miRTarBase - #MIRT020085


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pre-miRNA Information
pre-miRNA hsa-mir-361   
Genomic Coordinates chrX: 85903636 - 85903707
Synonyms MIRN361, hsa-mir-361, MIR361
Description Homo sapiens miR-361 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-361-5p
Sequence 6| UUAUCAGAAUCUCCAGGGGUAC |27
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 9 X - 85903694 29233923 MiREDiBase
A-to-I 15 X - 85903688 29976955, 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1201941835 9 dbSNP
rs1341659793 19 dbSNP
rs1430235395 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol WDR36   
Synonyms GLC1G, TA-WDRP, TAWDRP, UTP21
Description WD repeat domain 36
Transcript NM_139281   
Expression
Putative miRNA Targets on WDR36
3'UTR of WDR36
(miRNA target sites are highlighted)		 
>WDR36|NM_139281|3'UTR
   1 AAATAAATTTGTGACTAAACAAAGACTTTCATATTAAATGGGTTCAATTGAACTCATTTCTTATTTTCCAAGTGTCAATG
  81 TGAAAAGAAAATAAATGCTAGCACTACTGACTAGTCAGTATATCTCCACTTTAAATGCTAAATACTTTCTTGAAATAAAA
 161 TCGCACCTCCCGGCCAGGCATGATGGATAATGCCTGTAATTCCAGCACTTTCAGAGGCCAAAGCGGGAGGATTGCTTGAA
 241 GCCAGGAATTTGAGCCCAGCCTGGGCAACATAGCAAGCAAGATCCCATCTCTACAAAAAGTTAAAAAAATAAATTACACC
 321 TGCCTTTTGTTTTGAAGACTTAAAGAATCTGCTCAAATGATTTATTTTCTGAGTCTCTTCACATTAACTTTTATATGATT
 401 TTTAAAAAATTATTACCTGCTTATATTTTTTGAGTATCTGTTTCATATAAAGAGATGCTGCATGTTCACTGTGAAGTATT
 481 GCTGAATTAAATTGAAAATGTCAGATAAAACTGATACATGATGTAGTTATAAAAATGCTGTTATGAAGAAAAAAGGAATG
 561 CTTTTTTCCTCGGTGGCCTTTGATAAAAATATGAATGATTGACTCTCAGAGTTGGAGGATAAACTAATCATCTTCTAGCA
 641 CAGCCCTGTTGTGTTGCAGGAGAGGAATCAGGCTAAAGTCTGCTGGTATTTCAGTGACAGATTAAAACTTTCTAACAGTG
 721 GCCTAGTGCTTTCTCCATTGTAATGTACTGAAAGGAAGTTGTTCATGGATCAGAAATGTGGGAGGCCCTTCCTTGCCCAA
 801 GGCAAGTCGCTGTAGATGGTTAAACTGATACCAAGGATAGGTAAGGGAAATTCCAAATTCCATTGGAAGATGGCCTTTTA
 881 CTGACACTGCAGACATGTAGATAACAATAGTTTAATGTCCTCTGAAAAGGTAAAAATTCCATAAATCCTTGCAAACAATT
 961 TTTAGCAATATTGTTTATTGCTACCACAGCCAAGAATGGGTATTTCAAAGCCAGGGTTTTTTTTATTTTGTTTTGTTTTG
1041 TTTTTTTTTTTTTTTTTTTGGCTACACTTTTTTGGGGGGGACCTTTTAATTTGGGAAGAAAATGCTGAGTATACTTTTCT
1121 TTCACAACCATTGCAAACCCAGGTAGCCCTGGAGTTTTCTTTTTTTCTCATCATCATTGTTTTGTTTTTTTTATGGTTCA
1201 AGACTTTTGCAATACATGAATTAAAAATAAGCAGTTCTTTAAAGCATAGCGCTCTAAAAACTATTCTTAGTTTATACCCT
1281 CAAAAGTTGGGTCTTTCATGAAACACAGTGGTTTGAATATGAACACCAGTAGCATTCTCGTTCGTTGTTAGGGTAAGAGA
1361 GTTTTGTAGAATGATCTCCAAAAGAAGCAGTCCTCAAAAGGCATTTACCAGTGATATCTTTTAATATTCATGTTTTTATT
1441 TAATGATGTAAGATAGAATTAATAAACTACTAAGGAAATAAGCCAATGTGGTTATTGTACTCAATTTCGTTTTTCTTTTA
1521 GAAATGTGTATTGACTTATTAAAGCCACTGACAGAAATGTTAATCATGACTTAAGTTCTAATTTAAAAAACTATTTTCCT
1601 CTTTCCTAAATACTATATTCTAAATTGGAATATGGCAAAATCCCAATATATAATTCTATACCTAGTAAAGATTGTAAATA
1681 ACTAAAACAAAATGATAAGAGCTGTGAACTGAAATTGTATTGCTTACAGAAATCATGAACCGAATTTTCTTCTCTTTTTA
1761 AAGTGAGCATAAAGACTTAAGTGTATTGTTACCAGAGATATATTTAGATAGAATACATCATTTTGGCAGGTAATCTTCTA
1841 GAACCTTTCATGTACTGTTTCCATCAAGGGAGGGAAAGAAATAGAAAATATAATTTTATCTATATTTTCCTTAAAATATA
1921 TCAATCTGTGCACACTCTTTCAGTTTTTTAATTACTCATGTAATATATGACTACATTTTGCTTGTGTGCTTTTTGAAAAC
2001 CATCTTCAGTCCCAATATCCTCTGTAGAAGTAATAGTTTTAACTCTCCTAGATCTTCTTTTAGAGTGTTTTTATGAGTGT
2081 TTAATGTAGGAATGTGTATATATTATCTACAGCCACAGGAAATGTATAGTTACGATTTTTACATACGTGTATGTATATTA
2161 TTGTACAACTTGCTATTTCTACTTGGGAGTTTTTTATTTTGGTACATTCACATTTACCTAATCTCTTGTGCACTGTCCAA
2241 CAGTACTTTGCCTATAATAGACACTTAAGGAAGTTTTCCTTCTTTTTATTCCTTTATAATTACAAACAATGCTGAAAGGA
2321 ACATCATCCTACATGAGCCCTTTTTGTACATATAAGGCTCTCTCTGTGGTATATGCTTAGGATTTGAATTTCAGGCCAGA
2401 GTATAACCATTTTTAATTTGAAGAGATACTTCCATTTGGGTTCCAGAATGGCTGTATCAAGTTACAGTTCCCCTGAGCAA
2481 GATATGAGCATCTGCTTCCCCATGTAATTAATGACACTTGCTATTGGATTTTTGTAATTTAATTACTCTGAAAAAATTAT
2561 TTTGGTTTTAAATCAGAAATTTCTCACTAGTGAAGATGGACATATTTTTGTATGTTTATTTTAGAACATATAAACATTTG
2641 TTAATTTTCTTTTTCCTCTCATTTTTCTATTGAATGATTTGTCCTTTTATCTCATGGATTTGTTAGGAGTTCTCTTGTAT
2721 TTTCTGTATTTTATGTCTGTTGCCAATGTTTTCTCCTACTTAGCCATTTGGCTTTAATTTTACATGGTGTCTGTTTAAAT
2801 AAATGTTTTATATTTGTATACAATCAAATTGATTAATTTTCATGACTTATTTCAGGATATAAAGCAAATTATTTTCTAAG
2881 ACATTTACAGTGTATGTTTTCCTATGTTTACATGTGCTCATTTCACGTCATGTATTTTCCTCTACGACATGTTTCTGTGT
2961 GAGTAGTTAACATGTAGATCTTTAGAATTGATTTTTCTGAAGAGTGAAACAGCGCTGCTTCCAATATCTGTTCAAAATTC
3041 ATTTATTGAAAAGTCCACTCATATGTCTGATTTGAAATGCTGTTTCATTATGTGTTAAATTCTTTCACTGAGCTCTTCCA
3121 TATTCCTAGTAAATGATGCATTACTTTGGTATGTTCTCAGATTTGGGTAAAGCCTTCCTCATGTTCTATAAAAATTGGTT
3201 AACTGCTGGTGAGCACATCTCTTGAAGTTTTGATATGGGTTGCACAACATTTATAGGACTGATTTGGAGAGACCGACAAT
3281 ACCGAGTGCAGTCCTCCCTTGGTATCTAGTTCCAGGACCCCTGTGGATACCAAAATCCAAGCAATGCCCTGCAGATCATG
3361 GGACCTATGCATATGAAAAGTCGGTCCTTGTATTTGAGGGTTTTGCATCCCTCAAATACCATATGTTTTATTTGTGTTTG
3441 GTTGAAAAAAGTTTGCATATAAGTGAAACTTAGCATTTCAAACCTGTGTTGTTCAAAGATCATTTGTATTTCTCTTCAAG
3521 AACAATGAATGTCTTCATTAAATCATCTTTTGTGGGAGAGCTTTTGGTTTCATAGATTTTCATATATATATATGATATAA
3601 TAAACACTTTTTGACATTCAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' caUGGGGACCUCUAAGACUAUu 5'
            |:|:|| || :||:||||| 
Target 5' acATCTCTTGAAGTTTTGATAt 3'
 3215 - 3236 156.00 -13.60
2 
miRNA  3' cauGGGGACCUCUAAGACUAUu 5'
             ||:| | :|  |:||||| 
Target 5' tttCCTCGGTGGCCTTTGATAa 3'
 565 - 586 139.00 -14.50
3 
miRNA  3' cauGGGGACCUCUA-AGACUAuu 5'
             || ||  | || ||||||  
Target 5' agtCCACT-CATATGTCTGATtt 3'
 3052 - 3073 130.00 -9.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
350341 121 ClinVar
350359 1036 ClinVar
350361 1045 ClinVar
350363 1060 ClinVar
350364 1074 ClinVar
350385 2279 ClinVar
350391 2643 ClinVar
350407 3595 ClinVar
COSN30527153 55 COSMIC
COSN30121442 163 COSMIC
COSN27893125 167 COSMIC
COSN31962445 809 COSMIC
COSN20091229 1026 COSMIC
COSN24515030 1036 COSMIC
COSN20101609 1045 COSMIC
COSN19323807 1046 COSMIC
COSN7856030 1048 COSMIC
