pre-miRNA Information
pre-miRNA hsa-mir-744   
Genomic Coordinates chr17: 12081899 - 12081996
Synonyms MIRN744, hsa-mir-744, MIR744
Description Homo sapiens miR-744 stem-loop
Comment This sequence was identified as a miRNA candidate by Berezikov et al. using RAKE and MPSS techniques .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-744-5p
Sequence 11| UGCGGGGCUAGGGCUAACAGCA |32
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN23015028 1 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs557969425 1 dbSNP
rs748252260 4 dbSNP
rs1470408501 7 dbSNP
rs1178657616 10 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
B6B8SM miR-744-5p Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Urine Real-time polymerase chain reaction
Gene Information
Gene Symbol TM9SF3   
Synonyms EP70-P-iso, SMBP
Description transmembrane 9 superfamily member 3
Transcript NM_020123   
Expression
Putative miRNA Targets on TM9SF3
3'UTR of TM9SF3
(miRNA target sites are highlighted)
>TM9SF3|NM_020123|3'UTR
   1 AGACCCAAGAAAACCTGGAACTTTGGATCAATTTCTTTTTCATAGGGGTGGAACTTGCACAGCAAAAACAAACAAACGCA
  81 AGAAGAGATTTGGGCTTTAACACACTGGGTACTTTGTGGGTCTCTCTTTCGTCGGTGGCTTAAAGTAACATCTATTTCCA
 161 TTGATCCTAGGTTCTTCCTGACTGCTTTCTCCAACTGTTCACAGCAAATGCTTGGATTTTATGCAGTAGGCATTACTACA
 241 GTACATGGCTAATCTTCCCAAAAACTAGCTCATTAAAGATGAAATAGACCAGCTCTCTTCAGTGAAGAGGACAAATAGTT
 321 TATTTAAAGCATTTGTTCCAATAAAATAAATAGAGGGAAACTTGGATGCTAAAATTACATGAATAGGAATCTTCCTGGCA
 401 CTTAGTGTTTCTATGTTATTGAAAAATGATGTTCCAGAAAGATTACTTTTTTCCTCTTATTTTTACTGCCATTGTCGACC
 481 TATTGTGGGACATTTTTATATATTGAATCTGGGTTCTTTTTTGACTTTTTTTTTTTCCCAATCCAACAGCATCCTTTTTT
 561 TTAAAAGAGAGAATTAGAAAATATTAAATCCTGCATGTAATATATCTGCTGTCATCTTAGTTGGACCAACTTCCCATTTA
 641 TTTATCTTAAAACTATACAGTTACATCTTAATTCCATCCAAAGAAGATACAGTTTGAAGACAGAAGTGTACTCTCTACAA
 721 TGCAATTTACTGTACAGTTAGAAAGCAAAGTGTTAAATGGAGAAGATACTTGTTTTTATTAAACATTTTGAGATTTAGAT
 801 AAACTACATTTTAACTGAATGTCTAAAGTGATTATCTTTTTTCCCCCCAAGTTAGTCTTAAATCTTTTGGGTTTGAATGA
 881 AGGTTTTACATAAGAAATTATTAAAAACAAGGGGGGTGGGTAATAAATGTATATAACATTAAATAATGTAACGTAGGTGT
 961 AGATTCCCAAATGCATTTGGATGTACAGATCGACTACAGAGTACTTTTTTCTTATGATGATTGGTGTAGAAATGTGTGAT
1041 TTGGGTGGGCTTTTACATCTTGCCTACCATTGCATGAAACATTGGGGTTTCTTCAAAATGTGTGTGTCATACTTCTTTTG
1121 GGAGGGGGGTTGTTTTCTTCTGTTTATTTTCTGAGACTCCTACAGGAGCCAAATTTGTAATTTAGAGACACTTAATTTTG
1201 TTAATCCTGTCTGGGACACTTAAGTAACATCTAAAGCATTATTGCTTTAGAATGTTCAAATAAAATTTCCTGACCAAATT
1281 GTTTTGTGGAAATAGATGTGTTTGCAATTTGAAGATATCTTTCTGTCCAGAAGGCAAAATTACCGAATGCCATTTTTAAA
1361 AGTATGCTATAAACTATGCTACTCTCATACAGGGGACCCGTATTTTAAAATCTCCAGACTTGCTTACATCTAGATTATCC
1441 AGCACAATCATAAAGTGAATGACAAACCCTTTGAATGAAATTGTGGCACAAAATCTGTTCAGGTTGGTGTACCGTGTAAA
1521 GTGGGGATGGGGTAAAAGTGGTTAACGTACTGTTGGATCAACAAATAAAGGTTACAGTTTTGTAAGAGAAGTGATTTGAA
1601 TACATTTTTCTGGAACTATTCATAATATGAAGTTTTCCTAGAACCACTGAGTTTCTAGTTTAATAGTTTGCTATGCAAAT
1681 GACCACCTAAAACAATACTTTATATTGTTATTTTTAGAAAGACTCAAAACACCTGTATTTAAACCTTAATATGAAAATCA
1761 TGCAATTAATAGTTACACAAGATGTTTTCATTACAAAATATGTACCTATCTATTGATGGACTCTACATCCTATATTGTGA
1841 CATGTAAGTCCTTTAAAAGGTGAAAAGTATGATTTCTTACCACTTAAGTATGATTGATATGATCCAACAAATTTGATCAG
1921 AAGCTGTAGGTAAATCCTCTTCTGAAGCCAAAATGGTATATTAAATATAATTTATTGGTACTTCCATTTTCTCTTCCTTC
2001 TTACTTGCCTTTAAGATCTTATAAAAAAGAAACTAAAAGTTAATATTTAGTTGCCTATATTATGTAACCTTTTAACTATA
2081 TATAAAGTACTTTTTTGGTTTCTTTCTCACCACTTTTATTCAAAAGTACTTTTAACATACCAATACATAGTCTGTCTGAT
2161 GGGAGTATAAATTGGACAGTAAGGTTTTGTCTTAATAAAATGAAATTTGTTTCTCATGATATGAATCTTGCAGGTAAGAT
2241 GTAGGGTTTATTGAAAATGTGTGGGTTAAATGCTTTCAGGTACACCAATTCTTTCTACTAAATTGAGCTCTATTTGAAGT
2321 TCTTTGGAATCTGTGGTGAAAAATAATTTTCTGATTTCCAAATACATTAAGAGCATTAAATGAATATTAATCACCTTTAA
2401 AGTCTTTTAGAAAAGGACTTGTATTGGTTTTTGGCTGCATAGAGGGGTTGAATAAGTGTATGTATGTGTGTGCGTGTGTG
2481 TGTGTCTTCTTAAAGAAGATGTAATTCACAAATAGTTTAGCTCCCTAGCGCTCAGTTGTAGAATAGAAAATAGAACATTA
2561 TTCAAGTTAATTGAAAGGTGAGGTTTTTATACCCCCACTAATGCTGTGTATCTGTCTTTCGTTTGTTAACATTATTTGCT
2641 TAATTTCTTTCAACTCACACTTTGGATAATACTATCAAAAACTAAGGCTAAACATTCCTTGTGTATCTTTAAGCATGCTT
2721 CTCCTGAAATTTAACTACATTAGTAGTTGACATTTGTATACATATATCCTAATACAAGAGTAGGATAAGGTGGAAATGTA
2801 ATGGCCTGAGGGATGGTGAAGCATTCTTTTAGTATTTTTCATCATGTTGGGCTCCTAGATTGTACTGGGGTTGCCCATAA
2881 ATCAAACCCCATACTCTTAGAATTCATTATATTATGGTGATATCCGAACCTAGTGAATGGTATGCTTGGGTGTTTTCCAT
2961 TGAGAGTGGATGGACCTCTTTATAAAGTTGGTTGCTGCAAAATCCAGTTCTTCCAAAAGCCACTTTATTTAGGGTTTATT
3041 CACAAGTCATATCCATTTTGGTACAGTGTTTGTTTCCTAATATTTATTAACCACCTTATACCAAATGTCTTGCAAAGAAA
3121 TGTTATTAAAACCTTGAATTTTTACAAATGTAAAAAACAAAAAGTGTATTAATGTATTTGTTCAGGAAAAGCTACATACC
3201 GAAGGGCTTTTGTATATGAATTCTGTGGTGGGGAGACCCATTTGTAATCTATATGGCAGTTCCATCTGGGTTTTAAGTTT
3281 AGATTTCACCGTGTCTTAGTGCTTCATTCTATTGGTTTATTGGAACATGTAATAAATAGGAGTAGTGATGTATTAAAACA
3361 CAAGTATTCATTAATGTTTTATATCTTCACTAAAATTCTATAGTTATGAAACTATCAATCAAGGTGTTATATTTCAGTCA
3441 GAAGTGAAAATTTATGAAGAGTATTTGGAAGTGTGTACAGAAATAAACTAGACTTACAGGTAGGCTAGATCAGAACGTTA
3521 ACATATGAACCTGCAGAAATCTGGTAAGACTTAAATTCAGTGTGAGGAATAACTCTAGTTCTCTCCTATGAGCATTTCCT
3601 AAAAGCCATCTGATTTGGCATTCTTACTGGAGCTGCAGACAGAAATCTACAAAGACAAAAGTAAACAAAATTAAGTTATT
3681 ATTCCACTGTTAGGAATGGAAATAAACTTGTGAAGTCTGTTTATTTTGAAGTATTGGTGAACTAGGCTTGCTAATTGATA
3761 ACTGCAGCAGTTTGTGTTTACTCCAGTTCATCAGCTTAGGTCATTTGAAAGATATAAGAGCTTAAGGCAAGAAAGAAATA
3841 ACATGGAATTCTATTTGAAGGACAACAGAACATTCTTGGAAAAGCAGCTCCAGTTGGTTTTTCAACTGTCAAACTTGAAT
3921 GTGTAAGTCCCCACAGAGCATGGACAGTCGGTGCAGAGTTCCAAGGAAACAATTATTGCCTGATGACCACTTCCATTTTG
4001 TATACACTCTTTGGTTCGTATAGGCCATATTCCAACTGGCTTTTTAGTAATAGAAATCCAGTATATAATGTATCAAATAC
4081 AATTGAGGTTCTAACCTAGTGTGTTAATTTATCTGAATTTGGATTTTTAAAAAGTAATAAAAAGTTAAATGTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acgacaAUCGGGAUCGGGGcgu 5'
                ||| ::||||:||   
Target 5' cacaaaTAG-TTTAGCTCCcta 3'
2507 - 2527 103.00 -11.30
2
miRNA  3' acgacAAUCGGGAU--CGGGGCGu 5'
               |||  || |  |:|::|| 
Target 5' ccaccTTATACCAAATGTCTTGCa 3'
3091 - 3114 103.00 -11.80
3
miRNA  3' acgACAAUCGGG--AU-----CGGGGCGu 5'
             || || :|:  ||     | ||||: 
Target 5' ctaTGCTACTCTCATACAGGGGACCCGTa 3'
1374 - 1402 97.00 -14.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30540488 6 COSMIC
COSN24312085 23 COSMIC
COSN26252028 45 COSMIC
COSN24303564 78 COSMIC
COSN31481503 131 COSMIC
COSN28681928 154 COSMIC
COSN19733806 174 COSMIC
COSN30166378 184 COSMIC
COSN30726460 191 COSMIC
COSN28193635 204 COSMIC
COSN8727589 224 COSMIC
COSN7076414 241 COSMIC
COSN31585979 268 COSMIC
COSN31532697 281 COSMIC
COSN31542804 332 COSMIC
COSN31522800 336 COSMIC
COSN30025264 341 COSMIC
COSN27999171 391 COSMIC
COSN26572968 446 COSMIC
COSN20107459 526 COSMIC
COSN29979689 539 COSMIC
COSN30159543 554 COSMIC
COSN31608366 563 COSMIC
COSN31534726 711 COSMIC
COSN30544227 746 COSMIC
COSN31489943 843 COSMIC
COSN31517444 894 COSMIC
COSN10075946 988 COSMIC
COSN10075945 989 COSMIC
COSN10075944 1022 COSMIC
COSN16604913 1109 COSMIC
COSN31568865 1289 COSMIC
COSN31524125 1326 COSMIC
COSN20107454 1652 COSMIC
COSN20107453 1726 COSMIC
COSN5255473 1807 COSMIC
COSN1508251 1810 COSMIC
COSN8211954 2148 COSMIC
COSN26747851 2758 COSMIC
COSN10075943 3136 COSMIC
COSN20107447 3412 COSMIC
COSN20107452 3412 COSMIC
COSN16460143 3473 COSMIC
COSN23809617 3575 COSMIC
COSN15662842 3905 COSMIC
COSN5890307 3995 COSMIC
