pre-miRNA Information
pre-miRNA hsa-mir-10a   
Genomic Coordinates chr17: 48579838 - 48579947
Synonyms MIRN10A, hsa-mir-10a, miRNA10A, mir-10a, MIR10A
Description Homo sapiens miR-10a stem-loop
Comment This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-10a-5p
Sequence 22| UACCCUGUAGAUCCGAAUUUGUG |44
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30152819 13 COSMIC
COSN30458892 14 COSMIC
COSN23023008 15 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1333990950 2 dbSNP
rs770328167 3 dbSNP
rs1453440972 5 dbSNP
rs1391955925 7 dbSNP
rs1157653116 8 dbSNP
rs760091682 10 dbSNP
rs1161287321 12 dbSNP
rs369632753 13 dbSNP
rs985848773 14 dbSNP
rs772649724 18 dbSNP
rs529115879 22 dbSNP
rs375865628 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
B6HZE2 miR-10a Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Muscle Reverse transcription-polymerase chain reaction
Gene Information
Gene Symbol TRIM2   
Synonyms CMT2R, RNF86
Description tripartite motif containing 2
Transcript NM_001130067   
Other Transcripts NM_015271   
Expression
Putative miRNA Targets on TRIM2
3'UTR of TRIM2
(miRNA target sites are highlighted)
>TRIM2|NM_001130067|3'UTR
   1 TGGTGGGCAGGTGGATACCCGCTTCCATGGTCTTGCACTATAAACTGGAATGGATTTCTCAATGCGGGACCAGATTATGA
  81 CTAGAGTTTTTATGCCAGAAGGAATCATTGGTGAACTTTCCAAGGTTATTTCTGAATGTAACAATTTCCTTAAAAATGAC
 161 TTATCCAATTTCTGTATTTCACCTTTAGGGTTAAAAAAAACTCTTCTACTGAATCTATAAAAACTGCAGTTTTACATCTG
 241 TGAACTATGGCTTAAGGGACAGGATTTATGTAGCTAAACTAATTTTGCAAATCAAACAGACACTTAAAAAACTAGCATAT
 321 GTAAAGGTATTCGTTAATCCTGTGAATGGTAGCTTTTGCACAGAACTTCCAAAAGCAAAACAAAAACAAAATCTATTGTA
 401 GTTATATACTTCATTTAACCTAGGTCACAAGACCCAGGGAATCTTCTAACCTCACTTTTACAGTAGGTATTACTCTTGTG
 481 ACATTTTTTTGGTTATCAACAACTAAATATAAATTACTTTGGAAAAAGTAAGGCTGTCTTGCAAAATGATCCCAGCTCTG
 561 ATTAGCAGCCCTCTGGAGTTCAGAACTTAAGTATCAGTGCAAATTTCTCAACCTTTCTGGGTTAGACAAAGATCCTTTTT
 641 TGTGTGTTCTTTTCACCACCCCTTTGGCTCACCTTGTATCAGCAAACAAAGTACTTCTTCAGGGAAACCTGAAATTTCTA
 721 ATGCCTTGAAAAGCATATTACAAAAGTAATGCTACCTTTTGGGAAACAAACTGCCCCGTTAACTCCAGATCATTGCACTG
 801 GAATGTAATCAAGAAAGTTAGTCATGTTTTATGTACCATGTTTTCACACGTGTCTCTTCTCTTCGACTTCCTGAAAGCGA
 881 AAGCTTTACCTCCTGCAAATGTCAGCACATGTAGTAGGACACCAGTATCCTAGGACAGAGAGCCATAAGTAGCCCTTTGG
 961 AGGACTGATGGTGTCAACCAAAGGCATGTGATTGATTAATGATTCCCCCTTAGAAAGCAAGTGTTACCAAAGTTGTGTTA
1041 TCTTGAAAGCATTACAGGTAAGGGCATGTTATGGTTATTTATCATTGTTTAATGAATAGTAGAGGTGTCAAGGGACTATG
1121 TATACATGATTAGGGTAAGATAGAATGTATTATATATATATATATATACACACACACATATATATAGCTGAATCTTTGGT
1201 GTATTGAAATAGGCAGCACTCTGAAAGACAGAAGCTTCGTCCAGCCACTCTTCAGCACATTCCTTTACTAAGCAGTTTAA
1281 AGCCGTCCTAGTGGAGCAAGCCCTAAAGCAGATTTAATTTTTGCCATTTTCCAAGAATGACGGTGGTGGCTTTTAGTCAG
1361 AAAATGGCCTTCTGTGCTTTCAAAAAAAAAAACAAAAAAAAAACCACACACACACATAAAAAACCCAACAGGTCAAAATA
1441 AAAGTTGAACTTGAGTTACATTTAATTTAAATATAAATGCATTTTGAGAAATGTTAAGAACAATTTAGTCAATCGTTCAT
1521 CTGTCATTGGTACTGTAAAATAAGCTGTGGTCTATTTCCACTGTTTAATTTTCTACTCAGTTCTACCAAATAGGATGTCA
1601 TGTTTGACATTTTTGATAGTGACTTTGGGGTCTTCTTCACTGAAAGCACCTTAGAACTGTACTATAAGAAAACATTTCCC
1681 CTATGTATAATTATATGAATGTGATGTTTATTGCTTATTAATTTATAATTCAGTCATTCTCTATATAGGACTTCTTAAAA
1761 TTTAGAAGGGAAATCTAGCTACTTCAAATTGTCTGTTAAATTTATTATGCCCAAATCAACCTCTGAAAAAAGGTTTTTCC
1841 AGGAAGATTTACATTTAGGTTTAATATTTTTTTAGTTAGGTAGAGTTTTAAAAAATACTTGAGCCTGTCCGTGATAAAGC
1921 TATAAAATTCAATAACTTTTTAGAATGTTAAATGAAGACACTGTTTCCTAACATCAGTGAGATACATCTTTGAATTTAAA
2001 CATTCATATTTACTGAGTACCTACTAGGTACCAAGTACTCTTTTAGGCACTGGAAATACAGTGATGGACAAAACAGGTAA
2081 AAAATCGCTGCCCCCTCAGAGCTGACATTCTGGGGTGGGAATTTCATTTTGCCACGTACTAACGTTCTGCACAAAAGACA
2161 GGCTAGACTCTTGTCTAGATTGTTTAAAAGAAACTTTTCAAATTGGTTACATTAATTTTAGTTTATTTTCACAAGTAAAA
2241 ATGGCTTTTTATTTAGATTCTTTCTGTCCCAGGCTGTTGATCTTAAAACTAGTTGATTTAAAGAGTTTTTTTGCACAACA
2321 TTTCAATTATATTTGTGAACTTAGAAATTAACTTACAATCTAACCAGCCATCATATCATATCCTATCAGGCTAGATATCT
2401 CAATAGTAGACTGAATACAAAGCTAATTTTTTTTACATGTCAATATTGGCACAAACTGGAATGAAAGAATAGTTTGATTC
2481 AGACCTGCTCCACTATGTGTTGCTAAAACACATGCTATGAGCACTCCAGGAAACACTATATTTTTTCCAAAAAATATGTG
2561 ATTATATATGTTAAAGTATAGATAACATTTCACACTTGGATACATATGTGCATTTACTGTATTTCTTGGTAAGCATATTT
2641 TTGGGGGAAAGTGCTGCTGATATGATACAAGTAGACAAAATTTAAATGAAATTTTGTCACATTCTATGGAAAATGGTTTC
2721 TGGTAAACTGAGAAGGATATTAAAATAAGTGGCTTTTTTCTGGGCTACCATTATTGTTTGATTTCTCTTTGTCAAGTGTA
2801 TAGAACCTGTCATACATTCATGATAAGTAGCACTGAAAAATTACTCATTCAAATTTCCCCTGGGCACGTAAGGCAAAATA
2881 TTGCCGGTTGGGATTTCAAGGTCAGTGACGACGCATTTCCTCCCAGTACAGACCCCCCAGCCCCCCTTGCTGGACATGGG
2961 GAGGCAGAGAGTCACTTGACCATCCAGAAATACATGACTACAAGTCCTTTATGACTGTTTGCCATTTTTTTTAATGGTAC
3041 TTAGTATTTTGATCAAACTTTAGTCTCCAGAACTAAACAAGTCCCTAAGTTTCCTTATTTTAATTTACTGTGACTAGATT
3121 TGAAGCAAATAAATACTCCAGATCCATGCAGCTAGAACACACTTGCTTCCACTACTAAATATACAGGGTATGTCCTAACA
3201 TGGAGTTAACTGGAATAGCAGTACACTAGCAAGTATCTGTGAATCCTTAGCACTGACGGGTTAACAGAAATGCTTTGGTA
3281 ATACCTACTTAGTTAATTGGAGGAAGTAGTAAATAAACATTAGGTAATCTGCAGATTACTTCAAATGGGAAAAATCTTTT
3361 TGTAGACTCTATAGTACCCTCTCTATTCACTAGCTTCTGAAAAGGGAGGAGTATTTTTAGTTTGACAATTTAATAATTTA
3441 AAAACAAGACATCTCCAGGTAGGAAAAAATGAAAGCTATTTCATGCAAACATTATCTAATTTAGCTTAAAAGTGAAAGTG
3521 GTAATACTGTTGGTTTCTGTAAATGTTGCAGGGTTTTAAACTTTATAATTACTTTAATATTTTTGATAACTAGAAATCTA
3601 GTATTGCCATAAAGGAAACTAAGTGCCCATCAAAGATTTGTTTGGTATAAATAAAGAATTATTTGTTTTGTTTTCAATGA
3681 CAGTAAGCTACAAATCATGATGCTTAAAAACTTTCTAAAGATGAATTGTGTGGCAGTGATTGGTCTGTTTGTGGAGAATG
3761 TATGAAAGCTATTAATATTCTAGAATAGATTAATAAATTGGCTATGTTGTTCCAATGAATGTACAGCACTTCCATTAACT
3841 TTTGAAAGCAACACAGCCTTAAACTCAATGCTTTTGCTTTATGACATGGGAATGTTCTGTCATCAATGGAGTGTATTCTT
3921 GTAATAGAATTCTTTATATCGTTCTCAATTCTATAGACTTTCAAGCCTATGTATGAATATGAAGGGGTTTTTTTTTTTTG
4001 CTTTGTTTTCTTTTTAGATTTTGTACATTCCATCTTTATAGGTCTGTTTCATATGTTTTATGTATAGAACACTAAGTCTT
4081 GCACTCTCTGACATTGATACTGATATATTCTCGTCATTTGTTCTTTTATGAATCAAAATGTTGACTGCCTATTTAAAGAA
4161 AAGAATGAACGCTGTGCATCAAAGTGTTTGTATGTTCGTAGCTACATACGTACCACAGTATTTTGGATGCTTTAGTCTAC
4241 AATGAAACTTTCAATTAATTCTGTCTTGAAACATAGGAGAAACAGGATTCATGTGTATCTCTTTACCATGCACAAAATCT
4321 CAAATCATTATAATAAAGCTTGTTTTCTCCATTTGC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' guguuuaagccUAGAUGUCCCAu 5'
                     || |||||||| 
Target 5' tccactactaaATATACAGGGTa 3'
3168 - 3190 152.00 -14.35
2
miRNA  3' guguuuAAGCC---UA-GAUGUCCCAu 5'
                ||| |   || :|:|||||| 
Target 5' gttggtTTCTGTAAATGTTGCAGGGTt 3'
3529 - 3555 137.00 -14.24
3
miRNA  3' gugUUUAAGCCUAGAUGUCCCAu 5'
             ||  | |||   ||||| | 
Target 5' tgaAACATAGGAGAAACAGGATt 3'
4267 - 4289 120.00 -9.52
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30505556 22 COSMIC
COSN30745918 66 COSMIC
COSN30510596 79 COSMIC
COSN30142865 89 COSMIC
COSN31548772 111 COSMIC
COSN28871751 201 COSMIC
COSN20100643 312 COSMIC
COSN20139484 370 COSMIC
COSN1289681 631 COSMIC
COSN28628179 778 COSMIC
COSN195067 840 COSMIC
COSN21304773 861 COSMIC
COSN20691348 1106 COSMIC
COSN23987333 1168 COSMIC
COSN20100646 1169 COSMIC
COSN16904612 1170 COSMIC
COSN14841997 1178 COSMIC
COSN31540879 1188 COSMIC
COSN29504750 1239 COSMIC
COSN31513396 1287 COSMIC
COSN31593003 1302 COSMIC
COSN31544680 1343 COSMIC
COSN15662245 1393 COSMIC
COSN20100647 1393 COSMIC
COSN27341069 1394 COSMIC
COSN28716542 1395 COSMIC
COSN31608883 1506 COSMIC
COSN25918617 1516 COSMIC
COSN16941083 1579 COSMIC
COSN31523473 1732 COSMIC
COSN24300806 1841 COSMIC
COSN31515561 1926 COSMIC
COSN22525544 2058 COSMIC
COSN31542659 2304 COSMIC
COSN31551360 2435 COSMIC
COSN31552284 2448 COSMIC
COSN26554509 2450 COSMIC
COSN28675083 2528 COSMIC
COSN31596586 2616 COSMIC
COSN31526397 2738 COSMIC
COSN27560580 2760 COSMIC
COSN31523498 2824 COSMIC
COSN31485717 2914 COSMIC
COSN31538081 2996 COSMIC
COSN31576803 3033 COSMIC
COSN31576783 3035 COSMIC
COSN24300464 3266 COSMIC
COSN32056513 3286 COSMIC
COSN5557679 3352 COSMIC
COSN5010297 3384 COSMIC
COSN9886492 3451 COSMIC
COSN31517294 3467 COSMIC
COSN31486198 3511 COSMIC
COSN31541635 3552 COSMIC
COSN26576922 3571 COSMIC
COSN31547416 3797 COSMIC
COSN31548602 3928 COSMIC
COSN24300807 3941 COSMIC
COSN26643981 3957 COSMIC
COSN31481979 3963 COSMIC
COSN26649473 3988 COSMIC
COSN31545283 3990 COSMIC
COSN20100649 4000 COSMIC
COSN20100650 4000 COSMIC
COSN28237482 4051 COSMIC
COSN1999682 4105 COSMIC
COSN1999683 4110 COSMIC
COSN31548614 4211 COSMIC
COSN31520414 4227 COSMIC
COSN15777844 4277 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs968843793 4 dbSNP
rs1165118644 5 dbSNP
rs1000339522 6 dbSNP
rs200098529 8 dbSNP
rs908345919 9 dbSNP
rs1417350662 12 dbSNP
rs1299441944 13 dbSNP
rs777666827 14 dbSNP
rs531286886 16 dbSNP
rs200209220 17 dbSNP
rs956275622 18 dbSNP
rs753728862 20 dbSNP
rs756843619 21 dbSNP
rs777232287 22 dbSNP
rs1426672975 25 dbSNP
rs1192476954 26 dbSNP
rs1285583726 28 dbSNP
rs1351734598 29 dbSNP
rs771732777 31 dbSNP
rs969737644 38 dbSNP
rs1441885434 39 dbSNP
rs979838314 41 dbSNP
rs1229080055 42 dbSNP
rs1239715227 43 dbSNP
rs1358786234 44 dbSNP
rs1473339352 47 dbSNP
rs1038242366 63 dbSNP
rs549630838 66 dbSNP
rs747583197 67 dbSNP
rs1401253068 73 dbSNP
rs568184127 75 dbSNP
rs535182375 79 dbSNP
rs905097512 83 dbSNP
rs937969076 84 dbSNP
rs548896290 87 dbSNP
rs554454953 87 dbSNP
rs1264478148 88 dbSNP
rs909605423 108 dbSNP
rs566268683 109 dbSNP
rs1009278871 110 dbSNP
rs941109760 112 dbSNP
rs1271158458 120 dbSNP
rs538908761 123 dbSNP
rs1036828482 125 dbSNP
rs1212550349 130 dbSNP
rs111733088 134 dbSNP
rs1278662850 144 dbSNP
rs1220361387 150 dbSNP
rs1343636771 151 dbSNP
rs558446823 159 dbSNP
rs1051493161 162 dbSNP
