pre-miRNA Information
pre-miRNA hsa-mir-744   
Genomic Coordinates chr17: 12081899 - 12081996
Synonyms MIRN744, hsa-mir-744, MIR744
Description Homo sapiens miR-744 stem-loop
Comment This sequence was identified as a miRNA candidate by Berezikov et al. using RAKE and MPSS techniques .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-744-5p
Sequence 11| UGCGGGGCUAGGGCUAACAGCA |32
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN23015028 1 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs557969425 1 dbSNP
rs748252260 4 dbSNP
rs1470408501 7 dbSNP
rs1178657616 10 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
B6B8SM miR-744-5p Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Urine Real-time polymerase chain reaction
Gene Information
Gene Symbol COLGALT1   
Synonyms GLT25D1
Description collagen beta(1-O)galactosyltransferase 1
Transcript NM_024656   
Expression
Putative miRNA Targets on COLGALT1
3'UTR of COLGALT1
(miRNA target sites are highlighted)
>COLGALT1|NM_024656|3'UTR
   1 GGGGTAGCAGCCAGAAAGCCAAAGCAGCCATCGGTGGCCCAGGCTCCACGTGCTTACTGAGGACATCAGGTCCACCTCTG
  81 GACCCCTTGGCAGGCCACAGAGGGCTCTCGTGTGGGGTGGTGTCCAGCCAGCTCTTGCTAAGCAATCACGTGCACACAGG
 161 CAGCATTAATGGAGTGCCTACTGCATGCCAGCAACAGGGCTTGGCCCTGGGGAATTGGGAGGAACCAAGCCCTCTTCATC
 241 TGTTCATGTGCCCAGCATTTATTAAGCACCTGCTGTATGCAAGGTTCCCATGTTACGGCAGTGAATGAGGCATAATTGTT
 321 CCCTCCATCAGCGATTGATTCAGTCATCAAGCAGTTACTGATCAGATTAAGAATCAGGCACTAGTGATACACATTCATTT
 401 TTAAAATTCATTCAAGGATTTATTGAGTGCCTACTGTGTGTTGGGTGCCATTCCAGGCTCTGGGATTTTTTTTTTTTTTT
 481 TTTTAAGAGTAGAGTCTGTCTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGACGGCTCACTGCAGCCTGCGCCTCCCAGC
 561 GTCCAGCAATTCTTGTTTCTCGGCCTCCCAAGTAGCTGGGACTATAGGTGCGTGCCATCACATCTGGCTAGTTTTTGTAT
 641 TTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTGCCCGCCTTGGCC
 721 ACCCAAAGTGCTAGGGTTACAGGCATGAGCCACTGTGCCCAGCCCAGGCTCTGGGAATATTGAGATAAATAAGATGCTTC
 801 TATCCATTTATTCAAGCACATATTGGTCACCTACTGTGTGCCTGGCACTCATGTCACAAAGATAAGTTCCTGATTCGGTA
 881 CACTTACTGAGCACCTGCTGTGTGCAGGGAGCTGAGCTATGGGATGGGAATGGGAGTAAACAAGGTACTTTTTACTTTTT
 961 TCTTTTTTTCCTCACTGCTAGACGGTGTGGGAACTTCTCACTCATTGGCTTCTTTCCCACACACCTGAAGAGCACTGACT
1041 GTGTGCCGGGCACTAGTGATACAAAAGAGTGTGACAGTTGTTCAGTCTGCATTTTCGATCATGGGCTACATGCCGAGTGC
1121 TGGGGCACAGAGATGAACAAGATCGGTTCCTTCACTTCTTCATGCCACAAGTGTTTATTGAGCACCTGTGTGCCAGGCCT
1201 CACAGACTCCCAGTTGGGTTGAAGAATGGTTGACTGAGTTTGATTCTTCCTGTACCCTCGGTCGTCTGAGCTGTGTGCAG
1281 ACAACATCCCCCCACCACCCAAGAGGGAGGGTAGCTCTTCCGCCACCAGGGGCAAGCACAGGTCCTGGTGGCCCCACGCC
1361 ACATGTTAGCCCCCCTGGAGGGGGCGCCAGTTGGAGACGGGGGCTGGGTGTCCCTGGCCCACTCCCGGTCCCCTGTGCTT
1441 TACCTCCTTGCCCTTGTGTCTCAGGTGTGGTCCCTGCCTGCTTGATGAAGTTGCTCTGTTCAAGCCTTTGGTGGGATCAT
1521 GTGTTTGGGGGCTTTTAGGGGACCCAGCTGCACTGGGGCACTGCCCGTGGCCTGGGTAGGACATTTCCCAGCAAGGGCTG
1601 GAGGAGTTGCCGTGCCTTCAGCCTGAATCGAATGTCAGAACCAGCCAGCGGTGCTTCACCCTCTTGGGGATAACTTGCTT
1681 AGTTTTTTAATAAATGTTCCTGGTTGGTTTTCACAGCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acGACAAUCGGG------------AUCGGGGCGu 5'
            ||| |:||||            ||||||| | 
Target 5' tcCTGGTGGCCCCACGCCACATGTTAGCCCCCCt 3'
1343 - 1376 126.00 -24.60
2
miRNA  3' acgacAAUCGG-GAU-CGGGGCGu 5'
               | |||| ||: |||| || 
Target 5' aggcaTGAGCCACTGTGCCCAGCc 3'
741 - 764 125.00 -17.90
3
miRNA  3' acgACAAUCGG---GAUCGGGGCgu 5'
             ||||:|||   ||:|:|:||  
Target 5' ccaTGTTGGCCAGGCTGGTCTCGaa 3'
663 - 687 123.00 -22.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30104078 4 COSMIC
COSN18742026 5 COSMIC
COSN19634680 72 COSMIC
COSN27263866 485 COSMIC
COSN27343377 485 COSMIC
COSN25860627 1233 COSMIC
COSN7355503 1256 COSMIC
COSN21849882 1358 COSMIC
COSN21434372 1473 COSMIC
COSN25629232 1559 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1277181597 3 dbSNP
rs1337999504 4 dbSNP
rs1442525308 14 dbSNP
rs769753327 19 dbSNP
rs1361268352 20 dbSNP
rs775567212 22 dbSNP
rs749300197 23 dbSNP
rs768731759 30 dbSNP
rs1056563988 31 dbSNP
rs111275079 33 dbSNP
rs372447597 34 dbSNP
rs1214464508 35 dbSNP
rs540408380 39 dbSNP
rs1459338085 42 dbSNP
rs1231711093 44 dbSNP
rs1207235910 45 dbSNP
rs751888144 45 dbSNP
rs1188819622 46 dbSNP
rs1262815665 49 dbSNP
rs376326151 50 dbSNP
rs369535150 51 dbSNP
rs1415283591 57 dbSNP
rs902878245 60 dbSNP
rs561662387 68 dbSNP
rs1033384720 70 dbSNP
rs8100092 72 dbSNP
rs1432506584 74 dbSNP
rs1376947274 79 dbSNP
rs986012089 81 dbSNP
rs1300541213 93 dbSNP
rs1419548011 95 dbSNP
rs1366753857 97 dbSNP
rs1018804541 102 dbSNP
rs1189997786 108 dbSNP
rs965846834 109 dbSNP
rs1470759627 110 dbSNP
rs972586167 111 dbSNP
rs1040075709 117 dbSNP
rs529356369 118 dbSNP
rs1223467745 121 dbSNP
rs1281400090 130 dbSNP
rs1216149974 132 dbSNP
rs1316137435 137 dbSNP
rs746284150 140 dbSNP
rs548496267 144 dbSNP
rs1265846693 146 dbSNP
rs893137985 148 dbSNP
rs1373910292 150 dbSNP
rs946600848 151 dbSNP
rs1043661126 153 dbSNP
rs1356807975 165 dbSNP
rs952182588 170 dbSNP
rs1313173164 173 dbSNP
rs984808442 176 dbSNP
rs1343807192 185 dbSNP
rs1251433301 186 dbSNP
rs1161682453 192 dbSNP
rs1401818501 196 dbSNP
rs75033523 205 dbSNP
rs530625961 208 dbSNP
rs1163397064 211 dbSNP
rs542338197 213 dbSNP
rs1258246308 214 dbSNP
rs926581282 222 dbSNP
rs1390082834 226 dbSNP
rs938276482 237 dbSNP
rs1240168502 238 dbSNP
rs184631448 239 dbSNP
rs1369409913 247 dbSNP