COSN17397812 1051 COSMIC
COSN20626473 1135 COSMIC
COSN17182724 1139 COSMIC
COSN6582936 1186 COSMIC
COSN16295298 1251 COSMIC
COSN10041163 1389 COSMIC
COSN24151662 1504 COSMIC
COSN9398287 1695 COSMIC
COSN5157579 1880 COSMIC
COSN16895551 2268 COSMIC
COSN25007968 2800 COSMIC
COSN16043905 2946 COSMIC
COSN26885418 3058 COSMIC
COSN31538696 3384 COSMIC
COSN31571141 3513 COSMIC
COSN31523941 3519 COSMIC
COSN31486167 3572 COSMIC
rs1043828 1428 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs747493438 2 dbSNP
rs1376042678 3 dbSNP
rs771432939 6 dbSNP
rs776976101 9 dbSNP
rs759942532 10 dbSNP
rs775167138 12 dbSNP
rs947128644 14 dbSNP
rs145531392 17 dbSNP
rs764503121 21 dbSNP
rs1428272178 27 dbSNP
rs752059193 27 dbSNP
rs1344077127 28 dbSNP
rs1263577845 31 dbSNP
rs540767551 35 dbSNP
rs1196110979 41 dbSNP
rs763598789 44 dbSNP
rs11952807 46 dbSNP
rs772320996 47 dbSNP
rs768932838 48 dbSNP
rs1420732320 54 dbSNP
rs1172796118 59 dbSNP
rs186924041 61 dbSNP
rs74848964 73 dbSNP
rs878883431 79 dbSNP
rs139818247 84 dbSNP
rs114583874 94 dbSNP
rs1046859319 103 dbSNP
rs192487360 119 dbSNP
rs1307833909 121 dbSNP
rs79289431 121 dbSNP
rs1005614461 122 dbSNP
rs1363924976 123 dbSNP
rs1315326455 127 dbSNP
rs771145952 134 dbSNP
rs1306613722 135 dbSNP
rs1403303843 136 dbSNP
rs1335293347 138 dbSNP
rs1347736253 139 dbSNP
rs1018847526 143 dbSNP
rs1024175920 155 dbSNP
rs901750087 161 dbSNP
rs996028320 164 dbSNP
rs185097062 172 dbSNP
rs956918073 173 dbSNP
rs760714532 181 dbSNP
rs1446491378 186 dbSNP
rs1343057370 192 dbSNP
rs1216438364 202 dbSNP
rs952109110 203 dbSNP
rs984898096 204 dbSNP
rs1181192863 209 dbSNP
rs1015418995 211 dbSNP
rs915398578 225 dbSNP
rs968645095 226 dbSNP
rs766383050 231 dbSNP
rs2112542 246 dbSNP
rs1247765327 251 dbSNP
rs981592229 253 dbSNP
rs1249433658 258 dbSNP
rs928893317 264 dbSNP
rs910997426 269 dbSNP
rs958961279 273 dbSNP
rs375991785 279 dbSNP
rs1428178382 282 dbSNP
rs141199096 283 dbSNP
rs759195620 284 dbSNP
rs1245774131 285 dbSNP
rs1164430666 294 dbSNP
rs1426853151 299 dbSNP
rs1186842039 303 dbSNP
rs922291513 303 dbSNP
rs1476812507 317 dbSNP
rs77988516 318 dbSNP
rs1252516655 320 dbSNP
rs1175442462 321 dbSNP
rs946335504 325 dbSNP
rs1046997913 326 dbSNP
rs1224248481 330 dbSNP
rs878969650 337 dbSNP
rs17625012 339 dbSNP
rs1264507290 340 dbSNP
rs941223426 342 dbSNP
rs2112543 346 dbSNP
rs1044911642 347 dbSNP
rs905234603 357 dbSNP
rs529466006 361 dbSNP
rs1350238331 387 dbSNP
rs1034989545 390 dbSNP
rs1406326956 394 dbSNP
rs371755412 396 dbSNP
rs569458537 398 dbSNP
rs935188895 400 dbSNP
rs540166624 405 dbSNP
rs2032835 407 dbSNP
rs566884664 414 dbSNP
rs1365645813 417 dbSNP
rs369641433 424 dbSNP
rs1472263768 426 dbSNP
rs1429915302 431 dbSNP
rs1201243248 435 dbSNP
rs1489805145 437 dbSNP
rs968236155 438 dbSNP
rs1205401756 441 dbSNP
rs1486550908 445 dbSNP
rs886059767 451 dbSNP
rs887825034 461 dbSNP
rs1006625449 462 dbSNP
rs964112690 464 dbSNP
rs1015037315 477 dbSNP
rs976486979 480 dbSNP
rs1329742314 481 dbSNP
rs534170126 485 dbSNP
rs1358294568 499 dbSNP
rs568614520 501 dbSNP
rs188780911 503 dbSNP
rs1387230680 504 dbSNP
rs574156242 512 dbSNP
rs1449560674 516 dbSNP
rs1190071936 523 dbSNP
rs1456791490 528 dbSNP
rs1035873424 531 dbSNP
rs958826187 540 dbSNP
rs775901281 544 dbSNP
rs914801137 545 dbSNP
rs535650957 552 dbSNP
rs979489346 554 dbSNP
rs941287931 556 dbSNP
rs923608205 572 dbSNP
rs1461392351 573 dbSNP
rs1206166615 584 dbSNP
rs935097507 593 dbSNP
rs1370736533 596 dbSNP
rs557154983 600 dbSNP
rs535644308 603 dbSNP
rs931815438 610 dbSNP
rs1228623798 612 dbSNP
rs1328365419 615 dbSNP
rs1295707838 616 dbSNP
rs905037434 618 dbSNP
rs369088194 619 dbSNP
rs892469838 628 dbSNP
rs1050397746 636 dbSNP
rs546128711 637 dbSNP
rs139138539 643 dbSNP
rs1401233504 646 dbSNP
rs1009605936 653 dbSNP
rs1463341913 658 dbSNP
rs1321453857 666 dbSNP
rs1022303496 668 dbSNP
rs1187568737 671 dbSNP
rs1444681172 675 dbSNP
rs1244496729 702 dbSNP
rs1388106761 710 dbSNP
rs904065057 713 dbSNP
rs1278556041 722 dbSNP
rs193032017 724 dbSNP
rs966268555 727 dbSNP
rs1228012566 734 dbSNP
rs1342216660 738 dbSNP
rs1006242736 739 dbSNP
rs1036787371 746 dbSNP
rs1317338871 749 dbSNP
rs775131769 754 dbSNP
rs976455892 759 dbSNP
rs1029398994 762 dbSNP
rs1329476618 775 dbSNP
rs897800121 781 dbSNP
rs1411406379 789 dbSNP
rs1002965887 793 dbSNP
rs1245396355 797 dbSNP
rs1283417877 803 dbSNP
rs1424964765 809 dbSNP
rs866800435 810 dbSNP
rs1237372834 814 dbSNP
rs1472192321 814 dbSNP
rs958899287 819 dbSNP
rs982371616 820 dbSNP
rs909565880 826 dbSNP
rs1013489689 833 dbSNP
rs1210303485 841 dbSNP
rs1021902831 845 dbSNP
rs1294230795 848 dbSNP
rs371775054 855 dbSNP
rs114769038 858 dbSNP
rs926430457 859 dbSNP
rs1030634856 864 dbSNP
rs1056554895 866 dbSNP
rs956337245 870 dbSNP
rs886059768 872 dbSNP
rs1306183759 873 dbSNP
rs1405344650 876 dbSNP
rs1424943149 877 dbSNP
rs1187455844 880 dbSNP
rs1367002456 881 dbSNP
rs755624798 884 dbSNP
rs1367148125 891 dbSNP
rs1404211372 892 dbSNP
rs1408145509 896 dbSNP
rs1044095752 897 dbSNP
rs185234710 904 dbSNP
rs1410411471 905 dbSNP
rs923018464 909 dbSNP
rs555939983 914 dbSNP
rs768894811 929 dbSNP
rs1455796457 936 dbSNP
rs528913470 940 dbSNP
rs550251722 941 dbSNP
rs902010130 944 dbSNP
rs886059769 946 dbSNP
rs1230145635 952 dbSNP
rs189735907 953 dbSNP
rs1287675062 966 dbSNP
rs1223857794 967 dbSNP
rs1347207115 972 dbSNP
rs1291409643 977 dbSNP
rs1435390956 981 dbSNP
rs1338564828 990 dbSNP
rs1345270705 995 dbSNP
rs1230042908 998 dbSNP
rs1288699015 1001 dbSNP
rs997604518 1007 dbSNP
rs1480947899 1008 dbSNP
rs533342165 1011 dbSNP
rs1226157776 1012 dbSNP
rs1189679832 1015 dbSNP
rs1026441275 1016 dbSNP
rs1210616769 1017 dbSNP
rs1242917060 1017 dbSNP
rs951109868 1024 dbSNP
rs909020763 1025 dbSNP
