miRTarBase - #MIRT051420


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pre-miRNA Information
pre-miRNA hsa-let-7e   
Genomic Coordinates chr19: 51692786 - 51692864
Synonyms MIRNLET7E, hsa-let-7e, let-7e, MIRLET7E
Description Homo sapiens let-7e stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7e-5p
Sequence 8| UGAGGUAGGAGGUUGUAUAGUU |29
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1189776118 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DGCR8   
Synonyms C22orf12, DGCRK6, Gy1, pasha
Description DGCR8, microprocessor complex subunit
Transcript NM_001190326   
Other Transcripts NM_022720   
Expression
Putative miRNA Targets on DGCR8
3'UTR of DGCR8
(miRNA target sites are highlighted)		 
>DGCR8|NM_001190326|3'UTR
   1 GGGAGGTGGCACGGGCCAGGGCGCGGGGGCCGCCAGCCGCACTTCTGAGGAGACCAGCAGTCATGCATCGTGCACCACAG
  81 TGTCAGGCCTCCAACCCACGCTCCTTCCCTGTGGCCAACCTGTGGGCCCGGCCTTAGGGTGGAGGCTTTAGTGTACAGGG
 161 ACAGCCATGGCCACACAGCACACATGTGGAGCAGCGGCTCTCCCTGGAAAGCTCCAGGCCTGAATGGATGGACTCAGCGA
 241 CTGCACCAGTGGCAGCTGGTGACTGTGGACAGTGGTGGACCCTGCTTCTGTGCACCTGCTGCAGGCTCTTTTTATGAAGG
 321 CTTTCATGAATTTTAGTATGTAATACGCACTGACGACACATGATGCTTGGATGACAGATGAGAGGGGATGGCTGAGTCCT
 401 GTGGCTGGCCCGTGATGCCAGGTGGCCCATGTGCCCAGGGCGCCTGCAGGGCTGCTACAGGGACCTGGTCAGGAGGTGCA
 481 CATGGTGCCCTGCCCTCACCCACCCTCTGTGTTTCCCCTTCTTTGAAAAGGTAGAAGAGAAAGGAATATTTTAAACCTTT
 561 TTGGCTTAAACAGAATTTTAGCATCAGAACTAGCTTTCTGGGATTGGAGGCAAACCATCAAGGTGGTCCCTCTCCAGTCT
 641 GGACACGATGCCAGCAAGGATGACGTCCTGCCACCTCCTGGAGTTACCCTGGCCTCCTAGGGTCCCTTTTTCTGATGAAG
 721 TCTTAATTCCCTAAAAGCGCCTCTTTGGACACTGAGGCCCTCTCTGCCTTTCCTGGCCTCCGGCAACAGTTTTTTACAAA
 801 GATTTTTTGCAGTCGAGTCCATATGTCCACCCATTGATTTTTAAAGCTTTTGTGATATTTTAGCATTTTGAAAGACTTTC
 881 ACAGTGAGAGTAGAAGGTAGATTTGGAATCATGCATTTTAGCAAGTGGACTTGTTGAAACAGGAAGCAAGGGCCTTCAGT
 961 GTAGCCCATTCTTGATCCAGAGCTGTTGCCTGTGACAGCGGTTTCTCTGGATGTCAAAGGCAGCTGCCTGGTGCCCAGCT
1041 TGCTTCTCGACTGGTGGCCCCTATGGGTGGGTGTGCGATGGAAATGTGTTCCTGCCGGAGTCTGAGGCACCAGGGTGTGC
1121 TCAAAGGCTGGCCCTGGTGGTGGACTGGCACCTGTGCAGAGTGCCGTGTGCTTGTGGTGCGCCATCTGAAGCAAGAGTCC
1201 AGCGTTCTGCCGTGTCTGTCCCCCACCATGCCCCCTACAGGCGGTACTGATGGCGCTTTTTTTTTTTTTTCTGTCAGGAA
1281 AACAATGTTGGCCTGTGGGCCGCCCACAACATATCCTTCCCTCACTACCTGTGTGACCAAGGTTGGCTTCTGTTGACCTT
1361 TAAAAAAGAAACCCTCAACTCAAATTGCTATAATTAGACACTTGCTTCTGTCTTGCCTCCTGTCTGCAGCTGTGAATAGT
1441 CATTTGACTGTGACTGTTGCCCTTAGCCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGTTCCCCTAAAGG
1521 TTGGGGAGCCTCGCTGTGTCTTGCTGTTCCCAGGCACCACCACAGCAGGTGCTGCCATACTCTTGTGGTCTCTGTGCGCC
1601 CCCCCCCCCCCCCCACCCGTCTGCCAAGCATGGGTATGAATCGTGCACACAGCCATGCTTCAAGGCCGGGGCAGGGGAGC
1681 CTGTGCTGATGCCATCCAGGGCACTGGGCTGTGCCTGGAAGGCGAGCCTTGATTGTCTGAACACATAAAGCAAACTGTCC
1761 AGAAGGGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uugAUAUG-UUGGAG-GAUGGAgu 5'
             ||| |   |||| ||||||  
Target 5' acaTATCCTTCCCTCACTACCTgt 3'
 1309 - 1332 135.00 -13.00
2 
miRNA  3' uugaUA-UGUUGGAGGAUGGAGu 5'
              || ||: ||| | ||||| 
Target 5' aaggATGACGTCCTGCCACCTCc 3'
 656 - 678 130.00 -14.30
3 
miRNA  3' uuGAUAUGUUGGAG-GAUGGAGu 5'
            ||: | : |||| ||:|||: 
Target 5' caCTG-AGGCCCTCTCTGCCTTt 3'
 750 - 771 123.00 -16.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31521874 5 COSMIC
COSN30547722 13 COSMIC
COSN26594124 28 COSMIC
COSN30508294 31 COSMIC
COSN23509799 37 COSMIC
COSN31511904 59 COSMIC
COSN21085449 120 COSMIC
COSN10028166 271 COSMIC
COSN31513735 348 COSMIC
COSN31591642 409 COSMIC
COSN31577182 434 COSMIC
COSN9161771 560 COSMIC
COSN26580112 666 COSMIC
COSN16266546 779 COSMIC
COSN26647861 787 COSMIC
COSN31570112 801 COSMIC
COSN31603702 1015 COSMIC
COSN20117152 1271 COSMIC
COSN1895018 1272 COSMIC
COSN31944829 1349 COSMIC
COSN25400814 1410 COSMIC
COSN28834545 1601 COSMIC
COSN9161772 1763 COSMIC
rs1640299 729 GWAS
rs417309 914 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs750418706 1 dbSNP
rs745320553 5 dbSNP
rs1242417957 7 dbSNP
rs1336852891 10 dbSNP
rs181969325 13 dbSNP
rs374730045 14 dbSNP
rs973816910 19 dbSNP
rs184423008 20 dbSNP
rs1235480364 21 dbSNP
rs200350084 23 dbSNP
rs1345613763 24 dbSNP
rs762122337 25 dbSNP
rs189179345 26 dbSNP
rs1458887762 28 dbSNP
rs1198918256 30 dbSNP
rs368530346 32 dbSNP
rs773446582 33 dbSNP
rs1198127750 36 dbSNP
rs1200351922 37 dbSNP
rs760707074 39 dbSNP
rs766451548 40 dbSNP
rs752574209 41 dbSNP
rs758322011 43 dbSNP
rs764009270 44 dbSNP
rs756228599 47 dbSNP
rs1284234133 49 dbSNP
rs546867888 50 dbSNP
rs934541483 53 dbSNP
rs1351540676 55 dbSNP
rs1255517493 56 dbSNP
rs1231644953 64 dbSNP
rs566573058 67 dbSNP
rs1184624080 69 dbSNP
rs1255845954 70 dbSNP
rs538636096 71 dbSNP
rs1399854554 73 dbSNP
rs1339430180 76 dbSNP
rs1296015693 77 dbSNP
rs1401908333 88 dbSNP
rs1053068826 89 dbSNP
rs1385003952 99 dbSNP
rs41281423 100 dbSNP
rs947276092 101 dbSNP
rs1044219039 102 dbSNP
rs1431364404 103 dbSNP
rs1003605105 108 dbSNP
rs1199881881 108 dbSNP
rs893070787 110 dbSNP
rs1364869462 112 dbSNP
rs1255486988 119 dbSNP
rs575672081 119 dbSNP
rs143543208 124 dbSNP
rs556910944 130 dbSNP
rs1264369248 131 dbSNP
rs1386038840 138 dbSNP
rs1470724740 147 dbSNP
rs997258251 153 dbSNP
rs1280526516 158 dbSNP
rs1432399604 161 dbSNP
rs763995034 164 dbSNP
rs1326674778 169 dbSNP
rs886471764 177 dbSNP
rs1028689968 184 dbSNP
rs1378222254 186 dbSNP
rs1265982955 188 dbSNP
rs771636637 191 dbSNP
rs775008487 196 dbSNP
rs181232565 197 dbSNP
rs1169440016 200 dbSNP
rs1475825771 201 dbSNP
rs963870403 205 dbSNP
rs1462749850 225 dbSNP
rs996310968 228 dbSNP
rs1029167323 233 dbSNP
rs5993917 234 dbSNP
rs1227860519 237 dbSNP
rs953752808 239 dbSNP
rs1325950475 245 dbSNP
rs1204599034 246 dbSNP
rs1275487178 249 dbSNP
rs962335974 256 dbSNP
rs986558441 257 dbSNP
rs1019682979 260 dbSNP
rs1283301137 262 dbSNP
rs955755974 264 dbSNP
rs972692295 267 dbSNP
rs753768216 276 dbSNP
rs989130282 278 dbSNP
rs914462237 281 dbSNP
rs918095428 282 dbSNP
rs947309748 293 dbSNP
rs1330624959 302 dbSNP
rs971302621 303 dbSNP
rs1413306198 306 dbSNP
rs879036823 307 dbSNP
rs1446695065 308 dbSNP
rs980879783 310 dbSNP
rs1438316472 318 dbSNP
rs1235154684 322 dbSNP
rs1205652939 327 dbSNP
rs926675351 333 dbSNP
rs150974756 336 dbSNP
rs927142558 337 dbSNP
rs1472528031 344 dbSNP
rs565598322 347 dbSNP
rs779381087 348 dbSNP
rs573136455 349 dbSNP
rs1057170853 350 dbSNP
rs375581461 355 dbSNP
rs1481115515 361 dbSNP
rs901708559 364 dbSNP
rs1426712347 366 dbSNP
rs1176420156 367 dbSNP
rs997292306 371 dbSNP
rs1358202865 373 dbSNP
rs1050158235 378 dbSNP
rs1464369010 380 dbSNP
rs746323885 386 dbSNP
rs759232124 388 dbSNP
rs544680379 390 dbSNP
rs1005900359 394 dbSNP
rs1286353934 400 dbSNP
rs1490735185 401 dbSNP
rs1292139550 402 dbSNP
rs1227863846 410 dbSNP
rs899374182 412 dbSNP