rs1231362636 251 dbSNP
rs1336321772 262 dbSNP
rs1293292363 270 dbSNP
rs918109920 274 dbSNP
rs187924902 277 dbSNP
rs1323458986 281 dbSNP
rs1041895044 283 dbSNP
rs902932899 287 dbSNP
rs561966738 291 dbSNP
rs1324487840 295 dbSNP
rs1463415929 296 dbSNP
rs1054136951 297 dbSNP
rs1170001960 300 dbSNP
rs550765838 304 dbSNP
rs570588070 310 dbSNP
rs1025882004 314 dbSNP
rs1486103410 322 dbSNP
rs770180726 324 dbSNP
rs748906235 328 dbSNP
rs77094585 333 dbSNP
rs775658803 334 dbSNP
rs1273290697 336 dbSNP
rs1226122069 338 dbSNP
rs1018858913 348 dbSNP
rs965901051 349 dbSNP
rs1305253126 351 dbSNP
rs1297348111 354 dbSNP
rs993341643 361 dbSNP
rs964084894 376 dbSNP
rs1231301723 381 dbSNP
rs1026527487 386 dbSNP
rs1370725777 391 dbSNP
rs1301655608 394 dbSNP
rs10402189 400 dbSNP
rs1395920197 403 dbSNP
rs1298079712 406 dbSNP
rs914528171 408 dbSNP
rs1356339355 410 dbSNP
rs1171410129 417 dbSNP
rs1453937367 423 dbSNP
rs1466462203 423 dbSNP
rs985248906 426 dbSNP
rs1394282915 435 dbSNP
rs926643866 442 dbSNP
rs566120674 454 dbSNP
rs959347067 460 dbSNP
rs1191461356 464 dbSNP
rs1209389916 465 dbSNP
rs1181294270 466 dbSNP
rs1291578767 466 dbSNP
rs1300783693 466 dbSNP
rs34244232 466 dbSNP
rs376861482 466 dbSNP
rs778219611 466 dbSNP
rs992400066 467 dbSNP
rs1372170781 474 dbSNP
rs536070276 475 dbSNP
rs8100563 477 dbSNP
rs74889990 485 dbSNP
rs1436494290 486 dbSNP
rs77726968 487 dbSNP
rs77949953 488 dbSNP
rs923857853 488 dbSNP
rs935284401 495 dbSNP
rs1056194296 501 dbSNP
rs1377927801 503 dbSNP
rs896329116 511 dbSNP
rs1257551074 513 dbSNP
rs1417192058 514 dbSNP
rs1252075516 517 dbSNP
rs145095341 520 dbSNP
rs945588772 522 dbSNP
rs1485038919 524 dbSNP
rs1163272964 533 dbSNP
rs1042564165 534 dbSNP
rs555594306 535 dbSNP
rs569232352 537 dbSNP
rs1260441790 544 dbSNP
rs1237568037 546 dbSNP
rs1457460929 550 dbSNP
rs192453665 551 dbSNP
rs1342939895 552 dbSNP
rs935779549 554 dbSNP
rs1449662255 556 dbSNP
rs1353637692 559 dbSNP
rs995178196 561 dbSNP
rs745747597 562 dbSNP
rs1402681370 566 dbSNP
rs10423214 570 dbSNP
rs551435493 582 dbSNP
rs761951234 583 dbSNP
rs1290013812 600 dbSNP
rs1331442428 602 dbSNP
rs1189636072 603 dbSNP
rs1008486905 605 dbSNP
rs1019769644 610 dbSNP
rs138950257 612 dbSNP
rs368479061 613 dbSNP
rs183559615 615 dbSNP
rs914645150 616 dbSNP
rs1234155009 617 dbSNP
rs1026160438 621 dbSNP
rs1212413663 623 dbSNP
rs1380378252 626 dbSNP
rs1375363294 629 dbSNP
rs574034167 632 dbSNP
rs775472003 632 dbSNP
rs1460799590 633 dbSNP
rs543063973 638 dbSNP
rs1166408955 640 dbSNP
rs1485658030 640 dbSNP
rs1472829344 643 dbSNP
rs1372187270 645 dbSNP
rs951947872 646 dbSNP
rs760747994 647 dbSNP
rs1248961960 650 dbSNP
rs917723162 652 dbSNP
rs1338816959 654 dbSNP
rs140731529 654 dbSNP
rs1467488621 654 dbSNP
rs753540302 655 dbSNP
rs1229818699 656 dbSNP
rs1327988282 657 dbSNP
rs1298014714 658 dbSNP
rs530808814 662 dbSNP
rs959400747 663 dbSNP
rs1415654601 664 dbSNP
rs992118240 665 dbSNP
rs1165797361 666 dbSNP
rs3177708 667 dbSNP
rs1391190912 668 dbSNP
rs1358459973 671 dbSNP
rs1452923503 672 dbSNP
rs564301870 673 dbSNP
rs966996480 676 dbSNP
rs8110571 677 dbSNP
rs925495345 678 dbSNP
rs936818137 681 dbSNP
rs989931458 682 dbSNP
rs997023026 683 dbSNP
rs910298870 685 dbSNP
rs546633217 686 dbSNP
rs1040067202 688 dbSNP
rs112170415 689 dbSNP
rs929257717 690 dbSNP
rs757901063 691 dbSNP
rs1277466477 692 dbSNP
rs1192292617 693 dbSNP
rs189496503 694 dbSNP
rs528831650 695 dbSNP
rs960045453 696 dbSNP
rs887645619 697 dbSNP
rs1204317484 698 dbSNP
rs1257164444 698 dbSNP
rs1208983725 699 dbSNP
rs548585847 701 dbSNP
rs1006460543 702 dbSNP
rs1219761895 703 dbSNP
rs1033764890 704 dbSNP
rs568549078 708 dbSNP
rs1013589325 709 dbSNP
rs1024948138 712 dbSNP
rs967092290 713 dbSNP
rs149551927 717 dbSNP
rs1377688227 718 dbSNP
rs1400471383 719 dbSNP
rs919755063 719 dbSNP
rs558216290 721 dbSNP
rs111493336 722 dbSNP
rs958268687 724 dbSNP
rs1326660198 725 dbSNP
rs1352927835 726 dbSNP
rs1046860204 728 dbSNP
rs1238246358 731 dbSNP
rs985627478 733 dbSNP
rs181841342 734 dbSNP
rs1249564854 737 dbSNP
rs184363184 737 dbSNP
rs975805801 739 dbSNP
rs1230089708 741 dbSNP
rs1292094875 742 dbSNP
rs922984800 745 dbSNP
rs574195198 746 dbSNP
rs1047674901 747 dbSNP
rs1343793229 748 dbSNP
rs997516509 749 dbSNP
rs1458167867 750 dbSNP
rs1196196366 751 dbSNP
rs887689506 754 dbSNP
rs780488837 755 dbSNP
rs1162938341 756 dbSNP
rs1476209082 758 dbSNP
rs1414880480 760 dbSNP
rs1343562593 761 dbSNP
rs941913280 762 dbSNP
rs1214304933 764 dbSNP
rs904710750 777 dbSNP
rs1054892429 778 dbSNP
rs749647295 781 dbSNP
rs1013644742 783 dbSNP
rs1322998172 787 dbSNP
rs960139412 798 dbSNP
rs1360319252 799 dbSNP
rs1300222666 803 dbSNP
rs1436249075 806 dbSNP
rs1024998892 811 dbSNP
rs992779168 824 dbSNP
rs1459561627 825 dbSNP
rs77287744 825 dbSNP
rs556573594 831 dbSNP
rs1170010678 837 dbSNP
rs74335244 843 dbSNP
rs1417160973 845 dbSNP
rs1475055719 849 dbSNP
rs1165897881 851 dbSNP
rs188761533 853 dbSNP
rs1191656993 858 dbSNP
rs931120657 863 dbSNP
rs1203418428 870 dbSNP
rs568000222 872 dbSNP
rs982634174 877 dbSNP
rs537017162 878 dbSNP
rs1040680027 880 dbSNP
rs1324450419 882 dbSNP
rs1388962535 883 dbSNP
rs1368432292 885 dbSNP
rs1297629329 886 dbSNP
rs566367435 887 dbSNP
rs1438779185 889 dbSNP
rs1169464828 895 dbSNP
rs899500540 905 dbSNP
