Gene Symbol
SMAD2
Synonyms
JV18, JV18-1, MADH2, MADR2, hMAD-2, hSMAD2
Description
SMAD family member 2
Transcript
NM_001003652
Other Transcripts
NM_001135937
,
NM_005901
Expression
Putative miRNA Targets on SMAD2
3'UTR of SMAD2 (miRNA target sites are highlighted)
>SMAD2|NM_001003652|3'UTR
1 AG CTTCAC C A A TCAAG TC C C AT G AAA AGA CTTAAT GTA ACAA CTC TTCTG TCAT AGC ATTG TG TGTGGTCCC TA T GGACT
81 GTTT ACTAT CC AA AA GTTC AAGAGAGAAAACAG CACTTGAGG T C TC ATCAA TTA AAGC AC CTTG TGGA AT CTG T T TCCTA
161 TATT TG AATATTAG ATGGGAAAA T T A G TGTC TAGA A ATAC TC T CCCAT TAAAGAGGAAGAGAA GATTTTAAAGAC TTAA T
241 GATGTCTTAT TG GGCA TAAA AC TGA G TGTCC CAAAGG TTTATTAA TAACAG TAG TA GTTAT G TG TACAGGTAATGTATCA
321 TGAT CC AGTATCACAG TAT TGTGCTGT TT ATATACA TTTTTAG TTTGCATAGA TGAGGTGTGTGTGT G C G CT G C TT CTTG
401 ATC TAGGCAAACCTTTA TAAAGT TGC A GTACCTAATCTGTTA TTC CCAC TTCTCTGT TAT TTTT G TGTGTC TTTTTT AAT
481 ATA TAAT A TATA T C AA GATTTTCAAATTATTTAGAAGC AGA TTT T CCTGT AGAAAAACTA ATTTTTC T GCCTTTTACCAA
561 AA AT AAAC TCTTGGG G G AAG AAAAG TG GATTAACTTTTGAAATCCTTGA CCTTAA TGTGTTC AG TGGGGCTTAAACA GTC
641 AT TC T TTT TG TGG T TTTTTG T T TTTTT TTG T T T T TTTT T T T A A CTGCTA AAT C TTA TTATA AGGAA ACCATACT G AAAAC
721 C TTT CCAA GC CTCTTT TTT C C AT TCCCA T TTTTG TCCTCA T AAT CAAAACAGCA TAA CA TGACA TC A TCAC CA GTA ATAG
801 TTGCATTGATA CTGC TGG CAC CAGTTAATTCTGGGATAC AGT AAG AATTCATA T G G AG AAA GTCCCTTTGTCT TATGCCC
881 AAATTTCAA C AGGAATAATTGG CTTG TA T AATCTAGC AGTC TGTTGATT TA TC CTTCCACCTCATAAAAAAT GCA TAGGT
961 G GC AGTAT AATTA TTTTCAG G GATATG CTA GAATTAC T TC C ACATAT TTATCCCTTTTT A A AAAA GCTA ATCTA TAAATA
1041 CC G TTTTTCCAAAGGTATTTT AC A A TATTT CAACAGCAGAC CTTCTG CTCTTC G AGTAGTT T GATTTGG TTTAGT A ACCA
1121 G ATTGCA TTATGAAA TGG GCCT TTTGTAAATGTAATTGTTT C TGCAAAATA CCTAGAAA AGT GATG C TGAGGTA G G ATCA
1201 GCAGATAT GG GCCATCTGTTTTTAAAGT A TGTTGTATTCAGTTT A TAAATT GA TT G T TATTCTA CACA TA ATTAT GAATT
1281 C AGAA TTTTAAA AAT TGGG GGAAAAG CCATT TATTTAGC AA G TT TT TT A GC TTATAAGTTACCTGC A GTC TG AGCTG TTC
1361 TTAAC TGATCCTGGTTTTGTGAT T GACA A TATTTCAT GCTCTGTAGTGAG AG GAGATTTC C G AAACTC TGTTGCT A GTTC
1441 ATTCTGCAGCAAA TA ATTATT A T GTCTG A TG TT GA CT CA T TGCAG TTTAAAC A TTT CTTCTT G TTT G CA TC TTAGT A GAA
1521 ATGGAAAAT AACCACTCCTGGTC G T CTTTT C A TAA ATTT TCA TATTTTTGAAGCTGTC TTTG GTAC TTGTTC TTTGAA AT