COSN27143098 4087 COSMIC
COSN5890306 4147 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs766148828 2 dbSNP
rs1259303023 3 dbSNP
rs1470164941 6 dbSNP
rs1213111542 7 dbSNP
rs1332830825 14 dbSNP
rs758224386 25 dbSNP
rs1382947149 26 dbSNP
rs1229172088 27 dbSNP
rs1372879605 28 dbSNP
rs201800061 29 dbSNP
rs557314363 31 dbSNP
rs761713465 35 dbSNP
rs766735419 41 dbSNP
rs776768343 43 dbSNP
rs764021902 45 dbSNP
rs760766331 46 dbSNP
rs775651475 47 dbSNP
rs1423970160 49 dbSNP
rs772322083 51 dbSNP
rs993952064 60 dbSNP
rs112328400 61 dbSNP
rs1447531624 68 dbSNP
rs912429088 71 dbSNP
rs547077983 74 dbSNP
rs192831420 77 dbSNP
rs567849089 78 dbSNP
rs878911754 78 dbSNP
rs1194440890 92 dbSNP
rs1275671110 93 dbSNP
rs1438918507 94 dbSNP
rs138917272 102 dbSNP
rs1240767679 103 dbSNP
rs974153607 105 dbSNP
rs867751570 109 dbSNP
rs1049739221 113 dbSNP
rs1474282640 115 dbSNP
rs1407924904 120 dbSNP
rs531152568 121 dbSNP
rs563830697 122 dbSNP
rs947342011 123 dbSNP
rs78610910 124 dbSNP
rs573138755 128 dbSNP
rs960432808 130 dbSNP
rs1035835170 131 dbSNP
rs770490217 133 dbSNP
rs1001634658 134 dbSNP
rs1326102646 135 dbSNP
rs923759820 140 dbSNP
rs982005121 145 dbSNP
rs1242596381 147 dbSNP
rs559724956 150 dbSNP
rs778296989 151 dbSNP
rs757062646 154 dbSNP
rs1462217643 155 dbSNP
rs1264042597 158 dbSNP
rs867159414 159 dbSNP
rs1444975171 167 dbSNP
rs1316080515 168 dbSNP
rs1373500988 185 dbSNP
rs1304606909 193 dbSNP
rs541048347 194 dbSNP
rs1225339691 200 dbSNP
rs1377626320 214 dbSNP
rs1053514968 221 dbSNP
rs944148864 235 dbSNP
rs912627122 238 dbSNP
rs1470972720 239 dbSNP
rs758936489 241 dbSNP
rs932437312 245 dbSNP
rs919748350 248 dbSNP
rs974055152 254 dbSNP
rs1320685689 255 dbSNP
rs573941942 267 dbSNP
rs1341462066 289 dbSNP
rs10762 292 dbSNP
rs1223291003 294 dbSNP
rs1281890750 301 dbSNP
rs1384510716 305 dbSNP
rs560022120 314 dbSNP
rs1233315385 315 dbSNP
rs188741919 324 dbSNP
rs12263129 328 dbSNP
rs992207657 329 dbSNP
rs960462252 331 dbSNP
rs1262009412 343 dbSNP
rs575843708 345 dbSNP
rs896937804 351 dbSNP
rs369559258 362 dbSNP
rs1270895554 366 dbSNP
rs1480749985 370 dbSNP
rs1041608155 375 dbSNP
rs1161807856 394 dbSNP
rs1363362455 401 dbSNP
rs1420836806 405 dbSNP
rs1008420178 409 dbSNP
rs1160450954 414 dbSNP
rs536576178 415 dbSNP
rs1181806850 426 dbSNP
rs74863523 428 dbSNP
rs970234836 431 dbSNP
rs1347908418 439 dbSNP
rs556954832 441 dbSNP
rs1011858744 448 dbSNP
rs1240567364 453 dbSNP
rs115320204 456 dbSNP
rs757852007 458 dbSNP
rs536705220 459 dbSNP
rs766487232 467 dbSNP
rs760599945 468 dbSNP
rs368500803 476 dbSNP
rs914540951 477 dbSNP
rs376986121 485 dbSNP
rs535123527 486 dbSNP
rs891221939 487 dbSNP
rs1242456674 494 dbSNP
rs1049871313 500 dbSNP
rs1243712020 510 dbSNP
rs1417360376 516 dbSNP
rs932718721 522 dbSNP
rs1384312504 524 dbSNP
rs1053143540 526 dbSNP
rs898353519 535 dbSNP
rs568022061 536 dbSNP
rs10715619 537 dbSNP
rs1357172488 537 dbSNP
rs1367915458 537 dbSNP
rs1392574583 537 dbSNP
rs397779076 537 dbSNP
rs928758382 552 dbSNP
rs1290969621 562 dbSNP
rs549707002 563 dbSNP
rs982337853 563 dbSNP
rs939968437 582 dbSNP
rs1365369028 583 dbSNP
rs1322034409 584 dbSNP
rs908434307 585 dbSNP
rs1249500742 597 dbSNP
rs991842455 601 dbSNP
rs183981087 602 dbSNP
rs926284585 604 dbSNP
rs1238943515 618 dbSNP
rs1369076995 620 dbSNP
rs1169905066 621 dbSNP
rs1181917153 627 dbSNP
rs1426954051 629 dbSNP
rs980529630 634 dbSNP
rs1264169770 636 dbSNP
rs967757125 637 dbSNP
rs1424719189 640 dbSNP
rs1195541924 649 dbSNP
rs1021806496 655 dbSNP
rs1026601435 657 dbSNP
rs1488464661 659 dbSNP
rs1267956615 660 dbSNP
rs1220074073 665 dbSNP
rs972466280 671 dbSNP
rs1449847905 674 dbSNP
rs961399280 674 dbSNP
rs1361517593 676 dbSNP
rs1379477214 676 dbSNP
rs990700138 680 dbSNP
rs764909125 682 dbSNP
rs1305378317 686 dbSNP
rs570306343 690 dbSNP
rs1219237806 691 dbSNP
rs1262448805 692 dbSNP
rs781313427 698 dbSNP
rs1201886403 706 dbSNP
rs1008473962 708 dbSNP
rs551980385 713 dbSNP
rs533499770 715 dbSNP
rs1011826888 717 dbSNP
rs760877457 720 dbSNP
rs1053509856 725 dbSNP
rs934705066 730 dbSNP
rs1407285185 736 dbSNP
rs754492043 739 dbSNP
rs1392161954 745 dbSNP
rs1429199856 747 dbSNP
rs907208384 748 dbSNP
rs1178033221 749 dbSNP
rs1045795120 750 dbSNP
rs142145428 750 dbSNP
rs1297649523 757 dbSNP
rs1460569358 763 dbSNP
rs1400388909 769 dbSNP
rs1374882687 772 dbSNP
rs1282516968 791 dbSNP
rs1028308288 797 dbSNP
rs996965244 799 dbSNP
rs1480234388 804 dbSNP
rs571010903 806 dbSNP
rs1215404222 826 dbSNP
rs990649866 836 dbSNP
rs1197084380 843 dbSNP
rs1489435322 843 dbSNP
rs1194882263 849 dbSNP
rs1453224537 862 dbSNP
rs1268031949 867 dbSNP
rs1415682546 871 dbSNP
rs1268777920 879 dbSNP
rs767652381 890 dbSNP
rs775964431 892 dbSNP
rs1173819994 894 dbSNP
rs1425334436 894 dbSNP
rs547839713 895 dbSNP
rs1156409072 900 dbSNP
rs939810573 908 dbSNP
rs1218802607 912 dbSNP
rs529272968 916 dbSNP
rs1406765931 917 dbSNP
rs961043085 917 dbSNP
rs972797172 917 dbSNP
rs1225773820 918 dbSNP
rs1056342523 923 dbSNP
rs1223294140 933 dbSNP
rs1332153392 946 dbSNP
rs1282370447 952 dbSNP
rs538889153 953 dbSNP
rs1019700538 956 dbSNP
rs939271257 957 dbSNP
rs1490000098 958 dbSNP
rs562074564 959 dbSNP
rs543354358 971 dbSNP
rs980374474 972 dbSNP
rs1469147158 974 dbSNP
rs1398641845 975 dbSNP
rs946486695 986 dbSNP
rs1381755379 987 dbSNP
rs1332139221 989 dbSNP
rs551526943 991 dbSNP
rs1406888311 992 dbSNP
rs1404238301 996 dbSNP
rs990339564 998 dbSNP
rs1478860583 1003 dbSNP
rs563967797 1003 dbSNP
rs1378022734 1004 dbSNP
rs138143171 1015 dbSNP
rs1306328025 1017 dbSNP
rs1441542348 1020 dbSNP
rs1277900308 1021 dbSNP
rs1028492968 1023 dbSNP
rs1417256237 1036 dbSNP
rs1011774361 1038 dbSNP
rs1239458470 1044 dbSNP
rs1357659174 1046 dbSNP
rs1212040112 1054 dbSNP
rs893378078 1057 dbSNP
rs1437809041 1059 dbSNP
rs1031892185 1067 dbSNP
rs999533480 1073 dbSNP
rs1439907134 1074 dbSNP
rs564995639 1081 dbSNP
rs1460573879 1082 dbSNP
rs528648833 1083 dbSNP
rs779565886 1086 dbSNP
rs769699428 1102 dbSNP
rs1329383706 1108 dbSNP
rs1408208385 1108 dbSNP
rs1402482273 1109 dbSNP
rs948800300 1113 dbSNP
rs1336278458 1120 dbSNP
rs1338950369 1121 dbSNP
rs1247412040 1123 dbSNP
rs1346098635 1124 dbSNP
rs894604732 1127 dbSNP
rs1213387622 1128 dbSNP
rs1457766463 1129 dbSNP
rs1054866339 1130 dbSNP
rs931177058 1130 dbSNP
rs996828479 1131 dbSNP
rs1237440581 1137 dbSNP
rs919768254 1138 dbSNP
rs1241367795 1140 dbSNP
rs972636336 1142 dbSNP
rs1310073156 1146 dbSNP
rs1452071417 1153 dbSNP
rs962831901 1157 dbSNP
rs939939699 1161 dbSNP
rs759240954 1163 dbSNP
rs1380704387 1174 dbSNP
rs1017400569 1177 dbSNP
rs572174221 1182 dbSNP
rs1175858164 1187 dbSNP
rs571270129 1190 dbSNP
rs1004293288 1191 dbSNP
rs986502932 1201 dbSNP
rs1326156080 1209 dbSNP
rs953756053 1220 dbSNP
rs921041427 1223 dbSNP
rs1319240904 1228 dbSNP
rs1402575950 1229 dbSNP
rs191813017 1230 dbSNP
rs1451544865 1235 dbSNP
rs957501302 1236 dbSNP
rs1178686769 1245 dbSNP
rs1346671721 1246 dbSNP
rs574388535 1250 dbSNP
rs1200624569 1259 dbSNP
rs1260620935 1262 dbSNP
rs556190180 1279 dbSNP
rs1195605935 1291 dbSNP
rs1263790522 1307 dbSNP
rs1480092971 1318 dbSNP
rs1198783653 1325 dbSNP
rs187319947 1337 dbSNP
rs1467660038 1343 dbSNP
rs115823198 1344 dbSNP
rs1189108088 1345 dbSNP
