CATTACTTTAAATAGCCAGCATGTAATACAAGTAACTACACTACCTCATATCTACATGATTTTCAAGTTGTAATGCAGAT
2321 GGACAGATAAAAAAGATTTTACGTTTGTCTTTTGGCCATAAGTGGGAAAGTTTTCTGTATATTGCATAGCATTACACATT
2401 TATGCCTATTTTAACATTAACTTCTAAAGAAGTTTTTTCTAAGAAAATGTTTCAAGGCAATATTTTTTTTGAGGCTGCCG
2481 AAGACAAATGACAGGATTATGAGTATACAGTGTATGCCTTTTCCTTCATGCAGAATTTTGAAATGTTTTCAGTTTGTATA
2561 TTGCATATTCACATGATCATTGTTCACTATTTTATGAACTGGCCTTCTCAATGTTTGATGATTTTTTAAAAGCTGTTATG
2641 TTGAATTCAGTAAAATAACATTACCTTATTTTTTTTCTTATTCAAATTCTGGAACTATAGCAAATAATTCGTTAAATTGT
2721 CATATTCAAAACAAATGTGGATACAGTCTTGGTTCTCCATCTGTAATTTTTTTTAACAGTTTGCTATAGCTTACTGCTTA
2801 ACTAATTTTAAATAAGGAAATAAGTATGTTAGATGCAGTAGACGATACAGGTTGCATGTGGACACTCAGTCACATTAACA
2881 ACTTGGGAAAAAAATGGCAATGTTACGGTGAATTCTCAGGTGAACTTTTTTCAGTTATAAAACATCTATTTTGAATCTGT
2961 AAATATTTTAAATGTTTTATTAAGGCATGTAATAAACTATTCTTTGAAACTTGTTGGGTAGAATGAAAATTAAAGCCATA
3041 ATGGTAGAAGATGGCATACTGATTATAAAAGAAGCAGAAAAACATTGATTTTTTTATATCTTTCATAATATAATTTTCTA
3121 ACAATGCAATAAAACCACTAAACTTTTGTGTCCATATTTTACTGAGACCATGTTTCATTAAAAGCATAGTTTCATAGTAT
3201 TTAATTTACATTTCTCCCTAATGTTCTTACCCAAATGTACCTGAACTAAAAAATGTTAGATGTTGGTGATAAGTTGACAG
3281 TTAAATAAAATTCTCTAAAATTGCTTCTAATTGAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggGUU-GUUGUACUUUGAUGGAu 5'
            ||| :||| | | ||||||| 
Target 5' taCAAGTAAC-T-ACACTACCTc 3'
 2267 - 2287 154.00 -10.40
2 
miRNA  3' ggGUUGUUGUACUUUGAUGGAu 5'
            ||::|| || | |:||||| 
Target 5' ttCAGTAAAATAACATTACCTt 3'
 2646 - 2667 152.00 -10.60
3 
miRNA  3' ggguuguuguACUU--UGAUGGAu 5'
                    ||||  |:||||| 
Target 5' gtacttgcttTGAAAGATTACCTa 3'
 2064 - 2087 134.00 -9.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN20137589 6 COSMIC
COSN31525927 22 COSMIC
COSN30454416 25 COSMIC
COSN30511908 27 COSMIC
COSN30114406 31 COSMIC
COSN31492799 36 COSMIC
COSN30137380 68 COSMIC
COSN30527414 72 COSMIC
COSN30132844 81 COSMIC
COSN30101444 85 COSMIC
COSN30527386 88 COSMIC
COSN30527394 110 COSMIC
COSN31605605 113 COSMIC
COSN32058739 133 COSMIC
COSN31551895 201 COSMIC
COSN20093855 379 COSMIC
COSN21317672 516 COSMIC
COSN29430483 563 COSMIC
COSN23750709 718 COSMIC
COSN8565244 754 COSMIC
COSN23629694 1012 COSMIC
COSN5984562 1139 COSMIC
COSN31533779 1440 COSMIC
COSN31572357 1468 COSMIC
COSN30175596 1507 COSMIC
COSN26639206 1519 COSMIC
COSN29468139 1554 COSMIC
COSN31484201 1580 COSMIC
COSN19662886 1589 COSMIC
COSN31546161 1633 COSMIC
COSN25902338 1691 COSMIC
COSN7143246 1828 COSMIC
COSN7143247 1834 COSMIC
COSN20116801 1836 COSMIC
COSN31488049 1838 COSMIC
COSN24899545 2076 COSMIC
COSN18843254 2158 COSMIC
COSN30164509 2162 COSMIC
COSN10025188 2173 COSMIC
COSN31591189 2256 COSMIC
COSN31592999 2286 COSMIC
COSN26643897 2325 COSMIC
COSN28201400 2428 COSMIC
COSN26142503 2827 COSMIC
COSN31547390 2830 COSMIC
COSN29439050 2841 COSMIC
COSN15671066 2903 COSMIC
COSN30159250 2907 COSMIC
COSN30227333 2940 COSMIC
COSN31569630 2991 COSMIC
COSN26549922 3036 COSMIC
COSN31529464 3069 COSMIC
COSN8611632 3099 COSMIC
COSN31548547 3198 COSMIC
COSN20093856 3245 COSMIC
rs372883 2584 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1039451647 2 dbSNP
rs753377049 7 dbSNP
rs1434877838 16 dbSNP
rs756664051 17 dbSNP
rs754543904 21 dbSNP
rs750036850 33 dbSNP
rs1490060637 37 dbSNP
rs1160924503 39 dbSNP
rs758068493 42 dbSNP
rs539853991 43 dbSNP
rs748500043 48 dbSNP
rs1429345754 51 dbSNP
rs371371948 52 dbSNP
rs200402827 55 dbSNP
rs888040846 60 dbSNP
rs1247084455 70 dbSNP
rs1237378951 71 dbSNP
rs1314092215 72 dbSNP
rs1284175326 73 dbSNP
rs1222964532 74 dbSNP
rs1055170673 76 dbSNP
rs1480221154 77 dbSNP
rs766663645 83 dbSNP
rs140520244 85 dbSNP
rs1385607398 88 dbSNP
rs1472864409 89 dbSNP
rs1010739740 97 dbSNP
rs1056826 106 dbSNP
rs528806832 110 dbSNP
rs1378992141 114 dbSNP
rs1451375811 114 dbSNP
rs1164331942 117 dbSNP
rs960692903 121 dbSNP
rs425989 122 dbSNP
rs2832285 127 dbSNP
rs1195237677 135 dbSNP
rs747808149 153 dbSNP
rs1429582149 157 dbSNP
rs1324378366 161 dbSNP
rs771782484 164 dbSNP
rs565373808 167 dbSNP
rs531025787 169 dbSNP
rs1484478510 179 dbSNP
rs1023662143 181 dbSNP
rs76618578 187 dbSNP
rs979291257 192 dbSNP
rs1280119723 198 dbSNP
rs554708928 199 dbSNP
rs925073542 205 dbSNP
rs1414668199 217 dbSNP
rs116544520 231 dbSNP
rs1294840883 242 dbSNP
rs1380305429 245 dbSNP
rs1408075602 254 dbSNP
rs1353579510 257 dbSNP
rs149979501 261 dbSNP
rs1172104916 265 dbSNP
rs1229525996 266 dbSNP
rs985034620 267 dbSNP
rs111703019 269 dbSNP
rs1372999201 271 dbSNP
rs1191757134 279 dbSNP
rs988460624 286 dbSNP
rs1244186430 290 dbSNP
rs1290234153 294 dbSNP
rs1306529349 311 dbSNP
rs1202823547 312 dbSNP
rs908071974 316 dbSNP
rs1483359183 319 dbSNP
rs912253593 327 dbSNP
rs2070401 332 dbSNP
rs1255506846 333 dbSNP
rs1473848436 336 dbSNP
rs1163903738 338 dbSNP
rs145211547 347 dbSNP
rs183046460 348 dbSNP
rs1315422451 353 dbSNP
rs1408401291 356 dbSNP
rs771314498 362 dbSNP
rs921031567 366 dbSNP
rs939064148 369 dbSNP
rs1410039338 375 dbSNP
rs1170914746 379 dbSNP
rs558414785 391 dbSNP
rs931020489 401 dbSNP
rs1049239927 403 dbSNP
rs1459855951 403 dbSNP
rs1371492042 405 dbSNP
rs1163263390 409 dbSNP
rs1443231606 412 dbSNP
rs887936737 419 dbSNP
rs1182848623 420 dbSNP
rs1437290203 423 dbSNP
rs1434659515 435 dbSNP
rs1005175669 437 dbSNP
rs141400608 440 dbSNP
rs1342780349 444 dbSNP
rs145172120 448 dbSNP
rs568743593 453 dbSNP
rs751530924 457 dbSNP
rs896520851 461 dbSNP
rs1244962713 463 dbSNP
rs1357102066 466 dbSNP
rs1280898480 479 dbSNP