rs1018472555 908 dbSNP
rs564232734 914 dbSNP
rs1267470335 929 dbSNP
rs143644625 929 dbSNP
rs1176164188 934 dbSNP
rs774992357 935 dbSNP
rs766766186 945 dbSNP
rs1253598948 952 dbSNP
rs2303799 954 dbSNP
rs895869928 955 dbSNP
rs950454213 955 dbSNP
rs1014292397 962 dbSNP
rs1022939751 963 dbSNP
rs772204096 968 dbSNP
rs2303800 970 dbSNP
rs994876286 978 dbSNP
rs941965609 984 dbSNP
rs1054945499 986 dbSNP
rs1414327161 988 dbSNP
rs1210000796 989 dbSNP
rs1248138406 997 dbSNP
rs1446287258 998 dbSNP
rs114168906 1007 dbSNP
rs1467360026 1024 dbSNP
rs1378198476 1026 dbSNP
rs949211251 1028 dbSNP
rs571079639 1031 dbSNP
rs746996138 1040 dbSNP
rs908384417 1040 dbSNP
rs548698130 1041 dbSNP
rs181487750 1042 dbSNP
rs879364248 1048 dbSNP
rs902596912 1049 dbSNP
rs1417360838 1051 dbSNP
rs776599033 1063 dbSNP
rs999581260 1063 dbSNP
rs932298683 1064 dbSNP
rs1260718560 1071 dbSNP
rs1237448240 1078 dbSNP
rs1331327611 1081 dbSNP
rs1042754866 1084 dbSNP
rs1353855548 1085 dbSNP
rs1336395429 1087 dbSNP
rs1054207760 1088 dbSNP
rs760983481 1092 dbSNP
rs868226519 1097 dbSNP
rs531250970 1098 dbSNP
rs1390227689 1101 dbSNP
rs34340128 1103 dbSNP
rs1385786385 1106 dbSNP
rs552014114 1107 dbSNP
rs1474575162 1108 dbSNP
rs186224429 1110 dbSNP
rs375786191 1115 dbSNP
rs1424775462 1116 dbSNP
rs547991555 1121 dbSNP
rs540127761 1122 dbSNP
rs1466602384 1126 dbSNP
rs1269298896 1136 dbSNP
rs1213215500 1140 dbSNP
rs200308237 1142 dbSNP
rs1286188370 1144 dbSNP
rs950528700 1146 dbSNP
rs1245710525 1147 dbSNP
rs879440975 1152 dbSNP
rs1229858279 1155 dbSNP
rs1268142749 1159 dbSNP
rs1044862391 1162 dbSNP
rs553649980 1163 dbSNP
rs759298493 1168 dbSNP
rs1460520404 1169 dbSNP
rs536736794 1170 dbSNP
rs1458061356 1181 dbSNP
rs556742672 1185 dbSNP
rs995242769 1193 dbSNP
rs76660578 1198 dbSNP
rs1249252375 1201 dbSNP
rs1193494385 1202 dbSNP
rs1449944392 1204 dbSNP
rs538664632 1215 dbSNP
rs1210681437 1216 dbSNP
rs1004135834 1220 dbSNP
rs1249803748 1222 dbSNP
rs1225982847 1230 dbSNP
rs990728331 1231 dbSNP
rs752619186 1233 dbSNP
rs949264390 1252 dbSNP
rs1015413060 1254 dbSNP
rs1046665084 1255 dbSNP
rs1328881700 1257 dbSNP
rs923767091 1259 dbSNP
rs147202013 1260 dbSNP
rs935429759 1261 dbSNP
rs1474318121 1262 dbSNP
rs1166316062 1263 dbSNP
rs1432029679 1263 dbSNP
rs577880782 1264 dbSNP
rs893841182 1265 dbSNP
rs1199720629 1266 dbSNP
rs1437307250 1268 dbSNP
rs1453102992 1273 dbSNP
rs140485177 1280 dbSNP
rs1404915634 1283 dbSNP
rs1218600975 1285 dbSNP
rs761493034 1287 dbSNP
rs925622413 1288 dbSNP
rs1040018159 1289 dbSNP
rs1233426621 1292 dbSNP
rs901428278 1295 dbSNP
rs1305799160 1297 dbSNP
rs553703720 1310 dbSNP
rs998415324 1311 dbSNP
rs1411232114 1317 dbSNP
rs1371582137 1320 dbSNP
rs1307225343 1321 dbSNP
rs191370895 1322 dbSNP
rs1173654142 1323 dbSNP
rs1469707535 1328 dbSNP
rs1409767978 1329 dbSNP
rs1184654675 1333 dbSNP
rs542309841 1349 dbSNP
rs535986984 1352 dbSNP
rs562243796 1353 dbSNP
rs950245047 1356 dbSNP
rs1345551273 1358 dbSNP
rs377093925 1359 dbSNP
rs905934277 1363 dbSNP
rs994940084 1364 dbSNP
rs1049053414 1366 dbSNP
rs1350767309 1366 dbSNP
rs1278183107 1370 dbSNP
rs1283229920 1370 dbSNP
rs1446353914 1370 dbSNP
rs531292960 1371 dbSNP
rs763665845 1373 dbSNP
rs1299169116 1375 dbSNP
rs1004104803 1376 dbSNP
rs180984411 1378 dbSNP
rs750985347 1385 dbSNP
rs756981865 1386 dbSNP
rs1417496347 1388 dbSNP
rs1179698237 1391 dbSNP
rs1023221430 1399 dbSNP
rs1210755622 1399 dbSNP
rs1238944491 1399 dbSNP
rs369882322 1400 dbSNP
rs1266128386 1404 dbSNP
rs1210121117 1409 dbSNP
rs573645361 1415 dbSNP
rs780676227 1423 dbSNP
rs952350551 1426 dbSNP
rs527965981 1427 dbSNP
rs8090 1428 dbSNP
rs990003906 1431 dbSNP
rs955692451 1432 dbSNP
rs988460054 1433 dbSNP
rs1457891338 1438 dbSNP
rs1393740545 1446 dbSNP
rs1162984809 1453 dbSNP
rs1407244871 1456 dbSNP
rs917495781 1461 dbSNP
rs1182271028 1465 dbSNP
rs575569956 1466 dbSNP
rs1246174759 1473 dbSNP
rs942723127 1477 dbSNP
rs1190367292 1478 dbSNP
rs1464962919 1479 dbSNP
rs1245587513 1481 dbSNP
rs1218961438 1488 dbSNP
rs1039735799 1491 dbSNP
rs1299123612 1496 dbSNP
rs1323196566 1497 dbSNP
rs1290108561 1499 dbSNP
rs950363174 1502 dbSNP
rs980643505 1505 dbSNP
rs901145386 1509 dbSNP
rs1436407582 1514 dbSNP
rs1367024919 1520 dbSNP
rs1389329436 1523 dbSNP
rs1438663983 1528 dbSNP
rs934255478 1530 dbSNP
rs11545706 1533 dbSNP
rs1168180792 1539 dbSNP
rs1324888293 1545 dbSNP
rs1428882285 1550 dbSNP
rs112629292 1553 dbSNP
rs1170449951 1558 dbSNP
rs1449955179 1559 dbSNP
rs1233018920 1565 dbSNP
rs755378347 1567 dbSNP
rs1005712689 1568 dbSNP
rs1016009054 1589 dbSNP
rs536842305 1612 dbSNP
rs1011921920 1613 dbSNP
rs1040438545 1617 dbSNP
rs1480392946 1630 dbSNP
rs1229567963 1631 dbSNP
rs1194310413 1633 dbSNP
rs1269809948 1643 dbSNP
rs779359528 1650 dbSNP
rs1193141871 1651 dbSNP
rs970347442 1660 dbSNP
rs1221068195 1662 dbSNP
rs73524020 1666 dbSNP
rs1028549842 1668 dbSNP
rs570067100 1669 dbSNP
rs1030909640 1670 dbSNP
rs1408192049 1671 dbSNP
rs956786270 1673 dbSNP
rs1372880257 1674 dbSNP
rs1368500164 1675 dbSNP
rs1309678486 1682 dbSNP
rs1462280857 1683 dbSNP
rs989330107 1689 dbSNP
rs1164629307 1694 dbSNP
rs915044976 1696 dbSNP
rs1394809132 1699 dbSNP
rs748666129 1700 dbSNP
rs1181036068 1701 dbSNP
rs1471433506 1703 dbSNP
rs538995537 1711 dbSNP