rs1300483201 1352 dbSNP
rs770543673 1358 dbSNP
rs1044712630 1359 dbSNP
rs1442653727 1364 dbSNP
rs1404944677 1367 dbSNP
rs1299842334 1369 dbSNP
rs1283987619 1372 dbSNP
rs1233378919 1381 dbSNP
rs74151369 1386 dbSNP
rs1351120646 1387 dbSNP
rs539667361 1388 dbSNP
rs566217414 1393 dbSNP
rs894551119 1399 dbSNP
rs1132913 1400 dbSNP
rs879307900 1416 dbSNP
rs1132914 1419 dbSNP
rs1245931958 1426 dbSNP
rs898293052 1427 dbSNP
rs935075777 1428 dbSNP
rs1434937418 1429 dbSNP
rs1037305162 1434 dbSNP
rs561989373 1435 dbSNP
rs1363413361 1442 dbSNP
rs3194228 1444 dbSNP
rs1286045448 1445 dbSNP
rs1438106347 1447 dbSNP
rs1449018084 1468 dbSNP
rs1160812351 1469 dbSNP
rs1326142494 1472 dbSNP
rs1317338722 1475 dbSNP
rs939950296 1477 dbSNP
rs1420523995 1485 dbSNP
rs376007546 1486 dbSNP
rs3194234 1488 dbSNP
rs912493275 1503 dbSNP
rs1050735170 1508 dbSNP
rs1362239253 1509 dbSNP
rs1374196570 1512 dbSNP
rs924800634 1513 dbSNP
rs1159135643 1514 dbSNP
rs986939227 1520 dbSNP
rs955628838 1527 dbSNP
rs370350599 1529 dbSNP
rs35455018 1538 dbSNP
rs920948152 1539 dbSNP
rs975418582 1546 dbSNP
rs879401636 1549 dbSNP
rs989857610 1549 dbSNP
rs879651487 1552 dbSNP
rs748695326 1557 dbSNP
rs963068939 1563 dbSNP
rs1180674914 1570 dbSNP
rs759157637 1570 dbSNP
rs1016934640 1575 dbSNP
rs779272948 1603 dbSNP
rs1472919481 1604 dbSNP
rs1241198733 1610 dbSNP
rs1444342352 1610 dbSNP
rs531534995 1616 dbSNP
rs1190607824 1617 dbSNP
rs1297091270 1625 dbSNP
rs924798259 1628 dbSNP
rs1004730486 1631 dbSNP
rs200224880 1652 dbSNP
rs199818369 1654 dbSNP
rs36006955 1655 dbSNP
rs763104793 1655 dbSNP
rs201622858 1657 dbSNP
rs971655557 1673 dbSNP
rs564057677 1674 dbSNP
rs951467275 1675 dbSNP
rs1226535378 1677 dbSNP
rs1256086724 1687 dbSNP
rs958676697 1695 dbSNP
rs1292113214 1698 dbSNP
rs1483071155 1701 dbSNP
rs1027618831 1703 dbSNP
rs1258772681 1707 dbSNP
rs36049984 1709 dbSNP
rs994873583 1718 dbSNP
rs1170279376 1723 dbSNP
rs897944053 1723 dbSNP
rs1034834478 1732 dbSNP
rs1404857699 1737 dbSNP
rs1445441088 1746 dbSNP
rs182285856 1751 dbSNP
rs543804434 1762 dbSNP
rs572152275 1763 dbSNP
rs1379545271 1767 dbSNP
rs1381474524 1768 dbSNP
rs1276175247 1775 dbSNP
rs905126099 1780 dbSNP
rs1220724199 1782 dbSNP
rs1220513681 1792 dbSNP
rs533242178 1794 dbSNP
rs1044992949 1796 dbSNP
rs1298594948 1800 dbSNP
rs1404241857 1802 dbSNP
rs1258872985 1806 dbSNP
rs1311817743 1809 dbSNP
rs1156488 1810 dbSNP
rs1257986660 1815 dbSNP
rs893485325 1821 dbSNP
rs1405494553 1822 dbSNP
rs1261621486 1823 dbSNP
rs61858494 1824 dbSNP
rs1193746345 1826 dbSNP
rs1423923966 1832 dbSNP
rs574450252 1841 dbSNP
rs911622916 1844 dbSNP
rs920899517 1847 dbSNP
rs1478606735 1869 dbSNP
rs1054158906 1872 dbSNP
rs1342290276 1878 dbSNP
rs1400601214 1882 dbSNP
rs1282580368 1883 dbSNP
rs549840093 1888 dbSNP
rs35607419 1889 dbSNP
rs1051270554 1890 dbSNP
rs1217574262 1891 dbSNP
rs924381560 1897 dbSNP
rs934115989 1899 dbSNP
rs5787193 1900 dbSNP
rs1216300174 1905 dbSNP
rs921425335 1906 dbSNP
rs556226930 1914 dbSNP
rs976110452 1926 dbSNP
rs1217913873 1931 dbSNP
rs1249020897 1938 dbSNP
rs950234376 1944 dbSNP
rs1476729642 1951 dbSNP
rs537855687 1953 dbSNP
rs1192479778 1956 dbSNP
rs1222972796 1959 dbSNP
rs917435300 1964 dbSNP
rs962974742 1965 dbSNP
rs1438769203 1972 dbSNP
rs1156599778 1977 dbSNP
rs1362159515 1978 dbSNP
rs1437270442 1983 dbSNP
rs1420084978 1986 dbSNP
rs909905007 1993 dbSNP
rs991662806 2003 dbSNP
rs75605311 2009 dbSNP
rs1318939184 2017 dbSNP
rs1368563550 2022 dbSNP
rs951467896 2023 dbSNP
rs1278601319 2032 dbSNP
rs1307361918 2033 dbSNP
rs1222712085 2034 dbSNP
rs1365379642 2036 dbSNP
rs1356250568 2048 dbSNP
rs1241359205 2050 dbSNP
rs1276503083 2059 dbSNP
rs75127164 2063 dbSNP
rs1223122766 2068 dbSNP
rs973835343 2069 dbSNP
rs189962888 2076 dbSNP
rs188718156 2078 dbSNP
rs552682174 2081 dbSNP
rs982152769 2082 dbSNP
rs1176327835 2086 dbSNP
rs969230899 2087 dbSNP
rs1328761270 2097 dbSNP
rs1466861603 2098 dbSNP
rs1023404994 2099 dbSNP
rs1176137526 2102 dbSNP
rs1479635469 2106 dbSNP
rs1440021881 2112 dbSNP
rs1162483591 2116 dbSNP
rs538851649 2117 dbSNP
rs1008999446 2132 dbSNP
rs1325590284 2134 dbSNP
rs770319832 2134 dbSNP
rs1044022 2136 dbSNP
rs1395233152 2137 dbSNP
rs893693789 2139 dbSNP
rs1446133284 2140 dbSNP
rs1192211423 2147 dbSNP
rs554341911 2165 dbSNP
rs1379462288 2175 dbSNP
rs1447947335 2178 dbSNP
rs1284048579 2179 dbSNP
rs879038830 2184 dbSNP
rs374195342 2196 dbSNP
rs1291226849 2202 dbSNP
rs999162630 2208 dbSNP
rs1316700628 2211 dbSNP
rs535603323 2212 dbSNP
rs1470083556 2213 dbSNP
rs890219697 2218 dbSNP
rs1051546077 2219 dbSNP
rs1239593751 2222 dbSNP
rs1457964986 2224 dbSNP
rs1186566968 2225 dbSNP
rs201698207 2226 dbSNP
rs1180658728 2243 dbSNP
rs1473661789 2246 dbSNP
rs1163700155 2247 dbSNP
rs549831417 2250 dbSNP
rs1465152290 2264 dbSNP
rs1262807165 2271 dbSNP
rs1402723191 2272 dbSNP
rs1410802884 2283 dbSNP
rs1333774925 2287 dbSNP
rs150353338 2288 dbSNP
rs879492476 2291 dbSNP
rs910094893 2297 dbSNP
rs1216214110 2300 dbSNP
rs1259500442 2304 dbSNP
rs1318147685 2312 dbSNP
rs1199469912 2326 dbSNP
rs935694770 2327 dbSNP
rs1443887399 2336 dbSNP
rs377154176 2346 dbSNP
rs1219729419 2347 dbSNP
rs570468172 2361 dbSNP
rs1208037014 2371 dbSNP
rs902861185 2373 dbSNP
rs1041836997 2374 dbSNP
rs756426381 2386 dbSNP
rs1191580168 2395 dbSNP
rs1306421237 2399 dbSNP
rs1462569335 2404 dbSNP
rs949832801 2421 dbSNP
rs927963455 2423 dbSNP
rs1313909638 2427 dbSNP
rs1377028076 2432 dbSNP
rs1360438713 2433 dbSNP
rs1398758382 2437 dbSNP
rs1335620386 2447 dbSNP
rs1326434200 2464 dbSNP
rs1464231870 2464 dbSNP
rs1272696540 2465 dbSNP
rs1346735306 2467 dbSNP
rs1361202809 2473 dbSNP
rs12262056 2474 dbSNP
rs937575756 2480 dbSNP
rs1429151787 2486 dbSNP
rs370648153 2486 dbSNP
rs751702639 2486 dbSNP
rs920874066 2486 dbSNP
rs1400631706 2498 dbSNP
rs969430540 2500 dbSNP
rs1023901275 2502 dbSNP
rs1174636794 2502 dbSNP
rs1479164676 2502 dbSNP
rs962328343 2515 dbSNP
rs1440341410 2518 dbSNP
rs1242614448 2525 dbSNP
rs1014927757 2526 dbSNP
rs1321092016 2527 dbSNP
rs184116342 2528 dbSNP
rs767707779 2529 dbSNP
rs191477099 2533 dbSNP
rs752739507 2538 dbSNP
rs1351187101 2541 dbSNP
rs1316250929 2557 dbSNP
rs765064703 2558 dbSNP
rs774363060 2559 dbSNP
rs541990392 2560 dbSNP
rs143200530 2562 dbSNP
rs996708846 2563 dbSNP
rs1283741688 2570 dbSNP
rs899740567 2589 dbSNP
rs1265423554 2592 dbSNP
rs118189056 2596 dbSNP
rs890165310 2603 dbSNP
rs1379948237 2608 dbSNP
rs562593929 2614 dbSNP
rs1336830196 2620 dbSNP
rs1353708617 2620 dbSNP
rs79926138 2621 dbSNP
rs370398433 2624 dbSNP
rs995956042 2640 dbSNP
rs1457895594 2648 dbSNP
rs900224707 2651 dbSNP
rs1040278020 2656 dbSNP
rs1041391449 2664 dbSNP
rs941504434 2665 dbSNP
rs888604265 2673 dbSNP
rs759416150 2678 dbSNP
rs1273646745 2688 dbSNP
rs1359051690 2692 dbSNP
rs1047348773 2701 dbSNP
rs1055875779 2707 dbSNP
rs930207995 2723 dbSNP
rs1420852541 2736 dbSNP
rs937480921 2739 dbSNP
rs927995961 2740 dbSNP
rs140475589 2742 dbSNP
rs982048266 2743 dbSNP
rs558576247 2752 dbSNP
rs940958710 2764 dbSNP
rs151277478 2771 dbSNP
rs573886938 2775 dbSNP
rs556634942 2783 dbSNP
rs1456663717 2789 dbSNP
rs1179308389 2805 dbSNP
rs572678180 2811 dbSNP
rs916632743 2816 dbSNP
rs1251619696 2818 dbSNP
rs1423602755 2819 dbSNP