rs1442554544 486 dbSNP
rs1334828393 508 dbSNP
rs1013553277 514 dbSNP
rs1406251724 518 dbSNP
rs1366671988 523 dbSNP
rs1225679190 524 dbSNP
rs1423096613 524 dbSNP
rs777228825 533 dbSNP
rs1159530844 544 dbSNP
rs902414776 551 dbSNP
rs62211403 557 dbSNP
rs372740743 560 dbSNP
rs1001348667 561 dbSNP
rs1490549626 563 dbSNP
rs1269519816 568 dbSNP
rs1032215258 571 dbSNP
rs1221713293 583 dbSNP
rs1489790397 587 dbSNP
rs1276496424 593 dbSNP
rs75761308 602 dbSNP
rs1349424777 603 dbSNP
rs1188388432 608 dbSNP
rs775788114 610 dbSNP
rs186728760 612 dbSNP
rs996660571 613 dbSNP
rs565019060 623 dbSNP
rs1319311388 628 dbSNP
rs574568273 629 dbSNP
rs73195611 632 dbSNP
rs573467161 634 dbSNP
rs1434563549 637 dbSNP
rs1172133191 640 dbSNP
rs887766076 645 dbSNP
rs975080487 661 dbSNP
rs1197393940 662 dbSNP
rs745719284 663 dbSNP
rs931114609 666 dbSNP
rs1243782437 676 dbSNP
rs1006504398 680 dbSNP
rs1446271041 684 dbSNP
rs1281659116 688 dbSNP
rs1323836188 703 dbSNP
rs1282043110 709 dbSNP
rs764468614 710 dbSNP
rs1364625629 713 dbSNP
rs1015205123 714 dbSNP
rs1344025760 715 dbSNP
rs750161428 716 dbSNP
rs981641681 720 dbSNP
rs1299437517 722 dbSNP
rs1036229776 727 dbSNP
rs1233341346 731 dbSNP
rs909406897 733 dbSNP
rs1470399255 738 dbSNP
rs374991512 746 dbSNP
rs1272830121 755 dbSNP
rs1174285798 764 dbSNP
rs118026035 766 dbSNP
rs566120745 768 dbSNP
rs1187078415 776 dbSNP
rs748837390 799 dbSNP
rs1283673542 808 dbSNP
rs1463646780 817 dbSNP
rs1245909782 822 dbSNP
rs896762222 830 dbSNP
rs1262133619 847 dbSNP
rs913167091 848 dbSNP
rs1248926051 849 dbSNP
rs1201211278 871 dbSNP
rs916270736 877 dbSNP
rs1274290911 896 dbSNP
rs1013756077 897 dbSNP
rs1214554963 898 dbSNP
rs1045077345 902 dbSNP
rs565473880 905 dbSNP
rs979037888 909 dbSNP
rs753833826 912 dbSNP
rs1382236178 916 dbSNP
rs905188775 919 dbSNP
rs1406405196 924 dbSNP
rs1444459663 925 dbSNP
rs935202874 929 dbSNP
rs575700856 930 dbSNP
rs1321931114 931 dbSNP
rs1388253852 936 dbSNP
rs1388979519 937 dbSNP
rs191170196 938 dbSNP
rs1032826276 940 dbSNP
rs1242135516 943 dbSNP
rs1179792897 945 dbSNP
rs901663234 945 dbSNP
rs754383387 949 dbSNP
rs1340578907 950 dbSNP
rs1050484080 959 dbSNP
rs1332552120 959 dbSNP
rs561332310 961 dbSNP
rs1359259240 962 dbSNP
rs1233693047 983 dbSNP
rs767738697 996 dbSNP
rs1006242100 997 dbSNP
rs1297613849 998 dbSNP
rs533740219 1006 dbSNP
rs796403806 1019 dbSNP
rs1440124993 1027 dbSNP
rs1368615354 1028 dbSNP
rs1304948593 1031 dbSNP
rs1326958188 1031 dbSNP
rs1230363720 1035 dbSNP
rs1268800283 1037 dbSNP
rs1420464690 1039 dbSNP
rs546991910 1040 dbSNP
rs1408275785 1048 dbSNP
rs1176070101 1049 dbSNP
rs1009420859 1051 dbSNP
rs1019417447 1060 dbSNP
rs73897766 1073 dbSNP
rs1490335982 1077 dbSNP
rs1003535211 1078 dbSNP
rs752883952 1078 dbSNP
rs1035897732 1081 dbSNP
rs1306628437 1082 dbSNP
rs1222136079 1083 dbSNP
rs959108159 1084 dbSNP
rs1452605284 1088 dbSNP
rs1347506524 1091 dbSNP
rs991593763 1094 dbSNP
rs1405434179 1095 dbSNP
rs1364923110 1110 dbSNP
rs975321740 1121 dbSNP
rs1181530630 1132 dbSNP
rs8133805 1158 dbSNP
rs952466174 1159 dbSNP
rs1455168098 1160 dbSNP
rs1473842931 1182 dbSNP
rs1345405474 1187 dbSNP
rs558290148 1193 dbSNP
rs867904987 1207 dbSNP
rs979067509 1227 dbSNP
rs923604572 1230 dbSNP
rs552232753 1232 dbSNP
rs1412006241 1236 dbSNP
rs1199552249 1245 dbSNP
rs983916137 1248 dbSNP
rs569144228 1250 dbSNP
rs374218313 1251 dbSNP
rs1486434910 1252 dbSNP
rs1392430945 1253 dbSNP
rs1260327888 1255 dbSNP
rs1207111051 1258 dbSNP
rs972212980 1264 dbSNP
rs537617555 1265 dbSNP
rs949676534 1267 dbSNP
rs1222990450 1270 dbSNP
rs1330393453 1281 dbSNP
rs116050947 1287 dbSNP
rs1383704385 1294 dbSNP
rs905218975 1295 dbSNP
rs936678962 1299 dbSNP
rs1348581134 1306 dbSNP
rs1411544797 1309 dbSNP
rs1465478163 1320 dbSNP
rs1287902773 1333 dbSNP
rs1176446886 1336 dbSNP
rs1407851901 1336 dbSNP
rs78223123 1336 dbSNP
rs140665065 1337 dbSNP
rs1376421156 1346 dbSNP
rs1009623737 1347 dbSNP
rs1019494366 1348 dbSNP
rs1429457710 1350 dbSNP
rs1261407891 1357 dbSNP
rs1187105056 1358 dbSNP
rs1334173494 1366 dbSNP
rs758027475 1375 dbSNP
rs1264008643 1380 dbSNP
rs996792334 1385 dbSNP
rs1242678523 1393 dbSNP
rs1028646383 1396 dbSNP
rs1343043683 1397 dbSNP
rs551439979 1397 dbSNP
rs1229589116 1398 dbSNP
rs553343829 1412 dbSNP
rs1308037627 1413 dbSNP
rs777445695 1420 dbSNP
rs952630688 1423 dbSNP
rs370358519 1431 dbSNP
rs1307812099 1434 dbSNP
rs1015222110 1437 dbSNP
rs1337058012 1444 dbSNP
rs576811291 1451 dbSNP
rs1399493928 1456 dbSNP
rs747298083 1459 dbSNP
rs1250001650 1469 dbSNP
rs1373017338 1476 dbSNP
rs1167042483 1491 dbSNP
rs771351821 1493 dbSNP
rs1183465728 1496 dbSNP
rs539422529 1498 dbSNP
rs558943125 1503 dbSNP
rs894697101 1504 dbSNP
rs1013046486 1507 dbSNP
rs918108273 1515 dbSNP
rs1252700849 1526 dbSNP
rs1196459475 1533 dbSNP
rs182310641 1546 dbSNP
rs1422805675 1551 dbSNP
rs199882806 1554 dbSNP
rs1369888729 1557 dbSNP
rs1458053280 1561 dbSNP
rs1361374605 1563 dbSNP
rs1167764823 1571 dbSNP
rs1000560643 1575 dbSNP
rs762429295 1576 dbSNP
rs1030693616 1580 dbSNP
rs926884106 1610 dbSNP
rs1330238197 1616 dbSNP
rs936897604 1622 dbSNP
rs186536778 1628 dbSNP
rs1370474668 1639 dbSNP
rs975752829 1642 dbSNP
rs1426912184 1660 dbSNP
rs892459822 1667 dbSNP
rs1354738552 1669 dbSNP
rs574967596 1671 dbSNP
rs923196121 1674 dbSNP
rs953244233 1688 dbSNP
rs1182601408 1689 dbSNP
rs945485155 1696 dbSNP
rs1314908973 1698 dbSNP
rs1341317302 1712 dbSNP
rs373169901 1713 dbSNP