rs1021067113 1026 dbSNP
rs1313730520 1026 dbSNP
rs1463626336 1026 dbSNP
rs1257316791 1030 dbSNP
rs1483283381 1031 dbSNP
rs967122991 1031 dbSNP
rs1363874632 1036 dbSNP
rs1410346626 1036 dbSNP
rs1432210379 1036 dbSNP
rs1470621706 1036 dbSNP
rs532039350 1036 dbSNP
rs780211351 1036 dbSNP
rs977136704 1036 dbSNP
rs144533426 1040 dbSNP
rs1174312563 1041 dbSNP
rs1184128901 1041 dbSNP
rs1247555785 1041 dbSNP
rs1420447288 1041 dbSNP
rs1447710789 1041 dbSNP
rs1491097909 1041 dbSNP
rs56329138 1041 dbSNP
rs1254690396 1042 dbSNP
rs1491244712 1042 dbSNP
rs1209105799 1043 dbSNP
rs1484299647 1044 dbSNP
rs1016998413 1045 dbSNP
rs886059770 1045 dbSNP
rs12520738 1046 dbSNP
rs373116002 1047 dbSNP
rs1178496800 1048 dbSNP
rs1378335274 1049 dbSNP
rs1381901154 1049 dbSNP
rs1465614782 1050 dbSNP
rs552084607 1051 dbSNP
rs111947110 1052 dbSNP
rs1170857228 1055 dbSNP
rs962429245 1056 dbSNP
rs1389791903 1057 dbSNP
rs1411564526 1060 dbSNP
rs1425662043 1060 dbSNP
rs886059771 1060 dbSNP
rs1366914517 1061 dbSNP
rs1349650062 1063 dbSNP
rs1407675700 1065 dbSNP
rs1302974295 1067 dbSNP
rs200793653 1074 dbSNP
rs548679976 1074 dbSNP
rs886059772 1074 dbSNP
rs1231927776 1075 dbSNP
rs981093040 1076 dbSNP
rs1202580748 1079 dbSNP
rs915849056 1082 dbSNP
rs567019042 1083 dbSNP
rs1319446865 1089 dbSNP
rs534207330 1092 dbSNP
rs1311179231 1094 dbSNP
rs1206453581 1096 dbSNP
rs1228312901 1098 dbSNP
rs1351483890 1102 dbSNP
rs147620363 1105 dbSNP
rs1408402951 1108 dbSNP
rs1370139395 1110 dbSNP
rs181284021 1112 dbSNP
rs748361555 1118 dbSNP
rs991953545 1122 dbSNP
rs74930461 1126 dbSNP
rs1419667852 1128 dbSNP
rs538385274 1129 dbSNP
rs183583946 1130 dbSNP
rs1057270998 1131 dbSNP
rs886059773 1132 dbSNP
rs1431623026 1133 dbSNP
rs1169127745 1137 dbSNP
rs773461245 1138 dbSNP
rs35638526 1147 dbSNP
rs1369813989 1153 dbSNP
rs1487212571 1154 dbSNP
rs575426461 1156 dbSNP
rs140560310 1159 dbSNP
rs1460281982 1160 dbSNP
rs1264420568 1168 dbSNP
rs768299515 1176 dbSNP
rs1330359027 1179 dbSNP
rs1012979646 1180 dbSNP
rs1367891123 1185 dbSNP
rs1350293499 1187 dbSNP
rs1022223701 1190 dbSNP
rs1388658444 1193 dbSNP
rs997740069 1195 dbSNP
rs116166244 1203 dbSNP
rs1298608601 1214 dbSNP
rs1156895522 1218 dbSNP
rs752000054 1220 dbSNP
rs1429809826 1233 dbSNP
rs1200546543 1234 dbSNP
rs144525238 1238 dbSNP
rs999518571 1251 dbSNP
rs1031883020 1252 dbSNP
rs886636759 1263 dbSNP
rs956408933 1282 dbSNP
rs975705298 1286 dbSNP
rs1270545411 1287 dbSNP
rs1207441044 1292 dbSNP
rs1016723627 1296 dbSNP
rs1030059341 1298 dbSNP
rs1235890325 1299 dbSNP
rs1274565111 1303 dbSNP
rs1435853273 1308 dbSNP
rs1367490153 1319 dbSNP
rs1318446872 1320 dbSNP
rs376317466 1327 dbSNP
rs985867602 1328 dbSNP
rs1174057153 1333 dbSNP
rs909046644 1335 dbSNP
rs1224271821 1340 dbSNP
rs188323981 1341 dbSNP
rs1488304023 1344 dbSNP
rs972013133 1345 dbSNP
rs147664329 1348 dbSNP
rs919167332 1349 dbSNP
rs1257498170 1356 dbSNP
rs992091189 1356 dbSNP
rs1202490872 1360 dbSNP
rs913725991 1363 dbSNP
rs1255596698 1379 dbSNP
rs1229487090 1385 dbSNP
rs1344404494 1390 dbSNP
rs1295414065 1398 dbSNP
rs1187934173 1411 dbSNP
rs938688274 1412 dbSNP
rs770914740 1417 dbSNP
rs1426613542 1419 dbSNP
rs1401298199 1423 dbSNP
rs1168820684 1427 dbSNP
rs1043828 1428 dbSNP
rs559306601 1435 dbSNP
rs750325216 1439 dbSNP
rs181871045 1449 dbSNP
rs1190268901 1451 dbSNP
rs1441026744 1455 dbSNP
rs879159913 1460 dbSNP
rs1255982275 1466 dbSNP
rs1206322770 1468 dbSNP
rs1484126577 1473 dbSNP
rs999027080 1487 dbSNP
rs1390311379 1491 dbSNP
rs1031915430 1504 dbSNP
rs1285863842 1505 dbSNP
rs562428288 1508 dbSNP
rs1360552601 1509 dbSNP
rs533589393 1510 dbSNP
rs1029965338 1513 dbSNP
rs1043829 1516 dbSNP
rs953038990 1521 dbSNP
rs1313974371 1524 dbSNP
rs1007724115 1525 dbSNP
rs574559308 1529 dbSNP
rs886605841 1531 dbSNP
rs17132810 1534 dbSNP
rs560844811 1535 dbSNP
rs1472058365 1536 dbSNP
rs1270258183 1539 dbSNP
rs1465481629 1540 dbSNP
rs1183290295 1543 dbSNP
rs1473795574 1550 dbSNP
rs1038283439 1551 dbSNP
rs1204155675 1559 dbSNP
rs149151603 1560 dbSNP
rs1246238949 1564 dbSNP
rs1484875790 1567 dbSNP
rs1002380971 1569 dbSNP
rs549690991 1573 dbSNP
rs1355479398 1579 dbSNP
rs1288930836 1581 dbSNP
rs1183521779 1585 dbSNP
rs867038434 1593 dbSNP
rs1423038986 1594 dbSNP
rs1033318342 1599 dbSNP
rs1162443009 1605 dbSNP
rs1320950047 1607 dbSNP
rs896184370 1616 dbSNP
rs1160610392 1617 dbSNP
rs1473766129 1626 dbSNP
rs550282174 1637 dbSNP
rs1020924980 1638 dbSNP
rs966940347 1643 dbSNP
rs1248681820 1647 dbSNP
rs143279501 1651 dbSNP
rs1268653420 1658 dbSNP
rs1210569773 1661 dbSNP
rs1450892502 1663 dbSNP
rs1326798746 1666 dbSNP
rs1283213338 1674 dbSNP
rs992710796 1677 dbSNP
rs1303947648 1680 dbSNP
rs1369225952 1685 dbSNP
rs964795038 1691 dbSNP
rs1435091561 1694 dbSNP
rs1365360810 1695 dbSNP
rs1378999065 1703 dbSNP
rs1387091567 1705 dbSNP
rs1158757865 1707 dbSNP
rs1231879210 1707 dbSNP
rs1290542755 1711 dbSNP
rs373896741 1717 dbSNP
rs1171076810 1719 dbSNP
rs1453845837 1727 dbSNP
rs1248786798 1732 dbSNP
rs1330135665 1735 dbSNP
rs886059774 1736 dbSNP
rs1227983212 1738 dbSNP
rs886059775 1741 dbSNP
rs11954534 1742 dbSNP
rs1210513715 1743 dbSNP
rs1210831237 1751 dbSNP
rs1237989537 1754 dbSNP
rs1233190900 1755 dbSNP
rs1482861932 1755 dbSNP
rs948748712 1757 dbSNP
rs1299086397 1758 dbSNP
rs1185596369 1764 dbSNP
rs571619514 1766 dbSNP
rs1043570363 1768 dbSNP
rs1449025880 1770 dbSNP
rs942278951 1773 dbSNP
rs886059776 1776 dbSNP
rs1174205695 1779 dbSNP
rs1037851303 1780 dbSNP
rs1391031812 1785 dbSNP
rs1157945309 1786 dbSNP
rs1405272968 1787 dbSNP
rs926047656 1796 dbSNP
rs1176110723 1799 dbSNP
rs934846421 1802 dbSNP
rs539621002 1808 dbSNP
rs1209888723 1811 dbSNP
rs11948089 1813 dbSNP
rs35589685 1816 dbSNP