rs1186003378 2823 dbSNP
rs1370729039 2824 dbSNP
rs1461490174 2826 dbSNP
rs1169386358 2827 dbSNP
rs11188813 2830 dbSNP
rs954759575 2841 dbSNP
rs922041913 2850 dbSNP
rs974838283 2862 dbSNP
rs957931650 2863 dbSNP
rs1394103232 2865 dbSNP
rs963848697 2869 dbSNP
rs1356063132 2871 dbSNP
rs923767761 2874 dbSNP
rs1032849590 2876 dbSNP
rs1485401312 2877 dbSNP
rs1260765422 2888 dbSNP
rs536062464 2889 dbSNP
rs1488608166 2894 dbSNP
rs978028764 2897 dbSNP
rs10882809 2898 dbSNP
rs1030017029 2900 dbSNP
rs1242029664 2900 dbSNP
rs1252143620 2902 dbSNP
rs1020351240 2914 dbSNP
rs1013903471 2915 dbSNP
rs556244393 2925 dbSNP
rs537909800 2926 dbSNP
rs1016048710 2931 dbSNP
rs760336956 2934 dbSNP
rs1420756354 2937 dbSNP
rs570557293 2939 dbSNP
rs1001240519 2948 dbSNP
rs879063707 2949 dbSNP
rs1358241523 2950 dbSNP
rs557412442 2957 dbSNP
rs1304412491 2960 dbSNP
rs552520220 2966 dbSNP
rs9093 2967 dbSNP
rs1276232622 2968 dbSNP
rs1365554664 2970 dbSNP
rs1216427426 2972 dbSNP
rs186990826 2973 dbSNP
rs770676473 2974 dbSNP
rs1296539240 2982 dbSNP
rs1311873738 2987 dbSNP
rs1208459733 2989 dbSNP
rs1282982202 2993 dbSNP
rs1486208992 3000 dbSNP
rs1216435562 3018 dbSNP
rs1261694181 3022 dbSNP
rs1291839550 3024 dbSNP
rs940939200 3025 dbSNP
rs1186646515 3032 dbSNP
rs908144401 3035 dbSNP
rs142269457 3042 dbSNP
rs548157633 3049 dbSNP
rs1053915225 3052 dbSNP
rs1169930464 3054 dbSNP
rs1395385647 3066 dbSNP
rs1418901467 3075 dbSNP
rs1296218574 3076 dbSNP
rs1362437574 3089 dbSNP
rs1432942257 3090 dbSNP
rs529916837 3102 dbSNP
rs1367152538 3104 dbSNP
rs921946887 3105 dbSNP
rs923827733 3109 dbSNP
rs1348995197 3111 dbSNP
rs56755738 3117 dbSNP
rs544361347 3120 dbSNP
rs923147595 3126 dbSNP
rs974786017 3129 dbSNP
rs1245566375 3132 dbSNP
rs958118022 3133 dbSNP
rs369477840 3135 dbSNP
rs1253265071 3139 dbSNP
rs1438831284 3146 dbSNP
rs974648513 3147 dbSNP
rs1478087987 3148 dbSNP
rs1410067047 3150 dbSNP
rs182401603 3152 dbSNP
rs1016322585 3155 dbSNP
rs1349300534 3157 dbSNP
rs1438838591 3158 dbSNP
rs755065329 3158 dbSNP
rs1328113178 3162 dbSNP
rs530382500 3162 dbSNP
rs1446464742 3163 dbSNP
rs572716422 3164 dbSNP
rs967686009 3170 dbSNP
rs1489152003 3183 dbSNP
rs554472876 3189 dbSNP
rs1044029 3197 dbSNP
rs1224762791 3200 dbSNP
rs1203360526 3201 dbSNP
rs149151312 3210 dbSNP
rs190081616 3214 dbSNP
rs1319353018 3216 dbSNP
rs1215078332 3223 dbSNP
rs1273395776 3224 dbSNP
rs1457095947 3225 dbSNP
rs1176534987 3230 dbSNP
rs1234334188 3237 dbSNP
rs1470391453 3244 dbSNP
rs994255407 3251 dbSNP
rs1181166940 3257 dbSNP
rs1411560230 3262 dbSNP
rs959657548 3265 dbSNP
rs537975604 3290 dbSNP
rs185573887 3291 dbSNP
rs1395485084 3299 dbSNP
rs1046664550 3309 dbSNP
rs180775918 3310 dbSNP
rs780579403 3311 dbSNP
rs146629808 3312 dbSNP
rs1443413843 3314 dbSNP
rs1284102527 3315 dbSNP
rs1377681192 3326 dbSNP
rs1299773688 3330 dbSNP
rs1389044816 3334 dbSNP
rs898953271 3335 dbSNP
rs1391462203 3339 dbSNP
rs529515965 3340 dbSNP
rs1438134087 3343 dbSNP
rs1209221176 3344 dbSNP
rs1038258855 3348 dbSNP
rs1297736504 3350 dbSNP
rs1464262081 3361 dbSNP
rs1166323236 3363 dbSNP
rs895171529 3366 dbSNP
rs1398971756 3369 dbSNP
rs1410853767 3373 dbSNP
rs1005082227 3386 dbSNP
rs1402783762 3388 dbSNP
rs1417105054 3390 dbSNP
rs886621722 3394 dbSNP
rs1051993214 3400 dbSNP
rs1339223307 3402 dbSNP
rs1224637710 3407 dbSNP
rs1172529305 3412 dbSNP
rs10687669 3413 dbSNP
rs371717525 3414 dbSNP
rs3034738 3416 dbSNP
rs372764762 3416 dbSNP
rs139584151 3417 dbSNP
rs1211458143 3424 dbSNP
rs1262415844 3431 dbSNP
rs1376889063 3433 dbSNP
rs1487992078 3443 dbSNP
rs933563286 3449 dbSNP
rs1375001400 3451 dbSNP
rs566706161 3453 dbSNP
rs1196575815 3454 dbSNP
rs752672607 3454 dbSNP
rs756479292 3456 dbSNP
rs900471445 3460 dbSNP
rs1054186329 3461 dbSNP
rs1434895556 3471 dbSNP
rs1313964035 3483 dbSNP
rs746157664 3488 dbSNP
rs781554410 3490 dbSNP
rs1379995144 3492 dbSNP
rs923999049 3501 dbSNP
rs1177509984 3503 dbSNP
rs1319795012 3505 dbSNP
rs1326641731 3508 dbSNP
rs1435235110 3511 dbSNP
rs1300848065 3513 dbSNP
rs34388029 3515 dbSNP
rs549874660 3516 dbSNP
rs1042251051 3517 dbSNP
rs1039089802 3523 dbSNP
rs758998166 3527 dbSNP
rs933172541 3544 dbSNP
rs1203456052 3547 dbSNP
rs1259531916 3553 dbSNP
rs1198915405 3562 dbSNP
rs923095068 3563 dbSNP
rs1323187127 3565 dbSNP
rs1254637366 3567 dbSNP
rs369017621 3575 dbSNP
rs1332249481 3585 dbSNP
rs1455836015 3587 dbSNP
rs974679619 3588 dbSNP
rs1391086570 3589 dbSNP
rs758369161 3592 dbSNP
rs751562692 3594 dbSNP
rs144545344 3598 dbSNP
rs1385756721 3608 dbSNP
rs1332251436 3612 dbSNP
rs1372777253 3616 dbSNP
rs533347943 3621 dbSNP
rs1308339923 3622 dbSNP
rs374766543 3640 dbSNP
rs375690097 3644 dbSNP
rs576806031 3644 dbSNP
rs139767404 3670 dbSNP
rs1351427120 3671 dbSNP
rs569119004 3678 dbSNP
rs1271471216 3679 dbSNP
rs189511431 3680 dbSNP
rs532281404 3686 dbSNP
rs565007500 3689 dbSNP
rs1194639829 3694 dbSNP
rs1157994187 3696 dbSNP
rs963447267 3699 dbSNP
rs1417709439 3703 dbSNP
rs1437231810 3707 dbSNP
rs981149396 3712 dbSNP
rs368524083 3715 dbSNP
rs1015988357 3728 dbSNP
rs1239467893 3737 dbSNP
rs146838772 3744 dbSNP
rs1364929301 3745 dbSNP
rs546350562 3753 dbSNP
rs528094513 3754 dbSNP
rs1441552534 3769 dbSNP
rs867476873 3770 dbSNP
rs1030512857 3778 dbSNP
rs1461587834 3798 dbSNP
rs997760566 3803 dbSNP
rs187066950 3814 dbSNP
rs1202596108 3815 dbSNP
rs1392938796 3815 dbSNP
rs77910679 3819 dbSNP
rs1039039807 3829 dbSNP
rs936656014 3832 dbSNP
rs1238650715 3839 dbSNP
rs1355862255 3840 dbSNP
rs574768632 3845 dbSNP
rs753721059 3853 dbSNP
rs75048782 3855 dbSNP
rs1452184709 3858 dbSNP
rs766169826 3863 dbSNP
rs1197968765 3874 dbSNP
rs1338965401 3875 dbSNP
rs760461538 3886 dbSNP
rs902506820 3891 dbSNP
rs1475201628 3892 dbSNP
rs945458666 3902 dbSNP
rs3689 3905 dbSNP
rs1475269498 3906 dbSNP
rs1397508295 3910 dbSNP
rs1352447554 3914 dbSNP
rs1463299465 3921 dbSNP
rs1402681172 3923 dbSNP
rs933371850 3930 dbSNP
rs1401389827 3934 dbSNP
rs992658136 3942 dbSNP
rs544415198 3949 dbSNP
rs1357403881 3950 dbSNP
rs1417797643 3952 dbSNP
rs7902934 3953 dbSNP
rs1038857364 3955 dbSNP
rs1295088230 3957 dbSNP
rs1306052410 3961 dbSNP
rs761483901 3963 dbSNP
rs943318778 3967 dbSNP
rs909082779 3970 dbSNP
rs1472244699 3971 dbSNP
rs984479604 3972 dbSNP
rs927243942 3974 dbSNP
rs559011632 3976 dbSNP
rs1485697967 3978 dbSNP
rs751072907 3987 dbSNP
rs963055869 3987 dbSNP
rs1443316687 3989 dbSNP
rs559546023 4002 dbSNP
rs1262928301 4003 dbSNP
rs1429989777 4007 dbSNP
rs1170724267 4013 dbSNP
rs1376788411 4017 dbSNP
rs1016348671 4018 dbSNP
rs1175383689 4026 dbSNP
rs983188540 4032 dbSNP
rs533997278 4035 dbSNP
rs1288426593 4039 dbSNP
rs573228231 4046 dbSNP
rs60367815 4046 dbSNP
rs1384073989 4051 dbSNP
rs1347553914 4060 dbSNP
rs1232626328 4061 dbSNP
rs981181861 4063 dbSNP
rs1349314395 4065 dbSNP
rs554661482 4069 dbSNP
rs149825879 4074 dbSNP
rs182403980 4087 dbSNP
rs753364457 4088 dbSNP
rs1186704051 4091 dbSNP
rs1252014780 4099 dbSNP
rs964886455 4100 dbSNP
rs1017846658 4104 dbSNP
rs991374447 4104 dbSNP
rs1001526995 4111 dbSNP
rs959653829 4117 dbSNP
rs771644342 4121 dbSNP
rs375113720 4122 dbSNP
rs1355787809 4129 dbSNP
rs1289648248 4147 dbSNP
rs1370576987 4154 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site CDS