1601 CATA TCCACCTGTC TCTA TAGG TATC ATTTT CAATA C TTT C AA C ATTTGGTGGTTTTC T A TTGGGTA CTCC C CAT TTT C C
1681 T A TATTTGTGTGT A TATGTA TGTGTTC A T G TAAATTT GGT A T AGTAATTTTTTA TTCATTCAA CAAA TAT TTA TTGT TCA
1761 CC TGTTTGTACCAGGA A CTTT TCT TAGTC TTTG GG TAAA G G TGAACA A GACAAC TAC AGTTC CT G CCTTTG CTGAGACA G
1841 CAGTTA CA CTA ACCC T TAATTATCTTAC TTGT CTATGAAGGAG A TAAAC AGGG TACTG T AC TGGAGAATAACA GATG GG A
1921 TGCTTCAGGTAGGACATC AAGGAAAGCCTCTAA GGAA AG G ATGCATGAGCTAACACCTGACATTAAA G AAGCAAGCC AA G
2001 TGAGGAGC CA GGGG AGATA AGCATTCCT GGCA AA GAGAAT AGCATCA A AT GC AAAAAG GTTCAC A CT AAAGGAAACTCCT
2081 GATT AGGT A TTAATGC TTTAT AC AGAAACCTC TA TACAAA TCC AA ACT TGAAGA TCAGAATGGTTCTA CAG TTCATAACA
2161 T TTTGAAGGTGG CCTTATT TTGTGA TAG TC TGC TTCA TGTGATT CTCACTA ACA TAT CTCC TTCCTCAA CCTT TG CTGTA
2241 AAAAT TTCATT TGCA C CACATCA GTACTAC TT AATTTAAC AA GCT TTTGTTG TGTAAGCTCTC ACTG T TTTA G TGCCCTG
2321 CTG CTTGCTT CC AGA CTTTGT GCTG TC C AGTAATTATGTCTTCCACTACCCA TCTTGTG AGCAGAG TAAATGTCCTA GGT
2401 A ATACCACTA T CAGGC CTGTA G GAGATA C TCAG TGGA GCC TCT G CCCTTCT TT TTCTTACT TGAGAACTTGTAA TGG TGT
2481 TAGGGAA CAGTT GTAGGGGC AG AAAACAAC TCT G AAAGTG GTAGAAGGTC CTG ATC TT G G TGGTT ACTCTTGCATTAC TG
2561 TGTT A G GTCAAGCAG TGCC TA CTA TGCTGTTTC AGTAG TGGAGC G C ATCTCTA CAG TTC TGATGC G ATTTTTC TGTACA G
2641 TA TGAAAT TGGGACTCA ACTC T TTGAAAACA C C TA TTGAGCAG TTAT AC CT GTTGAGCAG TTTACTTCCT G GT TGTAATT
2721 ACATTTGTGTGAA TG TGTTTGATGC TTTTTAAC GAG A TGATGTTTTTTG TATTTTAT CTA CT G TGG CC TGAT T T TTTTT T
2801 T G T TTTC TGCCC CTC CC CCCA T TTATAGGTGTGGTTTT CATT TTTCTAAG TGA TAGAATC CC CTCTT TGTTGAATTTT TG
2881 TCTTTATTTAAAT T AG CAA CATTACTTAGGA TTTATTC TTCACAATACTGTTAA TTTT CTA GGAATG ATGACCTGAGAAC
2961 C G AATGGC CATGCTTTC TA TCAC ATTTCTAAGATG A GT AATAT TTTTTC CA GTAGGTTC CACAGAGACA C C TTG GGG G CT
3041 GG CTTAGGG GAG GCTG T TG G AGTTCTCAC TGA CT TAG TG GC ATA TTTA TTCTGTACTGAAGAACTG CA TGGGG T TTCTTT
3121 TGG AAAGAGTTT CATTGCTTTAAAAAGA AGCTCAGAA A GTCTTTATAACCA CTGG TCAAC G ATT A GAAAAATA TAACTGG
3201 ATTTAGG CCTA CCT TCTGG AATAC C G CTGATTGTGCTC TTTTTATCCTA CTTTA A AGAAGCTTTCATGATTA GATTTGAG
3281 CTA T ATCA GTTAT ACCGATTATACC TT AT A ATAC ACA TTCAGTTAGTAAAC AT TTAT TGATGCCTGTTG TTTGCCCAGCC
3361 ACTGTG ATGGATATTGAA TAAT AAA A AGATGAC TAGGAC G GGG CC CTGACC C TTGAGCTGTGCT TGGTCTTGT AG AGGTT
3441 GTG TTTTTT T T C C TC AGGACCTG TCACTT T GGCAGAAGG AAATCTG CC TA ATTTTTCTTGA A AGCT AA ATTTTCTTTGTA