rs996447079 413 dbSNP
rs1029137595 414 dbSNP
rs1366823033 419 dbSNP
rs1281074970 422 dbSNP
rs1406602493 423 dbSNP
rs1346380267 424 dbSNP
rs564868379 425 dbSNP
rs1007961813 430 dbSNP
rs1300866460 431 dbSNP
rs1310599580 433 dbSNP
rs1451688645 434 dbSNP
rs1019398448 435 dbSNP
rs1347002161 437 dbSNP
rs111468935 442 dbSNP
rs988456649 443 dbSNP
rs1021728202 458 dbSNP
rs1423756544 460 dbSNP
rs1207104029 461 dbSNP
rs1179028991 471 dbSNP
rs968578137 472 dbSNP
rs530533040 477 dbSNP
rs970907929 479 dbSNP
rs1192419810 482 dbSNP
rs1484706710 483 dbSNP
rs1243275247 488 dbSNP
rs1215898563 499 dbSNP
rs927113223 500 dbSNP
rs1261250176 503 dbSNP
rs1225082788 508 dbSNP
rs980953480 508 dbSNP
rs1033819163 509 dbSNP
rs141002307 510 dbSNP
rs1271674624 515 dbSNP
rs1364370444 516 dbSNP
rs1289513512 518 dbSNP
rs1447480650 519 dbSNP
rs938558582 527 dbSNP
rs554075877 532 dbSNP
rs989523255 535 dbSNP
rs41281425 538 dbSNP
rs945360491 540 dbSNP
rs759328336 542 dbSNP
rs923163549 543 dbSNP
rs530229154 547 dbSNP
rs940772432 557 dbSNP
rs1421277646 558 dbSNP
rs1431050498 566 dbSNP
rs933217650 569 dbSNP
rs113785401 573 dbSNP
rs1461719276 577 dbSNP
rs888917103 579 dbSNP
rs1214202536 580 dbSNP
rs1309483158 588 dbSNP
rs1296614209 589 dbSNP
rs941787288 600 dbSNP
rs1380613401 606 dbSNP
rs1338817575 611 dbSNP
rs1037854348 614 dbSNP
rs1400228721 623 dbSNP
rs764956055 627 dbSNP
rs899171858 631 dbSNP
rs1355887907 636 dbSNP
rs1170763778 637 dbSNP
rs1306171475 640 dbSNP
rs932208384 647 dbSNP
rs993551005 648 dbSNP
rs1050689441 652 dbSNP
rs890624862 654 dbSNP
rs528968622 665 dbSNP
rs1365784159 666 dbSNP
rs146466809 668 dbSNP
rs548636661 669 dbSNP
rs573885469 681 dbSNP
rs891521133 691 dbSNP
rs745330158 694 dbSNP
rs1221059432 695 dbSNP
rs1033848385 696 dbSNP
rs1341982543 701 dbSNP
rs1317177773 705 dbSNP
rs1246875174 707 dbSNP
rs1376803176 707 dbSNP
rs1010415942 718 dbSNP
rs1393477759 721 dbSNP
rs539292200 723 dbSNP
rs1294600802 724 dbSNP
rs1423547880 728 dbSNP
rs1640299 729 dbSNP
rs1164933605 739 dbSNP
rs1001406925 740 dbSNP
rs966760955 742 dbSNP
rs977178016 743 dbSNP
rs1420838610 744 dbSNP
rs1250890766 749 dbSNP
rs1198435473 750 dbSNP
rs569220276 754 dbSNP
rs1223274765 760 dbSNP
rs1353134811 761 dbSNP
rs922578821 765 dbSNP
rs375640946 766 dbSNP
rs534150077 768 dbSNP
rs1301006758 772 dbSNP
rs992634551 773 dbSNP
rs528105996 774 dbSNP
rs1304635414 777 dbSNP
rs962121780 782 dbSNP
rs139045316 783 dbSNP
rs1156310683 786 dbSNP
rs1455230749 799 dbSNP
rs920575272 802 dbSNP
rs932008719 803 dbSNP
rs941860928 815 dbSNP
rs1050657258 816 dbSNP
rs573924110 822 dbSNP
rs536462137 824 dbSNP
rs1405833327 828 dbSNP
rs897586645 831 dbSNP
rs796566662 835 dbSNP
rs1352032705 836 dbSNP
rs1348251635 855 dbSNP
rs1052587278 856 dbSNP
rs1046494614 859 dbSNP
rs1263108136 861 dbSNP
rs1222046216 862 dbSNP
rs1432974966 865 dbSNP
rs1321535274 872 dbSNP
rs757366781 875 dbSNP
rs1223676730 877 dbSNP
rs1284363967 877 dbSNP
rs1325504797 879 dbSNP
rs767736809 881 dbSNP
rs1364654485 887 dbSNP
rs1385538272 888 dbSNP
rs1336055645 890 dbSNP
rs2286928 891 dbSNP
rs142988487 892 dbSNP
rs1043239661 904 dbSNP
rs1431102224 911 dbSNP
rs545250486 912 dbSNP
rs1317563783 913 dbSNP
rs417309 914 dbSNP
rs1033977444 917 dbSNP
rs894005937 931 dbSNP
rs142317498 944 dbSNP
rs373635127 944 dbSNP
rs1288310997 945 dbSNP
rs780283579 947 dbSNP
rs720012 952 dbSNP
rs967211246 955 dbSNP
rs1463053277 959 dbSNP
rs1264081931 975 dbSNP
rs1195645355 981 dbSNP
rs998246848 985 dbSNP
rs1014598141 1000 dbSNP
rs544023681 1001 dbSNP
rs1326448624 1002 dbSNP
rs1029621404 1004 dbSNP
rs1464133377 1009 dbSNP
rs1408222900 1016 dbSNP
rs1337147567 1020 dbSNP
rs962210058 1026 dbSNP
rs779607595 1028 dbSNP
rs920710910 1032 dbSNP
rs1394580122 1033 dbSNP
rs1169825687 1038 dbSNP
rs953449390 1045 dbSNP
rs986046997 1046 dbSNP
rs910458194 1049 dbSNP
rs542768202 1050 dbSNP
rs529699930 1061 dbSNP
rs911909496 1063 dbSNP
rs944964315 1064 dbSNP
rs186503511 1065 dbSNP
rs5844405 1065 dbSNP
rs929048137 1068 dbSNP
rs746481024 1077 dbSNP
rs946911473 1078 dbSNP
rs1384873419 1080 dbSNP
rs1043883616 1081 dbSNP
rs1441422397 1087 dbSNP
rs1338919892 1089 dbSNP
rs866333280 1097 dbSNP
rs560281160 1098 dbSNP
rs1001256855 1101 dbSNP
rs1055357205 1114 dbSNP
rs1426665640 1121 dbSNP
rs1386383425 1122 dbSNP
rs1011129538 1128 dbSNP
rs1376084707 1129 dbSNP
rs1469078452 1130 dbSNP
rs895512602 1137 dbSNP
rs1183000078 1151 dbSNP
rs1014153655 1153 dbSNP
rs1015294659 1158 dbSNP
rs1267788555 1162 dbSNP
rs897649741 1164 dbSNP
rs1327847116 1165 dbSNP
rs73389791 1166 dbSNP
rs998718783 1169 dbSNP
rs147125869 1172 dbSNP
rs1027509292 1174 dbSNP
rs1410280236 1174 dbSNP
rs1345083697 1176 dbSNP
rs953415268 1179 dbSNP
rs745512406 1180 dbSNP
rs986243198 1181 dbSNP
rs138314476 1182 dbSNP
rs1235665748 1184 dbSNP
rs1158478012 1194 dbSNP
rs775134861 1195 dbSNP
rs966482656 1197 dbSNP
rs550755566 1204 dbSNP
rs919120981 1205 dbSNP
rs548564421 1206 dbSNP
rs981885314 1212 dbSNP
rs112947298 1213 dbSNP
rs1246724665 1214 dbSNP
rs1403162109 1216 dbSNP
rs979544873 1216 dbSNP
rs1214528636 1217 dbSNP
rs112046386 1224 dbSNP
rs937719929 1226 dbSNP
rs367769950 1229 dbSNP
rs534255622 1235 dbSNP
rs1322504834 1236 dbSNP
rs1054810504 1239 dbSNP
rs914879455 1241 dbSNP
rs946962233 1243 dbSNP
rs553218217 1244 dbSNP
rs937076768 1248 dbSNP
rs567428522 1250 dbSNP
rs1321754667 1251 dbSNP
rs720014 1252 dbSNP
rs1427561345 1254 dbSNP
rs1349416320 1255 dbSNP
rs1226029834 1256 dbSNP
rs1425515588 1256 dbSNP
rs1213055671 1257 dbSNP
rs1248354599 1257 dbSNP
rs1322938510 1257 dbSNP
rs1491055390 1257 dbSNP
rs375425509 1257 dbSNP
rs749085725 1257 dbSNP
rs764355979 1257 dbSNP
rs1276264875 1258 dbSNP
rs1345202070 1268 dbSNP
rs1364124282 1268 dbSNP
rs1452476210 1270 dbSNP
rs1218458135 1271 dbSNP
rs1404611290 1271 dbSNP
rs3081766 1271 dbSNP
rs55696486 1272 dbSNP
rs199928718 1274 dbSNP
rs1205832940 1275 dbSNP
rs1250981905 1276 dbSNP
rs1482147405 1277 dbSNP
rs1201604466 1285 dbSNP
rs1378461499 1286 dbSNP
rs1391406162 1294 dbSNP
rs934164583 1295 dbSNP
rs1443912370 1296 dbSNP
rs1241270669 1301 dbSNP
rs774302341 1302 dbSNP
rs562754152 1303 dbSNP
rs1250583107 1305 dbSNP
rs1051150079 1313 dbSNP
rs558811439 1329 dbSNP
rs1245423762 1335 dbSNP
rs1171015378 1341 dbSNP
rs56018441 1344 dbSNP
rs1006894186 1353 dbSNP
rs895480121 1359 dbSNP
rs1016891716 1362 dbSNP
rs3213720 1368 dbSNP
rs1430803062 1374 dbSNP
rs898490895 1377 dbSNP
rs1168663435 1380 dbSNP
rs1423493085 1382 dbSNP
rs1383276791 1384 dbSNP
rs117915683 1389 dbSNP
rs1424336363 1391 dbSNP
rs371294394 1392 dbSNP
rs1407457858 1393 dbSNP
rs764094838 1404 dbSNP
rs1331346392 1406 dbSNP
rs1175324056 1411 dbSNP
rs1481739210 1413 dbSNP
