Gene Symbol |
AGO1
|
Synonyms |
EIF2C, EIF2C1, GERP95, Q99, hAgo1 |
Description |
argonaute 1, RISC catalytic component |
Transcript |
NM_012199
|
Expression |
|
Putative miRNA Targets on AGO1 |
|
3'UTR of AGO1 (miRNA target sites are highlighted) |
>AGO1|NM_012199|3'UTR
1 AGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGC
81 AAGGAGGAGGGAGGTGGGGTAGGGAGGAGTGTAGGATGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAG
161 GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGATATCAACCTCATGTCCCCCACCCCTCACCCCATCTTGTCACATC
241 TGGCCCTGACCCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACCATACACACAGGTGTCTCATGTGACTCACAGTGCT
321 AAAGACTCATGCTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGCAGACAAAAGCTGGTTAGGTTTGGGTTTGATACT
401 TTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGGAGGGAAGGATTTTTTAGGAGCCTTAATCAGAAAAGGACT
481 AGATTTGTTTAAGAAGAAAAATGAAACCAGACCCAGATCAATATTTTAGGATACTAGATGTTTTAATGGGTTCAGAATCC
561 AGTTTGTAGGAAGATTTTTTAATGGTTTTGGTTGCTCCTCCCCCAGCTGCCACCCCCCACCTTACCCTTATTCCTCTCTG
641 TCCACATTTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATACTTAAGGCACTATGGCACTT
721 AGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCA
801 GAACTGCAACCTTTTGTACCTTTCTTTGGGGAATGGGGTGGGGGTGGGAGAGGAGGTAGATGGGGAAGAAATACCCCAGA
881 CCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTGACTTCCTCATTCATTGAGCTTTTTAAAAG
961 ATCACAACCTCAAGATGGTTAAAATCCATTGACATTTGCACTTTCAAACATGACAAGTCTCGGAGCTGCTGAGATGACAG
1041 GCCCCTGGCCTTTCCACTTATGCCTCCTTTTCTCCTTATTCCTCCTACCTCCCGCCCCGCCCAGGTCTGGAGTTACTTTC
1121 ATAGCATTTTTCACTCTTGGCTTCTTTTCTCCCTTGATGGTCAAGTCTCTTATGTTTCAATATTTCTTAACTGGGGTGTC
1201 TTATAACAAAAAACTCTTAGGTCTAAAATGAGAAAAAAGAGAGAAAACAAAATGTTATTTTTATACCATAACTTGAGTGT
1281 ATTGCCAAAATTTGGAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCC ATCAGAATGAACTGTGTA
1361 CCTGATTTGTTCTCTGACCTGGCTAGGTAGGGAGGGGGTGGTTATCGCCCCAAGATGGGGTCCAGGCTCCATCCTTCCTC
1441 TGTGCAGATAATACCTTTTTCTTGCTATAGCCTCCCTCCTCTGCACTGTCCTGCACTCTTTCTTGCAAGTGCATCTTTTT
1521 CCTTCCCCTGGACTGTCCTCTGACCCTTTGGCTCATCCTAGATTGCAGTGTGTCCTGTGGACAGGCTGGGGAATTTTGCT
1601 GCTCCCTATTGCTTCTGTTTACAAAAATGAATTTTTCCTGGTTTCCCACTAGGGCATGTGGGTGGGTGGCATGGACTTTT
1681 TTTTTTTTTTTTTTTTGTCTTGAGACATGGGGTTTGGCTGTCTTGCAGGACTGGAGAAGGTGGTGGTTCTAGCTTGGTCT
1761 CTGTTGGCCTTGAAGCAAGCATCCCCCCTGCCCTTTTTCCTTGACTGTTCATTTTTTTCCTGCCCCACTGCTTGGGATGG
1841 GGAGTTGCAACTTCAGTGTGGAATTTCCTCTTTGAGGAGCCTGGGCTTGGATCTATCCTGATCTGGTGATGAAGCCATGA
1921 TTACTTTAGACCTAGCCCAGGCTTGGAGGCCAGCTGGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACC
2001 ATTTCCTCCCCTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCTATCCCAGGTTCTGTTCTGGTTGGCT
2081 ACATTGTTCAGCAACTCACAAAACGTAGCACAAACATTCATTATGGAGAAAGCATCAGGACTGTTGAGTAACTCCTCCTT
2161 TACTTTTTTCCTGCTGGCTACAGCATGGGGTGCCCTATAGGCACAAGCCCAGCTGAAGAACAGAATGGAGGGCTCTGGGA
2241 GGAGGCAGCTCACTGGAGAGCCTACATTCCTTACACAAGTGCCTAAAGAGAGTGATGCTAACACTCCATCTGCCCTGTCC
2321 ATTGCCTTCATATACAGTCTACTTCGTGTTCTGTCACCCTTTGGGGAGGGGAGTTCTCCTGGGACAGTGGGCTCTGCATG
2401 TTCTCCACTTGGATACATTTTGGGGCTAGGATCAGGGCACTATTCCTGGAGGGTCCAGTCATTCACCAGCATTTGCAAAT