rs576380608 166 dbSNP
rs1326480037 171 dbSNP
rs1465386426 175 dbSNP
rs1369244912 182 dbSNP
rs1173325035 184 dbSNP
rs1479738520 185 dbSNP
rs1007542622 191 dbSNP
rs1429271582 191 dbSNP
rs556330614 193 dbSNP
rs964616270 193 dbSNP
rs543764385 199 dbSNP
rs1458416489 201 dbSNP
rs555460152 201 dbSNP
rs1161737768 209 dbSNP
rs772506226 217 dbSNP
rs982779841 219 dbSNP
rs908629792 220 dbSNP
rs146530973 222 dbSNP
rs974297897 228 dbSNP
rs926487494 229 dbSNP
rs1277313027 233 dbSNP
rs1381959370 238 dbSNP
rs937889263 240 dbSNP
rs1317252737 241 dbSNP
rs1000688666 242 dbSNP
rs541200348 245 dbSNP
rs1359020568 256 dbSNP
rs896439483 262 dbSNP
rs1435478929 276 dbSNP
rs541122511 292 dbSNP
rs1176759568 295 dbSNP
rs185745713 302 dbSNP
rs113002194 306 dbSNP
rs369271771 307 dbSNP
rs35151599 312 dbSNP
rs956437481 313 dbSNP
rs1042100887 318 dbSNP
rs1014492639 321 dbSNP
rs1210700628 322 dbSNP
rs1358028269 333 dbSNP
rs1024593639 334 dbSNP
rs970314035 342 dbSNP
rs1377106811 354 dbSNP
rs1311001396 360 dbSNP
rs58198160 377 dbSNP
rs1348339601 392 dbSNP
rs1303837137 399 dbSNP
rs577894917 407 dbSNP
rs1204294583 410 dbSNP
rs1468028559 421 dbSNP
rs1344011353 438 dbSNP
rs909551596 451 dbSNP
rs1055008664 459 dbSNP
rs900001198 462 dbSNP
rs188501002 474 dbSNP
rs997472511 481 dbSNP
rs1182300292 483 dbSNP
rs1484185130 484 dbSNP
rs564375396 485 dbSNP
rs149105627 488 dbSNP
rs1242614272 489 dbSNP
rs933841397 490 dbSNP
rs1440352101 496 dbSNP
rs1050955418 511 dbSNP
rs911109557 513 dbSNP
rs1004149861 518 dbSNP
rs1320815860 531 dbSNP
rs1313870995 532 dbSNP
rs746423847 542 dbSNP
rs1160995776 548 dbSNP
rs1362536421 552 dbSNP
rs1298153442 560 dbSNP
rs1453582789 565 dbSNP
rs942638402 566 dbSNP
rs963087055 570 dbSNP
rs974200798 572 dbSNP
rs1404729204 575 dbSNP
rs1165143529 576 dbSNP
rs1454254411 578 dbSNP
rs1425338059 585 dbSNP
rs1038970711 587 dbSNP
rs1192880628 592 dbSNP
rs904538304 596 dbSNP
rs1264707092 597 dbSNP
rs1207616111 598 dbSNP
rs1381437551 608 dbSNP
rs1487923056 613 dbSNP
rs1265669447 616 dbSNP
rs1247392444 621 dbSNP
rs1446858724 622 dbSNP
rs1309106354 634 dbSNP
rs936090657 637 dbSNP
rs1238131612 638 dbSNP
rs992033966 641 dbSNP
rs917823655 649 dbSNP
rs1386293306 654 dbSNP
rs1053650598 658 dbSNP
rs1346778663 660 dbSNP
rs1202042836 661 dbSNP
rs1391633417 662 dbSNP
rs1295534068 668 dbSNP
rs549779226 682 dbSNP
rs1169783132 693 dbSNP
rs1478101962 697 dbSNP
rs1425711385 710 dbSNP
rs143254727 714 dbSNP
rs1432124167 721 dbSNP
rs1458310091 734 dbSNP
rs1205316232 751 dbSNP
rs1042048025 765 dbSNP
rs3749538 778 dbSNP
rs1249111532 779 dbSNP
rs1281930929 780 dbSNP
rs1320549989 780 dbSNP
rs936378907 795 dbSNP
rs1038789074 798 dbSNP
rs1303557977 801 dbSNP
rs900282678 803 dbSNP
rs997021346 807 dbSNP
rs1419017656 816 dbSNP
rs1024498920 820 dbSNP
rs1465953514 831 dbSNP
rs181275199 834 dbSNP
rs1200116775 838 dbSNP
rs566281078 850 dbSNP
rs1402321099 851 dbSNP
rs1170767009 865 dbSNP
rs1001795484 866 dbSNP
rs1465527400 872 dbSNP
rs1379768173 879 dbSNP
rs1468524059 880 dbSNP
rs775985465 891 dbSNP
rs1173875744 915 dbSNP
rs1051226316 921 dbSNP
rs1179574444 925 dbSNP
rs1459391779 933 dbSNP
rs1277060725 937 dbSNP
rs1465747593 947 dbSNP
rs1346416111 958 dbSNP
rs1299369133 965 dbSNP
rs1257822837 967 dbSNP
rs1376354473 970 dbSNP
rs891363603 970 dbSNP
rs1310305421 973 dbSNP
rs1016601591 1013 dbSNP
rs1447186290 1017 dbSNP
rs879019910 1024 dbSNP
rs1004433149 1028 dbSNP
rs1331994365 1042 dbSNP
rs760930123 1044 dbSNP
rs1390750365 1045 dbSNP
rs1413834346 1049 dbSNP
rs972492367 1056 dbSNP
rs1025843588 1086 dbSNP
rs1173760796 1107 dbSNP
rs1417324499 1108 dbSNP
rs955162453 1120 dbSNP
rs986572425 1127 dbSNP
rs1441214944 1131 dbSNP
rs1015522935 1140 dbSNP
rs1187358339 1142 dbSNP
rs540011731 1144 dbSNP
rs911057244 1149 dbSNP
rs962752548 1150 dbSNP
rs1340919997 1151 dbSNP
rs34423384 1151 dbSNP
rs71598262 1151 dbSNP
rs760511865 1151 dbSNP
rs770631499 1151 dbSNP
rs564370630 1153 dbSNP
rs150656332 1161 dbSNP
rs570360942 1161 dbSNP
rs1318857675 1162 dbSNP
rs1397529776 1162 dbSNP
rs1491525858 1168 dbSNP
rs369342093 1168 dbSNP
rs979349023 1168 dbSNP
rs73854658 1170 dbSNP
rs1370655549 1174 dbSNP
rs1192100780 1176 dbSNP
rs959745298 1178 dbSNP
rs531551797 1180 dbSNP
rs1263994430 1183 dbSNP
rs1218961601 1184 dbSNP
rs1450025794 1187 dbSNP
rs1480328823 1189 dbSNP
rs936030801 1199 dbSNP
rs1053139462 1217 dbSNP
rs1210987806 1226 dbSNP
rs1356810157 1228 dbSNP
rs1294951352 1229 dbSNP
rs1270072367 1233 dbSNP
rs891854202 1236 dbSNP
rs991981189 1239 dbSNP
rs950168376 1240 dbSNP
rs555777715 1245 dbSNP
rs1045899370 1248 dbSNP
rs1428232781 1250 dbSNP
rs1477948909 1256 dbSNP
rs1405644865 1260 dbSNP
rs966594660 1269 dbSNP
rs768940896 1270 dbSNP
rs114031474 1285 dbSNP
rs186252988 1286 dbSNP
rs1195853119 1287 dbSNP
rs1367333939 1293 dbSNP
rs1402936013 1303 dbSNP
rs1477099593 1307 dbSNP
rs1282414336 1309 dbSNP
rs1453577960 1313 dbSNP
rs1340826868 1318 dbSNP
rs936342218 1325 dbSNP
rs1001785694 1333 dbSNP
rs190720710 1342 dbSNP
rs1017221689 1343 dbSNP
rs1278805720 1359 dbSNP
rs1215770180 1373 dbSNP
rs1273773657 1381 dbSNP
rs1364848574 1381 dbSNP
rs1372801251 1382 dbSNP
rs1436746434 1382 dbSNP
rs1465436662 1382 dbSNP
rs5863039 1382 dbSNP
rs796172675 1382 dbSNP
rs1401609433 1383 dbSNP
rs1173190873 1384 dbSNP
rs1413310950 1387 dbSNP
rs921683447 1388 dbSNP
rs1479120230 1389 dbSNP
rs1236588505 1392 dbSNP
rs201173892 1392 dbSNP
rs202032400 1393 dbSNP
rs77897125 1393 dbSNP
rs1206502344 1394 dbSNP
rs1258526337 1394 dbSNP
rs73854659 1394 dbSNP
rs1310440622 1395 dbSNP
rs1294674731 1396 dbSNP
rs1219320737 1399 dbSNP
rs564108004 1404 dbSNP
rs1306669440 1405 dbSNP
rs994208955 1405 dbSNP
rs1264349048 1406 dbSNP
rs200465789 1406 dbSNP
rs1378075632 1410 dbSNP
rs1025326369 1428 dbSNP
rs1446452118 1433 dbSNP
rs543828933 1435 dbSNP
rs1489450282 1461 dbSNP
rs1436698671 1465 dbSNP
rs80338641 1470 dbSNP
rs1158255544 1472 dbSNP
rs986518472 1473 dbSNP
rs1416921060 1487 dbSNP
rs1037240411 1494 dbSNP
rs1427447760 1507 dbSNP
rs1018053269 1510 dbSNP
rs543345696 1513 dbSNP
rs1386500523 1514 dbSNP
rs1236836920 1515 dbSNP
rs77441298 1515 dbSNP
rs1422675243 1516 dbSNP
rs1283321916 1520 dbSNP
rs1349447856 1520 dbSNP
rs979298263 1525 dbSNP
rs1360959014 1527 dbSNP
rs1354051294 1530 dbSNP
rs750482135 1535 dbSNP
rs1226976481 1538 dbSNP
rs925165103 1545 dbSNP
rs1303958418 1551 dbSNP
rs1417221198 1600 dbSNP
rs775168783 1602 dbSNP
rs1297738064 1609 dbSNP
rs369789031 1610 dbSNP
rs762459813 1614 dbSNP
rs1365776312 1616 dbSNP
rs1160938017 1628 dbSNP
rs913242910 1628 dbSNP
rs1421866328 1630 dbSNP
rs1317267571 1631 dbSNP
rs1188540286 1632 dbSNP
rs1486634536 1635 dbSNP
rs528847369 1637 dbSNP
rs1245924193 1642 dbSNP
rs1287305426 1648 dbSNP
rs560331795 1650 dbSNP
rs759511141 1681 dbSNP
rs927428466 1682 dbSNP
rs559458360 1685 dbSNP
rs1219765794 1689 dbSNP
rs1321475722 1695 dbSNP
rs151238468 1713 dbSNP
rs1214049022 1721 dbSNP
rs1277583810 1734 dbSNP
rs373554949 1737 dbSNP
rs1038547271 1739 dbSNP
rs767352887 1745 dbSNP
rs1485349100 1752 dbSNP
rs1387361371 1789 dbSNP
rs1292024191 1792 dbSNP
rs974420216 1796 dbSNP
rs1349059285 1811 dbSNP
rs994432411 1816 dbSNP
rs551977577 1819 dbSNP
rs921606561 1828 dbSNP
rs561809390 1839 dbSNP
rs1192215350 1847 dbSNP
rs1428620657 1848 dbSNP
rs184166015 1865 dbSNP
rs1207670664 1873 dbSNP
rs1487994774 1878 dbSNP
rs1244478804 1881 dbSNP
rs1215960492 1883 dbSNP
rs755798566 1885 dbSNP
rs1219273803 1890 dbSNP
rs940192371 1890 dbSNP
rs1162911664 1891 dbSNP
rs537788661 1905 dbSNP
rs1018000737 1908 dbSNP
rs898735937 1910 dbSNP
rs931571190 1912 dbSNP
rs1055110506 1920 dbSNP
rs1462821660 1928 dbSNP
rs963779167 1929 dbSNP
rs527630696 1937 dbSNP
rs1466747056 1941 dbSNP
rs895141186 1942 dbSNP
rs1338894645 1944 dbSNP
rs1013642282 1954 dbSNP
rs1380698896 1967 dbSNP
rs1451977021 1968 dbSNP
rs763953023 1980 dbSNP
rs1253247831 1987 dbSNP
rs1025055531 1988 dbSNP
rs140508302 1991 dbSNP
rs80336903 2007 dbSNP
rs138387788 2013 dbSNP
rs1342161150 2015 dbSNP
rs1254319250 2020 dbSNP
rs1232641439 2024 dbSNP
rs957951129 2032 dbSNP
rs1305934779 2037 dbSNP
rs1444907023 2043 dbSNP
rs756945401 2044 dbSNP
rs1330505329 2047 dbSNP
rs1264597108 2051 dbSNP
rs1398568078 2051 dbSNP
rs1170228194 2054 dbSNP
rs1465138330 2070 dbSNP
rs1459624556 2077 dbSNP
rs1395261984 2079 dbSNP
rs913221395 2084 dbSNP
rs545901652 2087 dbSNP
rs111310423 2088 dbSNP
rs907613777 2103 dbSNP
rs1254690349 2118 dbSNP
rs1175337630 2133 dbSNP
rs745362782 2136 dbSNP
rs144045281 2137 dbSNP
rs920107079 2144 dbSNP
rs927333319 2145 dbSNP
rs1239513951 2146 dbSNP
rs1337423887 2147 dbSNP
rs1332143939 2150 dbSNP
rs1404141842 2151 dbSNP
rs187070610 2169 dbSNP
rs1332109623 2180 dbSNP
rs1375483828 2189 dbSNP
rs1055794192 2195 dbSNP
rs1038904970 2217 dbSNP
rs1356287922 2221 dbSNP
rs1379316146 2260 dbSNP
rs1159441266 2265 dbSNP
rs1471378343 2271 dbSNP
rs1367183250 2275 dbSNP
rs1440690844 2279 dbSNP
rs1187425323 2280 dbSNP
rs1475859747 2301 dbSNP
rs1214561766 2306 dbSNP
rs368831464 2306 dbSNP
rs1368808631 2307 dbSNP
rs949362258 2315 dbSNP
rs1046456028 2317 dbSNP
rs930210158 2328 dbSNP
rs538755865 2330 dbSNP
rs1047345739 2332 dbSNP
rs890771571 2333 dbSNP
rs759028089 2343 dbSNP
rs1294529392 2347 dbSNP
rs1202581448 2359 dbSNP
rs1359456830 2365 dbSNP
rs557975375 2368 dbSNP
rs893631030 2369 dbSNP
rs1039365390 2370 dbSNP
rs996071773 2371 dbSNP
rs1291783971 2374 dbSNP
rs750967635 2378 dbSNP