3521 AG T TTT TACAA AT T G TTTA ATAC CTAGTTGTATTTTTTA C CTT A AGC C ACAT T GAGT TTTGCTTGATT TGTC TGT CTT TT
3601 A AACACTGT CAA ATGC TTTCCCTTTTGTT AAAATTATTTTA ATTTCAC TTTTT T T G TG C CCTT G TCAAT TTA AGA CTA AG
3681 ACTT TGAAGG TAAAACAAACA AACAA ACAT CAG T CTTAG TCTCTTGCTAGTTGAAATCAAATAAAA GAAAA T A TATAC CC
3761 A GTTG GTTTCTCTA C CTCTTAA AAGCTTCCC A TA TATAC C TTTAAGATCC TTCTCTTTTTTCTTTAAC TA CTAAAT AGGT
3841 TCA GCATTTATTCA G TGTT A GAT AC C C TC TTC G T CT GAGGGTGGC G TA G GT TTA TGTTG GGATA TAAAGTAACACAA GA C
3921 AA T CT TC A C TGTACATA AAATAT G TCTTC A T GT ACA G TCTTT A CTTTAA AAGCTG AACATTC CAATTTGC G CCTTC C CTC
4001 CCAAGC CC CT G CCCACCAA G TAT C T CT TTA GATATCT AGTC T GTGGACA TGAA CAATG AA TACT TT T TTC TTACTC TG AT
4081 C G AAGGC ATTGATACTTAG ACATA T CAAACAT TTC TTCCTT TCA TA TG CTTTA C T TT GCTAA ATC TA TTA T AT TC ATTGC
4161 C TGAATTT TATTC TTCC TTTC TA CCTGAC AA CACACATC CAGGTGGT ACT TG CTGGTTA TCCT C T TT C T T G T TA GC C T T G
4241 T T T TTT G T T T T T T T T T T T TT TTT T T G A G AGG GA GTCTC G CTCTGTTGCCCAA CC TGGAGTGCAGTGGTGC G AT CTTGGTT
4321 CACT GCAAG CTCC G CC TCCC G G GTT CAC G CCATGC TTCTGCC TCAGCCTC C CAAGTAGCT GG GACTAC AGGC G CC CACC A
4401 CCA C AC TC G GCTA ATTTTTTG TATTTTTA GTAGAGAC G GGGTTT C ACC G TGTTGG C CAGG A TGGTCTC G A TCT CCT GACC
4481 TC G TG AT C TGTCCA C CT C G GCTTCCCAA A GTG CTGG GA T TACAGGCAT GAGCCA CC G C G CCCAGC C TAGCCATATTTTTA
4561 TCTGCATA TA T CAGAATGTTT CTC TC C TT T GAACTTAT TAA CAAAAAAG GAAC A T GCTT TTCA TAC CTA GA GTC CTAATT
4641 TCT TCA TCATG AAG GTTGCTA TTCA A AT TGATCA A TCA TTT TAATT TTACAA A TGGCTCAA AAATTCTG TTC A G TAAATG
4721 T C TTTGTGACT GGCAA ATGG C ATAAA TTA TG TTTAA G A TT ATGA ACTTT TCTGACAGTTGC AG CCAA TG TTTTCCCTAC G
4801 ATACCAG A TT TCC A TCT TGG GGCATATTGGAT T GT T GT ATT TA A GACAGT CAGA A TAATGAT A GTGTGT GGTCTCCAG AG
4881 G TAGTCAGAATCCTGCTA TTGA GTT CT TT TTAT A TC TTCCTTTTCAAT TTTTTATTA CCATTTTGTTTGTTTAG ACTAC A
4961 C TT T GTAGG GATTGAG GGGCAAA T TATCTCTTG GAGTG GAAT TCCT GTGTTTTGAG C CTTAC A A C CAG GAAATA T GA GCT
5041 A TACTAG AT AGCC TC A TGA TAGCAT TTAC G ATAAG AACTTA T C TC G TGTGTTCA TGTAAT TTTTTGAGTAGGAA CTGTTT
5121 TATCTTGAA TA TTGT A GC TAACTA T A TATA G CAGAACT GCCTCAGTC TTTTTAAGAAGGAAATAAA T AAT A T AT G TG TAT
5201 GAA T TTAT A TAT ACATA T ACA C T CAT AGACAAACTTAAC AGTTGGGGTC A TTCTA AC AGTTAAAACA A TTGT TCCA T TGT