rs3177716 1714 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site CDS
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
412 hsa-miR-744-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT016085 ARL15 ADP ribosylation factor like GTPase 15 1 1
MIRT016086 AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3 1 2
MIRT016087 PPTC7 PTC7 protein phosphatase homolog 2 3
MIRT016088 RASSF1 Ras association domain family member 1 1 1
MIRT016089 IER5 immediate early response 5 1 1
MIRT037383 UFC1 ubiquitin-fold modifier conjugating enzyme 1 1 1
MIRT037384 STAM2 signal transducing adaptor molecule 2 1 1
MIRT037385 SRRM2 serine/arginine repetitive matrix 2 1 1
MIRT037386 DCXR dicarbonyl and L-xylulose reductase 1 1
MIRT037387 TSPAN17 tetraspanin 17 1 1
MIRT037388 ACTB actin beta 1 1
MIRT037389 HIST1H2BC histone cluster 1 H2B family member c 1 1
MIRT037390 ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 1 1
MIRT037391 VDAC1 voltage dependent anion channel 1 1 1
MIRT037392 RNASEK ribonuclease K 1 1
MIRT037393 CDK16 cyclin dependent kinase 16 1 1
MIRT037394 ZCCHC24 zinc finger CCHC-type containing 24 1 1
MIRT037395 ARRDC2 arrestin domain containing 2 1 1
MIRT037396 SGMS1 sphingomyelin synthase 1 1 1
MIRT037397 HSPD1 heat shock protein family D (Hsp60) member 1 1 1
MIRT037398 MRPL46 mitochondrial ribosomal protein L46 1 1
MIRT037399 RHEB Ras homolog, mTORC1 binding 1 1
MIRT037400 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT037401 TP53I13 tumor protein p53 inducible protein 13 1 1
MIRT037402 CD44 CD44 molecule (Indian blood group) 1 1
MIRT037403 USP12 ubiquitin specific peptidase 12 1 1
MIRT037404 AP2B1 adaptor related protein complex 2 beta 1 subunit 1 1
MIRT037405 RPL18A ribosomal protein L18a 1 1
MIRT037406 PPP1CA protein phosphatase 1 catalytic subunit alpha 1 1
MIRT037407 TNRC6B trinucleotide repeat containing 6B 1 1
MIRT037408 PXK PX domain containing serine/threonine kinase like 1 1
MIRT037409 TDRKH tudor and KH domain containing 1 1
MIRT037410 PRRC2A proline rich coiled-coil 2A 1 1
MIRT037411 ATP11A ATPase phospholipid transporting 11A 1 1
MIRT037412 NDE1 nudE neurodevelopment protein 1 1 1
MIRT037413 STK16 serine/threonine kinase 16 1 1
MIRT037414 PSMB2 proteasome subunit beta 2 1 1
MIRT037415 EPN1 epsin 1 1 1
MIRT037416 EN2 engrailed homeobox 2 1 1
MIRT037417 LARP1 La ribonucleoprotein domain family member 1 1 1
MIRT037418 SRCAP Snf2 related CREBBP activator protein 1 1
MIRT037419 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 1 1
MIRT037420 AP2A2 adaptor related protein complex 2 alpha 2 subunit 1 1
MIRT037421 ACTG1 actin gamma 1 1 1
MIRT037422 PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing 1 1
MIRT037423 UBE2O ubiquitin conjugating enzyme E2 O 1 1
MIRT037424 KLHL15 kelch like family member 15 1 1
MIRT037425 SECISBP2 SECIS binding protein 2 1 1
MIRT037426 KIAA0922 transmembrane 131 like 1 1
MIRT037427 PTMA prothymosin, alpha 1 1
MIRT037428 WDR45B WD repeat domain 45B 1 1
MIRT037429 ZNF282 zinc finger protein 282 1 1
MIRT037430 GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase 1 1
MIRT037431 TNKS tankyrase 1 1
MIRT037432 NOP2 NOP2 nucleolar protein 1 1
MIRT037433 GAK cyclin G associated kinase 1 1
MIRT037434 ATP6 ATP synthase F0 subunit 6 1 1
MIRT037435 DIDO1 death inducer-obliterator 1 1 1
MIRT037436 RPL3 ribosomal protein L3 1 1
MIRT037437 AIMP2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 1 1
MIRT037438 PIGC phosphatidylinositol glycan anchor biosynthesis class C 1 1
MIRT037439 ARHGEF2 Rho/Rac guanine nucleotide exchange factor 2 1 1
MIRT037440 USP21 ubiquitin specific peptidase 21 1 1
MIRT037441 NUFIP2 NUFIP2, FMR1 interacting protein 2 1 1
MIRT037442 RPS6 ribosomal protein S6 1 1
MIRT037443 ILKAP ILK associated serine/threonine phosphatase 1 1
MIRT037444 COX1 cytochrome c oxidase subunit I 1 1
MIRT037445 VPS37C VPS37C, ESCRT-I subunit 1 1
MIRT037446 CDK12 cyclin dependent kinase 12 1 1
MIRT037447 RBM8A RNA binding motif protein 8A 1 1
MIRT037448 CKB creatine kinase B 1 1
MIRT037449 DHX57 DExH-box helicase 57 1 1
MIRT037450 DDX23 DEAD-box helicase 23 1 1
MIRT037451 ABI3 ABI family member 3 1 1
MIRT037452 GATAD2B GATA zinc finger domain containing 2B 1 1
MIRT037453 PDPK1 3-phosphoinositide dependent protein kinase 1 1 1
MIRT037454 C17orf70 Fanconi anemia core complex associated protein 100 1 1
MIRT037455 SKI SKI proto-oncogene 1 1
MIRT037456 KCTD11 potassium channel tetramerization domain containing 11 1 1
MIRT037457 GNB2L1 receptor for activated C kinase 1 1 1
MIRT037458 NCOA3 nuclear receptor coactivator 3 1 1
MIRT037459 PAK4 p21 (RAC1) activated kinase 4 2 3
MIRT037460 GDI2 GDP dissociation inhibitor 2 1 1
MIRT037461 SLC2A4RG SLC2A4 regulator 1 1
MIRT037462 SLX4 SLX4 structure-specific endonuclease subunit 1 1
MIRT037463 COPA coatomer protein complex subunit alpha 1 1
MIRT037464 GPRASP2 G protein-coupled receptor associated sorting protein 2 1 1
MIRT037465 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 1 1
MIRT037466 LIMS1 LIM zinc finger domain containing 1 1 1
MIRT037467 COTL1 coactosin like F-actin binding protein 1 1 1
MIRT037468 CAPNS1 calpain small subunit 1 1 1
MIRT037469 FRZB frizzled-related protein 1 1
MIRT037470 UBQLN4 ubiquilin 4 1 1