rs1202991363 1717 dbSNP
rs540769034 1718 dbSNP
rs901037325 1730 dbSNP
rs560534082 1736 dbSNP
rs1028134027 1737 dbSNP
rs1353753174 1741 dbSNP
rs888365516 1742 dbSNP
rs909044479 1754 dbSNP
rs1206313022 1758 dbSNP
rs1005434620 1763 dbSNP
rs942128165 1770 dbSNP
rs1323238960 1772 dbSNP
rs1404007965 1773 dbSNP
rs1036435669 1782 dbSNP
rs1015713554 1789 dbSNP
rs919325523 1795 dbSNP
rs532354200 1798 dbSNP
rs1201720078 1799 dbSNP
rs1056828 1801 dbSNP
rs1269541436 1801 dbSNP
rs10595449 1802 dbSNP
rs1178609305 1802 dbSNP
rs1224832681 1802 dbSNP
rs1319411865 1802 dbSNP
rs1362187129 1802 dbSNP
rs1386729188 1802 dbSNP
rs141642990 1802 dbSNP
rs1456873119 1802 dbSNP
rs1470379098 1802 dbSNP
rs72415240 1802 dbSNP
rs72435520 1802 dbSNP
rs748985747 1802 dbSNP
rs879245646 1802 dbSNP
rs1424036066 1803 dbSNP
rs1425785112 1810 dbSNP
rs1187480964 1811 dbSNP
rs1171970295 1815 dbSNP
rs1387921775 1818 dbSNP
rs894722167 1818 dbSNP
rs1193674311 1824 dbSNP
rs1464111016 1824 dbSNP
rs1245873830 1826 dbSNP
rs1451171359 1830 dbSNP
rs866139044 1830 dbSNP
rs1168958186 1832 dbSNP
rs867846259 1832 dbSNP
rs1024018862 1833 dbSNP
rs1271065473 1834 dbSNP
rs1358551510 1834 dbSNP
rs57296177 1835 dbSNP
rs1358709005 1836 dbSNP
rs1491070374 1836 dbSNP
rs969753484 1836 dbSNP
rs1043237656 1838 dbSNP
rs868863159 1838 dbSNP
rs926775732 1840 dbSNP
rs143788431 1843 dbSNP
rs1168932345 1844 dbSNP
rs1448713484 1855 dbSNP
rs1000596380 1860 dbSNP
rs1031189458 1864 dbSNP
rs1434450967 1865 dbSNP
rs1295764986 1881 dbSNP
rs1400877891 1887 dbSNP
rs1367586650 1895 dbSNP
rs989747273 1897 dbSNP
rs1229673280 1898 dbSNP
rs1340538637 1904 dbSNP
rs956456433 1911 dbSNP
rs913930553 1912 dbSNP
rs1378760636 1914 dbSNP
rs1301098303 1919 dbSNP
rs570493255 1926 dbSNP
rs1029959325 1939 dbSNP
rs945348008 1945 dbSNP
rs953315546 1956 dbSNP
rs192587100 1965 dbSNP
rs909075793 1966 dbSNP
rs754385696 1984 dbSNP
rs368322 1998 dbSNP
rs567955844 2004 dbSNP
rs1483323447 2008 dbSNP
rs932714600 2010 dbSNP
rs1412634679 2012 dbSNP
rs1179592809 2014 dbSNP
rs1207548926 2014 dbSNP
rs527383058 2014 dbSNP
rs1470917852 2015 dbSNP
rs1245856859 2016 dbSNP
rs1253131213 2025 dbSNP
rs148004426 2027 dbSNP
rs569828511 2035 dbSNP
rs570535505 2046 dbSNP
rs1188994823 2055 dbSNP
rs919342650 2058 dbSNP
rs1321288406 2067 dbSNP
rs938740626 2068 dbSNP
rs1057450937 2069 dbSNP
rs556775391 2071 dbSNP
rs371506082 2078 dbSNP
rs1409090070 2083 dbSNP
rs1378134196 2085 dbSNP
rs1304666790 2087 dbSNP
rs575135387 2089 dbSNP
rs775698125 2093 dbSNP
rs1162311599 2096 dbSNP
rs1043269819 2103 dbSNP
rs1412004885 2105 dbSNP
rs763172879 2106 dbSNP
rs374563676 2107 dbSNP
rs1192129298 2118 dbSNP
rs1488380928 2128 dbSNP
rs1263880171 2131 dbSNP
rs1218153514 2133 dbSNP
rs1330118867 2143 dbSNP
rs1391142928 2148 dbSNP
rs1226660154 2152 dbSNP
rs768966846 2162 dbSNP
rs934845239 2164 dbSNP
rs1436038301 2166 dbSNP
rs1293313771 2170 dbSNP
rs1366709361 2173 dbSNP
rs1053259800 2178 dbSNP
rs1432415927 2180 dbSNP
rs892215513 2182 dbSNP
rs1221283900 2195 dbSNP
rs1455242963 2201 dbSNP
rs1432080673 2202 dbSNP
rs1177483849 2205 dbSNP
rs1302665836 2205 dbSNP
rs1013891855 2213 dbSNP
rs539028745 2214 dbSNP
rs183066476 2217 dbSNP
rs1465464391 2221 dbSNP
rs969786218 2225 dbSNP
rs1247702902 2233 dbSNP
rs1227297834 2235 dbSNP
rs188406303 2240 dbSNP
rs1257671535 2242 dbSNP
rs1233825920 2243 dbSNP
rs549572982 2249 dbSNP
rs538569677 2266 dbSNP
rs543283944 2289 dbSNP
rs1437026424 2303 dbSNP
rs1245923571 2314 dbSNP
rs958215153 2317 dbSNP
rs367811278 2321 dbSNP
rs536658555 2329 dbSNP
rs1319556719 2332 dbSNP
rs764422320 2336 dbSNP
rs760336315 2340 dbSNP
rs141698952 2343 dbSNP
rs575131393 2344 dbSNP
rs1465917294 2347 dbSNP
rs1268034629 2348 dbSNP
rs976752813 2350 dbSNP
rs922564232 2355 dbSNP
rs1172972458 2357 dbSNP
rs932764134 2359 dbSNP
rs1450553872 2364 dbSNP
rs1026144299 2373 dbSNP
rs1056829 2376 dbSNP
rs1056830 2380 dbSNP
rs909735126 2382 dbSNP
rs1462844585 2384 dbSNP
rs1256905983 2387 dbSNP
rs1199947132 2390 dbSNP
rs941215950 2397 dbSNP
rs1036799555 2406 dbSNP
rs193192784 2409 dbSNP
rs1457979408 2414 dbSNP
rs1014090850 2417 dbSNP
rs948740120 2429 dbSNP
rs1296623514 2433 dbSNP
rs978706203 2433 dbSNP
rs1164420592 2434 dbSNP
rs1312738381 2437 dbSNP
rs553943646 2442 dbSNP
rs542534298 2447 dbSNP
rs530795242 2448 dbSNP
rs1430784025 2449 dbSNP
rs1370289108 2458 dbSNP
rs397867648 2463 dbSNP
rs5843379 2463 dbSNP
rs201276074 2471 dbSNP
rs545858051 2480 dbSNP
rs562938450 2481 dbSNP
rs1051504476 2493 dbSNP
rs1285912467 2494 dbSNP
rs1330529579 2506 dbSNP
rs1223837554 2507 dbSNP
rs892851243 2510 dbSNP
rs1483357659 2512 dbSNP
rs552567507 2513 dbSNP
rs1273560919 2515 dbSNP
rs571053589 2517 dbSNP
rs1011093312 2519 dbSNP
rs1319533578 2528 dbSNP
rs1223527904 2530 dbSNP
rs753647920 2531 dbSNP
rs150503689 2536 dbSNP
rs1482690650 2537 dbSNP
rs1284492554 2551 dbSNP
rs1007239173 2553 dbSNP
rs531493446 2561 dbSNP
rs1338239463 2574 dbSNP
rs1289706468 2578 dbSNP
rs966960920 2580 dbSNP
rs372883 2584 dbSNP
rs1181320568 2585 dbSNP
rs1407498401 2590 dbSNP
rs1391723029 2602 dbSNP
rs1162932755 2604 dbSNP
rs1029690838 2608 dbSNP
rs1365567326 2622 dbSNP
rs899120584 2623 dbSNP
rs1411956312 2640 dbSNP
rs1179742082 2646 dbSNP
rs561652343 2650 dbSNP
rs1453150906 2654 dbSNP
rs954057628 2660 dbSNP
rs985836291 2661 dbSNP
rs73342485 2665 dbSNP
rs75903526 2670 dbSNP
rs1428394608 2681 dbSNP
rs972545712 2684 dbSNP
rs918409291 2686 dbSNP
rs138680753 2689 dbSNP