rs1475787727 2383 dbSNP
rs1202380417 2386 dbSNP
rs1232209563 2391 dbSNP
rs146723676 2399 dbSNP
rs1480662668 2410 dbSNP
rs1477551293 2412 dbSNP
rs1195550807 2414 dbSNP
rs1242828968 2414 dbSNP
rs1450153057 2417 dbSNP
rs1201310434 2422 dbSNP
rs1000581622 2425 dbSNP
rs954653384 2427 dbSNP
rs1212847937 2438 dbSNP
rs1335321718 2439 dbSNP
rs1275006854 2444 dbSNP
rs1216196972 2447 dbSNP
rs1360631498 2465 dbSNP
rs1270339068 2472 dbSNP
rs1008505834 2475 dbSNP
rs1427532955 2486 dbSNP
rs780371648 2490 dbSNP
rs1325572620 2514 dbSNP
rs80115527 2518 dbSNP
rs1009879984 2527 dbSNP
rs1062835 2528 dbSNP
rs970646411 2532 dbSNP
rs1465601079 2537 dbSNP
rs920072273 2539 dbSNP
rs1169782849 2541 dbSNP
rs1408257223 2554 dbSNP
rs1477127979 2555 dbSNP
rs776936753 2569 dbSNP
rs1328828863 2570 dbSNP
rs548110510 2580 dbSNP
rs149421886 2583 dbSNP
rs541063475 2599 dbSNP
rs1254710526 2600 dbSNP
rs1196641043 2604 dbSNP
rs991042923 2605 dbSNP
rs559369079 2606 dbSNP
rs1222553836 2608 dbSNP
rs1342391626 2616 dbSNP
rs1270360588 2629 dbSNP
rs143884249 2630 dbSNP
rs1441245629 2644 dbSNP
rs1373612952 2648 dbSNP
rs1046401352 2651 dbSNP
rs923954122 2653 dbSNP
rs1272283696 2664 dbSNP
rs1355634722 2672 dbSNP
rs974218874 2673 dbSNP
rs544767811 2708 dbSNP
rs1490489307 2738 dbSNP
rs1412868504 2739 dbSNP
rs148181277 2750 dbSNP
rs1266548453 2754 dbSNP
rs1054286129 2763 dbSNP
rs1455777323 2796 dbSNP
rs1396649910 2797 dbSNP
rs569726808 2798 dbSNP
rs1176560689 2799 dbSNP
rs1480230811 2824 dbSNP
rs1233417903 2829 dbSNP
rs930181057 2851 dbSNP
rs1440178642 2862 dbSNP
rs1490111372 2862 dbSNP
rs1279044516 2867 dbSNP
rs530958868 2868 dbSNP
rs912784152 2869 dbSNP
rs1307451921 2876 dbSNP
rs893923022 2886 dbSNP
rs944298431 2887 dbSNP
rs1300442690 2888 dbSNP
rs1446525704 2891 dbSNP
rs1474507788 2899 dbSNP
rs1039313145 2905 dbSNP
rs549670667 2910 dbSNP
rs1385884410 2913 dbSNP
rs567582725 2926 dbSNP
rs1436756887 2932 dbSNP
rs749186373 2933 dbSNP
rs1358867531 2934 dbSNP
rs190561534 2935 dbSNP
rs1418310758 2936 dbSNP
rs1408507285 2939 dbSNP
rs1008790180 2941 dbSNP
rs1471809614 2942 dbSNP
rs536792745 2946 dbSNP
rs546637829 2947 dbSNP
rs1053564503 2955 dbSNP
rs892282488 2956 dbSNP
rs1486407642 2958 dbSNP
rs1283474513 2959 dbSNP
rs1215456467 2971 dbSNP
rs1009374564 2973 dbSNP
rs76036887 2979 dbSNP
rs1227100003 2981 dbSNP
rs1318607715 2982 dbSNP
rs906408603 2988 dbSNP
rs9631758 3020 dbSNP
rs1027814457 3025 dbSNP
rs372519052 3025 dbSNP
rs958505388 3025 dbSNP
rs1288491321 3033 dbSNP
rs1359450820 3049 dbSNP
rs369676841 3052 dbSNP
rs1248110782 3053 dbSNP
rs1161097904 3062 dbSNP
rs958731722 3079 dbSNP
rs974542763 3080 dbSNP
rs77071040 3086 dbSNP
rs1187992109 3108 dbSNP
rs760539814 3111 dbSNP
rs1023821894 3113 dbSNP
rs1475913637 3120 dbSNP
rs1259115288 3121 dbSNP
rs1205500798 3126 dbSNP
rs951558256 3128 dbSNP
rs1445513962 3130 dbSNP
rs1219833248 3131 dbSNP
rs1334725720 3137 dbSNP
rs1274376805 3147 dbSNP
rs1235733239 3154 dbSNP
rs534340443 3163 dbSNP
rs982933443 3165 dbSNP
rs1338486336 3175 dbSNP
rs982362427 3188 dbSNP
rs1290342486 3189 dbSNP
rs1382979914 3189 dbSNP
rs912739652 3198 dbSNP
rs1393573553 3204 dbSNP
rs1165533682 3213 dbSNP
rs763841988 3216 dbSNP
rs758509481 3235 dbSNP
rs753652518 3245 dbSNP
rs1243853414 3254 dbSNP
rs1446466292 3257 dbSNP
rs975678810 3258 dbSNP
rs569855316 3259 dbSNP
rs920911651 3261 dbSNP
rs1263447223 3265 dbSNP
rs1454692482 3268 dbSNP
rs1160641392 3279 dbSNP
rs936379747 3285 dbSNP
rs115250313 3286 dbSNP
rs892193275 3289 dbSNP
rs758285055 3290 dbSNP
rs932099335 3298 dbSNP
rs1050196102 3308 dbSNP
rs1046229259 3314 dbSNP
rs1319412713 3320 dbSNP
rs944593567 3324 dbSNP
rs1382947971 3327 dbSNP
rs1036229081 3332 dbSNP
rs146225563 3338 dbSNP
rs1369932340 3347 dbSNP
rs1002119371 3359 dbSNP
rs1442993614 3361 dbSNP
rs1394264807 3366 dbSNP
rs1297067846 3370 dbSNP
rs73854660 3372 dbSNP
rs541328348 3373 dbSNP
rs894451869 3380 dbSNP
rs1027351340 3384 dbSNP
rs1171331323 3386 dbSNP
rs1453495475 3393 dbSNP
rs1396060845 3407 dbSNP
rs1195914330 3409 dbSNP
rs894186822 3410 dbSNP
rs1381933792 3426 dbSNP
rs1196403428 3434 dbSNP
rs1481644336 3435 dbSNP
rs995489411 3447 dbSNP
rs114936310 3461 dbSNP
rs1262279746 3464 dbSNP
rs951464163 3476 dbSNP
rs1348230462 3485 dbSNP
rs970891708 3487 dbSNP
rs1306178607 3504 dbSNP
rs1004290893 3509 dbSNP
rs796506183 3520 dbSNP
rs1204793558 3521 dbSNP
rs867042400 3522 dbSNP
rs1486594858 3525 dbSNP
rs1031253809 3526 dbSNP
rs957008801 3536 dbSNP
rs1181818662 3539 dbSNP
rs1375686850 3549 dbSNP
rs182740301 3550 dbSNP
rs1468941915 3552 dbSNP
rs749963848 3554 dbSNP
rs915265234 3566 dbSNP
rs1421464969 3570 dbSNP
rs1420217442 3576 dbSNP
rs1184516639 3581 dbSNP
rs932021248 3583 dbSNP
rs1210272666 3588 dbSNP
rs1362453849 3592 dbSNP
rs757785227 3598 dbSNP
rs975623509 3603 dbSNP
rs921488197 3608 dbSNP
rs958551888 3615 dbSNP
rs989120034 3621 dbSNP
rs1282768187 3623 dbSNP
rs1203662882 3627 dbSNP
rs545088294 3627 dbSNP
rs1259999276 3636 dbSNP
rs1239666564 3643 dbSNP
rs139195086 3644 dbSNP
rs1290836939 3649 dbSNP
rs912012101 3655 dbSNP
rs1334140484 3657 dbSNP
rs1314305787 3660 dbSNP
rs945137948 3672 dbSNP
rs1391929293 3678 dbSNP
rs1384692364 3679 dbSNP
rs1159565144 3683 dbSNP
rs1036176528 3692 dbSNP
rs1046219468 3713 dbSNP
rs1187251600 3716 dbSNP
rs927761391 3727 dbSNP
rs1259751407 3728 dbSNP
rs1191300305 3732 dbSNP
rs1256568531 3738 dbSNP
rs531150005 3748 dbSNP
rs930589847 3751 dbSNP
rs1049181403 3753 dbSNP
rs1331090227 3761 dbSNP
rs1284240424 3763 dbSNP
rs1232649011 3764 dbSNP
rs554912691 3769 dbSNP
rs1428199592 3782 dbSNP
rs1201940517 3784 dbSNP
rs1054976401 3786 dbSNP
rs1262594546 3792 dbSNP
rs1480977553 3796 dbSNP
rs1198132567 3804 dbSNP
rs1248995593 3805 dbSNP
rs187025024 3807 dbSNP
rs1437683563 3813 dbSNP
rs938424694 3814 dbSNP
rs1024050533 3816 dbSNP
rs995172252 3827 dbSNP
rs1048384116 3829 dbSNP
rs1166246652 3834 dbSNP
rs906988284 3840 dbSNP
rs1242949626 3849 dbSNP
rs887148848 3864 dbSNP
rs1193568075 3866 dbSNP
rs879938748 3876 dbSNP
rs1250949243 3877 dbSNP
rs1004238447 3879 dbSNP
rs1173768087 3900 dbSNP
rs1468904221 3902 dbSNP
rs1291328234 3904 dbSNP
rs1376601363 3911 dbSNP
rs1212298720 3914 dbSNP
rs1031184463 3916 dbSNP
rs957155635 3919 dbSNP
rs561145404 3926 dbSNP
rs1019686466 3928 dbSNP
rs965447692 3930 dbSNP
rs1056960691 3933 dbSNP
rs953398054 3938 dbSNP
rs996948022 3941 dbSNP
rs986133976 3942 dbSNP
rs528801296 3949 dbSNP
rs1452876219 3951 dbSNP
rs371105826 3955 dbSNP
rs990172403 3963 dbSNP
rs1192786448 3966 dbSNP
rs966127265 3970 dbSNP
rs200422575 3984 dbSNP
rs1248415787 3985 dbSNP
rs1491454942 3987 dbSNP
rs111630691 3988 dbSNP
rs1370303935 3988 dbSNP
rs1491516338 3988 dbSNP
rs200275673 3988 dbSNP
rs398064153 3988 dbSNP
rs578244445 3988 dbSNP
rs71598263 3988 dbSNP
rs796423666 3988 dbSNP
rs1278268158 3989 dbSNP
rs1309996677 3990 dbSNP
rs1355179562 3990 dbSNP
rs1433028847 4000 dbSNP
rs199958354 4001 dbSNP
rs1172740221 4002 dbSNP
rs1221946253 4005 dbSNP
rs1393847385 4006 dbSNP
rs894309227 4011 dbSNP
rs1229698478 4016 dbSNP
rs1250185554 4017 dbSNP
rs1483024242 4018 dbSNP
rs1469617749 4029 dbSNP
rs1232896981 4033 dbSNP
rs1183725562 4035 dbSNP
rs1223794839 4043 dbSNP
rs571313365 4045 dbSNP
rs1279193914 4047 dbSNP
rs930516039 4052 dbSNP
rs1048978342 4063 dbSNP
rs915846497 4064 dbSNP
rs1271540158 4065 dbSNP
rs1223699350 4072 dbSNP
rs1489949017 4079 dbSNP
rs532374807 4082 dbSNP
rs948363483 4087 dbSNP
rs1413044758 4089 dbSNP
rs1355003113 4095 dbSNP
rs913565311 4103 dbSNP
rs1467833961 4109 dbSNP
rs966801395 4110 dbSNP
rs1171886218 4113 dbSNP
rs777917708 4114 dbSNP
rs1182804404 4116 dbSNP
rs1429031573 4118 dbSNP
rs927667992 4118 dbSNP
rs1331429986 4125 dbSNP
rs1399974696 4130 dbSNP
rs937760884 4141 dbSNP
rs751253790 4144 dbSNP
rs1054925492 4153 dbSNP
rs1473928967 4155 dbSNP
rs906924532 4168 dbSNP
rs551069175 4171 dbSNP
rs930576821 4172 dbSNP
rs998625075 4175 dbSNP
rs1048134207 4178 dbSNP
rs1215524372 4187 dbSNP
rs1052995520 4191 dbSNP
rs1318004722 4194 dbSNP
rs537012411 4195 dbSNP
rs1402840366 4198 dbSNP
rs887101978 4199 dbSNP
rs1334248430 4200 dbSNP
rs1011525823 4207 dbSNP
rs1365749104 4210 dbSNP
rs73854661 4210 dbSNP
rs1041043512 4214 dbSNP
rs77877975 4215 dbSNP
rs1384081794 4235 dbSNP
rs1007503230 4242 dbSNP
rs1389173331 4243 dbSNP
rs996892704 4249 dbSNP
rs1459867918 4250 dbSNP
rs966077104 4255 dbSNP
rs1028482458 4264 dbSNP
rs972177348 4271 dbSNP
rs919048878 4273 dbSNP
rs73854662 4274 dbSNP
rs1186244179 4277 dbSNP
rs1465611868 4280 dbSNP
rs1250334130 4281 dbSNP
rs1011139300 4287 dbSNP
rs985067515 4290 dbSNP
rs564204409 4294 dbSNP
rs1021652429 4297 dbSNP
rs567457469 4300 dbSNP
rs1294564805 4312 dbSNP
rs1357787143 4316 dbSNP
rs966962682 4320 dbSNP
rs1322360202 4322 dbSNP
rs1264548562 4335 dbSNP
rs1393644833 4344 dbSNP
rs1293561164 4352 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' guguuuaagccUAGAUGUCCCAu 5'
                     || |||||||| 
Target 5' uccacuacuaaAUAUACAGGGUa 3'
3 - 25
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 23321.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' guguuuaagccUAGAUGUCCCAu 5'
                     || |||||||| 
Target 5' uccacuacuaaAUAUACAGGGUa 3'
3 - 25
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000338700.5 | 3UTR | CUUCCACUACUAAAUAUACAGGGUAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000338700.5 | 3UTR | CUUCCACUACUAAAUAUACAGGGUAUGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE19783 ER- ER- breast cancer -0.34 1.1e-3 -0.313 2.5e-3 79 Click to see details