rs896153383 1820 dbSNP
rs753658956 1821 dbSNP
rs1225497288 1829 dbSNP
rs998398589 1830 dbSNP
rs566319272 1833 dbSNP
rs1229454659 1834 dbSNP
rs886059777 1837 dbSNP
rs1311371605 1845 dbSNP
rs533880368 1850 dbSNP
rs1007218591 1851 dbSNP
rs555218864 1853 dbSNP
rs1427877695 1864 dbSNP
rs1354067480 1873 dbSNP
rs573335815 1879 dbSNP
rs963179300 1884 dbSNP
rs1425411300 1896 dbSNP
rs993218074 1899 dbSNP
rs1219915681 1901 dbSNP
rs754266738 1903 dbSNP
rs886059778 1919 dbSNP
rs1202651224 1921 dbSNP
rs1208639592 1923 dbSNP
rs974791807 1925 dbSNP
rs530574959 1927 dbSNP
rs1323978543 1935 dbSNP
rs1483268678 1936 dbSNP
rs778079962 1936 dbSNP
rs915824490 1938 dbSNP
rs372420714 1941 dbSNP
rs1181107112 1954 dbSNP
rs1351538306 1954 dbSNP
rs1290428380 1955 dbSNP
rs1389952149 1958 dbSNP
rs747255737 1959 dbSNP
rs1478779031 1961 dbSNP
rs748484365 1966 dbSNP
rs1423817099 1976 dbSNP
rs1348013435 1979 dbSNP
rs1164179788 1981 dbSNP
rs925920814 1984 dbSNP
rs907879535 1986 dbSNP
rs963638864 1987 dbSNP
rs1418081555 1990 dbSNP
rs1171018544 1999 dbSNP
rs1267628435 2001 dbSNP
rs974085630 2006 dbSNP
rs1371646795 2012 dbSNP
rs927470357 2014 dbSNP
rs934756834 2016 dbSNP
rs1333067754 2018 dbSNP
rs1054876750 2020 dbSNP
rs1053097439 2021 dbSNP
rs949131555 2026 dbSNP
rs1335351463 2030 dbSNP
rs1302286725 2031 dbSNP
rs187207087 2035 dbSNP
rs1274410857 2042 dbSNP
rs1388563929 2043 dbSNP
rs1368936025 2053 dbSNP
rs1368862819 2054 dbSNP
rs1435810853 2062 dbSNP
rs1390753282 2073 dbSNP
rs1156533103 2079 dbSNP
rs1042054630 2081 dbSNP
rs902202835 2082 dbSNP
rs922773726 2094 dbSNP
rs151283847 2095 dbSNP
rs1177851132 2097 dbSNP
rs1054147718 2105 dbSNP
rs192008817 2107 dbSNP
rs201563752 2110 dbSNP
rs995927033 2111 dbSNP
rs1030129444 2116 dbSNP
rs1004940869 2127 dbSNP
rs1195032786 2130 dbSNP
rs879525203 2132 dbSNP
rs1235778500 2133 dbSNP
rs545595431 2134 dbSNP
rs560564730 2135 dbSNP
rs778087982 2147 dbSNP
rs527887824 2148 dbSNP
rs1304218969 2150 dbSNP
rs1432407334 2150 dbSNP
rs898792676 2176 dbSNP
rs747147499 2181 dbSNP
rs992969882 2184 dbSNP
rs1450823077 2185 dbSNP
rs917442445 2188 dbSNP
rs1189858030 2190 dbSNP
rs1446775884 2197 dbSNP
rs993250647 2200 dbSNP
rs543373185 2206 dbSNP
rs1484780640 2210 dbSNP
rs77742012 2219 dbSNP
rs1166561013 2222 dbSNP
rs886059779 2224 dbSNP
rs1344471175 2226 dbSNP
rs1268330775 2229 dbSNP
rs776672235 2233 dbSNP
rs1340996294 2241 dbSNP
rs1314537159 2246 dbSNP
rs1412721723 2247 dbSNP
rs1393326527 2254 dbSNP
rs1014085738 2255 dbSNP
rs1023330140 2271 dbSNP
rs745812752 2273 dbSNP
rs979055235 2275 dbSNP
rs886059780 2279 dbSNP
rs1393769362 2281 dbSNP
rs1166662040 2293 dbSNP
rs1475336323 2297 dbSNP
rs1190453705 2302 dbSNP
rs1392470778 2302 dbSNP
rs564039603 2310 dbSNP
rs955999756 2313 dbSNP
rs1257048907 2319 dbSNP
rs1298361396 2325 dbSNP
rs988894263 2331 dbSNP
rs1484073393 2334 dbSNP
rs1270887953 2338 dbSNP
rs886059781 2341 dbSNP
rs1356899663 2351 dbSNP
rs922680302 2352 dbSNP
rs934190268 2355 dbSNP
rs140507387 2361 dbSNP
rs1051523443 2367 dbSNP
rs375743173 2374 dbSNP
rs1333628905 2379 dbSNP
rs911351777 2400 dbSNP
rs781389171 2412 dbSNP
rs531757179 2415 dbSNP
rs1358185621 2416 dbSNP
rs1405467079 2423 dbSNP
rs1004909692 2427 dbSNP
rs1167796701 2435 dbSNP
rs1460190976 2450 dbSNP
rs941628954 2455 dbSNP
rs35516657 2462 dbSNP
rs1183357026 2467 dbSNP
rs745983885 2469 dbSNP
rs1231415783 2478 dbSNP
rs1181121842 2480 dbSNP
rs898872292 2486 dbSNP
rs963406773 2493 dbSNP
rs1211808995 2496 dbSNP
rs756274878 2505 dbSNP
rs549858282 2509 dbSNP
rs1447004601 2510 dbSNP
rs958923704 2516 dbSNP
rs895552392 2521 dbSNP
rs571720181 2524 dbSNP
rs1191650563 2525 dbSNP
rs1332375972 2528 dbSNP
rs1328510858 2533 dbSNP
rs1370649615 2535 dbSNP
rs1394412438 2538 dbSNP
rs139765933 2541 dbSNP
rs200667347 2544 dbSNP
rs1473335183 2551 dbSNP
rs1402836672 2557 dbSNP
rs1406019677 2571 dbSNP
rs1014400425 2575 dbSNP
rs1164610515 2575 dbSNP
rs1478391324 2576 dbSNP
rs114702659 2577 dbSNP
rs905656452 2580 dbSNP
rs1467932369 2581 dbSNP
rs566357436 2584 dbSNP
rs886059782 2586 dbSNP
rs1033338782 2587 dbSNP
rs1283102680 2591 dbSNP
rs1346687822 2592 dbSNP
rs533723449 2593 dbSNP
rs936442129 2597 dbSNP
rs1370851722 2598 dbSNP
rs1381634714 2619 dbSNP
rs1316147353 2628 dbSNP
rs1433292953 2632 dbSNP
rs1343864383 2633 dbSNP
rs145768538 2637 dbSNP
rs886059783 2639 dbSNP
rs1453905779 2640 dbSNP
rs747448169 2643 dbSNP
rs886059784 2643 dbSNP
rs886059785 2645 dbSNP
rs1484767920 2659 dbSNP
rs1241236316 2662 dbSNP
rs567195717 2662 dbSNP
rs770321734 2670 dbSNP
rs1277783195 2671 dbSNP
rs1332285754 2685 dbSNP
rs1229814409 2706 dbSNP
rs1296901067 2709 dbSNP
rs1216902171 2710 dbSNP
rs115749505 2713 dbSNP
rs941524448 2715 dbSNP
rs974387288 2716 dbSNP
rs1349351595 2720 dbSNP
rs1449244888 2723 dbSNP
rs1377463656 2730 dbSNP
rs370305538 2732 dbSNP
rs1371315830 2738 dbSNP
rs555847312 2738 dbSNP
rs528818741 2747 dbSNP
rs1426605729 2756 dbSNP
rs1034747239 2759 dbSNP
rs4957925 2765 dbSNP
rs1254930724 2766 dbSNP
rs1024603546 2771 dbSNP
rs967625935 2775 dbSNP
rs1252488460 2778 dbSNP
rs1187739754 2783 dbSNP
rs1306223518 2784 dbSNP
rs769024290 2785 dbSNP
rs1234249629 2792 dbSNP
rs1357814727 2793 dbSNP
rs1291655587 2794 dbSNP
rs181674082 2796 dbSNP
rs755589087 2796 dbSNP
rs773947143 2804 dbSNP
rs1354776387 2811 dbSNP
rs1299913804 2817 dbSNP
rs1160161562 2821 dbSNP
rs1460555299 2825 dbSNP
rs777328398 2826 dbSNP
rs1363380001 2828 dbSNP
rs534202687 2847 dbSNP
rs958003328 2847 dbSNP
rs989268038 2850 dbSNP
rs568593076 2854 dbSNP
rs931682679 2861 dbSNP
rs1252264159 2871 dbSNP
rs1174934534 2882 dbSNP
rs886059786 2884 dbSNP
rs886059787 2893 dbSNP
rs949835743 2901 dbSNP
rs1232789621 2903 dbSNP
rs1214925344 2904 dbSNP
rs553883044 2905 dbSNP
rs1414944968 2918 dbSNP
