miRTarBase - #MIRT051519


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pre-miRNA Information
pre-miRNA hsa-let-7e   
Genomic Coordinates chr19: 51692786 - 51692864
Synonyms MIRNLET7E, hsa-let-7e, let-7e, MIRLET7E
Description Homo sapiens let-7e stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7e-5p
Sequence 8| UGAGGUAGGAGGUUGUAUAGUU |29
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1189776118 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SERF2   
Synonyms 4F5REL, FAM2C, H4F5REL, HsT17089
Description small EDRK-rich factor 2
Transcript NM_001018108   
Expression
Putative miRNA Targets on SERF2
3'UTR of SERF2
(miRNA target sites are highlighted)		 
>SERF2|NM_001018108|3'UTR
   1 CTTTGTGGCTTCGTGTCCAACCCTCTTGCCCTTCGCCTGTGTGCCTGGAGCCAGTCCCACCACGCTCGCGTTTCCTCCTG
  81 TAGTGCTCACAGGTCCCAGCACCGATGGCATTCCCTTTGCCCTGAGTCTGCAGCGGGTCCCTTTTGTGCTTCCTTCCCCT
 161 CAGGTAGCCTCTCTCCCCCTGGGCCACTCCCGGGGGTGAGGGGGTTACCCCTTCCCAGTGTTTTTTATTCCTGTGGGGCT
 241 CACCCCAAAGTATTAAAAGTAGCTTTGTAATTCCTTGAGCGCCTGGTTTGACTGGGGACTTGGGGGGATGGGGTTGGAAG
 321 AATGACTGCCCTTTCCCACCAAAAAAGGGAGAACTCTTTAGATTCAGATTGTGGGTATGTAGACTTAATAAGTGAAACAT
 401 CACAGAAGAAGCCTTTATTATACAATGACAACCAAACAAGTACTCCGGATATGCAGTAGAGGAATCCTCTAAGAACCATA
 481 GAGACTTCTTTTCTGTGATTTTTGTTCCCCACCCTTGAACACCATCTCTAGGATGGAGTTGGCCTAAGAGTGAATGCTGC
 561 AAGATCTGTGTTTATGCCTCTTTTCCTCATTCTTCCTCAGTTTGTTCGTCTGCTTGAAAGTTGGCCAAAAAATCCTGCTG
 641 CTCACCGACTTCCCGTGGTCAGCTGCTGTCAAGCGTTCACTTTCTCTTCTGTCATTCCTCATGGAATGAGGGTGGTTTTG
 721 TCTTCCCGCTTCCCTTGACCTCAAAATCAGGATTAAAACCTGGGGTAGCCTCTGTGCTCCTTTCTTCTATGCCCTGGTTT
 801 GTTCTGTGGTTCTGGGCTTCTTATATCCGTGTGCCCAGGGCTGAACTCCTTATTTTCCTTTCTCCAAGGGCAGAGCCGAG
 881 TCTTCAGTCCCTGTTGGTCTTTCCCCACCCCCACTTCCAGCCCAAGAGCCAGGAAAGGGCTGGTGCCACACTGTCTGCTG
 961 GGATCAGCGGTGGTTCTTTGAGCTGCTGATTTGGGTGTTAGGCTCTTGAGCTGGGATGCAGATGTAACAGTAGCTCCAGT
1041 GAGTCAGACACTCTGCCCAGCACATTAGACTGTGTTTGACCACTTCTTCCAGTTCATAGTATTGACTTCAGCCCAAACGG
1121 AGATAACTCCCTGTGTGTCCTTGAGGTATTGAGCTGGGCTGGACAGCTCCCCTTGAGCCAACTCTAGGAGTACAATGTCA
1201 GGGGAACCCCAGTTTGTGAAAAGGACTTAGACTGGAGGATATTTGTTATCTGGGGATATGATGCGGTGGCGGCGGCGCCT
1281 CAAGATAAGGGGCTGGGGTTTCTGGGTGGGGGGCCAACAGAGTGGTGCCAGTAACAGCCCCAGATAGAGGAGTACGCAGG
1361 CCCAGCATGAGGCAACCTTGACCCAGAAGGTGGCCCAGCTACCCTTGATGAAGGTCTTTTCCAGTTCTGCTCCCTCATAG