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acgacaauCGGGAUCGGGGCGu 5'
                  ||: | |||:||: 
Target 5' -----aatGCTGT-GCCTCGTc 3'
1 - 16
Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.747 7.7e-5 0.815 6.0e-6 20 Click to see details
GSE28260 Renal cortex and medulla 0.573 2.0e-2 0.698 4.0e-3 13 Click to see details
GSE21032 Prostate cancer 0.211 2.8e-2 0.249 1.2e-2 83 Click to see details
GSE19350 CNS germ cell tumors 0.464 6.4e-2 0.315 1.6e-1 12 Click to see details
GSE28544 Breast cancer 0.302 7.6e-2 0.520 4.6e-3 24 Click to see details
GSE42095 Differentiated embryonic stem cells 0.285 9.4e-2 0.322 6.7e-2 23 Click to see details
GSE17498 Multiple myeloma -0.13 2.1e-1 0.041 4.0e-1 40 Click to see details
GSE26953 Aortic valvular endothelial cells -0.156 2.3e-1 -0.255 1.1e-1 24 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.148 2.4e-1 0.027 4.5e-1 25 Click to see details
GSE19536 Breast cancer 0.066 2.6e-1 0.101 1.6e-1 100 Click to see details
GSE32688 Pancreatic cancer -0.105 2.8e-1 0.025 4.5e-1 32 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.164 3.4e-1 -0.100 4.0e-1 9 Click to see details
GSE19783 ER- ER- breast cancer 0.046 3.4e-1 0.050 3.3e-1 79 Click to see details
GSE38226 Liver fibrosis 0.076 3.7e-1 0.088 3.5e-1 21 Click to see details
GSE35602 Colorectal cancer stromal tissue 0.057 3.9e-1 0.120 2.8e-1 25 Click to see details
GSE21687 Ependynoma primary tumors 0.033 4.0e-1 0.051 3.4e-1 64 Click to see details
GSE19783 ER+ ER+ breast cancer 0.033 4.5e-1 0.254 1.4e-1 20 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
COAD 0.703 0.03 0.738 0.02 8 Click to see details
LUSC -0.263 0.06 -0.201 0.11 38 Click to see details
KIRC -0.139 0.13 -0.161 0.09 68 Click to see details
BRCA 0.116 0.15 0.113 0.15 84 Click to see details
HNSC 0.166 0.15 0.226 0.08 42 Click to see details
KIRP -0.19 0.15 -0.217 0.12 32 Click to see details
LIHC -0.121 0.2 -0.052 0.36 49 Click to see details
PAAD -0.551 0.22 -0.600 0.2 4 Click to see details
ESCA -0.249 0.23 -0.127 0.35 11 Click to see details
CESC -0.694 0.26 -0.500 0.33 3 Click to see details
THCA 0.068 0.3 0.087 0.26 59 Click to see details
PRAD -0.063 0.33 -0.046 0.38 50 Click to see details
KICH 0.091 0.33 0.068 0.37 25 Click to see details
CHOL 0.114 0.39 -0.017 0.48 9 Click to see details
UCEC 0.067 0.39 0.226 0.18 19 Click to see details
BLCA 0.053 0.42 0.059 0.41 18 Click to see details
LUAD 0.057 0.43 0.315 0.16 12 Click to see details
PCPG 0.005 0.5 -0.500 0.33 3 Click to see details
PCPG 0.005 0.5 -0.500 0.33 3 Click to see details
STAD 0 0.5 0.027 0.44 32 Click to see details
STAD 0 0.5 0.027 0.44 32 Click to see details
412 hsa-miR-744-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT016085 ARL15 ADP ribosylation factor like GTPase 15 1 1
MIRT016086 AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 1 2
MIRT016087 PPTC7 PTC7 protein phosphatase homolog 2 3
MIRT016088 RASSF1 Ras association domain family member 1 1 1
MIRT016089 IER5 immediate early response 5 1 1
MIRT037383 UFC1 ubiquitin-fold modifier conjugating enzyme 1 1 1
MIRT037384 STAM2 signal transducing adaptor molecule 2 1 1
MIRT037385 SRRM2 serine/arginine repetitive matrix 2 1 1
MIRT037386 DCXR dicarbonyl and L-xylulose reductase 1 1
MIRT037387 TSPAN17 tetraspanin 17 1 1
MIRT037388 ACTB actin beta 1 1
MIRT037389 HIST1H2BC histone cluster 1 H2B family member c 1 1
MIRT037390 ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 1 1
MIRT037391 VDAC1 voltage dependent anion channel 1 1 1
MIRT037392 RNASEK ribonuclease K 1 1
MIRT037393 CDK16 cyclin dependent kinase 16 1 1
MIRT037394 ZCCHC24 zinc finger CCHC-type containing 24 1 1
MIRT037395 ARRDC2 arrestin domain containing 2 1 1
MIRT037396 SGMS1 sphingomyelin synthase 1 1 1
MIRT037397 HSPD1 heat shock protein family D (Hsp60) member 1 1 1
MIRT037398 MRPL46 mitochondrial ribosomal protein L46 1 1
MIRT037399 RHEB Ras homolog, mTORC1 binding 1 1
MIRT037400 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT037401 TP53I13 tumor protein p53 inducible protein 13 1 1
MIRT037402 CD44 CD44 molecule (Indian blood group) 1 1
MIRT037403 USP12 ubiquitin specific peptidase 12 1 1
MIRT037404 AP2B1 adaptor related protein complex 2 beta 1 subunit 1 1
MIRT037405 RPL18A ribosomal protein L18a 1 1
MIRT037406 PPP1CA protein phosphatase 1 catalytic subunit alpha 1 1
MIRT037407 TNRC6B trinucleotide repeat containing 6B 1 1
MIRT037408 PXK PX domain containing serine/threonine kinase like 1 1
MIRT037409 TDRKH tudor and KH domain containing 1 1
MIRT037410 PRRC2A proline rich coiled-coil 2A 1 1
MIRT037411 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT037412 NDE1 nudE neurodevelopment protein 1 1 1
MIRT037413 STK16 serine/threonine kinase 16 1 1
MIRT037414 PSMB2 proteasome subunit beta 2 1 1
MIRT037415 EPN1 epsin 1 1 1
MIRT037416 EN2 engrailed homeobox 2 1 1
MIRT037417 LARP1 La ribonucleoprotein domain family member 1 1 1
MIRT037418 SRCAP Snf2 related CREBBP activator protein 1 1
MIRT037419 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 1 1
MIRT037420 AP2A2 adaptor related protein complex 2 alpha 2 subunit 1 1
MIRT037421 ACTG1 actin gamma 1 1 1
MIRT037422 PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing 1 1
MIRT037423 UBE2O ubiquitin conjugating enzyme E2 O 1 1
MIRT037424 KLHL15 kelch like family member 15 1 1
MIRT037425 SECISBP2 SECIS binding protein 2 1 1
MIRT037426 KIAA0922 transmembrane 131 like 1 1
MIRT037427 PTMA prothymosin, alpha 1 1
MIRT037428 WDR45B WD repeat domain 45B 1 1
MIRT037429 ZNF282 zinc finger protein 282 1 1
MIRT037430 GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 1 1
MIRT037431 TNKS tankyrase 1 1
MIRT037432 NOP2 NOP2 nucleolar protein 1 1
MIRT037433 GAK cyclin G associated kinase 1 1
MIRT037434 ATP6 ATP synthase F0 subunit 6 1 1
MIRT037435 DIDO1 death inducer-obliterator 1 1 1
MIRT037436 RPL3 ribosomal protein L3 1 1
MIRT037437 AIMP2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 1 1
MIRT037438 PIGC phosphatidylinositol glycan anchor biosynthesis class C 1 1
MIRT037439 ARHGEF2 Rho/Rac guanine nucleotide exchange factor 2 1 1
MIRT037440 USP21 ubiquitin specific peptidase 21 1 1
MIRT037441 NUFIP2 NUFIP2, FMR1 interacting protein 2 1 1
MIRT037442 RPS6 ribosomal protein S6 1 1
MIRT037443 ILKAP ILK associated serine/threonine phosphatase 1 1
MIRT037444 COX1 cytochrome c oxidase subunit I 1 1
MIRT037445 VPS37C VPS37C, ESCRT-I subunit 1 1
MIRT037446 CDK12 cyclin dependent kinase 12 1 1
MIRT037447 RBM8A RNA binding motif protein 8A 1 1
MIRT037448 CKB creatine kinase B 1 1
MIRT037449 DHX57 DExH-box helicase 57 1 1
MIRT037450 DDX23 DEAD-box helicase 23 1 1
MIRT037451 ABI3 ABI family member 3 1 1
MIRT037452 GATAD2B GATA zinc finger domain containing 2B 1 1
MIRT037453 PDPK1 3-phosphoinositide dependent protein kinase 1 1 1
MIRT037454 C17orf70 Fanconi anemia core complex associated protein 100 1 1
MIRT037455 SKI SKI proto-oncogene 1 1
MIRT037456 KCTD11 potassium channel tetramerization domain containing 11 1 1
MIRT037457 GNB2L1 receptor for activated C kinase 1 1 1
MIRT037458 NCOA3 nuclear receptor coactivator 3 1 1