GSE14794 Lymphoblastoid cells 0.307 1.6e-3 0.383 9.7e-5 90 Click to see details
GSE19536 Breast cancer -0.244 7.2e-3 -0.202 2.2e-2 100 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.472 1.8e-2 0.492 1.4e-2 20 Click to see details
GSE28544 Breast cancer -0.422 2.0e-2 -0.495 7.0e-3 24 Click to see details
GSE21032 Prostate cancer 0.194 3.9e-2 0.203 3.3e-2 83 Click to see details
GSE26953 Aortic valvular endothelial cells 0.287 8.7e-2 0.255 1.1e-1 24 Click to see details
GSE27834 Pluripotent stem cells -0.305 1.3e-1 -0.303 1.3e-1 16 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.221 1.4e-1 0.293 7.8e-2 25 Click to see details
GSE19350 CNS germ cell tumors 0.316 1.6e-1 0.259 2.1e-1 12 Click to see details
GSE17498 Multiple myeloma -0.134 2.0e-1 -0.055 3.7e-1 40 Click to see details
GSE19783 ER+ ER+ breast cancer 0.18 2.2e-1 0.180 2.2e-1 20 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.103 3.1e-1 -0.197 1.7e-1 25 Click to see details
GSE42095 Differentiated embryonic stem cells -0.093 3.4e-1 0.018 4.7e-1 23 Click to see details
GSE17306 Multiple myeloma -0.061 3.4e-1 0.032 4.1e-1 49 Click to see details
GSE32688 Pancreatic cancer 0.074 3.4e-1 0.080 3.3e-1 32 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.152 3.6e-1 0.190 3.3e-1 8 Click to see details
GSE28260 Renal cortex and medulla -0.058 4.3e-1 0.016 4.8e-1 13 Click to see details
GSE21687 Ependynoma primary tumors 0.019 4.4e-1 -0.132 1.5e-1 64 Click to see details
GSE38226 Liver fibrosis 0.005 4.9e-1 0.085 3.6e-1 21 Click to see details
GSE38226 Liver fibrosis 0.005 4.9e-1 0.085 3.6e-1 21 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KIRC 0.425 0 0.386 0 68 Click to see details
KIRP 0.566 0 0.549 0 32 Click to see details
BRCA -0.256 0.01 -0.195 0.04 84 Click to see details
THCA 0.181 0.09 0.220 0.05 59 Click to see details
KICH 0.261 0.1 0.336 0.05 25 Click to see details
ESCA -0.403 0.11 -0.464 0.08 11 Click to see details
STAD 0.166 0.18 0.086 0.32 32 Click to see details
PRAD 0.13 0.18 0.065 0.33 50 Click to see details
CESC 0.827 0.19 1.000 0.5 3 Click to see details
PCPG -0.725 0.24 -0.500 0.33 3 Click to see details
BLCA 0.175 0.24 0.098 0.35 18 Click to see details
LUAD -0.171 0.3 -0.154 0.32 12 Click to see details
COAD 0.15 0.36 0.095 0.41 8 Click to see details
LUSC 0.037 0.41 0.010 0.48 38 Click to see details
PAAD -0.163 0.42 0.400 0.3 4 Click to see details
UCEC -0.044 0.43 -0.075 0.38 19 Click to see details
HNSC 0.01 0.47 0.051 0.37 42 Click to see details
LIHC 0.001 0.5 -0.067 0.32 49 Click to see details
CHOL 0.001 0.5 -0.100 0.4 9 Click to see details
CHOL 0.001 0.5 -0.100 0.4 9 Click to see details
CHOL 0.001 0.5 -0.100 0.4 9 Click to see details
449 hsa-miR-10a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT001140 HOXA1 homeobox A1 4 3
MIRT003896 USF2 upstream transcription factor 2, c-fos interacting 4 1
MIRT005454 NCOR2 nuclear receptor corepressor 2 3 1
MIRT005509 MAP3K7 mitogen-activated protein kinase kinase kinase 7 5 1
MIRT005510 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 7 2
MIRT006536 SRSF1 serine and arginine rich splicing factor 1 1 1
MIRT006537 TRA2B transformer 2 beta homolog 3 3
MIRT006972 EPHA4 EPH receptor A4 4 2
MIRT007021 CHL1 cell adhesion molecule L1 like 1 1
MIRT025588 GPR63 G protein-coupled receptor 63 1 1
MIRT025589 BCL2L13 BCL2 like 13 1 1
MIRT025590 CREB5 cAMP responsive element binding protein 5 1 1
MIRT025591 BIRC5 baculoviral IAP repeat containing 5 1 1
MIRT025592 OMA1 OMA1 zinc metallopeptidase 1 1
MIRT025593 IER3IP1 immediate early response 3 interacting protein 1 1 1
MIRT025594 RBM17 RNA binding motif protein 17 1 1
MIRT025595 NR1D2 nuclear receptor subfamily 1 group D member 2 1 1
MIRT025596 BAMBI BMP and activin membrane bound inhibitor 1 1
MIRT025597 SNX4 sorting nexin 4 2 4
MIRT025598 SERBP1 SERPINE1 mRNA binding protein 1 1 2
MIRT025599 LHFPL4 LHFPL tetraspan subfamily member 4 1 1
MIRT025600 NOP16 NOP16 nucleolar protein 1 1
MIRT025601 AJUBA ajuba LIM protein 1 1
MIRT025602 MAPK8 mitogen-activated protein kinase 8 1 1
MIRT025603 ZBTB10 zinc finger and BTB domain containing 10 1 1
MIRT025604 TMEM101 transmembrane protein 101 2 4
MIRT025605 YES1 YES proto-oncogene 1, Src family tyrosine kinase 1 1
MIRT025606 DUSP3 dual specificity phosphatase 3 1 1
MIRT025607 PANX1 pannexin 1 1 1
MIRT025608 WEE1 WEE1 G2 checkpoint kinase 1 1
MIRT025609 TLE3 transducin like enhancer of split 3 1 1
MIRT025610 PDPK1 3-phosphoinositide dependent protein kinase 1 1 1
MIRT025611 CMPK1 cytidine/uridine monophosphate kinase 1 2 6
MIRT025612 NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 1 1
MIRT025613 ARPC5 actin related protein 2/3 complex subunit 5 1 1
MIRT025614 PUM2 pumilio RNA binding family member 2 1 1
MIRT025615 GATAD2A GATA zinc finger domain containing 2A 1 1
MIRT025616 ACVR2A activin A receptor type 2A 2 2
MIRT025617 RBM12B RNA binding motif protein 12B 2 5
MIRT025618 THUMPD1 THUMP domain containing 1 1 2
MIRT025619 BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 1 1
MIRT025620 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT025621 XRN1 5'-3' exoribonuclease 1 1 1
MIRT025622 E2F7 E2F transcription factor 7 1 1
MIRT025623 LCA5 LCA5, lebercilin 1 1
MIRT025624 ELOVL2 ELOVL fatty acid elongase 2 1 1
MIRT025625 TFAP2C transcription factor AP-2 gamma 2 3
MIRT025626 TRIM2 tripartite motif containing 2 2 4
MIRT025627 HOXB3 homeobox B3 2 5
MIRT047505 FUS FUS RNA binding protein 1 1
MIRT047506 LMBR1L limb development membrane protein 1 like 1 1
MIRT047507 HSP90AA1 heat shock protein 90 alpha family class A member 1 1 1
MIRT047508 SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 1 1
MIRT047509 EXTL3 exostosin like glycosyltransferase 3 1 1
MIRT047510 POLR2A RNA polymerase II subunit A 1 1
MIRT047511 RIOK2 RIO kinase 2 1 1
MIRT047512 C12orf76 chromosome 12 open reading frame 76 1 1
MIRT047513 CCDC151 coiled-coil domain containing 151 1 1
MIRT047514 FAT2 FAT atypical cadherin 2 1 1
MIRT047515 TPI1 triosephosphate isomerase 1 1 1
MIRT047516 BTAF1 B-TFIID TATA-box binding protein associated factor 1 1 1
MIRT047517 MSANTD1 Myb/SANT DNA binding domain containing 1 1 1
MIRT047518 PLA2G4A phospholipase A2 group IVA 1 1
MIRT047519 IGSF1 immunoglobulin superfamily member 1 1 1
MIRT047520 LEMD3 LEM domain containing 3 1 1
MIRT047521 E2F1 E2F transcription factor 1 1 1
MIRT047522 KIF3B kinesin family member 3B 1 1
MIRT047523 GBAS nipsnap homolog 2 1 1
MIRT047524 LIMA1 LIM domain and actin binding 1 1 1
MIRT047525 HSPA4 heat shock protein family A (Hsp70) member 4 1 1
MIRT047526 MRC2 mannose receptor C type 2 1 1
MIRT047527 TMEM106B transmembrane protein 106B 1 1
MIRT047528 ZFP30 ZFP30 zinc finger protein 1 1
MIRT047529 AMPD1 adenosine monophosphate deaminase 1 1 1
MIRT047530 SLC2A3 solute carrier family 2 member 3 1 1
MIRT047531 RPL15 ribosomal protein L15 1 1
MIRT047532 AGER advanced glycosylation end-product specific receptor 1 1
MIRT047533 CNTLN centlein 1 1
MIRT047534 C21orf59 chromosome 21 open reading frame 59 1 1
MIRT047535 SEPT9 septin 9 1 1
MIRT047536 COL6A2 collagen type VI alpha 2 chain 1 1
MIRT047537 MLNR motilin receptor 1 1
MIRT047538 RTKN2 rhotekin 2 1 1
MIRT047539 OAZ1 ornithine decarboxylase antizyme 1 1 1
MIRT047540 CSNK2A1 casein kinase 2 alpha 1 2 3
MIRT047541 AQP12B aquaporin 12B 1 1
MIRT047542 AGBL2 ATP/GTP binding protein like 2 1 1
MIRT047543 GOLGA8A golgin A8 family member A 1 1
MIRT047544 CPED1 cadherin like and PC-esterase domain containing 1 1 1
MIRT047545 HSPA8 heat shock protein family A (Hsp70) member 8 1 1
MIRT047546 SLC41A3 solute carrier family 41 member 3 1 1
MIRT047547 KXD1 KxDL motif containing 1 1 1
MIRT047548 RELN reelin 1 1
MIRT047549 SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 1 1
MIRT047550 PTPRT protein tyrosine phosphatase, receptor type T 1 1
MIRT047551 ZC3H18 zinc finger CCCH-type containing 18 1 1
MIRT047552 CYP8B1 cytochrome P450 family 8 subfamily B member 1 1 1
MIRT047553 COL4A3 collagen type IV alpha 3 chain 1 1
MIRT047554 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT047555 MSL3 MSL complex subunit 3 1 1
MIRT047556 TTC7A tetratricopeptide repeat domain 7A 1 1
MIRT047557 COX7B cytochrome c oxidase subunit 7B 1 1
MIRT047558 ZNF318 zinc finger protein 318 1 1
MIRT047559 ACAA1 acetyl-CoA acyltransferase 1 1 1
MIRT047560 IPCEF1 interaction protein for cytohesin exchange factors 1 1 1
MIRT047561 SCAP SREBF chaperone 1 1
MIRT047562 KCTD11 potassium channel tetramerization domain containing 11 2 11
MIRT047563 RIOK3 RIO kinase 3 1 1
MIRT047564 C5 complement C5 1 1
MIRT047565 GLB1L3 galactosidase beta 1 like 3 1 1
MIRT047566 PAPD5 poly(A) RNA polymerase D5, non-canonical 1 1
MIRT047567 RNF123 ring finger protein 123 1 1
MIRT047568 ZNF629 zinc finger protein 629 1 1
MIRT047569 AMMECR1L AMMECR1 like 1 1
MIRT047570 KLHL6 kelch like family member 6 1 1
MIRT047571 SYMPK symplekin 1 1
MIRT047572 NCSTN nicastrin 1 1
MIRT047573 GALNT1 polypeptide N-acetylgalactosaminyltransferase 1 1 1
MIRT047574 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT047575 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 1 1
MIRT047576 RAB18 RAB18, member RAS oncogene family 1 1