1441 CTGTGTAACCAAAGGCTCTGGTTAGAGAATATGAAGGGCCTTAGCTTTTAGACCTGTTCTACCTCCTCACCAAATATAAT
1521 GGCAGACCCATGTGTGTCTGGAATGGCCTTGAATTGCTCTTTCCTTAAAATAGCTAGCTCTTCAGGAGAGTATCTAAGGC
1601 CCACTCCATCTTACCTGAACCAGTTGGTAAGGGTAACCATGACATAGAGTGAGGCAAGGAAGAAGACGAAGTGGAAGGCA
1681 GAATAGTTGTAGGAAAGATGCTGGACTTGGACTGGAGGAGCTGGAGGGGTTTCTTGGTCAGCTGGCCTCGCAGCCCCACC
1761 CCTTTGCCCTGGAGAGAGGAAATGGCTGCTGGGAGCAGAGCTGCTGAAACACCTCTTCCCCTCTCCCCCAACTACCTTTG
1841 TTAAGGCTCTTGAGGGTTCTTATGGCACTCCACAGAGATCTACCACTTCTTATGGTTCCTCACTTGGCACTCACCTTTGT
1921 CTGCCTCCACTGTTTCAGGGCAGCAGAAACACAGTGAGGGCTTCTGCAAAACAGAACGCAGGTTTTGGAATGGTCTTAAA
2001 AGATGTGAGGGTGTTAATCTAGGAAACTTCCCCCGTGAAAAGATTGGTCTAGTATTAAAAAGTGGAGGCACACCTGGGTT
2081 CAAATTCTAGCTCCAGCATATAAGTGGCTGTGCAGACTTTGGTAAGATGTTTAATCTTTTGTGCCTCGATTTCTCCATTT
2161 GTAAAATGGAGCAAATACCTACCTCACAGGGTTGTTGTGAGGGTTAAATTAAATGAGATTATGTAAAAGTATCTAGCACA
2241 GTTGCCTAGCACATTGTGGGTACTCAATAAAAGGTAACAGCAGCTATAATCTGAGCATTCTGGGTAGAGGTTGGTAAAAA
2321 AAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuGAUAUGUUGG--AGGAUGGAGu 5'
            || |  :|||  |:||||||| 
Target 5' agCTTTTAGACCTGTTCTACCTCc 3'
 1483 - 1506 158.00 -17.40
2 
miRNA  3' uugauaUGUUGGAGGAUGGAGu 5'
                :||| : |||||||| 
Target 5' aatggaGCAAATACCTACCTCa 3'
 2165 - 2186 156.00 -17.50
3 
miRNA  3' uuGAUAUGU---UGGA---GGAUGGAGu 5'
            ||  :||   ||||   :||:|||| 
Target 5' caCTTGGCACTCACCTTTGTCTGCCTCc 3'
 1901 - 1928 136.00 -15.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM2188753 3 COSMIC
COSM470696 6 COSMIC
COSM1147528 13 COSMIC
COSM8313324 14 COSMIC
COSM6001509 16 COSMIC
COSM2188754 34 COSMIC
COSM2188757 64 COSMIC
COSM2188758 65 COSMIC
COSM9546706 69 COSMIC
COSM2188759 70 COSMIC
COSM7449033 75 COSMIC
COSM2188760 76 COSMIC
COSM8573428 88 COSMIC
COSM6440895 136 COSMIC
COSM9174648 136 COSMIC
COSM2188763 140 COSMIC
COSM7622343 160 COSMIC
COSM4847508 162 COSMIC
COSM7641007 162 COSMIC
COSM2188764 177 COSMIC
COSM2188765 179 COSMIC
COSM6257356 184 COSMIC
COSM2188766 192 COSMIC
COSN5754583 231 COSMIC
COSN30718912 479 COSMIC
COSN19725277 512 COSMIC
COSN20078328 632 COSMIC
COSN30594482 633 COSMIC
COSN30580871 655 COSMIC
COSN31602124 1123 COSMIC
COSN30482549 1141 COSMIC
COSN30483074 1171 COSMIC
COSN30492908 1176 COSMIC
COSN30457342 1180 COSMIC
COSN26769702 1185 COSMIC
COSN30122030 1192 COSMIC