MIRT037459 PAK4 p21 (RAC1) activated kinase 4 2 3
MIRT037460 GDI2 GDP dissociation inhibitor 2 1 1
MIRT037461 SLC2A4RG SLC2A4 regulator 1 1
MIRT037462 SLX4 SLX4 structure-specific endonuclease subunit 1 1
MIRT037463 COPA coatomer protein complex subunit alpha 1 1
MIRT037464 GPRASP2 G protein-coupled receptor associated sorting protein 2 1 1
MIRT037465 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 1 1
MIRT037466 LIMS1 LIM zinc finger domain containing 1 1 1
MIRT037467 COTL1 coactosin like F-actin binding protein 1 1 1
MIRT037468 CAPNS1 calpain small subunit 1 1 1
MIRT037469 FRZB frizzled-related protein 1 1
MIRT037470 UBQLN4 ubiquilin 4 1 1
MIRT037471 NUP153 nucleoporin 153 1 1
MIRT037472 TMEM175 transmembrane protein 175 1 1
MIRT037473 HIST1H2BD histone cluster 1 H2B family member d 1 1
MIRT037474 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT037475 BCL2L12 BCL2 like 12 1 1
MIRT037476 HIST2H2AA3 histone cluster 2 H2A family member a3 1 1
MIRT037477 MINK1 misshapen like kinase 1 1 1
MIRT037478 PDXK pyridoxal kinase 1 1
MIRT037479 FAM110A family with sequence similarity 110 member A 1 1
MIRT037480 ZNF598 zinc finger protein 598 1 1
MIRT037481 ILK integrin linked kinase 1 1
MIRT037482 HINT1 histidine triad nucleotide binding protein 1 1 1
MIRT037483 WBP2 WW domain binding protein 2 1 1
MIRT037484 CYTB cytochrome b 1 1
MIRT037485 SCAMP2 secretory carrier membrane protein 2 1 1
MIRT037486 TRIM33 tripartite motif containing 33 1 1
MIRT037487 SLC25A3 solute carrier family 25 member 3 1 1
MIRT037488 IRS4 insulin receptor substrate 4 1 1
MIRT037489 TSR1 TSR1, ribosome maturation factor 1 1
MIRT037490 TCOF1 treacle ribosome biogenesis factor 1 1 1
MIRT037491 ATXN2L ataxin 2 like 1 1
MIRT037492 MTOR mechanistic target of rapamycin kinase 1 1
MIRT037493 ZNF318 zinc finger protein 318 1 1
MIRT037494 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 3
MIRT037495 SAMD4B sterile alpha motif domain containing 4B 1 1
MIRT037496 STMN1 stathmin 1 1 1
MIRT037497 SAT1 spermidine/spermine N1-acetyltransferase 1 1 1
MIRT037498 SALL1 spalt like transcription factor 1 1 1
MIRT037499 ZSCAN18 zinc finger and SCAN domain containing 18 1 1
MIRT037500 SLC35D1 solute carrier family 35 member D1 1 1
MIRT037501 TM9SF3 transmembrane 9 superfamily member 3 1 1
MIRT037502 TIAM1 T-cell lymphoma invasion and metastasis 1 1 1
MIRT037503 CHD5 chromodomain helicase DNA binding protein 5 1 1
MIRT037504 BAG6 BCL2 associated athanogene 6 1 1
MIRT037505 MED28 mediator complex subunit 28 1 1
MIRT037506 ANKRD52 ankyrin repeat domain 52 1 1
MIRT037507 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 1 1
MIRT037508 PPDPF pancreatic progenitor cell differentiation and proliferation factor 1 1
MIRT037509 PRKACA protein kinase cAMP-activated catalytic subunit alpha 1 1
MIRT037510 HPCAL4 hippocalcin like 4 1 1
MIRT037511 ZNF256 zinc finger protein 256 1 1
MIRT037512 CGNL1 cingulin like 1 1 1
MIRT037513 TUBA1B tubulin alpha 1b 1 1
MIRT037514 LNPEP leucyl and cystinyl aminopeptidase 1 1
MIRT037515 PDE4A phosphodiesterase 4A 1 1
MIRT037516 HOXD11 homeobox D11 2 3
MIRT037517 QARS glutaminyl-tRNA synthetase 1 1
MIRT037518 G3BP1 G3BP stress granule assembly factor 1 1 1
MIRT037519 PLEKHM2 pleckstrin homology and RUN domain containing M2 1 1
MIRT037520 POLR2A RNA polymerase II subunit A 1 1
MIRT037521 KIAA1462 junctional cadherin 5 associated 1 1
MIRT037522 SF3A1 splicing factor 3a subunit 1 1 1
MIRT037523 YBX1 Y-box binding protein 1 1 1
MIRT037524 PTGES3 prostaglandin E synthase 3 1 1
MIRT037525 FOXO3 forkhead box O3 1 1
MIRT037526 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 1 1
MIRT037527 AARS alanyl-tRNA synthetase 1 1
MIRT037528 ZNF155 zinc finger protein 155 1 1
MIRT037529 NCS1 neuronal calcium sensor 1 1 1
MIRT037530 FKBP4 FK506 binding protein 4 1 1
MIRT037531 ARHGDIA Rho GDP dissociation inhibitor alpha 1 1
MIRT037532 MAPK7 mitogen-activated protein kinase 7 1 1
MIRT037533 AGPAT2 1-acylglycerol-3-phosphate O-acyltransferase 2 1 1
MIRT037534 HIST1H1E histone cluster 1 H1 family member e 1 1
MIRT037535 MLF2 myeloid leukemia factor 2 1 1
MIRT037536 EDC3 enhancer of mRNA decapping 3 1 1
MIRT037537 CHRAC1 chromatin accessibility complex 1 1 1
MIRT037538 WIPF3 WAS/WASL interacting protein family member 3 1 1
MIRT037539 COX2 cytochrome c oxidase subunit II 1 1
MIRT037540 SRSF1 serine and arginine rich splicing factor 1 1 1
MIRT037541 CTNNBIP1 catenin beta interacting protein 1 1 1
MIRT037542 RPL4 ribosomal protein L4 1 1
MIRT037543 COX3 cytochrome c oxidase III 1 1
MIRT037544 DDX54 DEAD-box helicase 54 1 1
MIRT037545 TOB2 transducer of ERBB2, 2 1 1
MIRT037546 MAN2C1 mannosidase alpha class 2C member 1 1 1
MIRT037547 SMCR7L mitochondrial elongation factor 1 1 1
MIRT037548 RPLP1 ribosomal protein lateral stalk subunit P1 1 1
MIRT037549 RAN RAN, member RAS oncogene family 1 1
MIRT037550 NONO non-POU domain containing octamer binding 1 1
MIRT037551 CYB5R3 cytochrome b5 reductase 3 1 1
MIRT037552 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 1 1
MIRT037553 COLGALT1 collagen beta(1-O)galactosyltransferase 1 1 1
MIRT037554 MGRN1 mahogunin ring finger 1 1 1
MIRT037555 ANAPC1 anaphase promoting complex subunit 1 1 1
MIRT037556 TBX1 T-box 1 1 1
MIRT037557 NXPH4 neurexophilin 4 1 1
MIRT037558 HSPA1B heat shock protein family A (Hsp70) member 1B 1 1
MIRT037559 UBE2A ubiquitin conjugating enzyme E2 A 1 1
MIRT037560 KPNB1 karyopherin subunit beta 1 1 1
MIRT037561 NDUFB10 NADH:ubiquinone oxidoreductase subunit B10 1 1
MIRT037562 SYMPK symplekin 1 1
MIRT037563 SYPL1 synaptophysin like 1 1 1
MIRT037564 LRP3 LDL receptor related protein 3 1 1
MIRT037565 DDX24 DEAD-box helicase 24 1 1
MIRT037566 WDR37 WD repeat domain 37 1 1
MIRT037567 RPS14 ribosomal protein S14 1 1
MIRT037568 FAM53C family with sequence similarity 53 member C 1 1
MIRT037569 NMT1 N-myristoyltransferase 1 1 1
MIRT037570 PAGR1 PAXIP1 associated glutamate rich protein 1 1 1
MIRT037571 AKT2 AKT serine/threonine kinase 2 1 1
MIRT037572 TMEM14C transmembrane protein 14C 1 1
MIRT037573 MEX3D mex-3 RNA binding family member D 1 1
MIRT037574 BRAF B-Raf proto-oncogene, serine/threonine kinase 1 1
MIRT037575 POLR2L RNA polymerase II subunit L 1 1
MIRT037576 SERP1 stress associated endoplasmic reticulum protein 1 1 1
MIRT037577 C8orf33 chromosome 8 open reading frame 33 1 1
MIRT037578 NR1D2 nuclear receptor subfamily 1 group D member 2 1 1
MIRT037579 POLD3 DNA polymerase delta 3, accessory subunit 1 1
MIRT037580 HMGA1 high mobility group AT-hook 1 1 1
MIRT037581 SLC35B4 solute carrier family 35 member B4 1 1
MIRT037582 PELP1 proline, glutamate and leucine rich protein 1 1 1
MIRT037583 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 1 1
MIRT037584 RPL7A ribosomal protein L7a 1 1
MIRT037585 LAIR1 leukocyte associated immunoglobulin like receptor 1 1 1
MIRT037586 RPL10 ribosomal protein L10 1 1
MIRT037587 MRPS16 mitochondrial ribosomal protein S16 1 1
MIRT037588 SRM spermidine synthase 1 1
MIRT037589 EIF3K eukaryotic translation initiation factor 3 subunit K 1 1
MIRT037590 DESI1 desumoylating isopeptidase 1 1 1
MIRT037591 BET1 Bet1 golgi vesicular membrane trafficking protein 1 1