rs1036035465 1418 dbSNP
rs573351708 1420 dbSNP
rs950630736 1422 dbSNP
rs1357309641 1424 dbSNP
rs1272684363 1430 dbSNP
rs897696233 1434 dbSNP
rs981958808 1436 dbSNP
rs1034822993 1437 dbSNP
rs994769941 1438 dbSNP
rs1027476950 1444 dbSNP
rs1344130222 1449 dbSNP
rs149622945 1450 dbSNP
rs1007646450 1457 dbSNP
rs1308307397 1460 dbSNP
rs766558597 1461 dbSNP
rs914929955 1463 dbSNP
rs1164512780 1465 dbSNP
rs1339930864 1465 dbSNP
rs1458339102 1467 dbSNP
rs554096162 1467 dbSNP
rs946398527 1472 dbSNP
rs966164800 1473 dbSNP
rs1473479508 1478 dbSNP
rs750589027 1479 dbSNP
rs1451078441 1480 dbSNP
rs1020974809 1481 dbSNP
rs574210532 1484 dbSNP
rs1197114442 1492 dbSNP
rs1051212117 1495 dbSNP
rs576450399 1498 dbSNP
rs968674408 1499 dbSNP
rs1450498428 1503 dbSNP
rs1168282114 1504 dbSNP
rs756282143 1505 dbSNP
rs926771750 1506 dbSNP
rs1427050529 1509 dbSNP
rs938219032 1512 dbSNP
rs898519707 1514 dbSNP
rs560343149 1522 dbSNP
rs916950880 1523 dbSNP
rs1458780142 1529 dbSNP
rs949832409 1533 dbSNP
rs1036409856 1534 dbSNP
rs1003428638 1544 dbSNP
rs1321242334 1547 dbSNP
rs191006280 1550 dbSNP
rs1211056237 1557 dbSNP
rs1465758957 1562 dbSNP
rs930528400 1566 dbSNP
rs1202251307 1567 dbSNP
rs1320932274 1581 dbSNP
rs1435586280 1582 dbSNP
rs1233551671 1585 dbSNP
rs1296536954 1586 dbSNP
rs1049046717 1587 dbSNP
rs1437115679 1589 dbSNP
rs1365912376 1592 dbSNP
rs1246954038 1596 dbSNP
rs1468071996 1596 dbSNP
rs1404585631 1597 dbSNP
rs1173324392 1598 dbSNP
rs1190668559 1599 dbSNP
rs1200608368 1599 dbSNP
rs1243116871 1599 dbSNP
rs1338357670 1599 dbSNP
rs1444442136 1599 dbSNP
rs1461697892 1599 dbSNP
rs1491112900 1599 dbSNP
rs368025246 1599 dbSNP
rs377243251 1599 dbSNP
rs750271456 1599 dbSNP
rs757223831 1599 dbSNP
rs757366981 1599 dbSNP
rs1271842007 1600 dbSNP
rs1491275763 1600 dbSNP
rs1365794738 1601 dbSNP
rs75039119 1601 dbSNP
rs888946059 1602 dbSNP
rs1007368321 1603 dbSNP
rs1170535111 1604 dbSNP
rs990603318 1604 dbSNP
rs1022034950 1605 dbSNP
rs867573230 1605 dbSNP
rs201768284 1606 dbSNP
rs901903348 1606 dbSNP
rs1009666310 1607 dbSNP
rs753084153 1607 dbSNP
rs934245949 1608 dbSNP
rs987008909 1608 dbSNP
rs1021360051 1609 dbSNP
rs1238114010 1609 dbSNP
rs1310038910 1610 dbSNP
rs1364968857 1610 dbSNP
rs968042191 1610 dbSNP
rs1001068662 1611 dbSNP
rs1407559566 1612 dbSNP
rs1033926623 1613 dbSNP
rs200131880 1613 dbSNP
rs71717697 1613 dbSNP
rs1491207361 1614 dbSNP
rs959623521 1614 dbSNP
rs1491236752 1615 dbSNP
rs866678232 1615 dbSNP
rs1047066992 1616 dbSNP
rs1063286 1616 dbSNP
rs1326772237 1616 dbSNP
rs907164741 1617 dbSNP
rs1246622318 1618 dbSNP
rs1202543953 1619 dbSNP
rs918109968 1619 dbSNP
rs1446786738 1620 dbSNP
rs1188931993 1621 dbSNP
rs1368386582 1623 dbSNP
rs1456979978 1624 dbSNP
rs1160878960 1627 dbSNP
rs1160383815 1629 dbSNP
rs1472712949 1633 dbSNP
rs1390413832 1638 dbSNP
rs546223455 1643 dbSNP
rs971863554 1644 dbSNP
rs563208220 1649 dbSNP
rs1056387097 1652 dbSNP
rs1319434546 1654 dbSNP
rs918915438 1659 dbSNP
rs1323049744 1665 dbSNP
rs1276827696 1666 dbSNP
rs9618740 1667 dbSNP
rs930330314 1668 dbSNP
rs114225267 1669 dbSNP
rs910434780 1676 dbSNP
rs1339738492 1678 dbSNP
rs1469655587 1681 dbSNP
rs943287000 1681 dbSNP
rs1242746241 1686 dbSNP
rs1040583760 1689 dbSNP
rs1329905422 1690 dbSNP
rs1022526325 1692 dbSNP
rs1425192154 1697 dbSNP
rs3757 1701 dbSNP
rs1447576857 1709 dbSNP
rs185145783 1713 dbSNP
rs1484476064 1722 dbSNP
rs1042513389 1724 dbSNP
rs1254060427 1725 dbSNP
rs755429057 1728 dbSNP
rs1256072440 1734 dbSNP
rs1226329401 1735 dbSNP
rs1344909656 1743 dbSNP
rs113501572 1745 dbSNP
rs987040139 1747 dbSNP
rs911455727 1753 dbSNP
rs41281427 1755 dbSNP
rs959591415 1757 dbSNP
rs974280822 1758 dbSNP
rs1167378337 1760 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site CDS
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uugauauguuggagGAUGGAGu 5'
                        | ||||| 
Target 5' --------------CCACCTCc 3'
 		1 - 8
Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KIRP -0.334 0.03 -0.333 0.03 32 Click to see details
PRAD 0.227 0.06 0.186 0.1 50 Click to see details
KICH -0.252 0.11 -0.278 0.09 25 Click to see details
UCEC 0.279 0.12 0.353 0.07 19 Click to see details
LUSC 0.168 0.16 0.157 0.17 38 Click to see details
BRCA -0.104 0.17 -0.101 0.18 84 Click to see details
KIRC 0.098 0.21 0.127 0.15 68 Click to see details
ESCA 0.24 0.24 0.127 0.35 11 Click to see details
THCA -0.072 0.29 0.000 0.5 59 Click to see details
CHOL -0.191 0.31 -0.117 0.38 9 Click to see details
BLCA -0.122 0.31 -0.040 0.44 18 Click to see details
PAAD -0.256 0.37 -0.200 0.4 4 Click to see details
HNSC -0.049 0.38 -0.113 0.24 42 Click to see details
COAD 0.127 0.38 0.214 0.31 8 Click to see details
STAD -0.052 0.39 -0.051 0.39 32 Click to see details
LIHC 0.038 0.4 0.031 0.42 49 Click to see details
CESC 0.278 0.41 0.500 0.33 3 Click to see details
PCPG -0.084 0.47 -0.500 0.33 3 Click to see details
LUAD 0.001 0.5 -0.119 0.36 12 Click to see details
LUAD 0.001 0.5 -0.119 0.36 12 Click to see details
LUAD 0.001 0.5 -0.119 0.36 12 Click to see details
581 hsa-let-7e-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT002081 HMGA2 high mobility group AT-hook 2 5 5
MIRT003932 EIF3J eukaryotic translation initiation factor 3 subunit J 2 1
MIRT004469 SMC1A structural maintenance of chromosomes 1A 4 7
MIRT005718 WNT1 Wnt family member 1 4 1
MIRT006122 CCND1 cyclin D1 5 4
MIRT006404 MPL MPL proto-oncogene, thrombopoietin receptor 1 1
MIRT032098 RABGAP1L RAB GTPase activating protein 1 like 1 1
MIRT032099 DAD1 defender against cell death 1 1 1
MIRT032100 MYCN MYCN proto-oncogene, bHLH transcription factor 4 2
MIRT051413 WDR67 TBC1 domain family member 31 1 1
MIRT051414 FAM219B family with sequence similarity 219 member B 1 1
MIRT051415 C11orf91 chromosome 11 open reading frame 91 1 1
MIRT051416 CENPP centromere protein P 1 1
MIRT051417 TMEM107 transmembrane protein 107 1 1
MIRT051418 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT051419 DAAM1 dishevelled associated activator of morphogenesis 1 1 1
MIRT051420 DGCR8 DGCR8, microprocessor complex subunit 1 1
MIRT051421 RAP1A RAP1A, member of RAS oncogene family 1 1
MIRT051422 RPA1 replication protein A1 1 1
MIRT051423 SKIV2L Ski2 like RNA helicase 1 1
MIRT051424 AGO1 argonaute 1, RISC catalytic component 4 2
MIRT051425 RPS27 ribosomal protein S27 1 1
MIRT051426 ARNT2 aryl hydrocarbon receptor nuclear translocator 2 1 1
MIRT051427 GPM6B glycoprotein M6B 1 1
MIRT051428 TTLL12 tubulin tyrosine ligase like 12 1 1
MIRT051429 HIST2H2BF histone cluster 2 H2B family member f 1 1
MIRT051430 CELF2 CUGBP Elav-like family member 2 1 1