COSN31570000 1206 COSMIC
COSN30475462 1210 COSMIC
COSM1265272 1228 COSMIC
COSM9861360 1231 COSMIC
COSM1640249 1234 COSMIC
COSM7630965 1262 COSMIC
COSM2188767 1265 COSMIC
COSM9167742 1266 COSMIC
COSM4054881 1271 COSMIC
COSM1373086 1277 COSMIC
COSM2188768 1278 COSMIC
COSM8175278 1283 COSMIC
COSM7389336 1288 COSMIC
COSM5504105 1307 COSMIC
COSM6385682 1314 COSMIC
COSM263584 1324 COSMIC
COSM9343507 1328 COSMIC
COSM7389333 1336 COSMIC
COSM6445991 1338 COSMIC
COSM8123748 1341 COSMIC
COSM235330 1342 COSMIC
COSM7639970 1356 COSMIC
COSM4724989 1357 COSMIC
COSM8186094 1366 COSMIC
COSM4054883 1377 COSMIC
COSM9325627 1396 COSMIC
COSM3727649 1403 COSMIC
COSM372160 1405 COSMIC
COSM8702323 1405 COSMIC
COSM5633859 1411 COSMIC
COSM6257357 1411 COSMIC
COSM5441587 1414 COSMIC
COSM3361412 1422 COSMIC
COSM8325816 1425 COSMIC
COSM8086321 1435 COSMIC
COSN32063353 1520 COSMIC
COSM6286730 1618 COSMIC
COSM8149657 1627 COSMIC
COSM3700961 1640 COSMIC
COSM3501522 1660 COSMIC
COSM1678421 1668 COSMIC
COSM3816158 1669 COSMIC
COSM6270133 1678 COSMIC
COSM1373087 1708 COSMIC
COSM6390795 1716 COSMIC
COSM5948818 1721 COSMIC
COSM4724991 1725 COSMIC
COSM6343371 1730 COSMIC
COSM8445369 1738 COSMIC
COSM1741708 1750 COSMIC
COSM8899185 1751 COSMIC
COSM5920880 1755 COSMIC
COSM555198 1768 COSMIC
COSN4891630 1878 COSMIC
COSM3501524 1929 COSMIC
COSM8092479 1940 COSMIC
COSN28778097 1975 COSMIC
COSN510606 2004 COSMIC
COSN20933053 2304 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs769358781 6 dbSNP
rs772869968 11 dbSNP
rs1180065743 12 dbSNP
rs776224437 13 dbSNP
rs201274196 14 dbSNP
rs770359655 15 dbSNP
rs773845378 21 dbSNP
rs760093532 22 dbSNP
rs1196408347 30 dbSNP
rs768037613 31 dbSNP
rs753035270 32 dbSNP
rs753510458 35 dbSNP
rs1319195306 36 dbSNP
rs764238650 37 dbSNP
rs575152814 39 dbSNP
rs369902877 41 dbSNP
rs761280384 42 dbSNP
rs765474877 43 dbSNP
rs1274600415 44 dbSNP
rs11555372 45 dbSNP
rs750512118 46 dbSNP
rs1043887061 47 dbSNP
rs112115773 48 dbSNP
rs754908367 49 dbSNP
rs747914951 51 dbSNP
rs755878719 52 dbSNP
rs1273452730 53 dbSNP
rs749008549 54 dbSNP
rs764915359 56 dbSNP
rs770557996 58 dbSNP
rs1415942574 60 dbSNP
rs773900330 61 dbSNP
rs11555370 62 dbSNP
rs745342456 63 dbSNP
rs772478588 64 dbSNP
rs1802422 66 dbSNP
rs776005780 68 dbSNP
rs760950472 69 dbSNP