MIRT037471 NUP153 nucleoporin 153 1 1
MIRT037472 TMEM175 transmembrane protein 175 1 1
MIRT037473 HIST1H2BD histone cluster 1 H2B family member d 1 1
MIRT037474 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT037475 BCL2L12 BCL2 like 12 1 1
MIRT037476 HIST2H2AA3 histone cluster 2 H2A family member a3 1 1
MIRT037477 MINK1 misshapen like kinase 1 1 1
MIRT037478 PDXK pyridoxal kinase 1 1
MIRT037479 FAM110A family with sequence similarity 110 member A 1 1
MIRT037480 ZNF598 zinc finger protein 598 1 1
MIRT037481 ILK integrin linked kinase 1 1
MIRT037482 HINT1 histidine triad nucleotide binding protein 1 1 1
MIRT037483 WBP2 WW domain binding protein 2 1 1
MIRT037484 CYTB cytochrome b 1 1
MIRT037485 SCAMP2 secretory carrier membrane protein 2 1 1
MIRT037486 TRIM33 tripartite motif containing 33 1 1
MIRT037487 SLC25A3 solute carrier family 25 member 3 1 1
MIRT037488 IRS4 insulin receptor substrate 4 1 1
MIRT037489 TSR1 TSR1, ribosome maturation factor 1 1
MIRT037490 TCOF1 treacle ribosome biogenesis factor 1 1 1
MIRT037491 ATXN2L ataxin 2 like 1 1
MIRT037492 MTOR mechanistic target of rapamycin kinase 1 1
MIRT037493 ZNF318 zinc finger protein 318 1 1
MIRT037494 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 3
MIRT037495 SAMD4B sterile alpha motif domain containing 4B 1 1
MIRT037496 STMN1 stathmin 1 1 1
MIRT037497 SAT1 spermidine/spermine N1-acetyltransferase 1 1 1
MIRT037498 SALL1 spalt like transcription factor 1 1 1
MIRT037499 ZSCAN18 zinc finger and SCAN domain containing 18 1 1
MIRT037500 SLC35D1 solute carrier family 35 member D1 1 1
MIRT037501 TM9SF3 transmembrane 9 superfamily member 3 1 1
MIRT037502 TIAM1 T-cell lymphoma invasion and metastasis 1 1 1
MIRT037503 CHD5 chromodomain helicase DNA binding protein 5 1 1
MIRT037504 BAG6 BCL2 associated athanogene 6 1 1
MIRT037505 MED28 mediator complex subunit 28 1 1
MIRT037506 ANKRD52 ankyrin repeat domain 52 1 1
MIRT037507 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 1 1
MIRT037508 PPDPF pancreatic progenitor cell differentiation and proliferation factor 1 1
MIRT037509 PRKACA protein kinase cAMP-activated catalytic subunit alpha 1 1
MIRT037510 HPCAL4 hippocalcin like 4 1 1
MIRT037511 ZNF256 zinc finger protein 256 1 1
MIRT037512 CGNL1 cingulin like 1 1 1
MIRT037513 TUBA1B tubulin alpha 1b 1 1
MIRT037514 LNPEP leucyl and cystinyl aminopeptidase 1 1
MIRT037515 PDE4A phosphodiesterase 4A 1 1
MIRT037516 HOXD11 homeobox D11 2 3
MIRT037517 QARS glutaminyl-tRNA synthetase 1 1
MIRT037518 G3BP1 G3BP stress granule assembly factor 1 1 1
MIRT037519 PLEKHM2 pleckstrin homology and RUN domain containing M2 1 1
MIRT037520 POLR2A RNA polymerase II subunit A 1 1
MIRT037521 KIAA1462 junctional cadherin 5 associated 1 1
MIRT037522 SF3A1 splicing factor 3a subunit 1 1 1
MIRT037523 YBX1 Y-box binding protein 1 1 1
MIRT037524 PTGES3 prostaglandin E synthase 3 1 1
MIRT037525 FOXO3 forkhead box O3 1 1
MIRT037526 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 1 1
MIRT037527 AARS alanyl-tRNA synthetase 1 1
MIRT037528 ZNF155 zinc finger protein 155 1 1
MIRT037529 NCS1 neuronal calcium sensor 1 1 1
MIRT037530 FKBP4 FK506 binding protein 4 1 1
MIRT037531 ARHGDIA Rho GDP dissociation inhibitor alpha 1 1
MIRT037532 MAPK7 mitogen-activated protein kinase 7 1 1
MIRT037533 AGPAT2 1-acylglycerol-3-phosphate O-acyltransferase 2 1 1
MIRT037534 HIST1H1E histone cluster 1 H1 family member e 1 1
MIRT037535 MLF2 myeloid leukemia factor 2 1 1
MIRT037536 EDC3 enhancer of mRNA decapping 3 1 1
MIRT037537 CHRAC1 chromatin accessibility complex 1 1 1
MIRT037538 WIPF3 WAS/WASL interacting protein family member 3 1 1
MIRT037539 COX2 cytochrome c oxidase subunit II 1 1
MIRT037540 SRSF1 serine and arginine rich splicing factor 1 1 1
MIRT037541 CTNNBIP1 catenin beta interacting protein 1 1 1
MIRT037542 RPL4 ribosomal protein L4 1 1
MIRT037543 COX3 cytochrome c oxidase III 1 1
MIRT037544 DDX54 DEAD-box helicase 54 1 1
MIRT037545 TOB2 transducer of ERBB2, 2 1 1
MIRT037546 MAN2C1 mannosidase alpha class 2C member 1 1 1
MIRT037547 SMCR7L mitochondrial elongation factor 1 1 1
MIRT037548 RPLP1 ribosomal protein lateral stalk subunit P1 1 1
MIRT037549 RAN RAN, member RAS oncogene family 1 1
MIRT037550 NONO non-POU domain containing octamer binding 1 1
MIRT037551 CYB5R3 cytochrome b5 reductase 3 1 1
MIRT037552 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 1 1
MIRT037553 COLGALT1 collagen beta(1-O)galactosyltransferase 1 1 1
MIRT037554 MGRN1 mahogunin ring finger 1 1 1
MIRT037555 ANAPC1 anaphase promoting complex subunit 1 1 1
MIRT037556 TBX1 T-box 1 1 1
MIRT037557 NXPH4 neurexophilin 4 1 1
MIRT037558 HSPA1B heat shock protein family A (Hsp70) member 1B 1 1
MIRT037559 UBE2A ubiquitin conjugating enzyme E2 A 1 1
MIRT037560 KPNB1 karyopherin subunit beta 1 1 1
MIRT037561 NDUFB10 NADH:ubiquinone oxidoreductase subunit B10 1 1
MIRT037562 SYMPK symplekin 1 1
MIRT037563 SYPL1 synaptophysin like 1 1 1
MIRT037564 LRP3 LDL receptor related protein 3 1 1
MIRT037565 DDX24 DEAD-box helicase 24 1 1
MIRT037566 WDR37 WD repeat domain 37 1 1
MIRT037567 RPS14 ribosomal protein S14 1 1
MIRT037568 FAM53C family with sequence similarity 53 member C 1 1
MIRT037569 NMT1 N-myristoyltransferase 1 1 1