MIRT051431 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT051432 VPS13D vacuolar protein sorting 13 homolog D 1 1
MIRT051433 RPL10 ribosomal protein L10 1 1
MIRT051434 SPCS2 signal peptidase complex subunit 2 1 1
MIRT051435 DCAF8 DDB1 and CUL4 associated factor 8 1 1
MIRT051436 CTC1 CST telomere replication complex component 1 1 1
MIRT051437 NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit 1 1
MIRT051438 PHF3 PHD finger protein 3 1 1
MIRT051439 TUBA1B tubulin alpha 1b 1 1
MIRT051440 SHANK1 SH3 and multiple ankyrin repeat domains 1 1 1
MIRT051441 SKA2 spindle and kinetochore associated complex subunit 2 1 1
MIRT051442 SPTBN1 spectrin beta, non-erythrocytic 1 1 1
MIRT051443 ND2 MTND2 1 1
MIRT051444 MED13L mediator complex subunit 13 like 1 1
MIRT051445 RCOR3 REST corepressor 3 1 1
MIRT051446 MACF1 microtubule-actin crosslinking factor 1 1 1
MIRT051447 RDX radixin 2 5
MIRT051448 PCBP2 poly(rC) binding protein 2 1 1
MIRT051449 UBAP2L ubiquitin associated protein 2 like 1 1
MIRT051450 CDCA3 cell division cycle associated 3 1 1
MIRT051451 CABLES1 Cdk5 and Abl enzyme substrate 1 1 1
MIRT051452 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 1
MIRT051453 C12orf49 chromosome 12 open reading frame 49 1 1
MIRT051454 TIMP3 TIMP metallopeptidase inhibitor 3 1 1
MIRT051455 WBSCR16 RCC1 like 1 1
MIRT051456 SLC2A11 solute carrier family 2 member 11 1 1
MIRT051457 NF1 neurofibromin 1 1 1
MIRT051458 LRRC8A leucine rich repeat containing 8 VRAC subunit A 1 1
MIRT051459 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT051460 DTNB dystrobrevin beta 1 1
MIRT051461 SCMH1 Scm polycomb group protein homolog 1 1 1
MIRT051462 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT051463 RHBDD2 rhomboid domain containing 2 1 1
MIRT051464 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT051465 NDST1 N-deacetylase and N-sulfotransferase 1 1 1
MIRT051466 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 5
MIRT051467 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT051468 BAHCC1 BAH domain and coiled-coil containing 1 1 1
MIRT051469 CARM1 coactivator associated arginine methyltransferase 1 1 1
MIRT051470 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT051471 ND3 NADH dehydrogenase, subunit 3 (complex I) 1 1
MIRT051472 PIGS phosphatidylinositol glycan anchor biosynthesis class S 1 1
MIRT051473 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT051474 RPN2 ribophorin II 1 1
MIRT051475 RPL12 ribosomal protein L12 1 1
MIRT051476 NME4 NME/NM23 nucleoside diphosphate kinase 4 1 1
MIRT051477 IVD isovaleryl-CoA dehydrogenase 1 1
MIRT051478 JAZF1 JAZF zinc finger 1 1 1
MIRT051479 ND4 NADH dehydrogenase, subunit 4 (complex I) 1 1
MIRT051480 VARS valyl-tRNA synthetase 1 1
MIRT051481 RNF26 ring finger protein 26 1 1
MIRT051482 LHFPL2 LHFPL tetraspan subfamily member 2 1 1
MIRT051483 ARCN1 archain 1 1 1
MIRT051484 COX1 cytochrome c oxidase subunit I 1 1
MIRT051485 SLC12A4 solute carrier family 12 member 4 1 1
MIRT051486 AEBP2 AE binding protein 2 1 1
MIRT051487 PET112 glutamyl-tRNA amidotransferase subunit B 1 1
MIRT051488 UROC1 urocanate hydratase 1 1 1
MIRT051489 IGF1R insulin like growth factor 1 receptor 5 10
MIRT051490 BSDC1 BSD domain containing 1 1 1
MIRT051491 PTK2 protein tyrosine kinase 2 1 1
MIRT051492 CDC5L cell division cycle 5 like 1 1
MIRT051493 EN2 engrailed homeobox 2 1 1
MIRT051494 SSB Sjogren syndrome antigen B 1 1
MIRT051495 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT051496 RRAGC Ras related GTP binding C 1 1
MIRT051497 ZNF236 zinc finger protein 236 1 1
MIRT051498 SEMA4B semaphorin 4B 1 1
MIRT051499 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT051500 XIAP X-linked inhibitor of apoptosis 1 1
MIRT051501 GTF2I general transcription factor IIi 1 1
MIRT051502 JMJD1C jumonji domain containing 1C 1 1
MIRT051503 OTUD5 OTU deubiquitinase 5 1 1
MIRT051504 NOLC1 nucleolar and coiled-body phosphoprotein 1 1 1
MIRT051505 PPIG peptidylprolyl isomerase G 1 1
MIRT051506 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT051507 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 1 1
MIRT051508 VAMP2 vesicle associated membrane protein 2 1 1
MIRT051509 LSR lipolysis stimulated lipoprotein receptor 1 1
MIRT051510 KIAA0355 KIAA0355 1 1
MIRT051511 RPSA ribosomal protein SA 1 1
MIRT051512 DCAF6 DDB1 and CUL4 associated factor 6 1 1
MIRT051513 UHRF1BP1 UHRF1 binding protein 1 1 1
MIRT051514 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 1 1
MIRT051515 PIGP phosphatidylinositol glycan anchor biosynthesis class P 1 1
MIRT051516 LMLN leishmanolysin like peptidase 1 1
MIRT051517 PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 1 1
MIRT051518 HIPK1 homeodomain interacting protein kinase 1 1 1
MIRT051519 SERF2 small EDRK-rich factor 2 1 1
MIRT051520 RBM4 RNA binding motif protein 4 1 1
MIRT051521 RBM14 RNA binding motif protein 14 1 1
MIRT051522 HMGB1 high mobility group box 1 1 1
MIRT051523 GMPS guanine monophosphate synthase 1 1
MIRT051524 DIAPH1 diaphanous related formin 1 1 1
MIRT051525 STAM signal transducing adaptor molecule 1 1
MIRT051526 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT051527 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 1 1
MIRT051528 MARCH5 membrane associated ring-CH-type finger 5 1 1
MIRT051529 SQLE squalene epoxidase 1 1
MIRT051530 TIMM50 translocase of inner mitochondrial membrane 50 1 1
MIRT051531 NDUFA3 NADH:ubiquinone oxidoreductase subunit A3 1 1
MIRT051532 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 1 1
MIRT051533 NRSN2 neurensin 2 1 1
MIRT051534 SALL1 spalt like transcription factor 1 1 1
MIRT051535 COX3 cytochrome c oxidase III 1 1
MIRT051536 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT051537 SUPT4H1 SPT4 homolog, DSIF elongation factor subunit 1 1
MIRT051538 PACS2 phosphofurin acidic cluster sorting protein 2 1 1
MIRT051539 MTMR14 myotubularin related protein 14 1 1
MIRT051540 LUZP1 leucine zipper protein 1 1 1
MIRT051541 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT051542 SUZ12 SUZ12 polycomb repressive complex 2 subunit 1 1
MIRT051543 PAPD4 poly(A) RNA polymerase D4, non-canonical 1 1
MIRT051544 QSOX1 quiescin sulfhydryl oxidase 1 1 1
MIRT051545 SPATA13 spermatogenesis associated 13 1 1
MIRT051546 DHX57 DExH-box helicase 57 1 1
MIRT051547 KATNB1 katanin regulatory subunit B1 1 1
MIRT051548 COL6A1 collagen type VI alpha 1 chain 1 1
MIRT051549 DHX15 DEAH-box helicase 15 1 1
MIRT051550 MTCH2 mitochondrial carrier 2 1 1
MIRT051551 KIAA0100 KIAA0100 1 1
MIRT051552 SUGP2 SURP and G-patch domain containing 2 1 1
MIRT051553 NCLN nicalin 1 1
MIRT051554 ATXN2L ataxin 2 like 1 1