rs1049531 71 dbSNP
rs771499128 76 dbSNP
rs764583848 78 dbSNP
rs1370065842 80 dbSNP
rs762171807 81 dbSNP
rs765520151 82 dbSNP
rs1334863146 83 dbSNP
rs543848193 85 dbSNP
rs758458926 97 dbSNP
rs11555369 99 dbSNP
rs1218894823 104 dbSNP
rs757746110 105 dbSNP
rs1170663526 107 dbSNP
rs1477566693 109 dbSNP
rs1183851582 110 dbSNP
rs11555376 114 dbSNP
rs560839312 116 dbSNP
rs756003408 121 dbSNP
rs777603295 122 dbSNP
rs749061524 123 dbSNP
rs1444705189 124 dbSNP
rs756934168 127 dbSNP
rs778487274 129 dbSNP
rs745381980 131 dbSNP
rs1452117296 132 dbSNP
rs771542150 135 dbSNP
rs1350039690 136 dbSNP
rs1284857159 139 dbSNP
rs747606015 142 dbSNP
rs1041792142 149 dbSNP
rs750114075 149 dbSNP
rs769017432 151 dbSNP
rs1360553639 154 dbSNP
rs777171460 157 dbSNP
rs762233187 158 dbSNP
rs1352105881 160 dbSNP
rs1437640598 163 dbSNP
rs1274561410 165 dbSNP
rs1369090128 168 dbSNP
rs574350732 169 dbSNP
rs773514291 174 dbSNP
rs766549249 175 dbSNP
rs540137813 177 dbSNP
rs1034061455 179 dbSNP
rs758259097 180 dbSNP
rs1313824402 184 dbSNP
rs760717391 185 dbSNP
rs560265406 186 dbSNP
rs532242547 187 dbSNP
rs1245876959 189 dbSNP
rs753655469 190 dbSNP
rs756987277 192 dbSNP
rs778540129 193 dbSNP
rs1180180373 194 dbSNP
rs1270437288 197 dbSNP
rs1207142570 199 dbSNP
rs1012412136 200 dbSNP
rs1380522081 200 dbSNP
rs1438598496 202 dbSNP
rs1156238541 204 dbSNP
rs551831965 205 dbSNP
rs1406420138 211 dbSNP
rs1225796424 213 dbSNP
rs981889401 215 dbSNP
rs1290842766 217 dbSNP
rs565283773 218 dbSNP
rs750154803 219 dbSNP
rs766290998 221 dbSNP
rs1376425129 222 dbSNP
rs757971426 226 dbSNP
rs1025249440 227 dbSNP
rs538292919 235 dbSNP
rs928643399 237 dbSNP
rs937562616 239 dbSNP
rs963310915 244 dbSNP
rs1432623118 253 dbSNP
rs1344293635 260 dbSNP
rs1164997656 268 dbSNP
rs3180684 272 dbSNP
rs3180486 273 dbSNP
rs3180687 274 dbSNP
rs1406701049 282 dbSNP
rs1411027628 286 dbSNP
rs973500313 287 dbSNP
rs138943135 288 dbSNP
rs1250440485 293 dbSNP
rs758876324 303 dbSNP
rs1247548055 304 dbSNP
rs1224085519 305 dbSNP
rs148991630 307 dbSNP
rs987690183 308 dbSNP
rs1229229485 311 dbSNP
rs776952164 325 dbSNP
rs1432683817 329 dbSNP
rs1467064632 330 dbSNP
rs570598340 331 dbSNP
rs1192979016 338 dbSNP
rs945965170 343 dbSNP
rs1252450325 346 dbSNP
rs1347688521 347 dbSNP
rs577848609 347 dbSNP
rs776874059 350 dbSNP