MIRT037570 PAGR1 PAXIP1 associated glutamate rich protein 1 1 1
MIRT037571 AKT2 AKT serine/threonine kinase 2 1 1
MIRT037572 TMEM14C transmembrane protein 14C 1 1
MIRT037573 MEX3D mex-3 RNA binding family member D 1 1
MIRT037574 BRAF B-Raf proto-oncogene, serine/threonine kinase 1 1
MIRT037575 POLR2L RNA polymerase II subunit L 1 1
MIRT037576 SERP1 stress associated endoplasmic reticulum protein 1 1 1
MIRT037577 C8orf33 chromosome 8 open reading frame 33 1 1
MIRT037578 NR1D2 nuclear receptor subfamily 1 group D member 2 1 1
MIRT037579 POLD3 DNA polymerase delta 3, accessory subunit 1 1
MIRT037580 HMGA1 high mobility group AT-hook 1 1 1
MIRT037581 SLC35B4 solute carrier family 35 member B4 1 1
MIRT037582 PELP1 proline, glutamate and leucine rich protein 1 1 1
MIRT037583 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 1 1
MIRT037584 RPL7A ribosomal protein L7a 1 1
MIRT037585 LAIR1 leukocyte associated immunoglobulin like receptor 1 1 1
MIRT037586 RPL10 ribosomal protein L10 1 1
MIRT037587 MRPS16 mitochondrial ribosomal protein S16 1 1
MIRT037588 SRM spermidine synthase 1 1
MIRT037589 EIF3K eukaryotic translation initiation factor 3 subunit K 1 1
MIRT037590 DESI1 desumoylating isopeptidase 1 1 1
MIRT037591 BET1 Bet1 golgi vesicular membrane trafficking protein 1 1
MIRT037592 HTRA2 HtrA serine peptidase 2 1 1
MIRT037593 LARP6 La ribonucleoprotein domain family member 6 1 1
MIRT037594 NOTCH2 notch 2 1 1
MIRT037595 ADCY9 adenylate cyclase 9 1 1
MIRT037596 C6orf62 chromosome 6 open reading frame 62 1 1
MIRT037597 FBXL19 F-box and leucine rich repeat protein 19 1 1
MIRT037598 L3MBTL2 L3MBTL2, polycomb repressive complex 1 subunit 1 1
MIRT037599 TRIM28 tripartite motif containing 28 1 1
MIRT037600 LGALS3 galectin 3 1 1
MIRT037601 IGSF8 immunoglobulin superfamily member 8 1 1
MIRT037602 LIN37 lin-37 DREAM MuvB core complex component 1 1
MIRT037603 PTPRF protein tyrosine phosphatase, receptor type F 1 1
MIRT037604 MTSS1L MTSS1L, I-BAR domain containing 1 1
MIRT037605 TRMT2A tRNA methyltransferase 2 homolog A 1 1
MIRT037606 DVL1 dishevelled segment polarity protein 1 1 1
MIRT037607 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 1 1
MIRT037608 TOR2A torsin family 2 member A 1 1
MIRT037609 RPS6KA5 ribosomal protein S6 kinase A5 1 1
MIRT037610 SMYD4 SET and MYND domain containing 4 1 1
MIRT037611 TJAP1 tight junction associated protein 1 1 1
MIRT037612 IRAK1 interleukin 1 receptor associated kinase 1 1 1
MIRT037613 PPM1M protein phosphatase, Mg2+/Mn2+ dependent 1M 1 1
MIRT037614 EIF4A2 eukaryotic translation initiation factor 4A2 1 1
MIRT037615 GFER growth factor, augmenter of liver regeneration 1 1
MIRT037616 PKP2 plakophilin 2 1 1
MIRT037617 FARSB phenylalanyl-tRNA synthetase beta subunit 1 1
MIRT037618 OPRD1 opioid receptor delta 1 1 1
MIRT037619 CCNY cyclin Y 1 1
MIRT037620 CNOT1 CCR4-NOT transcription complex subunit 1 1 1
MIRT037621 CXCL16 C-X-C motif chemokine ligand 16 1 1
MIRT037622 CEBPA CCAAT/enhancer binding protein alpha 1 1
MIRT037623 DDX11 DEAD/H-box helicase 11 1 1
MIRT037624 URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) 1 1
MIRT037625 SBF1 SET binding factor 1 1 1
MIRT037626 GNB2 G protein subunit beta 2 1 1
MIRT037627 KMT2D lysine methyltransferase 2D 2 3
MIRT037628 DDX17 DEAD-box helicase 17 1 1
MIRT037629 SORBS3 sorbin and SH3 domain containing 3 1 1
MIRT037630 TAPBP TAP binding protein 1 1
MIRT037631 BCR BCR, RhoGEF and GTPase activating protein 1 1
MIRT037632 RPL18 ribosomal protein L18 1 1
MIRT037633 INTS3 integrator complex subunit 3 1 1
MIRT037634 CDC25B cell division cycle 25B 1 1
MIRT037635 LDOC1L retrotransposon Gag like 6 1 1
MIRT037636 TUB tubby bipartite transcription factor 1 1
MIRT037637 NUDT2 nudix hydrolase 2 1 1
MIRT037638 CDAN1 codanin 1 1 1
MIRT037639 MRS2 MRS2, magnesium transporter 1 1
MIRT037640 PYGB glycogen phosphorylase B 1 1
MIRT037641 LDLRAD3 low density lipoprotein receptor class A domain containing 3 1 1
MIRT037642 COL5A1 collagen type V alpha 1 chain 1 1
MIRT037643 ATF7IP activating transcription factor 7 interacting protein 1 1
MIRT037644 AGO1 argonaute 1, RISC catalytic component 1 1
MIRT037645 ZNF212 zinc finger protein 212 1 1
MIRT037646 TSC2 TSC complex subunit 2 1 1
MIRT037647 FASN fatty acid synthase 1 1
MIRT037648 NOL9 nucleolar protein 9 1 1
MIRT037649 CLUH clustered mitochondria homolog 1 1
MIRT037650 PHF8 PHD finger protein 8 1 1
MIRT037651 EIF4G1 eukaryotic translation initiation factor 4 gamma 1 1 1
MIRT037652 TRAPPC12 trafficking protein particle complex 12 1 1
MIRT037653 HOXC11 homeobox C11 1 1
MIRT037654 DGCR14 ess-2 splicing factor homolog 1 1
MIRT037655 SLC25A1 solute carrier family 25 member 1 1 1
MIRT037656 MEX3C mex-3 RNA binding family member C 1 1
MIRT037657 RAI1 retinoic acid induced 1 1 1
MIRT037658 LY6E lymphocyte antigen 6 family member E 1 1
MIRT037659 SEC16A SEC16 homolog A, endoplasmic reticulum export factor 1 1
MIRT037660 RPL37 ribosomal protein L37 1 1
MIRT037661 CNN2 calponin 2 1 1
MIRT037662 ALDH18A1 aldehyde dehydrogenase 18 family member A1 1 1
MIRT037663 POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) 1 1
MIRT037664 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT037665 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 1 1