5281 T TAAATCTCAG ATCCTGG TAAAATGTTCTTAATTT GTCT GTG TACA TTTTCCTTTC ATGG AC A GACC ATTGGAG TACA TT
5361 AATTTTCTTA AT C TGC CAT TT G G C AG TTC ATT T AA TAT AC C A TTTTTTGGCAACTTG GT AACTAAG AA TCA CAG CCAAAA
5441 T T TGTTA AC ATCAAAGAAAGC TCTGC CA TA TAC CCC G TTACTAA ATTAT TATA C ATCC AGCAGATTCTGG GATG TACTAA
5521 CTTAGGGTT AACTTTGTTGTTGT TGA TAATACTAGA TT GCTC CC TCT TTAA TT CTTCTTCTG GTGCAAGG TTGCTGCTTA
5601 AGTTACCCT GGGAAATAC TA CTA CA AG GTCAA ATTTTCTA GTATCTT AC AGC CTG ATTGAAGG TG A TTCAGAT C TTTGCT
5681 CAA TA TAAA TGGATTTTCCAAGA TTC T CTG GGCCA TCCTTGAC CC A CAG GT GA TCTC G C TGGA GTA TATTAAC T TAAC TT
5761 C AG TGCC A G TTGG TTTG GTGCCATG AGATCCATAA T GAATCCAGAAC TTC ACCA TTGCTTAG A TA TA AG A GTC C CTTGGA
5841 AG AATAATGC C ACTG ATG A TG GGGGTCAGAAGGTGTAT T AACTC AA CAT AGAGG GCTTTTAGATT TTTCTTC AAAAAAAT
5921 TTC G AG AA AAGTA TTC TT TTA C C CTCCAAA C AG TTAACAGCTC TTAGTTTCTCCAA A TA TGCTCTTTGATTTA CTTAT TT
6001 TTAA TTAAAG A TGGTAATT T A TTGAACAA TGAAA TCC G TAAT A TA T TG A TTT AAGG A CAA AAGTG AAGTTTTAGAAT TAT
6081 AAAAG TA CTTAAA TA T TAT ATATTTTCCA TTTCATAATTGTTTTCCTTTCTCTGTGGCTTTA AAGTT T TTGACT A TTTT A
6161 CAA TGTTAATCAC TA GGTAACTTGCC ATATTTCTGGTTCTATAT TAAGTTCTAT CC TTTATAATGC TGTTAT TAT A AAGC
6241 T GGTT TT T AGC ATTTGTC TGTAGC AA TAG AAATTT TACTAAG TCTC TGT TC TCCCA GTAAGTT TTTT CTTTTCTC AG TAA
6321 GT C CCTAA GAAA ACA T T TGTTTGCCACTCTTACTATTCCC AATCT TGGATTGTTC GAGCT GAAA AAAAATT TGATGAGAA
6401 ACAGGAGG ATCCTTTTC TG GTGAA TA TAG G TTCCTGCTTTA AGAATGTGGAAATCCATTGCTTTATA TA ACTA ATAT ACA
6481 CACAG ATT AATTAAA ATTGTGAG AA ATAATTCACAC ATGACAA GTA G G TAACA TG C A TGAGTTT TG AA TTTTTTT A AAAA
6561 CC CAACTGTTT G ACA A AATAT AG AA CCC AAAT TGGTACTTTC TTA G AC CAGTGTAAC C TCA CA C CTCAGTTTT GCTTTTC
6641 C AA C CCTGACTTGAAAGGC A TAT TTGTATCTTTTTATTAGTGAT AGTGA AGC TGTGACA CTAA C C TTT TAT ACAA AAGAG
6721 TA AAGAAAG AA A A AC TACAGC GAT TAAG ATGAG AACA GTTC T G CAGTTGT TGAAC TAGAT CACAGCA TT G TAG GCAGAAT
6801 AAAAAATG TTC A TA TCTGAGAATATTCCTTTC GCC AT CT T TTC CC AAG GCCAGACCTCC TGG TGGAGCACAGT TAAA AGT
6881 AACATTC T G GGCCTTT GTAA TC GG AGGG C TG TGTC TCCAGCTG GCAGC C TTT GTTTTAATATATAAT GC AGG A CTGTGGA
6961 AAAC AGTT GGC A TA GAATATT T TCACCTAAAAAAGAAAGAAAA GAC A T A C AAAAC TGGATT AA TT GCAAAAAGAG AA T AC
7041 A GTAAAAT ACCATA TAACT GG ACAAAGCT AG AAGAACCTT T A GAAGAT TTGTC TGAAAAC AGATTTC AAGAG T GAGCTTT