rs1429808386 355 dbSNP
rs1051164919 357 dbSNP
rs890808292 358 dbSNP
rs1006787693 360 dbSNP
rs1371563215 367 dbSNP
rs1018226861 368 dbSNP
rs545173079 370 dbSNP
rs935650238 378 dbSNP
rs898318076 381 dbSNP
rs894216681 386 dbSNP
rs567669891 389 dbSNP
rs1025725481 391 dbSNP
rs1460333148 393 dbSNP
rs1325892656 395 dbSNP
rs190348367 410 dbSNP
rs981556860 418 dbSNP
rs906668173 426 dbSNP
rs1005550886 430 dbSNP
rs16964249 436 dbSNP
rs958719480 440 dbSNP
rs1365117569 444 dbSNP
rs994786181 447 dbSNP
rs1325508933 448 dbSNP
rs1029056184 449 dbSNP
rs1305587962 453 dbSNP
rs182940932 456 dbSNP
rs1294873296 460 dbSNP
rs987541280 461 dbSNP
rs1360184020 465 dbSNP
rs914855928 467 dbSNP
rs1178767125 470 dbSNP
rs1431782277 470 dbSNP
rs1428908502 472 dbSNP
rs1183201291 473 dbSNP
rs143742358 477 dbSNP
rs558614753 480 dbSNP
rs967197581 480 dbSNP
rs977781442 481 dbSNP
rs925850999 485 dbSNP
rs1268711157 489 dbSNP
rs935681113 494 dbSNP
rs568898114 505 dbSNP
rs774189198 506 dbSNP
rs759394273 509 dbSNP
rs537556777 511 dbSNP
rs1285914747 518 dbSNP
rs75197410 523 dbSNP
rs1428118853 525 dbSNP
rs1380592634 526 dbSNP
rs1305078985 527 dbSNP
rs1464949453 530 dbSNP
rs1405839084 535 dbSNP
rs1188590570 538 dbSNP
rs1045446588 543 dbSNP
rs148013244 545 dbSNP
rs1410030945 546 dbSNP
rs906735508 556 dbSNP
rs1474437942 564 dbSNP
rs1005044930 568 dbSNP
rs574116395 572 dbSNP
rs1262293031 573 dbSNP
rs1050849806 576 dbSNP
rs1209047681 577 dbSNP
rs1330851619 579 dbSNP
rs1390057729 580 dbSNP
rs912212933 581 dbSNP
rs1237754273 589 dbSNP
rs1321829310 596 dbSNP
rs1454845410 598 dbSNP
rs1394820199 599 dbSNP
rs899407933 603 dbSNP
rs1286583590 609 dbSNP
rs1321726257 622 dbSNP
rs540101461 624 dbSNP
rs1028961373 627 dbSNP
rs1386785494 627 dbSNP
rs1458564536 636 dbSNP
rs1314394740 637 dbSNP
rs953369983 638 dbSNP
rs553810192 644 dbSNP
rs1442706521 646 dbSNP
rs898446457 647 dbSNP
rs1288867594 648 dbSNP
rs1259353141 655 dbSNP
rs1204209803 658 dbSNP
rs995439723 665 dbSNP
rs1047302454 668 dbSNP
rs886959920 673 dbSNP
rs1243137798 675 dbSNP
rs1003348928 676 dbSNP
rs1035761630 681 dbSNP
rs1298958258 682 dbSNP
rs752063312 682 dbSNP
rs186907683 683 dbSNP
rs1485617306 687 dbSNP
rs1211795557 693 dbSNP
rs958688181 699 dbSNP
rs774883735 702 dbSNP
rs760301302 706 dbSNP
rs763675430 713 dbSNP
rs977268516 719 dbSNP