MIRT051555 CHD9 chromodomain helicase DNA binding protein 9 1 1
MIRT051556 PES1 pescadillo ribosomal biogenesis factor 1 1 1
MIRT051557 NUP155 nucleoporin 155 2 7
MIRT051558 GNG5 G protein subunit gamma 5 2 3
MIRT051559 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT051560 MTFR1 mitochondrial fission regulator 1 1 1
MIRT051561 IRS2 insulin receptor substrate 2 2 1
MIRT051562 IRS4 insulin receptor substrate 4 1 1
MIRT051563 PPP1R10 protein phosphatase 1 regulatory subunit 10 1 1
MIRT051564 ZNF284 zinc finger protein 284 1 1
MIRT051565 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 1 1
MIRT051566 SCD stearoyl-CoA desaturase 1 1
MIRT051567 FDPS farnesyl diphosphate synthase 1 1
MIRT051568 KRBOX4 KRAB box domain containing 4 1 1
MIRT051569 BRI3 brain protein I3 1 1
MIRT051570 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT051571 PYCR1 pyrroline-5-carboxylate reductase 1 1 1
MIRT051572 SMAP2 small ArfGAP2 1 1
MIRT051573 WDFY3 WD repeat and FYVE domain containing 3 1 1
MIRT051574 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT051575 SRSF2 serine and arginine rich splicing factor 2 1 1
MIRT051576 PGD phosphogluconate dehydrogenase 1 1
MIRT051577 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT051578 ZNF652 zinc finger protein 652 1 1
MIRT051579 PSMA6 proteasome subunit alpha 6 1 1
MIRT051580 SLC38A2 solute carrier family 38 member 2 1 1
MIRT051581 LRRC41 leucine rich repeat containing 41 1 1
MIRT051582 RANBP2 RAN binding protein 2 1 1
MIRT051583 SVIL supervillin 1 1
MIRT051584 CCNG1 cyclin G1 1 1
MIRT051585 ZNF256 zinc finger protein 256 1 1
MIRT051586 COPG1 coatomer protein complex subunit gamma 1 1 1
MIRT051587 PDCD11 programmed cell death 11 1 1
MIRT051588 CNBP CCHC-type zinc finger nucleic acid binding protein 1 1
MIRT051589 USP37 ubiquitin specific peptidase 37 1 1
MIRT051590 UBE2V2 ubiquitin conjugating enzyme E2 V2 1 1
MIRT051591 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT051592 LMNA lamin A/C 1 1
MIRT051593 STAT3 signal transducer and activator of transcription 3 1 1
MIRT051594 TRPV1 transient receptor potential cation channel subfamily V member 1 1 1
MIRT051595 MATR3 matrin 3 1 1
MIRT051596 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 1
MIRT051597 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 1 1
MIRT051598 WDR48 WD repeat domain 48 1 1
MIRT051599 RBM8A RNA binding motif protein 8A 1 1
MIRT051600 SCYL1 SCY1 like pseudokinase 1 1 1
MIRT051601 C19orf48 chromosome 19 open reading frame 48 1 1
MIRT051602 FOXD4L6 forkhead box D4 like 6 1 1
MIRT051603 PIGN phosphatidylinositol glycan anchor biosynthesis class N 1 1
MIRT051604 SPCS3 signal peptidase complex subunit 3 1 1
MIRT051605 TNFAIP1 TNF alpha induced protein 1 1 1
MIRT051606 MS4A10 membrane spanning 4-domains A10 1 1
MIRT051607 MSMO1 methylsterol monooxygenase 1 1 1
MIRT051608 ARID1A AT-rich interaction domain 1A 1 1
MIRT051609 NCKIPSD NCK interacting protein with SH3 domain 2 5
MIRT051610 NCBP1 nuclear cap binding protein subunit 1 1 1
MIRT051611 COX16 COX16, cytochrome c oxidase assembly homolog 1 1
MIRT051612 NUDT8 nudix hydrolase 8 1 1
MIRT051613 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT051614 TXNRD1 thioredoxin reductase 1 1 1
MIRT051615 ELMSAN1 ELM2 and Myb/SANT domain containing 1 1 1
MIRT051616 CTSA cathepsin A 1 1
MIRT051617 PRRC2A proline rich coiled-coil 2A 1 1
MIRT051618 SPAG9 sperm associated antigen 9 1 1
MIRT051619 AGMAT agmatinase 1 1
MIRT051620 NCKAP5L NCK associated protein 5 like 1 1
MIRT051621 ZFP62 ZFP62 zinc finger protein 1 1
MIRT051622 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1 1
MIRT051623 POLR3D RNA polymerase III subunit D 2 3
MIRT051624 PRPF8 pre-mRNA processing factor 8 1 1
MIRT051625 ATP6 ATP synthase F0 subunit 6 1 1
MIRT051626 ZFAND5 zinc finger AN1-type containing 5 1 1
MIRT051627 BAZ1B bromodomain adjacent to zinc finger domain 1B 1 1
MIRT051628 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT051629 BMP2K BMP2 inducible kinase 1 1
MIRT051630 SPN sialophorin 1 1
MIRT051631 PA2G4 proliferation-associated 2G4 1 1
MIRT051632 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 1
MIRT051633 TUBB4B tubulin beta 4B class IVb 1 1
MIRT051634 TRRAP transformation/transcription domain associated protein 1 1
MIRT051635 SLCO4A1 solute carrier organic anion transporter family member 4A1 1 1
MIRT051636 CCRN4L nocturnin 1 1
MIRT051637 USE1 unconventional SNARE in the ER 1 1 1
MIRT051638 STARD7 StAR related lipid transfer domain containing 7 1 1
MIRT051639 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 3
MIRT051640 CLTC clathrin heavy chain 1 1
MIRT051641 TERF1 telomeric repeat binding factor 1 1 1
MIRT051642 PAX3 paired box 3 1 1
MIRT051643 CCDC97 coiled-coil domain containing 97 1 1
MIRT051644 HLA-C major histocompatibility complex, class I, C 1 1
MIRT051645 GTPBP8 GTP binding protein 8 (putative) 1 1
MIRT051646 VGLL4 vestigial like family member 4 1 1
MIRT051647 ANKRD40 ankyrin repeat domain 40 1 1
MIRT051648 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 1 1
MIRT051649 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT051650 DSP desmoplakin 1 1
MIRT051651 UBN2 ubinuclein 2 1 1
MIRT051652 ZNF805 zinc finger protein 805 1 1
MIRT051653 RBBP4 RB binding protein 4, chromatin remodeling factor 1 1
MIRT051654 OCLN occludin 1 1
MIRT051655 CBX5 chromobox 5 2 3
MIRT051656 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT051657 MKI67 marker of proliferation Ki-67 1 1
MIRT051658 SUB1 SUB1 homolog, transcriptional regulator 1 1
MIRT051659 RSL1D1 ribosomal L1 domain containing 1 1 1
MIRT051660 SEC23IP SEC23 interacting protein 1 1
MIRT051661 RNMT RNA guanine-7 methyltransferase 1 1
MIRT051662 SGSM3 small G protein signaling modulator 3 1 1
MIRT051663 ZFP3 ZFP3 zinc finger protein 1 1
MIRT051664 GLUL glutamate-ammonia ligase 1 1
MIRT051665 POLD1 DNA polymerase delta 1, catalytic subunit 1 1
MIRT051666 WDR4 WD repeat domain 4 1 1
MIRT051667 PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 1 1
MIRT051668 RAI2 retinoic acid induced 2 1 1
MIRT051669 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 1 1
MIRT051670 UTP15 UTP15, small subunit processome component 1 1
MIRT051671 THADA THADA, armadillo repeat containing 1 1
MIRT051672 ZNF451 zinc finger protein 451 1 1
MIRT051673 CREBBP CREB binding protein 1 1
MIRT051674 ZNF770 zinc finger protein 770 1 1
MIRT051675 CLDN4 claudin 4 1 1
MIRT051676 ZKSCAN7 zinc finger with KRAB and SCAN domains 7 1 1
MIRT051677 NICN1 nicolin 1 1 1
MIRT051678 RPLP2 ribosomal protein lateral stalk subunit P2 1 1
MIRT051679 DCBLD2 discoidin, CUB and LCCL domain containing 2 1 1