rs761424887 2927 dbSNP
rs186873182 2928 dbSNP
rs1000428303 2935 dbSNP
rs1389716937 2937 dbSNP
rs1353319883 2943 dbSNP
rs1326490031 2944 dbSNP
rs1054327948 2946 dbSNP
rs1288597068 2947 dbSNP
rs1392222316 2950 dbSNP
rs1163884796 2956 dbSNP
rs1457603693 2958 dbSNP
rs1334768784 2963 dbSNP
rs1365151097 2966 dbSNP
rs1156554980 2967 dbSNP
rs1417989681 2968 dbSNP
rs1036573079 2973 dbSNP
rs543212219 2989 dbSNP
rs1257221903 2992 dbSNP
rs374010555 2992 dbSNP
rs1470181389 3000 dbSNP
rs1251716421 3002 dbSNP
rs930710824 3003 dbSNP
rs1055924076 3004 dbSNP
rs143019353 3014 dbSNP
rs35469468 3021 dbSNP
rs1237237057 3023 dbSNP
rs1210795840 3024 dbSNP
rs1304184667 3034 dbSNP
rs370655295 3041 dbSNP
rs536036294 3047 dbSNP
rs1325190169 3048 dbSNP
rs955336369 3056 dbSNP
rs1007015655 3058 dbSNP
rs570496642 3061 dbSNP
rs903405050 3061 dbSNP
rs1452529963 3069 dbSNP
rs1018767979 3081 dbSNP
rs962941397 3083 dbSNP
rs1375701879 3087 dbSNP
rs1408552199 3091 dbSNP
rs576615598 3093 dbSNP
rs1183259542 3095 dbSNP
rs1393780544 3097 dbSNP
rs749901344 3099 dbSNP
rs6859454 3103 dbSNP
rs951624840 3106 dbSNP
rs1203773138 3107 dbSNP
rs1485638721 3109 dbSNP
rs550840521 3114 dbSNP
rs1378240316 3115 dbSNP
rs565178329 3121 dbSNP
rs886059788 3126 dbSNP
rs957589906 3134 dbSNP
rs1172955281 3137 dbSNP
rs1328136603 3140 dbSNP
rs992374885 3148 dbSNP
rs1293116182 3149 dbSNP
rs569010973 3150 dbSNP
rs1431436804 3152 dbSNP
rs1298485013 3154 dbSNP
rs1011064329 3161 dbSNP
rs1395388749 3162 dbSNP
rs1314381161 3166 dbSNP
rs1028737490 3171 dbSNP
rs953133383 3180 dbSNP
rs916919222 3187 dbSNP
rs949747267 3189 dbSNP
rs1044184945 3196 dbSNP
rs1331163306 3197 dbSNP
rs987061507 3198 dbSNP
rs927021786 3199 dbSNP
rs935871571 3205 dbSNP
rs962244079 3206 dbSNP
rs191350620 3214 dbSNP
rs1344882594 3217 dbSNP
rs1484729881 3225 dbSNP
rs1279617849 3226 dbSNP
rs1196475576 3230 dbSNP
rs1341336763 3233 dbSNP
rs972038242 3234 dbSNP
rs1249587202 3235 dbSNP
rs1206342407 3237 dbSNP
rs377324420 3239 dbSNP
rs1355910098 3252 dbSNP
rs1479803271 3267 dbSNP
rs765709523 3269 dbSNP
rs1294737573 3275 dbSNP
rs1354439559 3276 dbSNP
rs1010113320 3277 dbSNP
rs930534467 3278 dbSNP
rs1399225283 3284 dbSNP
rs1050966987 3285 dbSNP
rs891162784 3287 dbSNP
rs1419118847 3291 dbSNP
rs1191785720 3294 dbSNP
rs1167559306 3296 dbSNP
rs1474316863 3299 dbSNP
rs549593467 3303 dbSNP
rs1007290887 3305 dbSNP
rs1182579179 3325 dbSNP
rs1018384729 3326 dbSNP
rs1170937960 3334 dbSNP
rs559386652 3336 dbSNP
rs1335393466 3339 dbSNP
rs1372288145 3339 dbSNP
rs11543940 3340 dbSNP
rs1274750198 3342 dbSNP
rs569230946 3352 dbSNP
rs538370810 3353 dbSNP
rs1279816384 3360 dbSNP
rs1443718589 3364 dbSNP
rs1025823236 3365 dbSNP
rs951484955 3370 dbSNP
rs1323246409 3371 dbSNP
rs1395874457 3372 dbSNP
rs567232581 3383 dbSNP
rs893290909 3393 dbSNP
rs1368032544 3395 dbSNP
rs996928685 3400 dbSNP
rs1028454304 3411 dbSNP
rs992448419 3413 dbSNP
rs1471195408 3422 dbSNP
rs1362064803 3425 dbSNP
rs918164434 3431 dbSNP
rs1468818671 3435 dbSNP
rs537793586 3440 dbSNP
rs1211558610 3442 dbSNP
rs1008617146 3445 dbSNP
rs766603425 3446 dbSNP
rs1018554148 3452 dbSNP
rs1444286198 3455 dbSNP
rs1225183068 3457 dbSNP
rs886059789 3458 dbSNP
rs935763212 3460 dbSNP
rs1054094768 3467 dbSNP
rs961773472 3470 dbSNP
rs1234414382 3474 dbSNP
rs1372321464 3482 dbSNP
rs1266296840 3485 dbSNP
rs1439140569 3501 dbSNP
rs1349731881 3502 dbSNP
rs1468166025 3506 dbSNP
rs972390522 3507 dbSNP
rs1319391313 3510 dbSNP
rs1402604569 3513 dbSNP
rs1211960093 3520 dbSNP
rs920486110 3524 dbSNP
rs1158080518 3532 dbSNP
rs913107533 3535 dbSNP
rs1454797438 3536 dbSNP
rs1396791600 3542 dbSNP
rs149253873 3543 dbSNP
rs1477574639 3557 dbSNP
rs991293650 3574 dbSNP
rs886059790 3577 dbSNP
rs150659473 3582 dbSNP
rs886059791 3582 dbSNP
rs915765155 3582 dbSNP
rs1349492837 3586 dbSNP
rs950095540 3587 dbSNP
rs1418630961 3595 dbSNP
rs886059792 3595 dbSNP
rs571185214 3599 dbSNP
rs1166595397 3601 dbSNP
rs538614885 3611 dbSNP
rs1291016791 3617 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.602 2.5e-3 0.525 8.7e-3 20 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.817 3.6e-3 -0.583 5.0e-2 9 Click to see details
GSE21687 Ependynoma primary tumors -0.24 2.8e-2 -0.276 1.4e-2 64 Click to see details
GSE14794 Lymphoblastoid cells 0.187 3.9e-2 0.168 5.7e-2 90 Click to see details
GSE19350 CNS germ cell tumors 0.524 4.0e-2 0.497 5.0e-2 12 Click to see details
GSE17306 Multiple myeloma 0.221 6.4e-2 0.075 3.0e-1 49 Click to see details
GSE28544 Breast cancer -0.32 6.4e-2 -0.395 2.8e-2 24 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.311 6.5e-2 0.385 2.9e-2 25 Click to see details
GSE19783 ER- ER- breast cancer -0.16 7.9e-2 -0.120 1.5e-1 79 Click to see details
GSE26953 Aortic valvular endothelial cells 0.269 1.0e-1 0.338 5.3e-2 24 Click to see details
GSE19536 Breast cancer -0.108 1.4e-1 -0.071 2.4e-1 100 Click to see details
GSE21849 B cell lymphoma 0.203 1.5e-1 0.138 2.4e-1 29 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.212 1.5e-1 0.233 1.3e-1 25 Click to see details
GSE27834 Pluripotent stem cells 0.183 2.5e-1 0.097 3.6e-1 16 Click to see details
GSE38226 Liver fibrosis -0.122 3.0e-1 -0.084 3.6e-1 21 Click to see details
GSE42095 Differentiated embryonic stem cells 0.095 3.3e-1 0.054 4.0e-1 23 Click to see details
GSE28260 Renal cortex and medulla -0.108 3.6e-1 -0.258 2.0e-1 13 Click to see details
GSE21032 Prostate cancer 0.039 3.6e-1 -0.036 3.7e-1 83 Click to see details
GSE19783 ER+ ER+ breast cancer 0.03 4.5e-1 0.042 4.3e-1 20 Click to see details
GSE32688 Pancreatic cancer -0.003 4.9e-1 -0.052 3.9e-1 32 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
CHOL -0.653 0.03 -0.350 0.18 9 Click to see details