MIRT047577 CUL3 cullin 3 1 1
MIRT047578 MTF2 metal response element binding transcription factor 2 1 1
MIRT047579 ORAI2 ORAI calcium release-activated calcium modulator 2 1 1
MIRT047580 NUP37 nucleoporin 37 1 1
MIRT047581 GPR98 adhesion G protein-coupled receptor V1 1 1
MIRT047582 RUNDC3B RUN domain containing 3B 1 1
MIRT047583 KIF21A kinesin family member 21A 1 1
MIRT047584 FEM1B fem-1 homolog B 1 1
MIRT047585 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT047586 PLA2G4F phospholipase A2 group IVF 1 1
MIRT047587 SNTB2 syntrophin beta 2 1 1
MIRT047588 NUB1 negative regulator of ubiquitin like proteins 1 1 1
MIRT047589 MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 1 1
MIRT047590 DNAJB1 DnaJ heat shock protein family (Hsp40) member B1 1 1
MIRT047591 C11orf63 chromosome 11 open reading frame 63 1 1
MIRT047592 ABCB7 ATP binding cassette subfamily B member 7 1 1
MIRT047593 CHRNA5 cholinergic receptor nicotinic alpha 5 subunit 1 1
MIRT047594 RPS9 ribosomal protein S9 1 1
MIRT047595 DDX42 DEAD-box helicase 42 1 1
MIRT047596 XPO7 exportin 7 1 1
MIRT047597 PYGL glycogen phosphorylase L 1 1
MIRT047598 TGFB3 transforming growth factor beta 3 1 1
MIRT047599 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT047600 PHB2 prohibitin 2 1 1
MIRT047601 ALDH1A2 aldehyde dehydrogenase 1 family member A2 1 1
MIRT047602 SLC3A2 solute carrier family 3 member 2 1 1
MIRT047603 POLR2H RNA polymerase II subunit H 1 1
MIRT047604 TAF15 TATA-box binding protein associated factor 15 1 1
MIRT047605 MOB3C MOB kinase activator 3C 1 1
MIRT047606 MBD1 methyl-CpG binding domain protein 1 1 1
MIRT047607 HSPA1B heat shock protein family A (Hsp70) member 1B 1 1
MIRT047608 INTS2 integrator complex subunit 2 1 1
MIRT047609 MYEF2 myelin expression factor 2 1 1
MIRT047610 PANK2 pantothenate kinase 2 1 1
MIRT047611 EMB embigin 1 1
MIRT047612 HK1 hexokinase 1 1 1
MIRT047613 UBE2Z ubiquitin conjugating enzyme E2 Z 1 1
MIRT047614 STT3A STT3A, catalytic subunit of the oligosaccharyltransferase complex 1 1
MIRT047615 HOXA3 homeobox A3 1 1
MIRT047616 NT5DC1 5'-nucleotidase domain containing 1 1 1
MIRT047617 YOD1 YOD1 deubiquitinase 1 1
MIRT047618 APRT adenine phosphoribosyltransferase 1 1
MIRT047619 C2CD2 C2 calcium dependent domain containing 2 1 1
MIRT047620 SHBG sex hormone binding globulin 1 1
MIRT047621 PPP1R12A protein phosphatase 1 regulatory subunit 12A 1 1
MIRT047622 SCD stearoyl-CoA desaturase 1 1
MIRT047623 BCKDK branched chain ketoacid dehydrogenase kinase 1 1
MIRT047624 ETS1 ETS proto-oncogene 1, transcription factor 1 1
MIRT047625 GTF3C2 general transcription factor IIIC subunit 2 1 1
MIRT047626 NOP2 NOP2 nucleolar protein 1 1
MIRT047627 RPS29 ribosomal protein S29 1 1
MIRT047628 LAMC1 laminin subunit gamma 1 1 1
MIRT047629 GNAL G protein subunit alpha L 1 1
MIRT047630 KIAA1147 KIAA1147 1 1
MIRT047631 NACC2 NACC family member 2 1 1
MIRT047632 TMEM179B transmembrane protein 179B 1 1
MIRT047633 ARF3 ADP ribosylation factor 3 1 1
MIRT047634 MCPH1 microcephalin 1 1 1
MIRT047635 ARMCX3 armadillo repeat containing, X-linked 3 1 1
MIRT047636 UBN2 ubinuclein 2 1 1
MIRT047637 ANO6 anoctamin 6 1 1
MIRT047638 NEK7 NIMA related kinase 7 1 1
MIRT047639 EIF4H eukaryotic translation initiation factor 4H 1 1
MIRT047640 MED1 mediator complex subunit 1 1 1
MIRT047641 PTPRG protein tyrosine phosphatase, receptor type G 1 1
MIRT047642 ERMN ermin 1 1
MIRT047643 LYPD6 LY6/PLAUR domain containing 6 1 1
MIRT047644 SLC25A5 solute carrier family 25 member 5 1 1
MIRT047645 EPB41L2 erythrocyte membrane protein band 4.1 like 2 1 1
MIRT047646 ARFGEF1 ADP ribosylation factor guanine nucleotide exchange factor 1 1 1
MIRT047647 UBTF upstream binding transcription factor, RNA polymerase I 1 1
MIRT047648 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 1 1
MIRT047649 KLHL23 kelch like family member 23 1 1
MIRT047650 FGFR1 fibroblast growth factor receptor 1 1 1
MIRT047651 HOXD13 homeobox D13 1 1
MIRT047652 CHFR checkpoint with forkhead and ring finger domains 1 1
MIRT047653 ZNF592 zinc finger protein 592 1 1
MIRT047654 EIF1AD eukaryotic translation initiation factor 1A domain containing 1 1
MIRT047655 RRP1B ribosomal RNA processing 1B 1 1
MIRT047656 UHRF1 ubiquitin like with PHD and ring finger domains 1 1 1
MIRT047657 SORD sorbitol dehydrogenase 1 1
MIRT047658 PPM1G protein phosphatase, Mg2+/Mn2+ dependent 1G 1 1
MIRT047659 SF3B3 splicing factor 3b subunit 3 1 1
MIRT047660 PRPF8 pre-mRNA processing factor 8 1 1
MIRT047661 PRDX2 peroxiredoxin 2 1 1
MIRT047662 HNRNPF heterogeneous nuclear ribonucleoprotein F 1 1
MIRT047663 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT047664 CAB39L calcium binding protein 39 like 1 1
MIRT047665 ATP5F1 ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1 1 1
MIRT047666 PARL presenilin associated rhomboid like 1 1
MIRT047667 ERLIN1 ER lipid raft associated 1 1 1
MIRT047668 MARS methionyl-tRNA synthetase 1 1
MIRT047669 TRPM7 transient receptor potential cation channel subfamily M member 7 1 1
MIRT047670 DLG4 discs large MAGUK scaffold protein 4 1 1
MIRT047671 WDR74 WD repeat domain 74 1 1
MIRT047672 PWP1 PWP1 homolog, endonuclein 1 1
MIRT047673 RPRD1A regulation of nuclear pre-mRNA domain containing 1A 1 1
MIRT047674 NAP1L1 nucleosome assembly protein 1 like 1 1 1
MIRT047675 CTNND1 catenin delta 1 1 1
MIRT047676 IQCB1 IQ motif containing B1 1 1
MIRT047677 EIF1 eukaryotic translation initiation factor 1 1 1
MIRT047678 CDK19 cyclin dependent kinase 19 1 1
MIRT047679 LRP3 LDL receptor related protein 3 1 1
MIRT047680 UBE2D2 ubiquitin conjugating enzyme E2 D2 1 1
MIRT047681 GEMIN5 gem nuclear organelle associated protein 5 1 1
MIRT047682 GORASP2 golgi reassembly stacking protein 2 1 1
MIRT047683 DDX54 DEAD-box helicase 54 1 1
MIRT047684 CARHSP1 calcium regulated heat stable protein 1 1 1
MIRT047685 FAM168A family with sequence similarity 168 member A 1 1
MIRT047686 SF3B4 splicing factor 3b subunit 4 1 1
MIRT047687 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 1 1
MIRT047688 PLEKHB2 pleckstrin homology domain containing B2 1 1
MIRT047689 LRFN1 leucine rich repeat and fibronectin type III domain containing 1 1 1
MIRT047690 KIAA0100 KIAA0100 1 1
MIRT047691 DVL1 dishevelled segment polarity protein 1 1 1
MIRT047692 NOMO1 NODAL modulator 1 1 1
MIRT047693 MIS12 MIS12, kinetochore complex component 1 1
MIRT047694 GLOD4 glyoxalase domain containing 4 1 1
MIRT047695 USP11 ubiquitin specific peptidase 11 1 1
MIRT047696 UBE3C ubiquitin protein ligase E3C 1 1
MIRT047697 NT5DC3 5'-nucleotidase domain containing 3 1 1
MIRT047698 SPARC secreted protein acidic and cysteine rich 1 1
MIRT047699 SLC26A2 solute carrier family 26 member 2 1 1
MIRT047700 MED12 mediator complex subunit 12 1 1
MIRT047701 FAM219B family with sequence similarity 219 member B 1 1
MIRT047702 GOSR2 golgi SNAP receptor complex member 2 1 1
MIRT047703 MEAF6 MYST/Esa1 associated factor 6 1 1
MIRT047704 PIAS3 protein inhibitor of activated STAT 3 1 1
MIRT047705 ASB1 ankyrin repeat and SOCS box containing 1 1 1
MIRT047706 COL4A2 collagen type IV alpha 2 chain 1 1
MIRT047707 NUP205 nucleoporin 205 1 1
MIRT047708 POLR3A RNA polymerase III subunit A 1 1
MIRT047709 ATG3 autophagy related 3 1 1
MIRT047710 COPA coatomer protein complex subunit alpha 1 1
MIRT047711 CD59 CD59 molecule (CD59 blood group) 1 1
MIRT047712 TENM3 teneurin transmembrane protein 3 1 1
MIRT047713 TUBA1A tubulin alpha 1a 1 1
MIRT047714 LSS lanosterol synthase 1 1
MIRT047715 FASN fatty acid synthase 4 1
MIRT047716 PSMD13 proteasome 26S subunit, non-ATPase 13 1 1
MIRT047717 ZNF618 zinc finger protein 618 1 1
MIRT047718 TSPAN33 tetraspanin 33 1 1
MIRT047719 KANK1 KN motif and ankyrin repeat domains 1 1 1
MIRT047720 ADPRHL2 ADP-ribosylhydrolase like 2 1 1
MIRT047721 DPYSL2 dihydropyrimidinase like 2 1 1
MIRT047722 SUPT6H SPT6 homolog, histone chaperone 1 1
MIRT047723 B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 1 1
MIRT047724 ACTG1 actin gamma 1 3 2
MIRT047725 PLSCR1 phospholipid scramblase 1 1 1
MIRT047726 EEF2 eukaryotic translation elongation factor 2 1 1
MIRT047727 SFPQ splicing factor proline and glutamine rich 1 1
MIRT047728 VDAC1 voltage dependent anion channel 1 1 1
MIRT047729 ADCY9 adenylate cyclase 9 1 1
MIRT047730 OCRL OCRL, inositol polyphosphate-5-phosphatase 1 1
MIRT047731 ABCG2 ATP binding cassette subfamily G member 2 (Junior blood group) 1 1
MIRT047732 SLC25A13 solute carrier family 25 member 13 1 1
MIRT047733 IGSF9B immunoglobulin superfamily member 9B 1 1
MIRT047734 ESPL1 extra spindle pole bodies like 1, separase 1 1
MIRT047735 MCU mitochondrial calcium uniporter 1 1
MIRT047736 CDK8 cyclin dependent kinase 8 1 1
MIRT047737 CEP128 centrosomal protein 128 1 1
MIRT047738 TRAPPC12 trafficking protein particle complex 12 1 1
MIRT047739 SYNJ1 synaptojanin 1 1 1
MIRT047740 NOB1 NIN1/PSMD8 binding protein 1 homolog 1 1
MIRT047741 AP5S1 adaptor related protein complex 5 sigma 1 subunit 1 1
MIRT047742 RNF213 ring finger protein 213 1 1
MIRT047743 PSMB1 proteasome subunit beta 1 1 1
MIRT047744 BCR BCR, RhoGEF and GTPase activating protein 1 1
MIRT047745 PABPC1 poly(A) binding protein cytoplasmic 1 1 1
MIRT047746 NPTX1 neuronal pentraxin 1 1 1
MIRT047747 PRRC2C proline rich coiled-coil 2C 1 1