rs1310448272 2695 dbSNP
rs1287081286 2698 dbSNP
rs116143045 2701 dbSNP
rs1442368366 2706 dbSNP
rs1332091047 2710 dbSNP
rs1323344639 2711 dbSNP
rs1045607271 2720 dbSNP
rs1283041877 2722 dbSNP
rs905556734 2723 dbSNP
rs1456840573 2726 dbSNP
rs1411103653 2730 dbSNP
rs546147264 2745 dbSNP
rs925956290 2746 dbSNP
rs1247029495 2751 dbSNP
rs1054508231 2752 dbSNP
rs892889155 2758 dbSNP
rs1229611709 2760 dbSNP
rs1449459079 2764 dbSNP
rs1208810704 2767 dbSNP
rs934941521 2767 dbSNP
rs11532 2776 dbSNP
rs1327917188 2784 dbSNP
rs1009956698 2787 dbSNP
rs1221391450 2795 dbSNP
rs1346330614 2810 dbSNP
rs1315486819 2818 dbSNP
rs1274568184 2834 dbSNP
rs1021168778 2844 dbSNP
rs902681602 2857 dbSNP
rs998466360 2863 dbSNP
rs1202759130 2864 dbSNP
rs934195631 2865 dbSNP
rs1029932384 2873 dbSNP
rs1386478545 2877 dbSNP
rs1276736593 2885 dbSNP
rs1416036341 2888 dbSNP
rs1425803537 2888 dbSNP
rs954416043 2889 dbSNP
rs1438300098 2891 dbSNP
rs752173834 2894 dbSNP
rs1452421929 2896 dbSNP
rs549496011 2898 dbSNP
rs553398278 2900 dbSNP
rs1391601523 2901 dbSNP
rs1017312300 2907 dbSNP
rs569706449 2908 dbSNP
rs1245591700 2913 dbSNP
rs538533171 2926 dbSNP
rs1443480787 2932 dbSNP
rs1278614554 2936 dbSNP
rs1344818073 2939 dbSNP
rs962859746 2939 dbSNP
rs972788070 2947 dbSNP
rs1182601908 2958 dbSNP
rs898816098 2960 dbSNP
rs555253037 2967 dbSNP
rs1448922613 2975 dbSNP
rs762023795 2989 dbSNP
rs1333477876 2995 dbSNP
rs949875704 2998 dbSNP
rs1047656756 3000 dbSNP
rs1448118629 3008 dbSNP
rs1372127714 3011 dbSNP
rs895693202 3020 dbSNP
rs1170853744 3032 dbSNP
rs1183086938 3036 dbSNP
rs1371741454 3039 dbSNP
rs1014097899 3042 dbSNP
rs1414365949 3047 dbSNP
rs15092 3048 dbSNP
rs970156191 3052 dbSNP
rs1356876916 3053 dbSNP
rs1000231340 3059 dbSNP
rs1033005135 3078 dbSNP
rs763689042 3079 dbSNP
rs1228934529 3089 dbSNP
rs1292375155 3089 dbSNP
rs1315389063 3089 dbSNP
rs73342486 3092 dbSNP
rs1225962899 3094 dbSNP
rs1299483099 3096 dbSNP
rs1352267883 3097 dbSNP
rs937216888 3099 dbSNP
rs751239237 3101 dbSNP
rs80248595 3102 dbSNP
rs1352368013 3105 dbSNP
rs922884803 3106 dbSNP
rs577253658 3107 dbSNP
rs189969446 3108 dbSNP
rs757496795 3111 dbSNP
rs955771841 3112 dbSNP
rs79077501 3114 dbSNP
rs1204378471 3121 dbSNP
rs1488797973 3125 dbSNP
rs1253242540 3130 dbSNP
rs1181904097 3131 dbSNP
rs1479886223 3137 dbSNP
rs901564063 3144 dbSNP
rs750945531 3147 dbSNP
rs1321384481 3150 dbSNP
rs1287738331 3162 dbSNP
rs998373083 3178 dbSNP
rs1230369008 3185 dbSNP
rs1331124018 3187 dbSNP
rs781616525 3196 dbSNP
rs1408964997 3197 dbSNP
rs1051661589 3198 dbSNP
rs1463676323 3218 dbSNP
rs1295100768 3219 dbSNP
rs890049532 3221 dbSNP
rs575982438 3224 dbSNP
rs541832561 3227 dbSNP
rs561613464 3230 dbSNP
rs943128256 3239 dbSNP
rs1037437080 3240 dbSNP
rs1413303673 3257 dbSNP
rs1159142463 3258 dbSNP
rs1417881108 3286 dbSNP
rs920314982 3296 dbSNP
rs962666862 3302 dbSNP
rs1488269599 3304 dbSNP
rs1251438388 3310 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Huh7.5 , 9-13 , Con1
Disease TGACCTGGTTCTGGGCTCTCAC;
Location of target site 3'UTR
Tools used in this research TargetScan
Original Description (Extracted from the article) ... "functional miR-196 binding sites in the 3`-UTR of Bach1 ...

- Hou W; Tian Q; Zheng J; Bonkovsky HL, 2010, Hepatology (Baltimore, Md.).

Article - Hou W; Tian Q; Zheng J; Bonkovsky HL
- Hepatology (Baltimore, Md.), 2010
UNLABELLED: Hepatitis C virus (HCV) directly induces oxidative stress and liver injury. Bach1, a basic leucine zipper mammalian transcriptional repressor, negatively regulates heme oxygenase 1 (HMOX1), a key cytoprotective enzyme that has antioxidant and anti-inflammatory activities. microRNAs (miRNAs) are small noncoding RNAs ( approximately 22 nt) that are important regulators of gene expression. Whether and how miRNAs regulate Bach1 or HCV are largely unknown. The aims of this study were to determine whether miR-196 regulates Bach1, HMOX1, and/or HCV gene expression. HCV replicon cell lines (Con1 and 9-13) of the Con1 isolate and J6/JFH1-based HCV cell culture system were used in this study. The effects of miR-196 mimic on Bach1, HMOX1, and HCV RNA, and protein levels were measured by way of quantitative real-time polymerase chain reaction (qRT-PCR) and Western blotting, respectively. The Dual Glo Luciferase Assay System was used to determine reporter activities. miR-196 mimic significantly down-regulated Bach1 and up-regulated HMOX1 gene expression and inhibited HCV expression. Dual luciferase reporter assays demonstrated that transfection of miR-196 mimic resulted in a significant decrease in Bach1 3'-untranslated region (UTR)-dependent luciferase activity but not in mutant Bach1 3'-UTR-dependent luciferase activity. Moreover, there was no detectable effect of mutant miR-196 on Bach1 3'-UTR-dependent luciferase activity. CONCLUSION: miR-196 directly acts on the 3'-UTR of Bach1 messenger RNA and translationally represses the expression of this protein, and up-regulates HMOX1. miR-196 also inhibits HCV expression in HCV replicon cell lines (genotype 1b) and in J6/JFH1 (genotype 2a) HCV cell culture system. Thus, miR-196 plays a role in both HMOX1/Bach1 expression and the regulation of HCV expression in human hepatocytes. Overexpression of miR-196 holds promise as a potential novel strategy to prevent or ameliorate hepatitis C infection, and to protect against liver injury in chronic HCV infection.