KIRC -0.214 0.04 -0.178 0.07 68 Click to see details
ESCA -0.371 0.13 -0.673 0.01 11 Click to see details
LIHC 0.149 0.15 0.097 0.25 49 Click to see details
KIRP -0.141 0.22 -0.126 0.25 32 Click to see details
COAD 0.274 0.26 -0.048 0.46 8 Click to see details
PAAD 0.481 0.26 0.600 0.2 4 Click to see details
HNSC -0.091 0.28 -0.059 0.36 42 Click to see details
PCPG -0.611 0.29 -0.500 0.33 3 Click to see details
PRAD -0.075 0.3 -0.167 0.12 50 Click to see details
KICH -0.099 0.32 -0.152 0.23 25 Click to see details
STAD -0.082 0.33 -0.132 0.24 32 Click to see details
CESC -0.441 0.35 -0.500 0.33 3 Click to see details
LUAD 0.11 0.37 -0.147 0.32 12 Click to see details
BLCA 0.081 0.37 0.199 0.21 18 Click to see details
BRCA 0.033 0.38 -0.027 0.4 84 Click to see details
UCEC 0.036 0.44 -0.119 0.31 19 Click to see details
THCA -0.005 0.49 -0.055 0.34 59 Click to see details
LUSC 0.001 0.5 0.061 0.36 38 Click to see details
LUSC 0.001 0.5 0.061 0.36 38 Click to see details
LUSC 0.001 0.5 0.061 0.36 38 Click to see details
152 hsa-miR-361-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT004447 VEGFA vascular endothelial growth factor A 4 3
MIRT020074 U2SURP U2 snRNP associated SURP domain containing 1 1
MIRT020075 RPUSD4 RNA pseudouridylate synthase domain containing 4 1 1
MIRT020076 DEPDC1B DEP domain containing 1B 1 1
MIRT020077 CENPQ centromere protein Q 1 1
MIRT020078 EAPP E2F associated phosphoprotein 1 1
MIRT020079 CD46 CD46 molecule 1 1
MIRT020080 EDC3 enhancer of mRNA decapping 3 1 1
MIRT020081 LHFPL4 LHFPL tetraspan subfamily member 4 1 1
MIRT020082 ZNF92 zinc finger protein 92 1 1
MIRT020083 ZNF776 zinc finger protein 776 1 1
MIRT020084 ARF4 ADP ribosylation factor 4 1 1
MIRT020085 WDR36 WD repeat domain 36 1 1
MIRT020086 ZMYND11 zinc finger MYND-type containing 11 1 1
MIRT020087 FGFR1OP2 FGFR1 oncogene partner 2 1 1
MIRT020088 RAB8B RAB8B, member RAS oncogene family 1 1
MIRT020089 TNRC6A trinucleotide repeat containing 6A 1 1
MIRT020090 CEBPG CCAAT/enhancer binding protein gamma 1 1
MIRT020091 KLHL28 kelch like family member 28 1 1
MIRT020092 G3BP2 G3BP stress granule assembly factor 2 1 1
MIRT020093 SRSF3 serine and arginine rich splicing factor 3 2 3
MIRT020094 RNF141 ring finger protein 141 1 1
MIRT020095 YOD1 YOD1 deubiquitinase 1 1
MIRT020096 DUSP3 dual specificity phosphatase 3 2 3
MIRT020097 NCEH1 neutral cholesterol ester hydrolase 1 1 1
MIRT020098 GTF2E1 general transcription factor IIE subunit 1 1 1
MIRT020099 PHACTR4 phosphatase and actin regulator 4 1 1
MIRT020100 ZC3H12C zinc finger CCCH-type containing 12C 1 1
MIRT020101 ARCN1 archain 1 1 1
MIRT020102 RNF4 ring finger protein 4 1 1
MIRT020103 CPOX coproporphyrinogen oxidase 1 1
MIRT020104 CDC123 cell division cycle 123 1 1
MIRT044053 SLC30A5 solute carrier family 30 member 5 1 1
MIRT044054 ATP6V1A ATPase H+ transporting V1 subunit A 1 1
MIRT044055 TMEM62 transmembrane protein 62 1 1
MIRT044056 ZNF554 zinc finger protein 554 1 1
MIRT044057 MAGEF1 MAGE family member F1 1 1
MIRT044058 GRK6 G protein-coupled receptor kinase 6 1 1
MIRT044059 DDX23 DEAD-box helicase 23 1 1
MIRT044060 BSG basigin (Ok blood group) 1 1
MIRT044061 VCPIP1 valosin containing protein interacting protein 1 1 1
MIRT044062 VCP valosin containing protein 1 1
MIRT044063 PTCD3 pentatricopeptide repeat domain 3 1 1
MIRT044064 SLC25A5 solute carrier family 25 member 5 1 1
MIRT044065 ZNF207 zinc finger protein 207 1 1
MIRT044066 EGFL7 EGF like domain multiple 7 1 1
MIRT044067 SETD1A SET domain containing 1A 1 1
MIRT044068 KIAA1549L KIAA1549 like 1 1
MIRT044069 COX1 cytochrome c oxidase subunit I 1 1
MIRT044070 SON SON DNA binding protein 1 1
MIRT044071 HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 1 1
MIRT044072 PPA1 pyrophosphatase (inorganic) 1 1 1
MIRT044073 DCTN1 dynactin subunit 1 1 1
MIRT044074 ERAL1 Era like 12S mitochondrial rRNA chaperone 1 1 1
MIRT044075 CYCS cytochrome c, somatic 1 1
MIRT044076 ACTG1 actin gamma 1 1 1
MIRT044077 RANBP17 RAN binding protein 17 1 1
MIRT044078 QTRTD1 queuine tRNA-ribosyltransferase accessory subunit 2 1 1
MIRT044079 NCOA6 nuclear receptor coactivator 6 1 1
MIRT044080 ACLY ATP citrate lyase 1 1
MIRT044081 LNPEP leucyl and cystinyl aminopeptidase 1 1
MIRT044082 C14orf80 tubulin epsilon and delta complex 1 1 1
MIRT044083 VBP1 VHL binding protein 1 1 1
MIRT044084 OGDH oxoglutarate dehydrogenase 1 1
MIRT044085 ASH1L ASH1 like histone lysine methyltransferase 1 1
MIRT044086 MDC1 mediator of DNA damage checkpoint 1 1 1
MIRT044087 RPS2 ribosomal protein S2 1 1
MIRT044088 UCK2 uridine-cytidine kinase 2 1 1
MIRT044089 PRPF8 pre-mRNA processing factor 8 1 1
MIRT044090 GSPT1 G1 to S phase transition 1 1 1
MIRT044091 CALCOCO2 calcium binding and coiled-coil domain 2 1 1
MIRT044092 USP22 ubiquitin specific peptidase 22 1 1
MIRT044093 HSPA1B heat shock protein family A (Hsp70) member 1B 1 1
MIRT044094 CNOT2 CCR4-NOT transcription complex subunit 2 1 1
MIRT044095 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 1 1
MIRT044096 WBP2 WW domain binding protein 2 1 1
MIRT044097 ZBTB33 zinc finger and BTB domain containing 33 1 1
MIRT044098 GPC6 glypican 6 1 1
MIRT044099 PRKCSH protein kinase C substrate 80K-H 1 1
MIRT044100 EIF3C eukaryotic translation initiation factor 3 subunit C 1 1
MIRT044101 SUPT16H SPT16 homolog, facilitates chromatin remodeling subunit 1 1
MIRT044102 DOCK6 dedicator of cytokinesis 6 1 1
MIRT044103 ECD ecdysoneless cell cycle regulator 1 1
MIRT044104 EPHA4 EPH receptor A4 1 1
MIRT044105 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT044106 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT044107 RAE1 ribonucleic acid export 1 1 1