MIRT051680 IRGQ immunity related GTPase Q 1 1
MIRT051681 CA5B carbonic anhydrase 5B 1 1
MIRT051682 COX14 COX14, cytochrome c oxidase assembly factor 1 1
MIRT051683 PSD3 pleckstrin and Sec7 domain containing 3 1 1
MIRT051684 RPL27A ribosomal protein L27a 1 1
MIRT051685 CWC15 CWC15 spliceosome associated protein homolog 1 1
MIRT051686 NT5DC2 5'-nucleotidase domain containing 2 1 1
MIRT051687 OR7D2 olfactory receptor family 7 subfamily D member 2 1 1
MIRT051688 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 1 1
MIRT051689 NUDT15 nudix hydrolase 15 1 1
MIRT051690 CDH18 cadherin 18 1 1
MIRT051691 FAM160B1 family with sequence similarity 160 member B1 1 1
MIRT051692 DZIP1 DAZ interacting zinc finger protein 1 1 1
MIRT051693 TDRD7 tudor domain containing 7 1 1
MIRT051694 TCF4 transcription factor 4 1 1
MIRT051695 ENSA endosulfine alpha 1 1
MIRT051696 GTF3C1 general transcription factor IIIC subunit 1 1 1
MIRT051697 TNFRSF1A TNF receptor superfamily member 1A 1 1
MIRT051698 CCDC113 coiled-coil domain containing 113 1 1
MIRT051699 MYO9B myosin IXB 1 1
MIRT051700 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 1 1
MIRT051701 PRAMEF13 PRAME family member 13 1 1
MIRT051702 PMPCA peptidase, mitochondrial processing alpha subunit 2 5
MIRT051703 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT051704 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT051705 CCDC106 coiled-coil domain containing 106 1 1
MIRT051706 CYP2B6 cytochrome P450 family 2 subfamily B member 6 1 1
MIRT051707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 3
MIRT051708 PSME4 proteasome activator subunit 4 1 1
MIRT051709 SETD1A SET domain containing 1A 1 1
MIRT054561 MMP9 matrix metallopeptidase 9 3 1
MIRT054579 IGF1 insulin like growth factor 1 3 1
MIRT063195 ADIPOR2 adiponectin receptor 2 2 2
MIRT065687 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT067399 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT068154 TXLNA taxilin alpha 2 2
MIRT068528 NHLRC3 NHL repeat containing 3 2 6
MIRT068789 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT073006 ARID3B AT-rich interaction domain 3B 2 6
MIRT076223 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT077616 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT080398 ONECUT2 one cut homeobox 2 2 2
MIRT083300 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT084976 BACH1 BTB domain and CNC homolog 1 2 2
MIRT094160 PCGF3 polycomb group ring finger 3 2 6
MIRT094460 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT095766 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT100094 ABT1 activator of basal transcription 1 2 8
MIRT112242 MDM4 MDM4, p53 regulator 2 4
MIRT118586 STK4 serine/threonine kinase 4 2 2
MIRT120921 PDE12 phosphodiesterase 12 2 8
MIRT123317 CALU calumenin 2 2
MIRT152272 TNFSF9 TNF superfamily member 9 2 2
MIRT153847 NCOA3 nuclear receptor coactivator 3 2 2
MIRT168583 HMGA1 high mobility group AT-hook 1 2 4
MIRT180603 CRY2 cryptochrome circadian clock 2 2 2
MIRT187717 SUOX sulfite oxidase 2 2
MIRT191404 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT193101 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT215720 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT218815 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT240330 UBXN2B UBX domain protein 2B 2 2
MIRT243473 TRIM71 tripartite motif containing 71 2 2
MIRT244069 EDN1 endothelin 1 2 2
MIRT252330 SALL3 spalt like transcription factor 3 2 2
MIRT255314 CDV3 CDV3 homolog 2 2
MIRT259277 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT259479 TXLNG taxilin gamma 2 2
MIRT260707 CLDN12 claudin 12 2 6
MIRT264693 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT266212 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT266626 CHTOP chromatin target of PRMT1 2 2
MIRT268839 C1ORF21 chromosome 1 open reading frame 21 2 2
MIRT294446 ZNF264 zinc finger protein 264 2 2
MIRT297013 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT297443 SLC20A1 solute carrier family 20 member 1 2 4
MIRT300037 BZW1 basic leucine zipper and W2 domains 1 2 4
MIRT300893 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT303320 MXD1 MAX dimerization protein 1 2 2
MIRT309846 NAT8L N-acetyltransferase 8 like 2 2
MIRT322428 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT324731 ACER2 alkaline ceramidase 2 2 2
MIRT402057 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437395 LIN28A lin-28 homolog A 4 1
MIRT437396 AURKB aurora kinase B 4 1
MIRT437435 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 1
MIRT438632 TNFRSF10B TNF receptor superfamily member 10b 2 1
MIRT439135 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT442020 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT445658 ATP6V1G1 ATPase H+ transporting V1 subunit G1 2 6
MIRT447136 KIF27 kinesin family member 27 2 2
MIRT448259 ZNF774 zinc finger protein 774 2 2
MIRT449005 ANKRD46 ankyrin repeat domain 46 2 2
MIRT449953 FMNL3 formin like 3 2 2
MIRT451155 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451624 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451693 C1RL complement C1r subcomponent like 2 2
MIRT452092 NUCB2 nucleobindin 2 2 2
MIRT452431 QDPR quinoid dihydropteridine reductase 2 2
MIRT452943 DISC1 disrupted in schizophrenia 1 2 2
MIRT453401 RHD Rh blood group D antigen 2 6
MIRT454164 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT454280 FXN frataxin 2 2
MIRT454539 RABL2A RAB, member of RAS oncogene family like 2A 2 2
MIRT454854 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455676 GLO1 glyoxalase I 2 2
MIRT457248 RABL2B RAB, member of RAS oncogene family like 2B 2 2
MIRT457677 ZNF587 zinc finger protein 587 2 2
MIRT457887 THEM6 thioesterase superfamily member 6 2 4
MIRT458016 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458279 FUT10 fucosyltransferase 10 2 2
MIRT459736 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT460453 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460500 FAM105A family with sequence similarity 105 member A 2 6
MIRT460938 NOA1 nitric oxide associated 1 2 4
MIRT461092 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461169 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461364 COL8A1 collagen type VIII alpha 1 chain 2 2
MIRT462382 YAE1D1 Yae1 domain containing 1 2 2
MIRT462780 ZNF8 zinc finger protein 8 2 2
MIRT463420 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463662 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT464265 VCL vinculin 2 2
MIRT465122 TSC22D2 TSC22 domain family member 2 2 4