MIRT037592 HTRA2 HtrA serine peptidase 2 1 1
MIRT037593 LARP6 La ribonucleoprotein domain family member 6 1 1
MIRT037594 NOTCH2 notch 2 1 1
MIRT037595 ADCY9 adenylate cyclase 9 1 1
MIRT037596 C6orf62 chromosome 6 open reading frame 62 1 1
MIRT037597 FBXL19 F-box and leucine rich repeat protein 19 1 1
MIRT037598 L3MBTL2 L3MBTL2, polycomb repressive complex 1 subunit 1 1
MIRT037599 TRIM28 tripartite motif containing 28 1 1
MIRT037600 LGALS3 galectin 3 1 1
MIRT037601 IGSF8 immunoglobulin superfamily member 8 1 1
MIRT037602 LIN37 lin-37 DREAM MuvB core complex component 1 1
MIRT037603 PTPRF protein tyrosine phosphatase, receptor type F 1 1
MIRT037604 MTSS1L MTSS1L, I-BAR domain containing 1 1
MIRT037605 TRMT2A tRNA methyltransferase 2 homolog A 1 1
MIRT037606 DVL1 dishevelled segment polarity protein 1 1 1
MIRT037607 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 1 1
MIRT037608 TOR2A torsin family 2 member A 1 1
MIRT037609 RPS6KA5 ribosomal protein S6 kinase A5 1 1
MIRT037610 SMYD4 SET and MYND domain containing 4 1 1
MIRT037611 TJAP1 tight junction associated protein 1 1 1
MIRT037612 IRAK1 interleukin 1 receptor associated kinase 1 1 1
MIRT037613 PPM1M protein phosphatase, Mg2+/Mn2+ dependent 1M 1 1
MIRT037614 EIF4A2 eukaryotic translation initiation factor 4A2 1 1
MIRT037615 GFER growth factor, augmenter of liver regeneration 1 1
MIRT037616 PKP2 plakophilin 2 1 1
MIRT037617 FARSB phenylalanyl-tRNA synthetase beta subunit 1 1
MIRT037618 OPRD1 opioid receptor delta 1 1 1
MIRT037619 CCNY cyclin Y 1 1
MIRT037620 CNOT1 CCR4-NOT transcription complex subunit 1 1 1
MIRT037621 CXCL16 C-X-C motif chemokine ligand 16 1 1
MIRT037622 CEBPA CCAAT/enhancer binding protein alpha 1 1
MIRT037623 DDX11 DEAD/H-box helicase 11 1 1
MIRT037624 URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) 1 1
MIRT037625 SBF1 SET binding factor 1 1 1
MIRT037626 GNB2 G protein subunit beta 2 1 1
MIRT037627 KMT2D lysine methyltransferase 2D 2 3
MIRT037628 DDX17 DEAD-box helicase 17 1 1
MIRT037629 SORBS3 sorbin and SH3 domain containing 3 1 1
MIRT037630 TAPBP TAP binding protein 1 1
MIRT037631 BCR BCR, RhoGEF and GTPase activating protein 1 1
MIRT037632 RPL18 ribosomal protein L18 1 1
MIRT037633 INTS3 integrator complex subunit 3 1 1
MIRT037634 CDC25B cell division cycle 25B 1 1
MIRT037635 LDOC1L retrotransposon Gag like 6 1 1
MIRT037636 TUB tubby bipartite transcription factor 1 1
MIRT037637 NUDT2 nudix hydrolase 2 1 1
MIRT037638 CDAN1 codanin 1 1 1
MIRT037639 MRS2 MRS2, magnesium transporter 1 1
MIRT037640 PYGB glycogen phosphorylase B 1 1
MIRT037641 LDLRAD3 low density lipoprotein receptor class A domain containing 3 1 1
MIRT037642 COL5A1 collagen type V alpha 1 chain 1 1
MIRT037643 ATF7IP activating transcription factor 7 interacting protein 1 1
MIRT037644 AGO1 argonaute 1, RISC catalytic component 1 1
MIRT037645 ZNF212 zinc finger protein 212 1 1
MIRT037646 TSC2 TSC complex subunit 2 1 1
MIRT037647 FASN fatty acid synthase 1 1
MIRT037648 NOL9 nucleolar protein 9 1 1
MIRT037649 CLUH clustered mitochondria homolog 1 1
MIRT037650 PHF8 PHD finger protein 8 1 1
MIRT037651 EIF4G1 eukaryotic translation initiation factor 4 gamma 1 1 1
MIRT037652 TRAPPC12 trafficking protein particle complex 12 1 1
MIRT037653 HOXC11 homeobox C11 1 1
MIRT037654 DGCR14 ess-2 splicing factor homolog 1 1
MIRT037655 SLC25A1 solute carrier family 25 member 1 1 1
MIRT037656 MEX3C mex-3 RNA binding family member C 1 1
MIRT037657 RAI1 retinoic acid induced 1 1 1
MIRT037658 LY6E lymphocyte antigen 6 family member E 1 1
MIRT037659 SEC16A SEC16 homolog A, endoplasmic reticulum export factor 1 1
MIRT037660 RPL37 ribosomal protein L37 1 1
MIRT037661 CNN2 calponin 2 1 1
MIRT037662 ALDH18A1 aldehyde dehydrogenase 18 family member A1 1 1
MIRT037663 POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 1 1
MIRT037664 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT037665 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 1 1
MIRT037666 PTPMT1 protein tyrosine phosphatase, mitochondrial 1 1 1
MIRT037667 NCEH1 neutral cholesterol ester hydrolase 1 1 1
MIRT037668 ART5 ADP-ribosyltransferase 5 1 1
MIRT037669 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT037670 NCL nucleolin 1 1
MIRT037671 NCKAP5L NCK associated protein 5 like 1 1
MIRT037672 ZCCHC14 zinc finger CCHC-type containing 14 1 1
MIRT037673 CCDC71 coiled-coil domain containing 71 1 1
MIRT037674 SURF4 surfeit 4 1 1
MIRT037675 RPL13 ribosomal protein L13 1 1
MIRT037676 ACTN4 actinin alpha 4 1 1
MIRT037677 PA2G4 proliferation-associated 2G4 1 1
MIRT037678 MIF macrophage migration inhibitory factor 1 1
MIRT037679 UBE2N ubiquitin conjugating enzyme E2 N 1 1
MIRT037680 LYNX1 Ly6/neurotoxin 1 1 1
MIRT037681 TACC3 transforming acidic coiled-coil containing protein 3 1 1
MIRT037682 GSR glutathione-disulfide reductase 1 1
MIRT037683 GSK3A glycogen synthase kinase 3 alpha 1 1
MIRT037684 ZMYM3 zinc finger MYM-type containing 3 1 1
MIRT037685 ERP29 endoplasmic reticulum protein 29 1 1
MIRT037686 MATR3 matrin 3 1 1
MIRT037687 FANCG Fanconi anemia complementation group G 1 1
MIRT037688 FAM83G family with sequence similarity 83 member G 1 1
MIRT037689 DUSP18 dual specificity phosphatase 18 1 1
MIRT037690 MYC MYC proto-oncogene, bHLH transcription factor 3 2
MIRT037691 TSPAN7 tetraspanin 7 1 1
MIRT037692 ATMIN ATM interactor 1 1
MIRT037693 SEPT2 septin 2 1 1
MIRT037694 FOXRED2 FAD dependent oxidoreductase domain containing 2 1 1
MIRT037695 TECR trans-2,3-enoyl-CoA reductase 1 1
MIRT037696 MRPL11 mitochondrial ribosomal protein L11 1 1
MIRT037697 IP6K1 inositol hexakisphosphate kinase 1 1 1
MIRT037698 PSMD4 proteasome 26S subunit, non-ATPase 4 1 1
MIRT037699 SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 1 1
MIRT037700 CTNNB1 catenin beta 1 1 1
MIRT037701 TMEM189 transmembrane protein 189 1 1
MIRT037702 LDLR low density lipoprotein receptor 1 1
MIRT037703 OGFR opioid growth factor receptor 1 1
MIRT037704 ADAP2 ArfGAP with dual PH domains 2 1 1
MIRT037705 LIPA lipase A, lysosomal acid type 1 1
MIRT037706 SNAPC4 small nuclear RNA activating complex polypeptide 4 1 1
MIRT037707 FBN2 fibrillin 2 1 1
MIRT037708 ZNF704 zinc finger protein 704 1 1
MIRT037709 EIF3M eukaryotic translation initiation factor 3 subunit M 1 1
MIRT037710 SMC1A structural maintenance of chromosomes 1A 1 1
MIRT037711 FZR1 fizzy and cell division cycle 20 related 1 1 1
MIRT037712 NANOS1 nanos C2HC-type zinc finger 1 1 1
MIRT037713 PRR12 proline rich 12 1 1
MIRT037714 PHC2 polyhomeotic homolog 2 1 1
MIRT037715 NOP9 NOP9 nucleolar protein 1 1
MIRT037716 HM13 histocompatibility minor 13 1 1
MIRT037717 PRDX5 peroxiredoxin 5 1 1
MIRT037718 IRGQ immunity related GTPase Q 1 1
MIRT037719 TGFB1 transforming growth factor beta 1 7 2
MIRT037720 MARCH3 membrane associated ring-CH-type finger 3 1 1
MIRT037721 TBX2 T-box 2 1 1
MIRT037722 TSC22D3 TSC22 domain family member 3 1 1
MIRT037723 DUT deoxyuridine triphosphatase 1 1
MIRT037724 FAM171A2 family with sequence similarity 171 member A2 1 1
MIRT037725 FGFR1 fibroblast growth factor receptor 1 1 1
MIRT037726 FRAT1 FRAT1, WNT signaling pathway regulator 1 1