rs11549787 729 dbSNP
rs1032951372 732 dbSNP
rs753604354 733 dbSNP
rs1187704426 736 dbSNP
rs1169178523 740 dbSNP
rs191591027 743 dbSNP
rs924749504 748 dbSNP
rs954924708 759 dbSNP
rs761554660 765 dbSNP
rs1157645746 767 dbSNP
rs1362698989 770 dbSNP
rs562712845 772 dbSNP
rs912347865 778 dbSNP
rs1490033860 779 dbSNP
rs1207943332 780 dbSNP
rs942342104 780 dbSNP
rs1373273491 781 dbSNP
rs1269982850 784 dbSNP
rs1039348496 785 dbSNP
rs908275482 792 dbSNP
rs370469096 793 dbSNP
rs1404527984 797 dbSNP
rs765527439 802 dbSNP
rs931195241 803 dbSNP
rs1046995381 805 dbSNP
rs886925975 809 dbSNP
rs1309866312 810 dbSNP
rs549276999 813 dbSNP
rs1002691442 816 dbSNP
rs1394248308 817 dbSNP
rs1167175339 818 dbSNP
rs1316343814 821 dbSNP
rs1379045492 823 dbSNP
rs183408587 825 dbSNP
rs1057137928 829 dbSNP
rs1251920777 833 dbSNP
rs1183629169 840 dbSNP
rs940880610 842 dbSNP
rs1272904763 843 dbSNP
rs1345960529 844 dbSNP
rs1210482109 846 dbSNP
rs1036505383 847 dbSNP
rs1041298276 848 dbSNP
rs894523148 851 dbSNP
rs1481860226 852 dbSNP
rs1223149148 867 dbSNP
rs930902950 870 dbSNP
rs560457521 878 dbSNP
rs1012960891 879 dbSNP
rs889153957 881 dbSNP
rs187582859 886 dbSNP
rs561234310 890 dbSNP
rs1021549555 891 dbSNP
rs968764659 900 dbSNP
rs1468135273 902 dbSNP
rs750739557 904 dbSNP
rs1188882925 908 dbSNP
rs999494245 909 dbSNP
rs1433682977 912 dbSNP
rs1168911826 913 dbSNP
rs1031951393 918 dbSNP
rs998911506 921 dbSNP
rs1330151254 922 dbSNP
rs758848247 927 dbSNP
rs1270229930 928 dbSNP
rs1222180221 940 dbSNP
rs1460280256 946 dbSNP
rs987677598 948 dbSNP
rs910727618 954 dbSNP
rs1448681889 959 dbSNP
rs1368240595 964 dbSNP
rs567698201 968 dbSNP
rs192719626 970 dbSNP
rs1368949338 975 dbSNP
rs1233831364 978 dbSNP
rs1388982680 982 dbSNP
rs991444346 982 dbSNP
rs1398545438 983 dbSNP
rs1309566110 986 dbSNP
rs1163265510 995 dbSNP
rs1270111540 996 dbSNP
rs963757034 1004 dbSNP
rs567095907 1006 dbSNP
rs572392894 1023 dbSNP
rs1202906379 1025 dbSNP
rs1251197996 1026 dbSNP
rs1383916256 1035 dbSNP
rs185398419 1036 dbSNP
rs919562211 1041 dbSNP
rs1465607342 1042 dbSNP
rs971500728 1044 dbSNP
rs1469288790 1048 dbSNP
rs1446579362 1051 dbSNP
rs1196100648 1052 dbSNP
rs908182437 1056 dbSNP
rs981114582 1056 dbSNP
rs552453789 1059 dbSNP
rs931019896 1060 dbSNP
rs1250594003 1065 dbSNP
rs569110366 1068 dbSNP