MIRT466184 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466722 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT469102 RNF144B ring finger protein 144B 2 2
MIRT469714 RAB40C RAB40C, member RAS oncogene family 2 2
MIRT470425 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT470679 POLR2D RNA polymerase II subunit D 2 4
MIRT470861 PLXND1 plexin D1 2 2
MIRT471271 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471957 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472672 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 2 2
MIRT472739 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473134 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT473234 SMCR7L mitochondrial elongation factor 1 1 4
MIRT473828 MAP2K7 mitogen-activated protein kinase kinase 7 2 2
MIRT473940 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT474022 LRRC20 leucine rich repeat containing 20 2 2
MIRT474502 KLHDC8B kelch domain containing 8B 2 2
MIRT474766 KIAA0930 KIAA0930 2 2
MIRT474905 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT475331 IFNLR1 interferon lambda receptor 1 2 2
MIRT475379 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT475733 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT476548 GABPB1 GA binding protein transcription factor beta subunit 1 2 4
MIRT476973 FAM83G family with sequence similarity 83 member G 2 4
MIRT477534 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 2 4
MIRT477682 EFHD2 EF-hand domain family member D2 2 2
MIRT481201 ATXN7L3B ataxin 7 like 3B 2 4
MIRT481241 ATXN7L3 ataxin 7 like 3 2 2
MIRT481363 ATG9A autophagy related 9A 2 2
MIRT481388 ATG12 autophagy related 12 2 2
MIRT481652 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT481851 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT482184 AHR aryl hydrocarbon receptor 2 2
MIRT482220 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT485296 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT486659 ZNF28 zinc finger protein 28 2 2
MIRT489413 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491867 ZBTB5 zinc finger and BTB domain containing 5 2 8
MIRT492216 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492626 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT493323 LIMD2 LIM domain containing 2 2 2
MIRT493901 FAM43A family with sequence similarity 43 member A 2 4
MIRT494263 CEP120 centrosomal protein 120 2 2
MIRT494687 ARID3A AT-rich interaction domain 3A 2 2
MIRT495968 TBC1D19 TBC1 domain family member 19 2 2
MIRT496111 SNX17 sorting nexin 17 2 2
MIRT497875 SLC12A7 solute carrier family 12 member 7 2 2
MIRT498122 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT499405 PLCG2 phospholipase C gamma 2 2 4
MIRT499493 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 2
MIRT499653 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 2 2
MIRT499942 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT499997 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT500819 THBS1 thrombospondin 1 2 3
MIRT500902 STRN striatin 2 4
MIRT501118 SLC5A6 solute carrier family 5 member 6 2 4
MIRT501173 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT501241 SEMA4C semaphorin 4C 2 6
MIRT501328 RNFT1 ring finger protein, transmembrane 1 2 2
MIRT501355 RNF44 ring finger protein 44 2 4
MIRT501387 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT501441 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT501759 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501943 MBD2 methyl-CpG binding domain protein 2 2 8
MIRT502106 KPNA5 karyopherin subunit alpha 5 2 8
MIRT502130 KMT2D lysine methyltransferase 2D 2 4
MIRT502784 CEP135 centrosomal protein 135 2 2
MIRT502845 CELF1 CUGBP Elav-like family member 1 2 2
MIRT504789 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT505017 ZNF644 zinc finger protein 644 2 2
MIRT506942 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT507252 FIGN fidgetin, microtubule severing factor 2 8
MIRT507694 COIL coilin 2 6
MIRT508401 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508665 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT508932 AK4 adenylate kinase 4 2 4
MIRT510395 ZNF566 zinc finger protein 566 2 6
MIRT510518 YOD1 YOD1 deubiquitinase 2 6
MIRT511386 IKZF3 IKAROS family zinc finger 3 2 4
MIRT512745 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT515954 C9orf156 tRNA methyltransferase O 2 2
MIRT516083 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT523619 FZD9 frizzled class receptor 9 2 4
MIRT523733 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523990 DVL3 dishevelled segment polarity protein 3 2 2
MIRT524113 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT525727 SOD2 superoxide dismutase 2 2 2
MIRT527763 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT529727 OPRL1 opioid related nociceptin receptor 1 2 2
MIRT533187 WASL Wiskott-Aldrich syndrome like 2 6
MIRT536378 LEFTY1 left-right determination factor 1 2 2
MIRT543785 RBM12B RNA binding motif protein 12B 2 4
MIRT543868 SLC16A9 solute carrier family 16 member 9 2 2
MIRT545387 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545890 ZNF200 zinc finger protein 200 2 4
MIRT546334 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547373 MSI2 musashi RNA binding protein 2 2 2
MIRT547579 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548264 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT548351 EPHA4 EPH receptor A4 2 2
MIRT548534 DUSP1 dual specificity phosphatase 1 2 2
MIRT548560 DNAL1 dynein axonemal light chain 1 2 2
MIRT548779 COLEC12 collectin subfamily member 12 2 2
MIRT548978 CCNT2 cyclin T2 2 2
MIRT549208 BEND4 BEN domain containing 4 2 4
MIRT549763 ZNF611 zinc finger protein 611 2 6
MIRT549799 KIAA0391 KIAA0391 2 2
MIRT549847 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 2
MIRT550898 ACTA1 actin, alpha 1, skeletal muscle 2 2
MIRT551283 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551318 GSG2 histone H3 associated protein kinase 2 6
MIRT551932 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552003 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT552410 ZNF460 zinc finger protein 460 2 4
MIRT553013 USP38 ubiquitin specific peptidase 38 2 2
MIRT555550 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT555711 PDZD8 PDZ domain containing 8 2 2
MIRT557372 HAND1 heart and neural crest derivatives expressed 1 2 2
MIRT557960 FAM222B family with sequence similarity 222 member B 2 2
MIRT559087 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559497 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT561772 PEG10 paternally expressed 10 2 2
MIRT564402 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT565443 SURF4 surfeit 4 2 2