MIRT044108 RAVER1 ribonucleoprotein, PTB binding 1 1 1
MIRT044109 TP53BP1 tumor protein p53 binding protein 1 1 1
MIRT044110 COPS7A COP9 signalosome subunit 7A 1 1
MIRT044111 GTDC2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 1 1
MIRT044112 CDK2 cyclin dependent kinase 2 1 1
MIRT044113 NOP2 NOP2 nucleolar protein 1 1
MIRT112226 MDM4 MDM4, p53 regulator 2 2
MIRT127737 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT226898 RAD23B RAD23 homolog B, nucleotide excision repair protein 2 2
MIRT235959 BACH1 BTB domain and CNC homolog 1 2 2
MIRT241215 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT243416 ZMAT3 zinc finger matrin-type 3 2 2
MIRT294566 ZNF460 zinc finger protein 460 2 4
MIRT321041 RAC1 Rac family small GTPase 1 2 4
MIRT437351 STAT6 signal transducer and activator of transcription 6 3 1
MIRT438339 SND1 staphylococcal nuclease and tudor domain containing 1 3 1
MIRT444521 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT447699 ERP44 endoplasmic reticulum protein 44 2 2
MIRT464962 TWIST1 twist family bHLH transcription factor 1 2 2
MIRT468193 SGK1 serum/glucocorticoid regulated kinase 1 2 2
MIRT473767 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT482630 AAR2 AAR2 splicing factor homolog 2 2
MIRT484150 CENPN centromere protein N 2 2
MIRT490457 PROSER2 proline and serine rich 2 2 2
MIRT493066 MTCH1 mitochondrial carrier 1 2 2
MIRT493579 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 8
MIRT506495 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT514833 ZNF154 zinc finger protein 154 2 6
MIRT519028 KYNU kynureninase 2 6
MIRT521750 PPIL1 peptidylprolyl isomerase like 1 2 4
MIRT522899 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 4
MIRT527368 MGARP mitochondria localized glutamic acid rich protein 2 2
MIRT530684 C8orf46 chromosome 8 open reading frame 46 2 2
MIRT531397 TMEM18 transmembrane protein 18 2 2
MIRT533163 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT534579 RPL28 ribosomal protein L28 2 2
MIRT545955 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT553282 TSR1 TSR1, ribosome maturation factor 2 2
MIRT553531 TMEM185B transmembrane protein 185B 2 4
MIRT555601 PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma 2 2
MIRT556005 NAPG NSF attachment protein gamma 2 2
MIRT556738 KLHL15 kelch like family member 15 2 2
MIRT556971 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT558904 CCDC58 coiled-coil domain containing 58 2 2
MIRT559220 BLMH bleomycin hydrolase 2 2
MIRT559821 SLPI secretory leukocyte peptidase inhibitor 2 2
MIRT562671 AKT3 AKT serine/threonine kinase 3 2 2
MIRT564793 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT564827 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT570505 TFIP11 tuftelin interacting protein 11 2 2
MIRT571381 JKAMP JNK1/MAPK8-associated membrane protein 2 2
MIRT572562 AFF1 AF4/FMR2 family member 1 2 2
MIRT610398 AR androgen receptor 2 2
MIRT641614 DEFB118 defensin beta 118 2 2
MIRT642143 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT643846 EPGN epithelial mitogen 2 4
MIRT651751 VEGFB vascular endothelial growth factor B 2 2
MIRT657353 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT662436 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT700990 PDE3A phosphodiesterase 3A 2 2
MIRT707393 DCAF4L1 DDB1 and CUL4 associated factor 4 like 1 2 2
MIRT712064 XRCC5 X-ray repair cross complementing 5 2 2
MIRT721145 PLCL1 phospholipase C like 1 (inactive) 2 2
MIRT724466 SMAD2 SMAD family member 2 2 2
MIRT731374 CXCR6 C-X-C motif chemokine receptor 6 1 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-361 Diethylstilbestrol approved 448537 Microarray mammosphere-derived epithelial cells (MDEC) 19549897 2009 down-regulated
miR-361 Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
miR-361 1,2,6-Tri-O-galloyl-beta-D-glucopyranose NULL NULL Microarray HepG2 hepatocarcinoma cells. 22506400 2011 down-regulated
miR-361 Tamoxifen approved 2733526 Microarray rat liver 17343880 2007 down-regulated
miR-361 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
miR-361 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
miR-361-5p Glucocorticoid NULL NULL TaqMan low-density array Eosinophilic esophagitis 22815788 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-361 Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780CIS)
hsa-mir-361 Cisplatin 5460033 NSC119875 approved sensitive cell line (W1)
hsa-mir-361 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-mir-361 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-361 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-361-5p (5r,6s)-5-phenyl-3,4-diazatricyclo[8.4.0.02,6]tetradeca-1(14),2,10,12-tetraene-4-carbothioamide 5467466 NSC652809 sensitive
hsa-miR-361-5p (7-acetamido-2-acetyloxy-1-methoxy-10-methylsulfanyl-9-oxo-6,7-dihydro-5H-benzo[a]heptalen-3-yl) acetate 435732 NSC374980 sensitive
hsa-miR-361-5p [(4e,6z,8r,9r,10e,12r,13r,14r,16r)-9-carbamoyloxy-8,14-dimethoxy-4,10,12,16-tetramethyl-3,20,22-trioxo-19-(prop-2-enylamino)-2-azabicyclo[16.3.1]docosa-1(21),4,6,10,18-pentaen-13-yl] 5-aminopentanoate 5469153 NSC683666 sensitive
hsa-miR-361-5p 1-(acetyloxy)-2-(2-(1-(acetyloxy)-1h-benzimidazol-2-yl)phenyl)-1h-benzimidazole 355531 NSC609356 sensitive
hsa-miR-361-5p 2-(1-naphthyl)-5,7-dimethyl-1,8-naphthyridin-4(1h)-one 5468781 NSC676184 sensitive
hsa-miR-361-5p 2-(3-chlorophenyl)-4-phenyl-5,7-dihydropyrido[3,2-d][1]benzazepin-6-one 389012 NSC684480 resistant
hsa-miR-361-5p 2-[(3,4-dicloro)anilino]-3-phenyl-5,7-diamino quinoxaline 24203444 NSC728037 sensitive
hsa-miR-361-5p 2-acetyl-1,2-dihydroellipticine 376328 NSC657149 resistant