LinkOut: [PMID: 20127796]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000286800.3 | 3UTR | UUUAGCAUUACUUUAAAUAGCCAGCAUGUAAUACAAGUAACUACACUACCUCAUAUCUACAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla -0.451 6.1e-2 -0.363 1.1e-1 13 Click to see details
GSE17306 Multiple myeloma -0.211 7.3e-2 -0.127 1.9e-1 49 Click to see details
GSE17498 Multiple myeloma -0.197 1.1e-1 -0.213 9.3e-2 40 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.242 1.2e-1 0.268 9.8e-2 25 Click to see details
GSE21687 Ependynoma primary tumors 0.143 1.3e-1 0.229 3.4e-2 64 Click to see details
GSE14794 Lymphoblastoid cells 0.112 1.5e-1 0.152 7.6e-2 90 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.204 1.6e-1 0.075 3.6e-1 25 Click to see details
GSE27834 Pluripotent stem cells 0.261 1.6e-1 0.215 2.1e-1 16 Click to see details
GSE38226 Liver fibrosis 0.219 1.7e-1 -0.148 2.6e-1 21 Click to see details
GSE32688 Pancreatic cancer -0.158 1.9e-1 -0.077 3.4e-1 32 Click to see details
GSE21849 B cell lymphoma 0.162 2.0e-1 0.356 2.9e-2 29 Click to see details
GSE42095 Differentiated embryonic stem cells 0.115 3.0e-1 -0.036 4.4e-1 23 Click to see details
GSE19350 CNS germ cell tumors -0.118 3.6e-1 -0.091 3.9e-1 12 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.056 4.1e-1 -0.508 1.1e-2 20 Click to see details
GSE19783 ER+ ER+ breast cancer 0.055 4.1e-1 0.060 4.0e-1 20 Click to see details
GSE19536 Breast cancer -0.015 4.4e-1 0.010 4.6e-1 100 Click to see details
GSE21032 Prostate cancer 0.015 4.5e-1 -0.013 4.5e-1 83 Click to see details
GSE19783 ER- ER- breast cancer -0.015 4.5e-1 0.022 4.2e-1 79 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.046 4.5e-1 0.017 4.8e-1 9 Click to see details
GSE26953 Aortic valvular endothelial cells 0.005 4.9e-1 -0.131 2.7e-1 24 Click to see details
GSE28544 Breast cancer 0 5.0e-1 -0.136 2.6e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
PRAD -0.587 0 -0.639 0 50 Click to see details
STAD 0.36 0.02 0.317 0.04 31 Click to see details
THCA 0.2 0.09 0.136 0.18 47 Click to see details
BRCA 0.127 0.12 0.036 0.37 84 Click to see details
KIRP 0.205 0.13 0.222 0.11 32 Click to see details
PAAD 0.633 0.18 0.800 0.1 4 Click to see details
CESC 0.832 0.19 1.000 0.5 3 Click to see details
UCEC 0.201 0.2 0.326 0.09 19 Click to see details
LIHC -0.127 0.23 -0.004 0.49 37 Click to see details
BLCA -0.174 0.24 -0.174 0.24 18 Click to see details
ESCA 0.223 0.25 0.309 0.18 11 Click to see details
PCPG -0.539 0.32 -0.500 0.33 3 Click to see details
HNSC -0.069 0.33 -0.075 0.32 42 Click to see details
KICH -0.075 0.36 -0.051 0.4 25 Click to see details
COAD 0.095 0.41 -0.190 0.33 8 Click to see details
KIRC -0.023 0.43 -0.119 0.17 68 Click to see details
LUAD -0.055 0.44 -0.055 0.44 11 Click to see details
CHOL 0.047 0.46 0.000 0.5 8 Click to see details
LUSC 0.012 0.47 -0.026 0.44 38 Click to see details
LUSC 0.012 0.47 -0.026 0.44 38 Click to see details
LUSC 0.012 0.47 -0.026 0.44 38 Click to see details
301 hsa-miR-196a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000218 BMP4 bone morphogenetic protein 4 1 1
MIRT000219 SPRR2C small proline rich protein 2C (pseudogene) 3 2
MIRT000220 S100A9 S100 calcium binding protein A9 3 2
MIRT000221 KRT5 keratin 5 3 2
MIRT000709 ANXA1 annexin A1 4 2
MIRT002266 HOXB8 homeobox B8 5 7
MIRT002940 HOXA7 homeobox A7 4 5
MIRT002941 HOXD8 homeobox D8 3 3
MIRT002942 HOXC8 homeobox C8 6 15
MIRT004244 HOXB7 homeobox B7 4 1
MIRT004718 BACH1 BTB domain and CNC homolog 1 6 3
MIRT004719 HMOX1 heme oxygenase 1 4 1
MIRT005065 CDKN1B cyclin dependent kinase inhibitor 1B 6 7
MIRT006802 HMGA1 high mobility group AT-hook 1 5 5
MIRT006803 HMGA2 high mobility group AT-hook 2 5 7
MIRT006906 HOXA5 homeobox A5 5 3
MIRT026026 IKBKB inhibitor of nuclear factor kappa B kinase subunit beta 1 1
MIRT026027 PDCD4 programmed cell death 4 1 1
MIRT026028 SRRT serrate, RNA effector molecule 2 9
MIRT026029 DIEXF digestive organ expansion factor homolog (zebrafish) 1 1
MIRT026030 ZBTB24 zinc finger and BTB domain containing 24 1 1
MIRT026031 NR4A1 nuclear receptor subfamily 4 group A member 1 1 1
MIRT026032 ABT1 activator of basal transcription 1 1 1
MIRT026033 SPATA2 spermatogenesis associated 2 1 1
MIRT026034 NHLRC3 NHL repeat containing 3 1 1
MIRT026035 RPUSD2 RNA pseudouridylate synthase domain containing 2 1 1
MIRT026036 CEP120 centrosomal protein 120 1 1
MIRT026037 PHC3 polyhomeotic homolog 3 1 1
MIRT026038 ZBTB6 zinc finger and BTB domain containing 6 1 1
MIRT026039 C9orf41 carnosine N-methyltransferase 1 1 1
MIRT026040 PNP purine nucleoside phosphorylase 1 1
MIRT026041 COPS3 COP9 signalosome subunit 3 1 1
MIRT026042 NUP50 nucleoporin 50 1 1
MIRT026043 ZNF763 zinc finger protein 763 1 1
MIRT026044 FOXJ3 forkhead box J3 1 1
MIRT026045 BIN3 bridging integrator 3 1 1
MIRT026046 C12orf4 chromosome 12 open reading frame 4 1 1
MIRT026047 RAD9A RAD9 checkpoint clamp component A 1 1
MIRT026048 PCGF3 polycomb group ring finger 3 1 1
MIRT026049 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT026050 SLC10A7 solute carrier family 10 member 7 1 1
MIRT026051 LBR lamin B receptor 1 1
MIRT026052 BCL11A B-cell CLL/lymphoma 11A 1 1
MIRT026053 GLMN glomulin, FKBP associated protein 1 1
MIRT026054 STK40 serine/threonine kinase 40 1 1
MIRT026055 TMEM135 transmembrane protein 135 1 1
MIRT026056 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 3
MIRT026057 POLR2D RNA polymerase II subunit D 2 5
MIRT026058 LGR4 leucine rich repeat containing G protein-coupled receptor 4 1 1
MIRT026059 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 4
MIRT026060 ESPL1 extra spindle pole bodies like 1, separase 1 1
MIRT026061 RFX5 regulatory factor X5 1 1
MIRT026062 SYT9 synaptotagmin 9 1 1
MIRT026063 PEX13 peroxisomal biogenesis factor 13 1 1
MIRT026064 IGF1R insulin like growth factor 1 receptor 1 1
MIRT026065 SMCR7L mitochondrial elongation factor 1 1 4
MIRT026066 SLC30A6 solute carrier family 30 member 6 2 3
MIRT026067 RAB31 RAB31, member RAS oncogene family 1 1
MIRT026068 KPNA5 karyopherin subunit alpha 5 1 1
MIRT026069 SLC20A1 solute carrier family 20 member 1 1 1
MIRT026070 TIMM23 translocase of inner mitochondrial membrane 23 1 1
MIRT026071 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT026072 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 1 1
MIRT026073 CCNT2 cyclin T2 1 1
MIRT026074 CCND2 cyclin D2 1 1
MIRT026075 USP24 ubiquitin specific peptidase 24 1 1
MIRT026076 TRPC3 transient receptor potential cation channel subfamily C member 3 2 4
MIRT026077 SMC3 structural maintenance of chromosomes 3 1 1
MIRT026078 TMEM2 transmembrane protein 2 1 1
MIRT026079 RDH10 retinol dehydrogenase 10 1 1
MIRT026080 C11orf57 chromosome 11 open reading frame 57 2 5
MIRT026081 FAM127A retrotransposon Gag like 8C 2 4
MIRT026082 PRUNE2 prune homolog 2 2 3
MIRT026083 SPRYD4 SPRY domain containing 4 1 1
MIRT026084 TMEM161B transmembrane protein 161B 1 1
MIRT026085 CPEB3 cytoplasmic polyadenylation element binding protein 3 1 1