MIRT566518 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT567715 E2F6 E2F transcription factor 6 2 2
MIRT568655 ABHD17C abhydrolase domain containing 17C 2 2
MIRT569498 THYN1 thymocyte nuclear protein 1 2 2
MIRT573820 TGOLN2 trans-golgi network protein 2 2 2
MIRT574363 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT574750 GOLGA4 golgin A4 2 2
MIRT574788 FAM104A family with sequence similarity 104 member A 2 2
MIRT576089 Poteg POTE ankyrin domain family, member G 2 2
MIRT576812 Thbs1 thrombospondin 1 2 3
MIRT616370 RWDD1 RWD domain containing 1 2 2
MIRT617851 FMO4 flavin containing monooxygenase 4 2 2
MIRT642394 ZNF556 zinc finger protein 556 2 2
MIRT680519 PRIM2 DNA primase subunit 2 2 2
MIRT680547 ZNF584 zinc finger protein 584 2 2
MIRT680800 ZNF578 zinc finger protein 578 2 2
MIRT680838 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT681141 INTS7 integrator complex subunit 7 2 2
MIRT681271 RFC2 replication factor C subunit 2 2 2
MIRT681323 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT681359 BRI3BP BRI3 binding protein 2 2
MIRT681506 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681536 ZNF738 zinc finger protein 738 2 2
MIRT681658 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT681738 RAB19 RAB19, member RAS oncogene family 2 4
MIRT681797 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681869 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT681941 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682102 ITGA3 integrin subunit alpha 3 2 4
MIRT682181 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682238 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682384 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682444 MTX3 metaxin 3 2 2
MIRT682604 CPA4 carboxypeptidase A4 2 2
MIRT682640 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT689327 FPR1 formyl peptide receptor 1 2 2
MIRT689730 ATXN2 ataxin 2 2 2
MIRT691036 ZNF799 zinc finger protein 799 2 2
MIRT691935 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT694884 ZNF417 zinc finger protein 417 2 2
MIRT695255 ZNF443 zinc finger protein 443 2 2
MIRT695413 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT700589 PRSS22 protease, serine 22 2 2
MIRT701428 NHLRC2 NHL repeat containing 2 2 2
MIRT702484 KIAA1328 KIAA1328 2 2
MIRT702715 IPO9 importin 9 2 2
MIRT704028 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT704418 CTPS1 CTP synthase 1 2 2
MIRT705750 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT712373 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT713520 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT731263 FASLG Fas ligand 3 1
MIRT732697 Ccr7 chemokine (C-C motif) receptor 7 2 0
MIRT732700 Snhg12 small nucleolar RNA host gene 12 2 0
MIRT734626 SYT7 synaptotagmin 7 1 0
MIRT755829 UBQLN4 ubiquilin 4 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
let-7e Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
let-7e Hydroxamic acid HDACi LAQ824 NULL NULL Microarray breast cancer cell line SKBr3 16452179 2006 down-regulated
let-7e Doxorubicin approved 31703 Microarray ovarian cancer 19237188 2009 up-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
let-7e Etoposide approved 36462 Microarray Normal human fibroblasts (AG01522) 19633716 2009 up-regulated
let-7e Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
let-7e 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 down-regulated
let-7e Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
let-7e Marine fungal metabolite 1386A NULL NULL Microarray MCF-7 breast cancer cells. 22159329 2012 down-regulated
let-7e Ginsenoside Rh2 NULL 119307 Microarray NSCLC cell line A549 23152132 2013 down-regulated
let-7e 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) NULL 16078949 Microarray hepatocytes 23107762 2013 up-regulated
let-7e Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Doxorubicin 31703 NSC123127 approved resistant High Ovarian Cancer cell line (OV19, TOV21G, TOV112D, FUOV1, C13, OV2008, A2780CP, A2780S, IGROV1, T8, OVCAR5, IMCC3, A2008, OVCAR3, SKOV3, IOSER)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Tongue Squamous Cell Carcinoma cell line (Tca8113)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant High Colon Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer tissue and cell line (A2780)
hsa-let-7e Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Vincristine 5978 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive High Lung Adenocarcinoma cell line (A549)
hsa-let-7e Imatinib 5291 NSC743414 approved resistant High Gastrointestinal Stromal Tumor tissue
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Adenocarcinoma cell line (OE19)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer tissue and cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780, HO8910, ES2, CAOV3, SKOV3)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive Low Colorectal Cancer cell line (HCT-8)
hsa-let-7e Daunorubicin 30323 NSC82151 approved resistant High Acute Promyelocytic Leukemia cell line (HL60)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7C)
hsa-let-7e Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (PC-9)
hsa-let-7e Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Regorafenib 11167602 NSC763932 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-let-7e Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-let-7e 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-let-7e Ethanol+Tamoxifen resistant cell line (LY2)
hsa-let-7e Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-let-7e Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-let-7e Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-let-7e Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-let-7e Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-let-7e Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-let-7e-5p Alvocidib 5287969 NSC649890 resistant
hsa-let-7e-5p Ethyl, methoxy, prodigisine 135829283 NSC742418 resistant
hsa-let-7e-5p Platinum 23939 resistant Low Ovarian Cancer tissue
hsa-let-7e-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (AsPC-1)
hsa-let-7e-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-let-7e-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-let-7e-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-let-7e-5p Sunitinib 5329102 NSC750690 approved sensitive tissue (clear cell renal cell carcinoma)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-let-7e-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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