7121 TA TA C ACTGCTC ACTA ATTTGCTTG A TTACTA CCAA CTCTTCTTAAAGTTAAC A C G TT TAA G G TAT TTCTGGACTTC CT A
7201 GCCTTTT AGCAAG C TTAGAGGAACTA GCCATTA GCTAGTG ATG TAAAAATATTTTGG GGACTGAT GC CCTTA AAGG TTAT
7281 GCCC TTGAAAGT TCTTA CCT TTTC T C TAG TG ATA T TAAG G AAC G AG TGGGTA GTGTTC TCAGG GTGACCA GC T G CCCT A A
7361 AGTGCC TGGGAT TGAGGG TTTCCCTGGATGC G GGACT TT C C CTG GA TA CAA AACTTT TA GCA GAGT TTTG T ATATA T GTG
7441 G ATTTTTCTG ATAAGTA GCAC A TCAGAGGCCTTAA CCACTGCCCAAA AGC G ATTCTC CA TTGAGAG TACA TAT CTT GAAC
7521 T TA A G AA ATT C ATT TG CTC TG ATTTTTAA TC TTGT A AAGTT TTTGCTA AACTCA AAACAAG TCC C AGGCA CA CCAGAAGG
7601 AG CTGAC CACC TTAG G TGTT CTTG TGATTTATC CT T ACTTCCCTA TG TTGTCA TAGTTGCTTCTAAAC TC AGCT G CAC TA
7681 TGGCTGTCAA CATT TCTG ATA CTTAT TGGG A TATGTG CCA T C CAGTCATTTAGTACTTTGAATGGAACATGAGATTTATA
7761 ACACAGGTAATAGCTGAAGGTACCAGTATGGTGGTGAGACTCACACTTAGTGATCCAGCTAAGGTAACTGATGTTATAAT
7841 GGAACAGAGAAGAGGCCAACTAGATAGCTAAGTTCTTCTGAACCTATGTGTATATGTAAGTACAAATCATGCGTCCTTAT
7921 GGGGTTAAACTTAATCTGAAATTTACATTTTTCATAGTAAAAGGAAACCAATTGTTGCAGATTTCTTTTCTTGTGAGGAA
8001 ATACATGGCCTTTGATGCTCTGGCGTCTACTGCATTTCCCAGTCTGTTCTGCTCGAGAAGCCAGAATGTGTTGTTAACAT
8081 TTTTCCGTGAATGTTGTGTTAAAATGATTAAATGCATCAGCCAATGGCAAGTGAAGGAATTGGGTGTCCTGATGCAGACT
8161 GAGCAGTTTCTCTCAATTGTAGCCTCATACTCATAAGGTGCTTACCAGCTAGAACATTGAGCACGTGAGGTGAGATTTTT
8241 TTTCTCTGATGGCATTAACTTTGTAATGCAATATGATGGATGCAGACCCTGTTCTTGTTTCCCTCTGGAAGTCCTTAGTG
8321 GCTGCATCCTTGGTGCACTGTGATGGAGATATTAAATGTGTTCTTTGTGAGCTTTCGTTCTATGATTGTCAAAAGTACGA
8401 TGTGGTTCCTTTTTTATTTTTATTAAACAATGAGCTGAGGCTTTATTACAGCTGGTTTTCAAGTTAAAATTGTTGAATAC
8481 TGATGTCTTTCTCCCACCTACACCAAATATTTTAGTCTATTTAAAGTACAAAAAAAGTTCTGCTTAAGAAAACATTGCTT
8561 ACATGTCCTGTGATTTCTGGTCAATTTTTATATATATTTGTGTGCATCATCTGTATGTGCTTTCACTTTTTACCTTGTTT
8641 GCTCTTACCTGTGTTAACAGCCCTGTCACCGTTGAAAGGTGGACAGTTTTCCTAGCATTAAAAGAAAGCCATTTGAGTTG
8721 TTTACCATGTTAAAAAAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
miRNA-target interactions (Predicted by miRanda)
ID
Duplex structure
Position
Score
MFE
1
miRNA 3' guguUGG--GAUC--ACCGCGGUAa 5'
:|| :|:| |||:|||||
Target 5' cagtGCCAGTTGGTTTGGTGCCATg 3'
5761 - 5785
137.00
-15.10
2
miRNA 3' guguugGGAUCAC------CGCGGUAa 5'
|:|| || |:|||||
Target 5' ctgataCTTATTGGGATATGTGCCATc 3'
7696 - 7722
129.00
-10.90
3
miRNA 3' guGUUGGGAUCACCGCGGUAa 5'
|| :|| | | ||||| |
Target 5' aaCATTCCAATTTGCGCCTTc 3'
3976 - 3996
127.00
-12.60
DRVs in gene 3'UTRs
SNPs in gene 3'UTRs