MIRT037666 PTPMT1 protein tyrosine phosphatase, mitochondrial 1 1 1
MIRT037667 NCEH1 neutral cholesterol ester hydrolase 1 1 1
MIRT037668 ART5 ADP-ribosyltransferase 5 1 1
MIRT037669 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT037670 NCL nucleolin 1 1
MIRT037671 NCKAP5L NCK associated protein 5 like 1 1
MIRT037672 ZCCHC14 zinc finger CCHC-type containing 14 1 1
MIRT037673 CCDC71 coiled-coil domain containing 71 1 1
MIRT037674 SURF4 surfeit 4 1 1
MIRT037675 RPL13 ribosomal protein L13 1 1
MIRT037676 ACTN4 actinin alpha 4 1 1
MIRT037677 PA2G4 proliferation-associated 2G4 1 1
MIRT037678 MIF macrophage migration inhibitory factor 1 1
MIRT037679 UBE2N ubiquitin conjugating enzyme E2 N 1 1
MIRT037680 LYNX1 Ly6/neurotoxin 1 1 1
MIRT037681 TACC3 transforming acidic coiled-coil containing protein 3 1 1
MIRT037682 GSR glutathione-disulfide reductase 1 1
MIRT037683 GSK3A glycogen synthase kinase 3 alpha 1 1
MIRT037684 ZMYM3 zinc finger MYM-type containing 3 1 1
MIRT037685 ERP29 endoplasmic reticulum protein 29 1 1
MIRT037686 MATR3 matrin 3 1 1
MIRT037687 FANCG Fanconi anemia complementation group G 1 1
MIRT037688 FAM83G family with sequence similarity 83 member G 1 1
MIRT037689 DUSP18 dual specificity phosphatase 18 1 1
MIRT037690 MYC MYC proto-oncogene, bHLH transcription factor 3 2
MIRT037691 TSPAN7 tetraspanin 7 1 1
MIRT037692 ATMIN ATM interactor 1 1
MIRT037693 SEPT2 septin 2 1 1
MIRT037694 FOXRED2 FAD dependent oxidoreductase domain containing 2 1 1
MIRT037695 TECR trans-2,3-enoyl-CoA reductase 1 1
MIRT037696 MRPL11 mitochondrial ribosomal protein L11 1 1
MIRT037697 IP6K1 inositol hexakisphosphate kinase 1 1 1
MIRT037698 PSMD4 proteasome 26S subunit, non-ATPase 4 1 1
MIRT037699 SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 1 1
MIRT037700 CTNNB1 catenin beta 1 1 1
MIRT037701 TMEM189 transmembrane protein 189 1 1
MIRT037702 LDLR low density lipoprotein receptor 1 1
MIRT037703 OGFR opioid growth factor receptor 1 1
MIRT037704 ADAP2 ArfGAP with dual PH domains 2 1 1
MIRT037705 LIPA lipase A, lysosomal acid type 1 1
MIRT037706 SNAPC4 small nuclear RNA activating complex polypeptide 4 1 1
MIRT037707 FBN2 fibrillin 2 1 1
MIRT037708 ZNF704 zinc finger protein 704 1 1
MIRT037709 EIF3M eukaryotic translation initiation factor 3 subunit M 1 1
MIRT037710 SMC1A structural maintenance of chromosomes 1A 1 1
MIRT037711 FZR1 fizzy and cell division cycle 20 related 1 1 1
MIRT037712 NANOS1 nanos C2HC-type zinc finger 1 1 1
MIRT037713 PRR12 proline rich 12 1 1
MIRT037714 PHC2 polyhomeotic homolog 2 1 1
MIRT037715 NOP9 NOP9 nucleolar protein 1 1
MIRT037716 HM13 histocompatibility minor 13 1 1
MIRT037717 PRDX5 peroxiredoxin 5 1 1
MIRT037718 IRGQ immunity related GTPase Q 1 1
MIRT037719 TGFB1 transforming growth factor beta 1 7 2
MIRT037720 MARCH3 membrane associated ring-CH-type finger 3 1 1
MIRT037721 TBX2 T-box 2 1 1
MIRT037722 TSC22D3 TSC22 domain family member 3 1 1
MIRT037723 DUT deoxyuridine triphosphatase 1 1
MIRT037724 FAM171A2 family with sequence similarity 171 member A2 1 1
MIRT037725 FGFR1 fibroblast growth factor receptor 1 1 1
MIRT037726 FRAT1 FRAT1, WNT signaling pathway regulator 1 1
MIRT037727 PSMD11 proteasome 26S subunit, non-ATPase 11 1 1
MIRT037728 PABPC1 poly(A) binding protein cytoplasmic 1 1 1
MIRT037729 ENO1 enolase 1 1 1
MIRT037730 AP3D1 adaptor related protein complex 3 delta 1 subunit 1 1
MIRT037731 TUBA1A tubulin alpha 1a 1 1
MIRT037732 ULK3 unc-51 like kinase 3 1 1
MIRT037733 PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha 1 1
MIRT037734 SLC25A46 solute carrier family 25 member 46 1 1
MIRT037735 MED15 mediator complex subunit 15 1 1
MIRT037736 IRF2BP1 interferon regulatory factor 2 binding protein 1 1 1
MIRT037737 UBA1 ubiquitin like modifier activating enzyme 1 1 1
MIRT037738 ATHL1 protein-glucosylgalactosylhydroxylysine glucosidase 1 1
MIRT037739 CTNNA1 catenin alpha 1 1 1
MIRT037740 ADRM1 adhesion regulating molecule 1 1 1
MIRT037741 CCDC106 coiled-coil domain containing 106 1 1
MIRT054493 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 3 1
MIRT451195 PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 2 2
MIRT452931 DISC1 disrupted in schizophrenia 1 2 2
MIRT455468 LYPLA2 lysophospholipase II 2 2
MIRT457068 TOR4A torsin family 4 member A 2 2
MIRT464195 VGLL4 vestigial like family member 4 2 4
MIRT483030 KHSRP KH-type splicing regulatory protein 2 4
MIRT486062 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT486120 INO80E INO80 complex subunit E 2 2
MIRT486866 DPF1 double PHD fingers 1 2 2
MIRT488343 PAX2 paired box 2 2 2
MIRT488790 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT490249 MFI2 melanotransferrin 2 2
MIRT490264 HAAO 3-hydroxyanthranilate 3,4-dioxygenase 2 2
MIRT490756 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT492321 SETD1B SET domain containing 1B 2 2
MIRT492851 NRGN neurogranin 2 2
MIRT499604 ANKRD45 ankyrin repeat domain 45 2 2
MIRT500189 BARX1 BARX homeobox 1 2 4
MIRT516765 FAM212B family with sequence similarity 212 member B 2 4
MIRT517949 TRIM59 tripartite motif containing 59 2 2
MIRT521182 SCAF4 SR-related CTD associated factor 4 2 2
MIRT526462 OSBPL5 oxysterol binding protein like 5 2 2