MIRT047748 PABPC3 poly(A) binding protein cytoplasmic 3 1 1
MIRT047749 NF2 neurofibromin 2 1 1
MIRT047750 RALBP1 ralA binding protein 1 1 1
MIRT047751 EHD4 EH domain containing 4 1 1
MIRT047752 RLIM ring finger protein, LIM domain interacting 1 1
MIRT076413 PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 2 2
MIRT084600 BCL2L11 BCL2 like 11 3 5
MIRT093335 RAPGEF2 Rap guanine nucleotide exchange factor 2 2 2
MIRT097757 ARSK arylsulfatase family member K 2 2
MIRT099597 ID4 inhibitor of DNA binding 4, HLH protein 2 6
MIRT249192 RAP2A RAP2A, member of RAS oncogene family 2 1
MIRT299201 CSRNP3 cysteine and serine rich nuclear protein 3 2 2
MIRT437577 ZFAND5 zinc finger AN1-type containing 5 2 1
MIRT437578 CNST consortin, connexin sorting protein 2 1
MIRT437579 TIAM1 T-cell lymphoma invasion and metastasis 1 2 1
MIRT438258 PTEN phosphatase and tensin homolog 2 2
MIRT438408 PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma 3 1
MIRT448051 SFRP1 secreted frizzled related protein 1 2 2
MIRT459965 POC1A POC1 centriolar protein A 2 2
MIRT466175 TMED5 transmembrane p24 trafficking protein 5 2 2
MIRT470412 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT475883 H3F3C H3 histone family member 3C 2 10
MIRT475919 H3F3B H3 histone family member 3B 2 8
MIRT493173 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT497272 GRK6 G protein-coupled receptor kinase 6 2 2
MIRT507101 GPCPD1 glycerophosphocholine phosphodiesterase 1 2 2
MIRT508100 ANKRD33B ankyrin repeat domain 33B 2 4
MIRT508628 PLA2G2C phospholipase A2 group IIC 2 2
MIRT510735 SON SON DNA binding protein 2 6
MIRT513973 CNOT6 CCR4-NOT transcription complex subunit 6 2 2
MIRT514262 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT514577 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 4
MIRT515044 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515692 TFPI tissue factor pathway inhibitor 2 2
MIRT515752 ONECUT3 one cut homeobox 3 2 2
MIRT517389 METTL7A methyltransferase like 7A 2 2
MIRT519732 ZNF460 zinc finger protein 460 2 2
MIRT520247 USP9X ubiquitin specific peptidase 9, X-linked 2 4
MIRT520270 URGCP upregulator of cell proliferation 2 2
MIRT522213 NR2C2 nuclear receptor subfamily 2 group C member 2 2 6
MIRT523700 FHL2 four and a half LIM domains 2 2 4
MIRT523978 DVL3 dishevelled segment polarity protein 3 2 2
MIRT525569 MTRNR2L7 MT-RNR2-like 7 2 6
MIRT525619 MTRNR2L3 MT-RNR2-like 3 2 4
MIRT530223 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT530549 SYNPO synaptopodin 2 2
MIRT531041 ZNF502 zinc finger protein 502 2 2
MIRT532579 GSS glutathione synthetase 2 2
MIRT534840 RAB15 RAB15, member RAS oncogene family 2 2
MIRT535793 MTRNR2L11 MT-RNR2-like 11 2 6
MIRT535811 MTRNR2L10 MT-RNR2-like 10 2 4
MIRT536818 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT539894 IRGQ immunity related GTPase Q 2 2
MIRT540209 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT540951 SLC25A43 solute carrier family 25 member 43 2 2
MIRT541937 ORC1 origin recognition complex subunit 1 2 4
MIRT542195 FUT1 fucosyltransferase 1 (H blood group) 2 6
MIRT542374 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542508 WDR13 WD repeat domain 13 2 2
MIRT542575 ZNF280B zinc finger protein 280B 2 2
MIRT542714 RPS15A ribosomal protein S15a 2 2
MIRT546705 RORA RAR related orphan receptor A 5 4
MIRT549929 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT550162 ZNF223 zinc finger protein 223 2 4
MIRT558566 CRLF3 cytokine receptor like factor 3 2 4
MIRT560945 TPM4 tropomyosin 4 2 4
MIRT574848 CADM1 cell adhesion molecule 1 2 2
MIRT575176 Atg9a autophagy related 9A 2 2
MIRT576664 Fam216a family with sequence similarity 216, member A 2 2
MIRT609434 MTX3 metaxin 3 2 2
MIRT612162 TCF15 transcription factor 15 2 2
MIRT617414 API5 apoptosis inhibitor 5 2 2
MIRT617469 CCS copper chaperone for superoxide dismutase 2 2
MIRT618780 HLA-E major histocompatibility complex, class I, E 2 2
MIRT618835 PHF20 PHD finger protein 20 2 2
MIRT619339 RNF2 ring finger protein 2 2 2
MIRT625244 C6orf89 chromosome 6 open reading frame 89 2 2
MIRT626439 CHDH choline dehydrogenase 2 2
MIRT634929 CHMP1B charged multivesicular body protein 1B 2 2
MIRT635875 SLC11A2 solute carrier family 11 member 2 2 2
MIRT636235 SLC24A4 solute carrier family 24 member 4 2 2
MIRT636641 CHAF1B chromatin assembly factor 1 subunit B 2 2
MIRT640545 C3orf36 chromosome 3 open reading frame 36 2 2
MIRT648661 ALKBH4 alkB homolog 4, lysine demethylase 2 2
MIRT650186 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT650790 GSR glutathione-disulfide reductase 2 2
MIRT652027 TTYH3 tweety family member 3 2 2
MIRT652517 TMEM109 transmembrane protein 109 2 2
MIRT661940 MAVS mitochondrial antiviral signaling protein 2 2
MIRT661951 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT662020 ZNF445 zinc finger protein 445 2 2
MIRT664015 LOH12CR1 BLOC-1 related complex subunit 5 2 2
MIRT664059 KIAA1551 KIAA1551 2 2
MIRT666872 POU2F2 POU class 2 homeobox 2 2 2
MIRT669168 CCNG1 cyclin G1 2 2
MIRT673243 KLHDC8A kelch domain containing 8A 2 2
MIRT680410 SFT2D2 SFT2 domain containing 2 2 2
MIRT680484 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT683577 CARD8 caspase recruitment domain family member 8 2 2
MIRT684398 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT684558 ZNF708 zinc finger protein 708 2 2
MIRT685421 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT686050 SLC5A5 solute carrier family 5 member 5 2 2
MIRT687955 HHIP hedgehog interacting protein 2 2
MIRT688181 FRRS1 ferric chelate reductase 1 2 2
MIRT688303 FAM208A family with sequence similarity 208 member A 2 2
MIRT688900 C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 2 2
MIRT689205 ZNF574 zinc finger protein 574 2 2
MIRT689917 ACOT13 acyl-CoA thioesterase 13 2 2
MIRT692931 EXOSC2 exosome component 2 2 2
MIRT693632 CENPL centromere protein L 2 2
MIRT694762 FZD2 frizzled class receptor 2 2 2
MIRT695373 PHAX phosphorylated adaptor for RNA export 2 2
MIRT696630 WDR77 WD repeat domain 77 2 2
MIRT696690 APOC3 apolipoprotein C3 2 2
MIRT697367 ZNF394 zinc finger protein 394 2 2
MIRT697611 XIAP X-linked inhibitor of apoptosis 2 2
MIRT697737 USP6NL USP6 N-terminal like 2 2
MIRT697788 UBXN7 UBX domain protein 7 2 2
MIRT698361 TMEM127 transmembrane protein 127 2 2
MIRT704519 CNKSR3 CNKSR family member 3 2 2
MIRT704600 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT705849 AHCY adenosylhomocysteinase 2 2
MIRT707093 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT707154 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT707243 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT707356 XPNPEP3 X-prolyl aminopeptidase 3 2 2
MIRT707459 PPFIBP1 PPFIA binding protein 1 2 2
MIRT707503 AXL AXL receptor tyrosine kinase 2 2
MIRT707647 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT707703 FAM118A family with sequence similarity 118 member A 2 2
MIRT707714 CDC6 cell division cycle 6 2 2
MIRT707825 TMEM170A transmembrane protein 170A 2 2
MIRT707966 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT708006 NUDT4 nudix hydrolase 4 2 2
MIRT708035 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT708073 LIX1L limb and CNS expressed 1 like 2 2
MIRT708131 GK5 glycerol kinase 5 (putative) 2 2
MIRT708200 ANP32E acidic nuclear phosphoprotein 32 family member E 2 2
MIRT708210 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT708940 CRY2 cryptochrome circadian clock 2 2 2
MIRT709199 SAPCD2 suppressor APC domain containing 2 2 2
MIRT714403 FBXO31 F-box protein 31 2 2
MIRT714629 KIAA1143 KIAA1143 2 2
MIRT720741 ELOVL7 ELOVL fatty acid elongase 7 2 2
MIRT720894 CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 2 2
MIRT723335 DGAT1 diacylglycerol O-acyltransferase 1 2 2
MIRT724452 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT731180 SERPINE1 serpin family E member 1 3 1
MIRT732377 GP1BA glycoprotein Ib platelet alpha subunit 2 1
MIRT733585 SDC1 syndecan 1 3 0
MIRT734393 ARNTL aryl hydrocarbon receptor nuclear translocator like 3 0
MIRT735361 BDNF brain derived neurotrophic factor 4 0
MIRT735799 MAP2K6 mitogen-activated protein kinase kinase 6 3 0
MIRT735868 KRAS KRAS proto-oncogene, GTPase 1 0
MIRT736834 SKA1 spindle and kinetochore associated complex subunit 1 3 0
MIRT737248 LEF1-AS1 LEF1 antisense RNA 1 2 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-10a RAR-alpha antagonist Ro-41-5253 NULL NULL Northern blot pancreatic cancer 19747919 2009 down-regulated
miR-10a 5-Fluorouracil approved 3385 Microarray HCT-8 colon cancer cell line 19956872 2010 down-regulated
miR-10a Oxaliplatin (L-OHP) approved 5310940 Microarray HCT-116 colon cancer cell line 19956872 2010 down-regulated
miR-10a Mistletoe lectin-I NULL NULL Microarray colorectal cancer cells HT-29 cells 20955366 2011 down-regulated
miR-10a Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
miR-10a All-trans-retinoic acid (ATRA) approved 444795 Microarray acute myeloid leukemia (AML) cell line HL-60 21518431 2011 down-regulated
miR-10a Arsenic trioxide approved 14888 Quantitative real-time PCR acute promyelocytic leukemia 22072212 2012 up-regulated
miR-10a All-trans-retinoic acid (ATRA) approved 444795 Quantitative real-time PCR regulatory T cells (T(reg) cells) 22544395 2012 up-regulated