MIRT026086 FAM104A family with sequence similarity 104 member A 2 2
MIRT026087 RAB7L1 RAB29, member RAS oncogene family 1 1
MIRT026088 ITGAV integrin subunit alpha V 1 1
MIRT026089 CPD carboxypeptidase D 1 1
MIRT026090 ZNF354B zinc finger protein 354B 1 1
MIRT026091 TMEM194A nuclear envelope integral membrane protein 1 1 1
MIRT026092 EPHA7 EPH receptor A7 1 1
MIRT026093 KIAA1804 mitogen-activated protein kinase kinase kinase 21 1 1
MIRT026094 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT026095 TSPAN12 tetraspanin 12 1 1
MIRT026096 LIN28B lin-28 homolog B 1 1
MIRT026097 ARHGAP28 Rho GTPase activating protein 28 1 1
MIRT026098 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 1 1
MIRT026099 CCDC47 coiled-coil domain containing 47 1 1
MIRT026100 HAND1 heart and neural crest derivatives expressed 1 4 2
MIRT026101 LLGL1 LLGL1, scribble cell polarity complex component 1 1
MIRT048150 PGAM1 phosphoglycerate mutase 1 1 1
MIRT048151 PSMC3 proteasome 26S subunit, ATPase 3 1 1
MIRT048152 TMX2 thioredoxin related transmembrane protein 2 1 1
MIRT048153 KLHL7 kelch like family member 7 1 1
MIRT048154 RFC2 replication factor C subunit 2 1 1
MIRT048155 GLUL glutamate-ammonia ligase 1 1
MIRT048156 NRXN1 neurexin 1 1 1
MIRT048157 GSTK1 glutathione S-transferase kappa 1 1 1
MIRT048158 HIST2H4B histone cluster 2 H4 family member b 1 1
MIRT048159 SPEN spen family transcriptional repressor 1 1
MIRT048160 TAF15 TATA-box binding protein associated factor 15 1 1
MIRT048161 SAP18 Sin3A associated protein 18 1 1
MIRT048162 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 1 1
MIRT048163 MSL3 MSL complex subunit 3 1 1
MIRT048164 TSKU tsukushi, small leucine rich proteoglycan 1 1
MIRT048165 KMT2C lysine methyltransferase 2C 1 1
MIRT048166 LYRM2 LYR motif containing 2 1 1
MIRT048167 UBE2Z ubiquitin conjugating enzyme E2 Z 1 1
MIRT048168 C19orf55 proline and serine rich 3 1 1
MIRT048169 LRP2 LDL receptor related protein 2 1 1
MIRT048170 ND4L NADH dehydrogenase, subunit 4L (complex I) 1 1
MIRT048171 NKX6-1 NK6 homeobox 1 1 1
MIRT048172 BRMS1L breast cancer metastasis-suppressor 1 like 1 1
MIRT048173 RPS2 ribosomal protein S2 1 1
MIRT048174 RBMX RNA binding motif protein, X-linked 1 1
MIRT048175 ZFP64 ZFP64 zinc finger protein 1 1
MIRT048176 REEP2 receptor accessory protein 2 1 1
MIRT048177 MED13 mediator complex subunit 13 1 1
MIRT048178 MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 1 1
MIRT048179 TRAPPC9 trafficking protein particle complex 9 1 1
MIRT048180 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 1 1
MIRT048181 VDAC3 voltage dependent anion channel 3 1 1
MIRT048182 ZNF529 zinc finger protein 529 1 1
MIRT048183 EWSR1 EWS RNA binding protein 1 1 1
MIRT048184 ATP6V1B2 ATPase H+ transporting V1 subunit B2 1 1
MIRT048185 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 1 1
MIRT048186 APP amyloid beta precursor protein 1 1
MIRT048187 PROSER1 proline and serine rich 1 1 1
MIRT048188 HIST1H2BB histone cluster 1 H2B family member b 1 1
MIRT048189 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 1 1
MIRT048190 TUBA1B tubulin alpha 1b 1 1
MIRT048191 USP19 ubiquitin specific peptidase 19 1 1
MIRT048192 COX3 cytochrome c oxidase III 1 1
MIRT048193 PSMD8 proteasome 26S subunit, non-ATPase 8 1 1
MIRT048194 TRA2B transformer 2 beta homolog 1 1
MIRT048195 MRPL35 mitochondrial ribosomal protein L35 1 1
MIRT048196 KCTD1 potassium channel tetramerization domain containing 1 1 1
MIRT048197 UBE2C ubiquitin conjugating enzyme E2 C 1 1
MIRT048198 ZNF581 zinc finger protein 581 1 1
MIRT048199 CNOT11 CCR4-NOT transcription complex subunit 11 1 1
MIRT048200 POTEG POTE ankyrin domain family member G 1 1
MIRT048201 MTRF1L mitochondrial translational release factor 1 like 1 1
MIRT048202 SRP9 signal recognition particle 9 2 5
MIRT048203 BCORL1 BCL6 corepressor like 1 1 1
MIRT048204 NRBP1 nuclear receptor binding protein 1 1 1
MIRT048205 LRRC41 leucine rich repeat containing 41 1 1
MIRT048206 ATP6 ATP synthase F0 subunit 6 1 1
MIRT048207 FKTN fukutin 1 1
MIRT048208 RANBP9 RAN binding protein 9 1 1
MIRT048209 SYVN1 synoviolin 1 1 1
MIRT048210 NR2F6 nuclear receptor subfamily 2 group F member 6 1 1
MIRT048211 ATG16L1 autophagy related 16 like 1 1 1
MIRT048212 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 1 1
MIRT048213 ECHDC1 ethylmalonyl-CoA decarboxylase 1 1 1
MIRT048214 HAUS6 HAUS augmin like complex subunit 6 1 1
MIRT048215 CKAP2L cytoskeleton associated protein 2 like 1 1
MIRT048216 IFNGR1 interferon gamma receptor 1 1 1
MIRT048217 ANXA7 annexin A7 1 1
MIRT048218 ENAH ENAH, actin regulator 1 1
MIRT048219 FOXO1 forkhead box O1 9 3
MIRT048220 NDFIP1 Nedd4 family interacting protein 1 1 1
MIRT048221 LSM14A LSM14A, mRNA processing body assembly factor 1 1
MIRT048222 ATP1A1 ATPase Na+/K+ transporting subunit alpha 1 1 1
MIRT048223 SLC25A17 solute carrier family 25 member 17 1 1
MIRT048224 ZNF398 zinc finger protein 398 1 1
MIRT048225 RASSF7 Ras association domain family member 7 1 1
MIRT048226 SBF1 SET binding factor 1 1 1
MIRT048227 TP53RK TP53 regulating kinase 1 1
MIRT048228 MED12 mediator complex subunit 12 1 1
MIRT048229 FLNA filamin A 1 1
MIRT048230 CCNE2 cyclin E2 1 1
MIRT048231 CANX calnexin 1 1
MIRT048232 PRPF8 pre-mRNA processing factor 8 1 1
MIRT048233 FRS2 fibroblast growth factor receptor substrate 2 1 1
MIRT048234 KIF18B kinesin family member 18B 1 1
MIRT048235 U2AF2 U2 small nuclear RNA auxiliary factor 2 1 1
MIRT048236 SH3GL3 SH3 domain containing GRB2 like 3, endophilin A3 1 1
MIRT048237 VCP valosin containing protein 1 1
MIRT048238 ETV3 ETS variant 3 1 1
MIRT048239 BCS1L BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone 1 1
MIRT048240 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT048241 ZCCHC11 zinc finger CCHC-type containing 11 1 1
MIRT048242 RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 1 1
MIRT048243 HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 1 1
MIRT048244 ACTB actin beta 1 1
MIRT048245 UQCRC2 ubiquinol-cytochrome c reductase core protein II 1 1
MIRT048246 EIF2B4 eukaryotic translation initiation factor 2B subunit delta 1 1
MIRT048247 GMFB glia maturation factor beta 1 1
MIRT048248 PALLD palladin, cytoskeletal associated protein 1 1
MIRT048249 CASP3 caspase 3 1 1
MIRT048250 VCL vinculin 1 1
MIRT048251 IPO5 importin 5 1 1
MIRT048252 PATL1 PAT1 homolog 1, processing body mRNA decay factor 1 1
MIRT048253 NAP1L4 nucleosome assembly protein 1 like 4 1 1
MIRT048254 RUFY2 RUN and FYVE domain containing 2 2 1
MIRT048255 TUBB tubulin beta class I 1 1
MIRT048256 CCND1 cyclin D1 1 1
MIRT048257 GID8 GID complex subunit 8 homolog 1 1
MIRT048258 VDAC2 voltage dependent anion channel 2 1 1
MIRT048259 SLC6A8 solute carrier family 6 member 8 1 1
MIRT048260 FXR2 FMR1 autosomal homolog 2 1 1
MIRT048261 SCN11A sodium voltage-gated channel alpha subunit 11 1 1
MIRT048262 AHSA1 activator of HSP90 ATPase activity 1 1 1
MIRT048263 ATG9A autophagy related 9A 1 1
