pre-miRNA Information
pre-miRNA mmu-mir-470   
Genomic Coordinates chrX: 66813951 - 66814025
Synonyms Mirn470, mmu-mir-470, Mir470
Description Mus musculus miR-470 stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure

Mature miRNA Information
Mature miRNA mmu-miR-470-5p
Sequence 9| UUCUUGGACUGGCACUGGUGAGU |31
Evidence Experimental
Experiments Cloned
Putative Targets

Gene Information
Gene Symbol Ass1   
Synonyms AA408052, ASS, Ass-1, fold
Description argininosuccinate synthetase 1
Transcript NM_007494   
Expression
Putative miRNA Targets on Ass1
3'UTR of Ass1
(miRNA target sites are highlighted)
>Ass1|NM_007494|3'UTR
   1 ACCCTGACAAAGAGGAGCGGGCCTCCCCACTCTGCAGCTCTCCCAGGCTTCAGCATTAATTGTTGTGATAAATTTGTAAT
  81 TGTAGCTTGTTCTCCACCACCTGACTGGGGCTGCTGTGTCCCCCCCCGCCCCCCCACAGCCTTTGTTCCCTGGTCCCCTA
 161 TAGCCTACAAAAGTGGTCATCCAAGGGAAGGGAGGGTGGCGGGCAGCTGCAGAAAGCATAAAATGACAATTAAAAGAAGT
 241 TACATTAGTCTTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugaGUGGUCA-CGGUCAGGUUCUu 5'
             ||  ||| |:|| ||||||: 
Target 5' ctaCAAAAGTGGTCA-TCCAAGGg 3'
165 - 187 143.00 -17.60
2
miRNA  3' ugAGUGGUCACG-GUC---AGGUUCUu 5'
            || ||| | : |||   ||| ||: 
Target 5' ccTCCCCACTCTGCAGCTCTCCCAGGc 3'
22 - 48 109.00 -11.00
3
miRNA  3' ugAGUGGUC---ACGGU-CAGGuucuu 5'
            | ||::|   |||:: ||||     
Target 5' ccTGACTGGGGCTGCTGTGTCCccccc 3'
100 - 126 81.00 -10.73
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions (Male Ames dwarf mice)
Disease 0.0
Location of target site 3'UTR
Tools used in this research miRBase Target Database
Original Description (Extracted from the article) ... "For example ...

- Bates DJ; Li N; Liang R; Sarojini H; An J; et al., 2010, Aging cell.

Article - Bates DJ; Li N; Liang R; Sarojini H; An J; et al.
- Aging cell, 2010
The Ames dwarf mouse is well known for its remarkable propensity to delay the onset of aging. Although significant advances have been made demonstrating that this aging phenotype results primarily from an endocrine imbalance, the post-transcriptional regulation of gene expression and its impact on longevity remains to be explored. Towards this end, we present the first comprehensive study by microRNA (miRNA) microarray screening to identify dwarf-specific lead miRNAs, and investigate their roles as pivotal molecular regulators directing the long-lived phenotype. Mapping the signature miRNAs to the inversely expressed putative target genes, followed by in situ immunohistochemical staining and in vitro correlation assays, reveals that dwarf mice post-transcriptionally regulate key proteins of intermediate metabolism, most importantly the biosynthetic pathway involving ornithine decarboxylase and spermidine synthase. Functional assays using 3'-untranslated region reporter constructs in co-transfection experiments confirm that miRNA-27a indeed suppresses the expression of both of these proteins, marking them as probable targets of this miRNA in vivo. Moreover, the putative repressed action of this miRNA on ornithine decarboxylase is identified in dwarf mouse liver as early as 2 months of age. Taken together, our results show that among the altered aspects of intermediate metabolism detected in the dwarf mouse liver--glutathione metabolism, the urea cycle and polyamine biosynthesis--miRNA-27a is a key post-transcriptional control. Furthermore, compared to its normal siblings, the dwarf mouse exhibits a head start in regulating these pathways to control their normality, which may ultimately contribute to its extended health-span and longevity.
LinkOut: [PMID: 19878148]
26 mmu-miR-470-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT001002 Nanog Nanog homeobox 4 1
MIRT004344 Pou5f1 POU domain, class 5, transcription factor 1 4 1
MIRT005701 Ass1 argininosuccinate synthetase 1 2 1
MIRT579600 4930563E22Rik RIKEN cDNA 4930563E22 gene 1 3
MIRT579658 1810030O07Rik RIKEN cDNA 1810030O07 gene 1 2
MIRT587091 Gldn gliomedin 1 1
MIRT591592 Zbtb44 zinc finger and BTB domain containing 44 1 1
MIRT594490 Dcp2 decapping mRNA 2 1 1
MIRT596386 Wipf2 WAS/WASL interacting protein family, member 2 1 1
MIRT596756 Utp23 UTP23 small subunit processome component 1 1
MIRT597051 Terf2ip telomeric repeat binding factor 2, interacting protein 1 1
MIRT598179 Mrpl19 mitochondrial ribosomal protein L19 1 1
MIRT598583 Intu inturned planar cell polarity protein 1 1
MIRT599191 Ddx19b DEAD (Asp-Glu-Ala-Asp) box polypeptide 19b 1 1
MIRT599360 Colec12 collectin sub-family member 12 1 1
MIRT599386 Cln8 ceroid-lipofuscinosis, neuronal 8 1 1
MIRT599752 Amy2a4 amylase 2a4 1 1
MIRT599756 Amy2a3 amylase 2a3 1 1
MIRT599760 Amy2a2 amylase 2a2 1 1
MIRT599869 Acnat1 acyl-coenzyme A amino acid N-acyltransferase 1 1 1
MIRT600012 2900026A02Rik RIKEN cDNA 2900026A02 gene 1 1
MIRT601650 Siglece sialic acid binding Ig-like lectin E 1 1
MIRT602197 Hmmr hyaluronan mediated motility receptor (RHAMM) 1 1
MIRT605471 Slc7a14 solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 1 1
MIRT605570 Oxsm 3-oxoacyl-ACP synthase, mitochondrial 1 1
MIRT732694 BDNF brain derived neurotrophic factor 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-470 (S)-3,5-dihydroxyphenylglycine (DHPG) NULL 443586 Quantitative real-time PCR mouse brain 22309833 2012 up-regulated
miR-470 (S)-3,5-dihydroxyphenylglycine (DHPG) NULL 443586 Quantitative real-time PCR mouse brain 22309833 2012 up-regulated
miR-470 (S)-3,5-dihydroxyphenylglycine (DHPG) NULL 443586 Quantitative real-time PCR mouse brain 22309833 2012 up-regulated
miR-470 Reversine NULL 210332 Microarray C2C12 myoblast cells 24513286 2014 up-regulated

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