hsa-miR-361-5p 3-[(2,3-dimethoxyphenyl)methyl]-7,8-dimethoxy-5-methylsulfanyl-2,5-dihydro-1H-3-benzazepin-4-one 359177 NSC619859 sensitive
hsa-miR-361-5p 4-[3-(3,4-dihydro-1h-isoquinolin-2-yl)prop-1-en-2-yl]-n-pyrazin-2-ylbenzamide 24205286 NSC734949 sensitive
hsa-miR-361-5p 6-(acetylamino)-2-(3-fluorophenyl)quinolin-4(1h)-one 376375 NSC657277 sensitive
hsa-miR-361-5p 6-aryl alkyl fluoro quinolone derivative 135465400 NSC731099 resistant
hsa-miR-361-5p 7-bromo-2,4,7-triphenyl-6H-benzo[a]quinolizin-5-ium;bromide 386208 NSC677924 sensitive
hsa-miR-361-5p 7-epi-10-deacetylbaccatin iii 6712096 NSC656178 sensitive
hsa-miR-361-5p Acetonitrile;iridium;tetramethyl buta-1,3-diene-1,2,3,4-tetracarboxylate;triphenylphosphane;triphenylphosphanium;tetrafluoroborate 498529 NSC630734 sensitive
hsa-miR-361-5p Antineoplastic-642316 369949 NSC642316 sensitive
hsa-miR-361-5p Auranofin 6333901 NSC321521 sensitive
hsa-miR-361-5p Ayanin 5280682 NSC691652 resistant
hsa-miR-361-5p Bis(trifluoromethylsulfonyl)azanide;trihexyl(tetradecyl)phosphanium 11181836 NSC747251 sensitive
hsa-miR-361-5p Capri blue 102162 NSC7821 sensitive
hsa-miR-361-5p Cbdive_010867 269887 NSC111580 resistant
hsa-miR-361-5p D.b.t.c. 12688 NSC2604 sensitive
hsa-miR-361-5p Ethyl 3-(9-chloro-4-hydroxy-2,5,11-trimethyl-6h-pyrido[3,2-b]carbazol-3-yl)propanoate 386719 NSC679261 sensitive
hsa-miR-361-5p Ethyl 6-chloro-4-phenyl-2-(piperazin-1-ylmethyl)quinoline-3-carboxylate 369623 NSC641536 sensitive
hsa-miR-361-5p Jasplakinolide epoxide c 372550 NSC647763 sensitive
hsa-miR-361-5p Methyl 11h-pyrido[2,3-a]carbazole-5-carboxylate 13776879 NSC740203 resistant
hsa-miR-361-5p N'-butyl-4-[2-[2-[4-(N'-butylcarbamimidoyl)phenoxy]ethylsulfanyl]ethoxy]benzenecarboximidamide;hydrochloride 54613223 NSC750501 sensitive
hsa-miR-361-5p N-(1,2,3-trihydroxy-10-methylsulfanyl-9-oxo-6,7-dihydro-5h-benzo[a]heptalen-7-yl)benzamide 369939 NSC642306 sensitive
hsa-miR-361-5p Rogiolol 402519 NSC716545 sensitive
hsa-miR-361-5p Salinomycin, sodium 60148415 NSC758465 sensitive
hsa-miR-361-5p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-361-5p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-361-5p Docetaxel 148124 NSC628503 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-361-5p Docetaxel 148124 NSC628503 approved sensitive High Breast Cancer cell line (MCF-7, MDA-MB-231)
hsa-miR-361-5p Methotrexate 126941 NSC740 approved resistant High Colon Cancer cell line (HT-29)
hsa-miR-361-5p Methotrexate 126941 NSC740 approved resistant High Colon Cancer cell line (HT-29)
hsa-miR-361-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7, LY2)
hsa-miR-361-5p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (RKO)
hsa-miR-361-5p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-361-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-miR-361-5p Fluorouracil 3385 NSC19893 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-miR-361-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (PANC-1)
hsa-miR-361-5p Platinum-based doublet chemotherapy resistant High Lung Adenocarcinoma tissue
hsa-miR-361-5p Doxorubicin 31703 NSC123127 approved sensitive High Gastric Cancer cell line (SGC7901)
hsa-miR-361-5p Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-361-5p Platinum 23939 resistant High Ovarian Cancer tissue
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive Low Cervical Cancer tissue
hsa-miR-361-5p Aromatase Inhibitor sensitive Low Breast Cancer cell line (MCF-7)
hsa-miR-361-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-361-5p Gemcitabine 60750 NSC613327 approved resistant High Cholangiocarcinoma cell line (CCLP-1, MzChA-1)
hsa-miR-361-5p Docetaxel 148124 NSC628503 approved sensitive Low Gastric Cancer cell line (SGC-7901, MKN28)
hsa-miR-361-5p Paclitaxel 36314 NSC125973 approved sensitive Low Prostate Cancer cell line (PC-3-R)
hsa-miR-361-5p Fluorouracil 3385 NSC19893 approved sensitive High Gastric Cancer cell line (MGC-803)
hsa-miR-361-5p Paclitaxel 36314 NSC125973 approved sensitive High Endometrial Serous Carcinoma cell line (USPC1)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780CIS)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive Low Hepatocellular Carcinoma cell line (Huh-7)
hsa-miR-361-5p Sorafenib 216239 NSC747971 approved resistant High Hepatocellular Carcinoma cell line (HepG2)
hsa-miR-361-5p Temozolomide 5394 NSC362856 approved resistant cell line (U251)
hsa-miR-361-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-361-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-361-5p Paclitaxel 36314 NSC125973 approved resistant cell line (SKVO3ip1)
hsa-miR-361-5p Paclitaxel 36314 NSC125973 approved resistant cell line (HeyA8)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CP20)
hsa-miR-361-5p Testosterone+Tamoxifen sensitive cell line (MCF-7)
hsa-miR-361-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-361-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-361-5p 4-Hydroxytamoxifen+Tamoxifen sensitive cell line (LY2)
hsa-miR-361-5p Ethanol+Tamoxifen sensitive cell line (LY2)
hsa-miR-361-5p Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-miR-361-5p Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-miR-361-5p Oxaliplatin 6857599 NSC266046 approved resistant cell line (IGROV-1)
hsa-miR-361-5p Neoadjuvant chemotherapy resistant tissue (breast cancer)
hsa-miR-361-5p Neoadjuvant chemotherapy resistant tissue (breast cancer)
hsa-miR-361-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)
hsa-miR-361-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MDAH-2774)

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