2481 GTCCATAGGGAGCAGGTGGCAGCCTCTACTCCCAGCAACAAGTTTGTGTTCTCTCCTTTTCTCTCTTTGCCTCACTCTCT
2561 CCAGTTGGTTTTCAGCTGGGGCTTGAAATGCATTTTTAGCCCTTTGACGTGGCTTATGCCATTCAAGAAATAAAAAGCAA
2641 GAGAATCAGCTTTGGGCAATGACAAGAAATGAGTTCTTACTCTGATTTTTTTGTAAAAAGATAATTTTTGAGACTTGAAA
2721 AATACCCCGACCTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTGGCAGCAAGCTTTGGC
2801 TCATGTGGATTTGGTTTAAGTGGTGCTTCTTACCCAAGCTTCAAGGAAGTGCTTGGGGGACCCCCAGCCTCATCCTCTTA
2881 GTTGGGTCTCTTGTTCCCTTTGTACCACTGTTTTGCCTTCCTTTTCCTCTTCTCTCTTTGCCTGGCTTCCTTTCCCTTTT
2961 CTTCTATTCACTCTGCTTGCTTGCTGGCCGGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGTCTGCCTATGTGATGAT
3041 GAAATCTCTGCATGGCTGCAATGATCCCACTGTTAGCTGGCAGGGTCAGGCTTAGCTCCTTGACTGCAGAAGACCAAGAA
3121 CCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGACTGCCCTCAAGCTTATACTAGAGAAGAGCAACTGACCTGCCC
3201 AACTTGTGTGAAGTCAGGAGGGTTTCTGGCATTTTCCACACCTGTCCACTCCTTGGAGCTGGTTTCTCTCATTGCTTTTT
3281 CTAAATCTGGTTCTTTTTCTCTTTACCTGGGGCCTGGCTTTTCTGAGATTGTCTTAGGGTTGAGCTATTTGGGTATCCTG
3361 GGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAGAGTGATGAGAAGAGAATGGAGAGAATTTGAATAAAAGGTGGGAA
3441 AGGAGAGCACTGTTCTTTGATTGTTTATCCAGTCCAACCTGATCCATTAGGGATCGAGGTGCTACACTGGCCTCCAGGGA
3521 TAAGCCTGGGGCTACTGTTGCTGGGAACTTAGGCTTAACATAAAGCCGAAGAAGGTACCTAGAAATTTGAAACTTCCCTA
3601 AAAAGCTCCTAATGCCCACCTGCTAGATAGCTTCTCTGTGGCCTCCTATTTAGCTAAGCAGCAGTGTTTTTGGATACTTT
3681 TTTTTTCTGTTTGTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGGCCCATAGGATAT
3761 CTGTAAGGCTGGTGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTTCCCCATCAGGGTAG
3841 AAAAATCATCTCAAACTAGCCAAAAGGCAGTTTTGGAAACTACATTGGGGGACGTTATTTTTATTTATATATGGGGCCTA
3921 GGCCAATCCAGGATGGTAGCTGGAATACCTTCCTTCTTAAAATCTGATCATGGCAGGGATATGCAGGGCACTTTTTACTA
4001 TTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGACTTGCCTTCTCCC
4081 TGGGCAGGGAGAGAGGCTGGGTTGGTGCTCTCCCTTACTCTACTCATACTGACTTAGAGCCTCTGGCTGCTGTTTGGGCA
4161 TCCAAGAAAGGGAGGGGAAGGAATGAGCTAAAAACAAAACAGAATGAGGTGGGAAAGGGAGATTTTCTTCTTTACAGAGG
4241 AAAATAGGAAACCCTCCAAGAATTGTGCAAGTAAAGACATTTGTTGAATGCACTGAGTCCCTTGGTGTAGTAGCAATAAG
4321 GAAAAATGAAATTACTTTCCTGTGCACACAGTCCAGCCTAATTGGTATGTGATGTTGCACTTAGCAGCCATGTGGTGGGC
4401 ATGTGTGACTACTCTGGTTTTCACTTTAGTTTCTAAACTTTTTATCCCTCTCAAGTCCAGCATGGATGGGGAAATGTCTC
4481 TGGATCCCCACAGCTGTGTACTTGTTTGCATTTGTTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTT
4561 GTCCAGTCCATTGTGAAATTATCCCAGCAGCTGTAATGTACAGTTCCTTCTGAAGCAAGCAACATCAGCAGCAGCAGCAG
4641 CAGCAGCACAATTCTGTGTTTTATAAAGACAACAGTGGCTTCTATTTCTAAAAAAAAAAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' ugacuccccGGAGUCUGGCUCGa 5'
|:|:||||| |||
Target 5' ccatgattaCTTTAGACCTAGCc 3'
|
1915 - 1937
|
130.00 |
-15.50 |
2
|
miRNA 3' ugacuccccGGAGU--CUGGCUCGa 5'
||||| |::||||
Target 5' aattgacttCCTCATTCATTGAGCt 3'
|
927 - 951
|
120.00 |
-17.00 |
3
|
miRNA 3' ugACUCCCCGGA------GUC----UGGCUCGa 5'
||| | |::| ||| |::||||
Target 5' ccTGATGAGTTTATATCCCAGAAACATTGAGCc 3'
|
1310 - 1342
|
117.00 |
-13.60 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|