miR-10a Glucocorticoid NULL NULL Quantitative real-time PCR Eosinophilic esophagitis 22815788 2012 up-regulated
miR-10a Glucocorticoid NULL NULL TaqMan low-density array Eosinophilic esophagitis 22815788 2012 up-regulated
miR-10a Galactose NULL 6036 Quantitative real-time PCR lens 22736950 2012 up-regulated
miR-10a Ethanol NULL 702 Microarray fetal mouse brains 19091803 2009 up-regulated
miR-10a Ethanol NULL 702 Northern blot fetal mouse brains 19091803 2009 up-regulated
miR-10a Ethanol NULL 702 Quantitative real-time PCR fetal mouse brains 19091803 2009 up-regulated
miR-10a Reversine NULL 210332 Microarray C2C12 myoblast cells 24513286 2014 down-regulated
miR-10a Longevinex NULL NULL Quantitative real-time PCR ischemia/reperfusion [I/R] rat model 21203465 2011 down-regulated
miR-10a Longevinex NULL NULL Quantitative real-time PCR normal heart 21203465 2011 up-regulated
miR-10a Resveratrol NULL 445154 Quantitative real-time PCR ischemia/reperfusion [I/R] rat model 21203465 2011 down-regulated
miR-10a Resveratrol NULL 445154 Quantitative real-time PCR normal heart 21203465 2011 up-regulated
miR-10a Aristolochic acid NULL 2236 Microarray kidney 25106556 2014 up-regualted
miR-10a Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-10a-5p Hydroxycamptothecin (HCPT) NULL 97226 Microarray human Tenon's fibroblasts (HTFs) 24681041 2014 down-regulated
miR-10a-5p Comfrey NULL 6440495 Microarray rat liver 21370286 2011 down-regulated
miR-10a-5p Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miR-10a-5p Propranolol approved 4946 Quantitative real-time PCR heart 22847192 2012 up-regulated
miR-10a-5p Acarbose Approved 444254 Microarray diabetic rats cells 24260283 2014 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-10a Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (BGC823)
hsa-mir-10a Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-10a Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-10a Cisplatin 5460033 NSC119875 approved resistant cell line (W1)
hsa-mir-10a Methotrexate 126941 NSC740 approved sensitive cell line (W1)
hsa-mir-10a Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-mir-10a Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-10a Androstenedione 6128 NSC9563 resistant cell line (MCF-7)
hsa-mir-10a Tamoxifen 2733525 NSC180973 approved sensitive tissue (ER-positive breast cancer)
hsa-mir-10a Fluorouracil 3385 NSC19893 approved sensitive cell line (OE19)
hsa-mir-10a Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-mir-10a Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)
hsa-mir-10a Cisplatin 5460033 NSC119875 approved resistant cell line (BGC-823)
hsa-miR-10a-5p (2E,5Z)-2-[(5-acetyl-4-methyl-1,3-thiazol-2-yl)hydrazinylidene]-5-[(2-methoxyphenyl)methylidene]-1,3-thiazolidin-4-one 135472679 NSC658292 resistant
hsa-miR-10a-5p (3aR)-7-[3-[4-[3-[[(3aR)-8-methoxy-10-oxo-2,3,3a,10a-tetrahydro-1H-cyclopenta[c][1]benzazepin-7-yl]oxy]propyl]piperazin-1-yl]propoxy]-8-methoxy-2,3,3a,10a-tetrahydro-1H-cyclopenta[c][1]benzazepin-10-one 24202913 NSC726262 resistant
hsa-miR-10a-5p (4z,6z)-4,6-dibenzylidene-2,2-dimethyl-1,3-dioxan-5-one 5387558 NSC624512 resistant
hsa-miR-10a-5p (5e)-5-benzylidene-3-(2,4,5-trichlorophenyl)-2-(3,4,5-trimethoxyphenyl)-1,3-thiazolidin-4-one 5470506 NSC702355 resistant
hsa-miR-10a-5p (6e,7r,8r,8as)-8-methyl-6-[(2r)-2-methylhexylidene]-8-phenylmethoxy-1,2,3,5,7,8a-hexahydroindolizin-7-ol 5470307 NSC699382 resistant
hsa-miR-10a-5p (8S,9S,10R,11S,13S,14S,17S)-11-hydroxy-10,13-dimethyl-17-(2-phenyl-1,3-thiazol-4-yl)-1,2,6,7,8,9,11,12,14,15,16,17-dodecahydrocyclopenta[a]phenanthren-3-one 261360 NSC93354 resistant
hsa-miR-10a-5p (e)-1-(3,5-ditert-butyl-4-hydroxyphenyl)-3-[4-(diethylamino)phenyl]prop-2-en-1-one 5471159 NSC709103 resistant
hsa-miR-10a-5p (e)-1-[3-[(4,6-dianilino-1,3,5-triazin-2-yl)amino]phenyl]-3-(3,4,5-trimethoxyphenyl)prop-2-en-1-one 45028636 NSC743530 resistant
hsa-miR-10a-5p (e)-2-methyl-1-[2-(2-methyl-1h-indol-3-yl)indolin-1-yl]but-2-en-1-one 5388204 NSC633484 resistant
hsa-miR-10a-5p [(1s,2s,3r,4s,7r,9s,10s,12r,15s)-4,12-diacetyloxy-15-[(2r,3s)-3-(cyclohexanecarbonylamino)-3-cyclohexyl-2-hydroxypropanoyl]oxy-1,9-dihydroxy-10,14,17,17-tetramethyl-11-oxo-6-oxatetracyclo[11.3.1.03,10 383477 NSC671869 resistant
hsa-miR-10a-5p [(3S,10R,13S,16E)-16-[[3-methoxy-4-(2-piperidin-1-ylethoxy)phenyl]methylidene]-10,13-dimethyl-17-oxo-2,3,4,7,8,9,11,12,14,15-decahydro-1H-cyclopenta[a]phenanthren-3-yl] acetate 24203176 NSC727082 sensitive
hsa-miR-10a-5p [(3s,8r,10r,13s,17e)-10,13-dimethyl-17-(phenylcarbamoyloxyimino)-1,2,3,4,7,8,9,11,12,14,15,16-dodecahydrocyclopenta[a]phenanthren-3-yl] n-phenylcarbamate 9569960 NSC629229 sensitive
hsa-miR-10a-5p [(7S,9E,11S,12R,13S,14R,15R,16R,17S,18S,19E,21Z)-26-[(E)-[(2,4-dinitrophenyl)hydrazinylidene]methyl]-2,15,17,27,29-pentahydroxy-11-methoxy-3,7,12,14,16,18,22-heptamethyl-6,23-dioxo-8,30-dioxa-24-azatetracyclo[23.3.1.14,7.05,28]triaconta-1(29),2,4,9,19,21, 135483937 NSC144126 resistant
hsa-miR-10a-5p [(8R,10S,13R)-7,12-diacetyloxy-17-[5,5-bis(4-chlorophenyl)pent-4-en-2-yl]-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-3-yl] acetate 376380 NSC657282 resistant
hsa-miR-10a-5p [3,4,5-triacetyloxy-6-[3-cyano-4-(furan-2-yl)-2-oxo-6-phenylpyridin-1-yl]oxan-2-yl]methyl acetate 368873 NSC640212 resistant
hsa-miR-10a-5p [3,4,5-triacetyloxy-6-[3-phenyl-2,4-bis(sulfanylidene)quinazolin-1-yl]oxan-2-yl]methyl acetate 368629 NSC639741 resistant
hsa-miR-10a-5p [4-[[dimethyl(octadecyl)azaniumyl]methyl]phenyl]methyl-dimethyl-octadecylazanium;bromide 361976 NSC625458 resistant
hsa-miR-10a-5p [6-[(E)-(carbamothioylhydrazinylidene)methyl]pyridin-3-yl] acetate 9555726 NSC144055 resistant
hsa-miR-10a-5p 1-(dimethylamino)-4-methyl-4H-pyrido[3,4-g]quinoline-5,10-dione 388892 NSC684118 sensitive
hsa-miR-10a-5p 1-[(2S)-3-[[2,7-di(piperidin-1-yl)-2,3,4a,5,7,7a-hexahydrofuro[3,4-b][1,4]dioxin-3-yl]oxy]oxolan-2-yl]piperidine 253322 NSC76150 resistant
hsa-miR-10a-5p 1-[3-(3,4-dimethoxyphenyl)-2-(2,4-dinitrophenyl)-3,4-dihydropyrazol-5-yl]naphthalen-2-ol 390439 NSC687793 resistant
hsa-miR-10a-5p 1-[7-methyl-8-(3,4,5-trimethoxyphenyl)-7,8-dihydro-6h-[1,3]dioxolo[4,5-g]chromen-6-yl]piperazine 384846 NSC675364 resistant
hsa-miR-10a-5p 10,16-bis[2-(dimethylamino)ethyl]-1,9,10,16-tetrazapentacyclo[9.6.2.02,7.08,19.014,18]nonadeca-2,4,6,8,11(19),12,14(18)-heptaene-15,17-dione 399629 NSC710546 sensitive
hsa-miR-10a-5p 1h-pyrimido[4,5-b]quinoline-2,4-dithione 5472868 NSC722222 resistant
hsa-miR-10a-5p 2-(11h-indolo[3,2-c]quinolin-6-ylamino)ethanol NSC736606 sensitive
hsa-miR-10a-5p 2-(2-chlorophenyl)-5,7-dihydroxy-8-(3-hydroxy-1-methylpiperidin-4-yl)chromen-4-one 5466794 NSC642740 resistant
hsa-miR-10a-5p 2-trans-n-buten-1-yl-estradiol 5468334 NSC669229 resistant
hsa-miR-10a-5p 2,5-diphenyl-1h-[1,2,4]triazino[4,3-a]quinoxaline 399102 NSC709518 resistant
hsa-miR-10a-5p 3-(((cyclohexylamino)carbonyl)oxy)-4-methyl-1,3-thiazole-2(3h)-thione 372703 NSC648263 resistant
hsa-miR-10a-5p 3-[4-(7-chloroquinolin-4-yl)oxy-3-methoxyphenyl]-5-phenyl-3,4-dihydropyrazole-2-carbaldehyde 155810020 NSC762559 resistant
hsa-miR-10a-5p 3,3,4,4,4-pentachloro-1-phenylbutan-1-one 405828 NSC723515 sensitive
hsa-miR-10a-5p 4-[[(5s,8ar)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5a,6,8a,9-tetrahydro-5h-[2]benzofuro[5,6-f][1,3]benzodioxol-5-yl]amino]benzoic acid 374328 NSC651852 resistant
hsa-miR-10a-5p 4-appt 5995211 NSC195327 resistant
hsa-miR-10a-5p 4-methyl-3-[4-[2-[4-(4-methyl-5-sulfanylidene-1h-1,2,4-triazol-3-yl)phenyl]iminohydrazinyl]phenyl]-1h-1,2,4-triazole-5-thione 5472009 NSC715974 resistant
hsa-miR-10a-5p 4-naphthalen-2-yl-2,4-dioxo-3-(3-oxo-1H-2-benzofuran-1-yl)-N-[3-(trifluoromethyl)phenyl]butanamide 369471 NSC641241 resistant
hsa-miR-10a-5p 5'-chloro-2'-methoxy-3-nitrosalicylanilide 186169 NSC79459 resistant
hsa-miR-10a-5p 5,6-dimethoxy-9-(methylthio)furo[3',4':4,5]cyclopenta[1,2,3-ij]isoquinoline 363754 NSC628946 resistant
hsa-miR-10a-5p 5,6,7-trimethoxy-N-(4H-pyrazolo[1,5-a]indol-2-yl)-1H-indole-2-carboxamide 404173 NSC720326 resistant
hsa-miR-10a-5p 6-(chloromethyl)-2-oxo-N-pentylchromene-3-carboxamide 402500 NSC716526 sensitive
hsa-miR-10a-5p 6-methoxy-1h-pyrazolo[3,4-b]quinoxalin-3-amine 395806 NSC700694 resistant
hsa-miR-10a-5p 6,7-diacetoxyisoflavan 353129 NSC600289 resistant
hsa-miR-10a-5p 8-[(4-tert-butylphenoxy)methyl]-1,3-dimethyl-7H-purine-2,6-dione 235292 NSC36525 resistant
hsa-miR-10a-5p 8455ab 1549990 NSC24189 resistant
hsa-miR-10a-5p 8b-hydroxy-9b,10b-epoxyverrucarin a 5351311 NSC328166 resistant
hsa-miR-10a-5p Antibiotic p 168 5477807 NSC356885 resistant
hsa-miR-10a-5p Antineoplastic-656904 376224 NSC656904 resistant
hsa-miR-10a-5p Aquatris(1,3-diphenylpropane-1,3-dionato)neodymium(iii) 24202395 NSC647040 resistant
hsa-miR-10a-5p Bas100 monohydrate 45028404 NSC742554 resistant
hsa-miR-10a-5p Berberine iodide 72350 NSC150446 resistant
hsa-miR-10a-5p Bindschedler's green 73516 NSC7811 resistant
hsa-miR-10a-5p Bisarylpurine 45028308 NSC742146 resistant
hsa-miR-10a-5p Bisarylpurine 45028308 NSC742146 resistant
hsa-miR-10a-5p C4, carbonyl, ethyl prodigiosine 135540855 NSC742416 resistant
hsa-miR-10a-5p Cgp 57380 11644425 NSC741567 sensitive
hsa-miR-10a-5p Cinerubin a hcl 5458466 NSC243022 sensitive