MIRT048264 NOTCH2 notch 2 1 1
MIRT048265 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT048266 ND4 NADH dehydrogenase, subunit 4 (complex I) 2 1
MIRT048267 OAT ornithine aminotransferase 1 1
MIRT048268 TRAP1 TNF receptor associated protein 1 1 1
MIRT048269 SKI SKI proto-oncogene 1 1
MIRT048270 GLTP glycolipid transfer protein 1 1
MIRT048271 EEF2 eukaryotic translation elongation factor 2 1 1
MIRT048272 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 1 1
MIRT048273 GRIK4 glutamate ionotropic receptor kainate type subunit 4 1 1
MIRT048274 PDE6D phosphodiesterase 6D 1 1
MIRT048275 MPP2 membrane palmitoylated protein 2 1 1
MIRT048276 SAR1B secretion associated Ras related GTPase 1B 2 3
MIRT048277 MAP4 microtubule associated protein 4 1 1
MIRT048278 RAB21 RAB21, member RAS oncogene family 1 1
MIRT048279 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 1 1
MIRT048280 OGFRL1 opioid growth factor receptor like 1 1 1
MIRT048281 GOT2 glutamic-oxaloacetic transaminase 2 1 1
MIRT048282 NRDE2 NRDE-2, necessary for RNA interference, domain containing 1 1
MIRT048283 SBNO1 strawberry notch homolog 1 1 1
MIRT053067 NTN4 netrin 4 2 1
MIRT054025 RDX radixin 5 5
MIRT056750 ARID5B AT-rich interaction domain 5B 2 2
MIRT057645 LCOR ligand dependent nuclear receptor corepressor 2 4
MIRT076226 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT083303 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT095769 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT187720 SUOX sulfite oxidase 2 2
MIRT191923 CALM1 calmodulin 1 2 2
MIRT205504 SP100 SP100 nuclear antigen 2 2
MIRT209857 ACVR2B activin A receptor type 2B 2 2
MIRT229841 YIPF6 Yip1 domain family member 6 2 2
MIRT230833 TBRG1 transforming growth factor beta regulator 1 2 2
MIRT235376 CALM3 calmodulin 3 2 2
MIRT251626 KCNJ2 potassium voltage-gated channel subfamily J member 2 2 2
MIRT252333 SALL3 spalt like transcription factor 3 2 2
MIRT255317 CDV3 CDV3 homolog 2 2
MIRT324734 ACER2 alkaline ceramidase 2 4 3
MIRT386075 ZNF609 zinc finger protein 609 2 2
MIRT402060 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437422 NFKBIA NFKB inhibitor alpha 4 2
MIRT437980 TYMS thymidylate synthetase 1 1
MIRT437981 NRP2 neuropilin 2 1 1
MIRT437982 LSP1 lymphocyte-specific protein 1 1 1
MIRT439104 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT447143 KIF27 kinesin family member 27 2 2
MIRT447559 C14orf37 chromosome 14 open reading frame 37 2 2
MIRT449961 FMNL3 formin like 3 2 2
MIRT465087 TSPAN3 tetraspanin 3 2 2
MIRT470426 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT472726 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473801 MAP3K2 mitogen-activated protein kinase kinase kinase 2 2 2
MIRT474507 KLHDC8B kelch domain containing 8B 2 2
MIRT474917 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT486549 DCTN4 dynactin subunit 4 2 2
MIRT492430 RGL2 ral guanine nucleotide dissociation stimulator like 2 2 2
MIRT493925 FAM127B retrotransposon Gag like 8A 2 4
MIRT500972 SPTSSA serine palmitoyltransferase small subunit A 2 2
MIRT501431 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT502410 GATA6 GATA binding protein 6 2 8
MIRT506368 NUP155 nucleoporin 155 2 6
MIRT507497 E2F7 E2F transcription factor 7 2 6
MIRT520041 YOD1 YOD1 deubiquitinase 2 6
MIRT522366 NAP1L1 nucleosome assembly protein 1 like 1 2 4
MIRT531281 SLC7A7 solute carrier family 7 member 7 2 2
MIRT543674 FAM135A family with sequence similarity 135 member A 2 2
MIRT545199 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT546336 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT546452 SLC9A7 solute carrier family 9 member A7 2 2
MIRT546787 RCC2 regulator of chromosome condensation 2 2 4
MIRT547253 NXPE3 neurexophilin and PC-esterase domain family member 3 2 2
MIRT547454 MBD4 methyl-CpG binding domain 4, DNA glycosylase 2 2
MIRT547581 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT547902 HOXA9 homeobox A9 2 4
MIRT549503 ABHD2 abhydrolase domain containing 2 2 2
MIRT549583 ZNF850 zinc finger protein 850 2 2
MIRT551888 MMS22L MMS22 like, DNA repair protein 2 2
MIRT552125 MED10 mediator complex subunit 10 2 2
MIRT554188 SLC35E2B solute carrier family 35 member E2B 2 2
MIRT555552 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT556285 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT556980 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT559183 BRAP BRCA1 associated protein 2 2
MIRT561215 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT562352 EXOC8 exocyst complex component 8 2 2
MIRT565603 SLC35G1 solute carrier family 35 member G1 2 2
MIRT575599 Gnl1 guanine nucleotide binding protein-like 1 2 3
MIRT610363 GNL1 G protein nucleolar 1 (putative) 2 3
MIRT617860 FMO4 flavin containing monooxygenase 4 2 2
MIRT698193 TMEM66 store-operated calcium entry associated regulatory factor 1 1
MIRT704411 CTPS1 CTP synthase 1 2 2
MIRT732864 NARS asparaginyl-tRNA synthetase 3 0
MIRT732867 AJAP1 adherens junctions associated protein 1 3 0
MIRT732868 COL24A1 collagen type XXIV alpha 1 chain 3 0
MIRT735738 RASSF4 Ras association domain family member 4 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-196a Curcumin NULL 969516 Microarray BxPC-3 human pancreatic carcinoma cell line 18347134 2008 down-regulated
miR-196a Diethylstilbestrol approved 448537 Microarray mammosphere-derived epithelial cells (MDEC) 19549897 2009 down-regulated
miR-196a Polylysine NULL 162282 Quantitative real-time PCR 293T(FLAG AGO2) cells 20529860 2010 down-regulated
miR-196a Trypaflavine NULL NULL Quantitative real-time PCR 293T(FLAG AGO2) cells 20529860 2010 down-regulated
miR-196a Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-196a 1,2,6-Tri-O-galloyl-beta-D-glucopyranose NULL NULL Microarray HepG2 hepatocarcinoma cells. 22506400 2011 down-regulated
miR-196a Curcumin NULL 969516 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-196a Narangin NULL 442428 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-196a Proanthocyanin NULL 108065 Microarray apoE−/− mice 22253797 2012 down-regulated
miR-196a (S)-3,5-dihydroxyphenylglycine (DHPG) NULL 443586 Quantitative real-time PCR mouse brain 22309833 2012 up-regulated
miR-196a (S)-3,5-dihydroxyphenylglycine (DHPG) NULL 443586 Quantitative real-time PCR mouse brain 22309833 2012 up-regulated
miR-196a 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
miR-196a (S)-3,5-dihydroxyphenylglycine (DHPG) NULL 443586 Quantitative real-time PCR mouse brain 22309833 2012 up-regulated
miR-196a Galactose NULL 6036 Quantitative real-time PCR lens 22736950 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-196a-5p (e)-2-methyl-1-[2-(2-methyl-1h-indol-3-yl)indolin-1-yl]but-2-en-1-one 5388204 NSC633484 resistant
hsa-miR-196a-5p (E)-3-[2-(4-methoxyphenyl)imidazo[1,2-a]pyridin-3-yl]-1-(3,4,5-trimethoxyphenyl)prop-2-en-1-one 54613570 NSC750335 sensitive
hsa-miR-196a-5p 1-[4-(5,6-diphenyl-1,2,4-triazin-3-yl)piperazin-1-yl]-2-[4-(4-methoxyphenyl)piperazin-1-yl]ethanone 54612996 NSC749161 sensitive