MIRT037727 PSMD11 proteasome 26S subunit, non-ATPase 11 1 1
MIRT037728 PABPC1 poly(A) binding protein cytoplasmic 1 1 1
MIRT037729 ENO1 enolase 1 1 1
MIRT037730 AP3D1 adaptor related protein complex 3 delta 1 subunit 1 1
MIRT037731 TUBA1A tubulin alpha 1a 1 1
MIRT037732 ULK3 unc-51 like kinase 3 1 1
MIRT037733 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha 1 1
MIRT037734 SLC25A46 solute carrier family 25 member 46 1 1
MIRT037735 MED15 mediator complex subunit 15 1 1
MIRT037736 IRF2BP1 interferon regulatory factor 2 binding protein 1 1 1
MIRT037737 UBA1 ubiquitin like modifier activating enzyme 1 1 1
MIRT037738 ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase 1 1
MIRT037739 CTNNA1 catenin alpha 1 1 1
MIRT037740 ADRM1 adhesion regulating molecule 1 1 1
MIRT037741 CCDC106 coiled-coil domain containing 106 1 1
MIRT054493 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 3 1
MIRT451195 PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 2 2
MIRT452931 DISC1 disrupted in schizophrenia 1 2 2
MIRT455468 LYPLA2 lysophospholipase II 2 2
MIRT457068 TOR4A torsin family 4 member A 2 2
MIRT464195 VGLL4 vestigial like family member 4 2 4
MIRT483030 KHSRP KH-type splicing regulatory protein 2 4
MIRT486062 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT486120 INO80E INO80 complex subunit E 2 2
MIRT486866 DPF1 double PHD fingers 1 2 2
MIRT488343 PAX2 paired box 2 2 2
MIRT488790 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT490249 MFI2 melanotransferrin 2 2
MIRT490264 HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2 2
MIRT490756 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT492321 SETD1B SET domain containing 1B 2 2
MIRT492851 NRGN neurogranin 2 2
MIRT499604 ANKRD45 ankyrin repeat domain 45 2 2
MIRT500189 BARX1 BARX homeobox 1 2 4
MIRT516765 FAM212B family with sequence similarity 212 member B 2 4
MIRT517949 TRIM59 tripartite motif containing 59 2 2
MIRT521182 SCAF4 SR-related CTD associated factor 4 2 2
MIRT526462 OSBPL5 oxysterol binding protein like 5 2 2
MIRT535148 PLEKHG5 pleckstrin homology and RhoGEF domain containing G5 2 2
MIRT569528 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT570593 NFIX nuclear factor I X 2 2
MIRT571219 F2R coagulation factor II thrombin receptor 2 2
MIRT574145 MARVELD1 MARVEL domain containing 1 2 2
MIRT608758 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT649509 RAB17 RAB17, member RAS oncogene family 2 2
MIRT692165 RNF207 ring finger protein 207 2 2
MIRT703495 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT711081 NEUROD2 neuronal differentiation 2 2 2
MIRT712090 UNC13A unc-13 homolog A 2 2
MIRT712531 CYTH2 cytohesin 2 2 2
MIRT712755 GMDS GDP-mannose 4,6-dehydratase 2 2
MIRT712893 TGFA transforming growth factor alpha 2 2
MIRT714684 PRX periaxin 2 2
MIRT714723 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714814 NOB1 NIN1/PSMD8 binding protein 1 homolog 2 2
MIRT716774 C1orf229 chromosome 1 open reading frame 229 2 2
MIRT717511 HRNR hornerin 2 2
MIRT717653 THBS2 thrombospondin 2 2 2
MIRT719595 PIAS4 protein inhibitor of activated STAT 4 2 2
MIRT720525 PTGR2 prostaglandin reductase 2 2 2
MIRT724925 VPS18 VPS18, CORVET/HOPS core subunit 2 2
MIRT737146 NOS3 nitric oxide synthase 3 1 0
MIRT756003 SLC7A5 solute carrier family 7 member 5 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-744 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-744 Tert-butyl hydroperoxide (t-BHP) NULL 6410 Microarray mouse auditory cells 20510889 2010 up-regulated
miR-744 Ursodeoxycholic acid (UDCA) approved 31401 Microarray rat Liver 20689055 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-744 Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901)
hsa-mir-744 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-744 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-744 Fluorouracil 3385 NSC19893 approved resistant cell line (OE19)
hsa-mir-744 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-mir-744 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-744 Cisplatin 5460033 NSC119875 approved resistant cell line (SGC-7901)
hsa-miR-744-5p [1,1'-binaphthalene]-2,2',3,3'-tetrol 316673 NSC245006 sensitive
hsa-miR-744-5p 4-n-[12-[(5-amino-6-chloropyrimidin-4-yl)amino]dodecyl]-6-chloropyrimidine-4,5-diamine 358989 NSC619196 sensitive
hsa-miR-744-5p 5,7-dibromo-2-[(e)-2-(4-hydroxy-3-methoxyphenyl)ethenyl]quinolin-8-ol 135460261 NSC67090 sensitive
hsa-miR-744-5p Benzyl 2-(dibenzylamino)-3-phenylpropanoate 375616 NSC655438 sensitive
hsa-miR-744-5p N'-[(Z)-[(4Z)-2-(1,3-benzodioxol-5-yl)-4-[[4-oxo-4-[2-(trifluoromethyl)anilino]butanoyl]hydrazinylidene]chromen-3-ylidene]amino]-N-[2-(trifluoromethyl)phenyl]butanediamide 6399328 NSC641210 sensitive
hsa-miR-744-5p Paullone analog 47 396411 NSC702373 sensitive
hsa-miR-744-5p Ursa-11,13(18)-dien-28-oic acid-3.beta.-ol 378695 NSC661747 sensitive
hsa-miR-744-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7, LY2)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-miR-744-5p Carboplatin 38904 NSC241240 approved sensitive High Ovarian Cancer tissue and cell line (MDAH-2274, SKOV3)
hsa-miR-744-5p Gefitinib 123631 NSC715055 approved resistant High Lung Adenocarcinoma cell line (A549)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Squamous Cell Carcinoma cell line (KYSE410)
hsa-miR-744-5p Tamoxifen 2733525 NSC180973 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-744-5p Vinorelbine 44424639 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-744-5p Epirubicin 41867 NSC256942 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-744-5p Erlotinib 176870 NSC718781 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-744-5p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-744-5p Sunitinib 5329102 NSC750690 approved sensitive High Renal Cell Cancer tissue
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-744-5p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (HepG2)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901, BGC-823)
hsa-miR-744-5p Oxaliplatin 6857599 NSC266046 approved resistant Low Colorectal Cancer cell line (HCT-116)
hsa-miR-744-5p Bortezomib 387447 NSC681239 approved sensitive Low Multiple Myeloma tissue
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-744-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-744-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-744-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-744-5p Fluorouracil 3385 NSC19893 approved sensitive cell line (HCT15)
hsa-miR-744-5p 4-Hydroxytamoxifen+Tamoxifen sensitive cell line (LY2)
hsa-miR-744-5p Ethanol+Tamoxifen sensitive cell line (LY2)
hsa-miR-744-5p Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-miR-744-5p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-miR-744-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (MDA-231)
hsa-miR-744-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (PC3PR20)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)
hsa-miR-744-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (H23)

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