hsa-miR-10a-5p Cis-dichlorobis(4-methoxyphenethylamine)platinum(ii) 498558 NSC631305 resistant
hsa-miR-10a-5p Cis-difluorobis(1-phenylhexane-1,3-dionato)titanium(iv) NSC637220 resistant
hsa-miR-10a-5p Cyano-[4-[[[3-(trifluoromethyl)phenyl]methylamino]carbamoyl]pyridin-1-ium-1-yl]boron 6334922 NSC698276 resistant
hsa-miR-10a-5p Cytembena 23663958 NSC104801 resistant
hsa-miR-10a-5p Cytovaricin 5477715 NSC349622 resistant
hsa-miR-10a-5p Diethyl 2-[[4-[[[3-ethoxycarbonyl-7-(trifluoromethyl)quinoxalin-2-yl]amino]methyl]benzoyl]amino]pentanedioate 390810 NSC688812 resistant
hsa-miR-10a-5p Diisopropoxybis(1,4-naphthochinone-2-olato)titanium(iv) 368058 NSC638383 resistant
hsa-miR-10a-5p Echinomycin 3197 NSC526417 resistant
hsa-miR-10a-5p Ethyl 2-((4-(2-methyl-4-oxo-3(4h)-quinazolinyl)phenyl)hydrazono)-3-oxobutanoate 135494007 NSC691084 resistant
hsa-miR-10a-5p Ethyl 2-((4-(6-bromo-2-methyl-4-oxo-3(4h)-quinazolinyl)phenyl)hydrazono)-3-oxobutanoate 135494008 NSC691085 resistant
hsa-miR-10a-5p Ethyl 5-amino-4-(3,4-dihydro-2h-1,5-benzodioxepin-7-ylamino)-2-methylsulfanylthieno[2,3-d]pyrimidine-6-carboxylate 399955 NSC711107 resistant
hsa-miR-10a-5p From combretum caffrum plant 5386397 NSC609397 resistant
hsa-miR-10a-5p Kuc100204 378309 NSC660313 resistant
hsa-miR-10a-5p Lddhtajmmdseme-okkqscsosa-n 6712634 NSC702655 sensitive
hsa-miR-10a-5p Ls-77867 395636 NSC700418 resistant
hsa-miR-10a-5p Methyl (1s,10r)-6-methyl-10-nonyl-7,9,12-triazatricyclo[6.3.1.04,12]dodeca-5,8-diene-5-carboxylate 401693 NSC715423 resistant
hsa-miR-10a-5p Methyl 3-butylsulfanyl-2-[[(e)-3-(6-methyl-2,4-dioxo-1h-pyrimidin-5-yl)prop-2-enoyl]amino]propanoate 5383838 NSC201241 resistant
hsa-miR-10a-5p Mggh 5351153 NSC32946 resistant
hsa-miR-10a-5p N-[2-chloro-5-(trifluoromethyl)phenyl]-4-naphthalen-2-yl-2,4-dioxo-3-(3-oxo-1h-2-benzofuran-1-yl)butanamide 369469 NSC641239 resistant
hsa-miR-10a-5p N-[3-bromo-6-oxo-1-(4-phenylpiperidin-1-yl)-4,5-dihydrocyclopenta[c]thiophen-4-yl]-2,2,2-trifluoroacetamide 378804 NSC662123 resistant
hsa-miR-10a-5p NSC657492 NSC657492 sensitive
hsa-miR-10a-5p NSC751830 NSC751830 sensitive
hsa-miR-10a-5p Plumericin 5281545 NSC112152 resistant
hsa-miR-10a-5p Propan-2-yl (1r,9s,12e)-3,4,6-trimethoxy-11-[(4-methoxyphenyl)methyl]-5-methyl-10-oxo-12-[(2,4,5-trimethoxy-3-methylphenyl)methylidene]-11,13-diazatricyclo[7.3.1.02,7]trideca-2(7),3,5-triene-13-carbox 6330789 NSC622075 resistant
hsa-miR-10a-5p Resorufin 69462 NSC12097 resistant
hsa-miR-10a-5p Rhamnazin 5320945 NSC678106 resistant
hsa-miR-10a-5p Roridin a, 8-hydroxy-9b,10b-epoxy- 5458716 NSC327993 resistant
hsa-miR-10a-5p Sb-236687 17892742 NSC756422 sensitive
hsa-miR-10a-5p Sergeolide,desacetyl 125729 NSC364170 resistant
hsa-miR-10a-5p Sodium;4-[[(5s,8ar)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5a,6,8a,9-tetrahydro-5h-[2]benzofuro[5,6-f][1,3]benzodioxol-5-yl]amino]benzoic acid 54612576 NSC651853 resistant
hsa-miR-10a-5p Tert-butyl n-[6-[2-[(2-amino-2-oxoethyl)carbamoyl]pyrrolidin-1-yl]-5-(9h-fluoren-9-ylmethoxycarbonylamino)-6-oxohexyl]carbamate 383818 NSC672434 sensitive
hsa-miR-10a-5p Tetra(isobutenyl)antimony bromide NSC651199 resistant
hsa-miR-10a-5p Tributylgermyl 2-acetoxy-2-phenyl-acetate 16683233 NSC645575 resistant
hsa-miR-10a-5p Verrucarin a 9,10-epoxide 5358836 NSC283445 sensitive
hsa-miR-10a-5p Z28714792 2671841 NSC746248 resistant
hsa-miR-10a-5p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-10a-5p Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-10a-5p Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-10a-5p Imatinib 5291 NSC743414 approved resistant High Myelogenous Leukemia cell line (MYL)
hsa-miR-10a-5p Tamoxifen 2733525 NSC180973 approved sensitive High Breast Cancer cell line (MCF-7, LY2)
hsa-miR-10a-5p Cyclopamine 442972 NSC734950 sensitive Low Prostate Cancer cell line (DU-145, PC-3)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved sensitive Low Prostate Cancer cell line (DU-145, PC-3)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant High Esophageal Squamous Cell Carcinoma tissue and cell line (TE1, TE5, TE8, TE9, TE10, TE11, TE13)
hsa-miR-10a-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PaCa-2)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer tissue
hsa-miR-10a-5p Vinorelbine 44424639 approved resistant High Non-Small Cell Lung Cancer tissue
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H358, H1993)
hsa-miR-10a-5p Fluorouracil + Oxaliplatin resistant High Colorectal Cancer tissue
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-miR-10a-5p Cytarabine 6253 NSC287459 approved sensitive Low Acute Myeloid Leukemia tissue and cell line (KG-1a, Kasumi-1, K562, OCI-AML3)
hsa-miR-10a-5p Doxorubicin 31703 NSC123127 approved resistant High Gastric Cancer cell line (SGC7901)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant Low Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant Low Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-10a-5p Doxorubicin 31703 NSC123127 approved resistant Low Acute Myeloid Leukemia tissue and cell line (HL-60)
hsa-miR-10a-5p Sorafenib 216239 NSC747971 approved resistant Low Hepatocellular Carcinoma cell line (HepG2, Huh-7)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-10a-5p Sorafenib 216239 NSC747971 approved resistant High Hepatocellular Carcinoma cell line (Huh-7, PLC)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant High Small Cell Lung Cancer cell line (H446)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive High Pancreatic Cancer cell line (BxPC-3)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive Low Cervical Cancer tissue
hsa-miR-10a-5p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer cell line (HCC827)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-10a-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-miR-10a-5p Temozolomide 5394 NSC362856 approved resistant Low Glioblastoma cell line (U87)
hsa-miR-10a-5p Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-10a-5p Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (HT-29)
hsa-miR-10a-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-10a-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-miR-10a-5p Oxaliplatin 6857599 NSC266046 approved resistant Low Colorectal Cancer cell line (SW480, HCT-116)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant Low Non-Small Cell Lung Cancer cell line (A549, H1299)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (W1)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved sensitive High Endometrial Serous Carcinoma cell line (USPC1)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive Low Hepatocellular Carcinoma cell line (Huh-7)
hsa-miR-10a-5p Gefitinib 123631 NSC715055 approved sensitive Low Esophageal Squamous Cell Carcinoma cell line (TE1, KYSE450)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved resistant High Ovarian Cancer cell line (SKOV3ip1, HeyA8)
hsa-miR-10a-5p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer tissue
hsa-miR-10a-5p Sorafenib 216239 NSC747971 approved resistant High Hepatocellular Carcinoma cell line (Huh-7, PLC)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-10a-5p Temozolomide 5394 NSC362856 approved resistant High Glioblastoma cell line (A172)
hsa-miR-10a-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-10a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-10a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (A375)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (mitochondrial RNA)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (cytosolic RNA)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (total RNA)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-10a-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved resistant cell line (SKVO3ip1)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved resistant cell line (HeyA8)
hsa-miR-10a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-miR-10a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-10a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved resistant cell line (HS578T)
hsa-miR-10a-5p Tamoxifen 2733525 NSC180973 approved resistant cell line (LCC2)
hsa-miR-10a-5p Tamoxifen+Fulvestrant resistant cell line (LCC9)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-10a-5p Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-miR-10a-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-10a-5p 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-miR-10a-5p Ethanol+Tamoxifen resistant cell line (LY2)
hsa-miR-10a-5p Methotrexate 126941 NSC740 approved sensitive cell line (HT29)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-miR-10a-5p Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-miR-10a-5p Pegylated interferon alpha+Ribavirin resistant tissue (chronic hepatitis C)
hsa-miR-10a-5p Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (IGROV-1)
hsa-miR-10a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-10a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-10a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)
hsa-miR-10a-5p Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-10a-5p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-miR-10a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)

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