hsa-miR-196a-5p 2-[(e)-[6-(4-chloro-3-nitrophenyl)-2,3-dihydroimidazo[2,1-b][1,3]thiazol-5-yl]methylideneamino]guanidine;hydrochloride 16099315 NSC728901 resistant
hsa-miR-196a-5p 2-amino-6-(benzylamino)-4-(2-chlorophenyl)pyridine-3,5-dicarbonitrile 24205132 NSC734396 resistant
hsa-miR-196a-5p 7-[(3,4-dimethoxyphenyl)methyl]-6-phenyl-4,5-dihydropyrrolo[3,4-g][1,2]benzoxazole 60148271 NSC754077 sensitive
hsa-miR-196a-5p Bisarylpurine 45028308 NSC742146 resistant
hsa-miR-196a-5p Camptothecin derivative 97226 NSC107124 sensitive
hsa-miR-196a-5p Dimethylarsinothious acid, 2,4-pyrimidinediyl ester 294741 NSC163664 resistant
hsa-miR-196a-5p Ethyl 5-(2,4-dichlorobenzoyl)oxy-4-oxo-1,3-diphenyl-2-thioxo-thieno[2,3-d]pyrimidine-6-carboxylate 383097 NSC671141 resistant
hsa-miR-196a-5p Gw620972x 766949 NSC756282 sensitive
hsa-miR-196a-5p Methyl 11h-pyrido[2,3-a]carbazole-5-carboxylate 13776879 NSC740203 sensitive
hsa-miR-196a-5p Methyl 6-[2-(diethylamino)ethoxy]-7-[(E)-3-(4-methoxyphenyl)prop-2-enoyl]-3-methyl-1-benzofuran-2-carboxylate;hydrochloride 24204523 NSC732112 resistant
hsa-miR-196a-5p N'-[2-(1,3-benzoxazol-2-ylamino)-6-methylpyrimidin-4-yl]-2-hydroxybenzohydrazide 24205702 NSC736401 resistant
hsa-miR-196a-5p N-(1,3-benzothiazol-2-yl)-2-[4-[(Z)-(3-oxo-1-benzofuran-2-ylidene)methyl]phenoxy]acetamide 45028625 NSC743506 resistant
hsa-miR-196a-5p N,n'-bis[(z)-(2-hydroxyphenyl)methylideneamino]decanediamide 135408549 NSC49488 resistant
hsa-miR-196a-5p NSC617562 NSC617562 resistant
hsa-miR-196a-5p NSC756998 NSC756998 sensitive
hsa-miR-196a-5p Tellurium, trichloro[1,2-hexanedioato(2-)-o,o']-, ammonium 498945 NSC641009 resistant
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3, 2008, OVCAR10, OVCAR3, HeLa, MCF7, MDA-MB-468)
hsa-miR-196a-5p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Sorafenib 216239 NSC747971 approved resistant High Hepatocellular Carcinoma cell line (HepG2, Hep-394, Hep-SWX, Huh-7)
hsa-miR-196a-5p Imatinib 5291 NSC743414 approved resistant High Myelogenous Leukemia cell line (MYL)
hsa-miR-196a-5p 10-Hydroxycamptothecin 97226 NSC107124 sensitive High Gastric Cancer cell line (BGC823, SGC-7901, MGC-803, HGC-27, NCI-N87, AGS)
hsa-miR-196a-5p Tamoxifen 2733525 NSC180973 approved sensitive High Breast Cancer cell line (MCF-7, LY2)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-196a-5p Fulvestrant 17756771 NSC719276 approved resistant Low Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Tamoxifen 2733525 NSC180973 approved resistant Low Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Doxorubicin 31703 NSC123127 approved resistant High Hepatocellular Carcinoma cell line (HepG2)
hsa-miR-196a-5p Docetaxel 148124 NSC628503 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (RKO)
hsa-miR-196a-5p Docetaxel 148124 NSC628503 approved resistant Low Breast Cancer tissue and cell line (MCF-7)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant Low Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant Low Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-196a-5p Tamoxifen 2733525 NSC180973 approved sensitive Low Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-196a-5p Doxorubicin 31703 NSC123127 approved sensitive High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-196a-5p Tamoxifen 2733525 NSC180973 approved sensitive Low Breast Cancer cell line (TAMR1, TAMR4, TAMR8)
hsa-miR-196a-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-196a-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-196a-5p Cytoxan + Doxorubicin + Fluorouracil resistant High Breast Cancer tissue
hsa-miR-196a-5p Cytoxan + Epirubicin + Fluorouracil resistant High Breast Cancer tissue
hsa-miR-196a-5p Cytoxan + Pirarubicin + Fluorouracil resistant High Breast Cancer tissue
hsa-miR-196a-5p Doxorubicin + Taxol resistant High Breast Cancer tissue
hsa-miR-196a-5p Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-196a-5p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (PC-9)
hsa-miR-196a-5p Yuanhuadine 6440572 resistant High Non-Small Cell Lung Cancer cell line (PC-9)
hsa-miR-196a-5p Paclitaxel 36314 NSC125973 approved sensitive Low Prostate Cancer cell line (DU-145R)
hsa-miR-196a-5p Paclitaxel + Cisplatin sensitive Low Esophageal Squamous Cell Carcinoma tissue
hsa-miR-196a-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (WM266) (2uM)
hsa-miR-196a-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (WM266) (1uM)
hsa-miR-196a-5p Trametinib 11707110 NSC758246 approved sensitive High Melanoma cell line (WM266) (2uM)
hsa-miR-196a-5p Trametinib 11707110 NSC758246 approved sensitive High Melanoma cell line (WM266) (1uM)
hsa-miR-196a-5p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Paclitaxel 36314 NSC125973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-196a-5p Trastuzumab resistant High Breast Cancer cell line (MDA‐MB‐231, SKBR3, HEK‐293T)
hsa-miR-196a-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant High Epithelial Ovarian Cancer cell line (SKOV3)
hsa-miR-196a-5p Temozolomide 5394 NSC362856 approved resistant cell line (U251)
hsa-miR-196a-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-196a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-196a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (total RNA)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-196a-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-196a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM17)
hsa-miR-196a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM16)
hsa-miR-196a-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (BAS)
hsa-miR-196a-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (BAS)
hsa-miR-196a-5p Tamoxifen 2733525 NSC180973 approved resistant cell line (LCC2)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-196a-5p Testosterone+Exemestane sensitive cell line (MCF-7)
hsa-miR-196a-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-196a-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (RPMI2650)
hsa-miR-196a-5p Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-196a-5p Tamoxifen 2733525 NSC180973 approved sensitive cell line (TamR8)
hsa-miR-196a-5p Tamoxifen 2733525 NSC180973 approved sensitive cell line (TamR1)
hsa-miR-196a-5p Oxaliplatin 6857599 NSC266046 approved resistant cell line (IGROV-1)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-196a-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (PC3PR70)
hsa-miR-196a-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (PC3PR200)
hsa-miR-196a-5p Neoadjuvant chemotherapy resistant tissue (breast cancer)
hsa-miR-196a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR3)
hsa-miR-196a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)
hsa-miR-196a-5p Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (OVCAR3)
hsa-miR-196a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)

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