MIRT535148 PLEKHG5 pleckstrin homology and RhoGEF domain containing G5 2 2
MIRT569528 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT570593 NFIX nuclear factor I X 2 2
MIRT571219 F2R coagulation factor II thrombin receptor 2 2
MIRT574145 MARVELD1 MARVEL domain containing 1 2 2
MIRT608758 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT649509 RAB17 RAB17, member RAS oncogene family 2 2
MIRT692165 RNF207 ring finger protein 207 2 2
MIRT703495 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT711081 NEUROD2 neuronal differentiation 2 2 2
MIRT712090 UNC13A unc-13 homolog A 2 2
MIRT712531 CYTH2 cytohesin 2 2 2
MIRT712755 GMDS GDP-mannose 4,6-dehydratase 2 2
MIRT712893 TGFA transforming growth factor alpha 2 2
MIRT714684 PRX periaxin 2 2
MIRT714723 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714814 NOB1 NIN1/PSMD8 binding protein 1 homolog 2 2
MIRT716774 C1orf229 chromosome 1 open reading frame 229 2 2
MIRT717511 HRNR hornerin 2 2
MIRT717653 THBS2 thrombospondin 2 2 2
MIRT719595 PIAS4 protein inhibitor of activated STAT 4 2 2
MIRT720525 PTGR2 prostaglandin reductase 2 2 2
MIRT724925 VPS18 VPS18, CORVET/HOPS core subunit 2 2
MIRT737146 NOS3 nitric oxide synthase 3 1 0
MIRT756003 SLC7A5 solute carrier family 7 member 5 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-744 Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-744 Tert-butyl hydroperoxide (t-BHP) NULL 6410 Microarray mouse auditory cells 20510889 2010 up-regulated
miR-744 Ursodeoxycholic acid (UDCA) approved 31401 Microarray rat Liver 20689055 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-744 Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901)
hsa-mir-744 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-744 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-744 Fluorouracil 3385 NSC19893 approved resistant cell line (OE19)
hsa-mir-744 Fluorouracil 3385 NSC19893 approved resistant cell line (KYSE)
hsa-mir-744 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-744 Cisplatin 5460033 NSC119875 approved resistant cell line (SGC-7901)
hsa-miR-744-5p [1,1'-binaphthalene]-2,2',3,3'-tetrol 316673 NSC245006 sensitive
hsa-miR-744-5p 4-n-[12-[(5-amino-6-chloropyrimidin-4-yl)amino]dodecyl]-6-chloropyrimidine-4,5-diamine 358989 NSC619196 sensitive
hsa-miR-744-5p 5,7-dibromo-2-[(e)-2-(4-hydroxy-3-methoxyphenyl)ethenyl]quinolin-8-ol 135460261 NSC67090 sensitive
hsa-miR-744-5p Benzyl 2-(dibenzylamino)-3-phenylpropanoate 375616 NSC655438 sensitive
hsa-miR-744-5p N'-[(Z)-[(4Z)-2-(1,3-benzodioxol-5-yl)-4-[[4-oxo-4-[2-(trifluoromethyl)anilino]butanoyl]hydrazinylidene]chromen-3-ylidene]amino]-N-[2-(trifluoromethyl)phenyl]butanediamide 6399328 NSC641210 sensitive
hsa-miR-744-5p Paullone analog 47 396411 NSC702373 sensitive
hsa-miR-744-5p Ursa-11,13(18)-dien-28-oic acid-3.beta.-ol 378695 NSC661747 sensitive
hsa-miR-744-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7, LY2)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-miR-744-5p Carboplatin 38904 NSC241240 approved sensitive High Ovarian Cancer tissue and cell line (MDAH-2274, SKOV3)
hsa-miR-744-5p Gefitinib 123631 NSC715055 approved resistant High Lung Adenocarcinoma cell line (A549)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Squamous Cell Carcinoma cell line (KYSE410)
hsa-miR-744-5p Tamoxifen 2733525 NSC180973 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-744-5p Vinorelbine 44424639 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-744-5p Epirubicin 41867 NSC256942 approved resistant High Breast Cancer cell line (MDA-MB-231)
hsa-miR-744-5p Erlotinib 176870 NSC718781 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-744-5p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-744-5p Sunitinib 5329102 NSC750690 approved sensitive High Renal Cell Cancer tissue
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-744-5p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (HepG2)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC-7901, BGC-823)
hsa-miR-744-5p Oxaliplatin 6857599 NSC266046 approved resistant Low Colorectal Cancer cell line (HCT-116)
hsa-miR-744-5p Bortezomib 387447 NSC681239 approved sensitive Low Multiple Myeloma tissue
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-744-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-744-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-744-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-744-5p Fluorouracil 3385 NSC19893 approved sensitive cell line (HCT15)
hsa-miR-744-5p 4-Hydroxytamoxifen+Tamoxifen sensitive cell line (LY2)
hsa-miR-744-5p Ethanol+Tamoxifen sensitive cell line (LY2)
hsa-miR-744-5p Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-miR-744-5p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-miR-744-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (MDA-231)
hsa-miR-744-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (PC3PR20)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-744-5p Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)
hsa-miR-744-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-744-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (H23)

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