rs973756953 1071 dbSNP
rs1365699430 1075 dbSNP
rs1453281093 1081 dbSNP
rs1186677519 1083 dbSNP
rs920763946 1083 dbSNP
rs1421243896 1084 dbSNP
rs1323713481 1088 dbSNP
rs537519374 1097 dbSNP
rs1383971530 1100 dbSNP
rs1163546338 1102 dbSNP
rs930808404 1103 dbSNP
rs549760199 1110 dbSNP
rs1185072402 1114 dbSNP
rs751982774 1116 dbSNP
rs938601226 1119 dbSNP
rs1056857418 1120 dbSNP
rs755103256 1124 dbSNP
rs1489870626 1125 dbSNP
rs567696997 1128 dbSNP
rs533590161 1130 dbSNP
rs1323871010 1131 dbSNP
rs1050669355 1132 dbSNP
rs781239638 1134 dbSNP
rs1297543081 1137 dbSNP
rs554027040 1140 dbSNP
rs1364382036 1141 dbSNP
rs1040393416 1146 dbSNP
rs1363196194 1147 dbSNP
rs577023776 1150 dbSNP
rs1430955406 1153 dbSNP
rs1213083326 1157 dbSNP
rs1356781275 1159 dbSNP
rs903149602 1162 dbSNP
rs1409726324 1163 dbSNP
rs948780561 1168 dbSNP
rs1201902025 1179 dbSNP
rs372775523 1182 dbSNP
rs746466410 1183 dbSNP
rs754998121 1185 dbSNP
rs769313998 1186 dbSNP
rs1043170181 1192 dbSNP
rs187951529 1197 dbSNP
rs1480953146 1198 dbSNP
rs1192453182 1200 dbSNP
rs1238652591 1204 dbSNP
rs1252981815 1205 dbSNP
rs112335120 1208 dbSNP
rs1163228985 1209 dbSNP
rs1416330459 1210 dbSNP
rs1306740859 1211 dbSNP
rs770220121 1212 dbSNP
rs773710636 1213 dbSNP
rs763295298 1220 dbSNP
rs1389853821 1221 dbSNP
rs771038548 1223 dbSNP
rs774531261 1227 dbSNP
rs1447351467 1229 dbSNP
rs576323903 1232 dbSNP
rs1012744412 1239 dbSNP
rs764346378 1244 dbSNP
rs143486742 1246 dbSNP
rs764032205 1250 dbSNP
rs753706823 1251 dbSNP
rs1258419521 1252 dbSNP
rs1338368612 1255 dbSNP
rs761732921 1256 dbSNP
rs1280257796 1257 dbSNP
rs1442559155 1260 dbSNP
rs1186591979 1262 dbSNP
rs777667165 1263 dbSNP
rs143602754 1265 dbSNP
rs574879721 1266 dbSNP
rs375681174 1267 dbSNP
rs369518718 1268 dbSNP
rs369732267 1268 dbSNP
rs192035160 1269 dbSNP
rs754483746 1271 dbSNP
rs145705656 1272 dbSNP
rs149013820 1274 dbSNP
rs368967498 1275 dbSNP
rs778250947 1277 dbSNP
rs1243529609 1278 dbSNP
rs143808872 1278 dbSNP
rs1401712805 1280 dbSNP
rs373214024 1282 dbSNP
rs757346933 1282 dbSNP
rs1278740268 1283 dbSNP
rs771216898 1285 dbSNP
rs1224961284 1289 dbSNP
rs1276310498 1290 dbSNP
rs371045123 1293 dbSNP
rs552855311 1294 dbSNP
rs755434251 1295 dbSNP
rs772205377 1298 dbSNP
rs375421621 1304 dbSNP
rs376787676 1306 dbSNP
rs548863288 1307 dbSNP
rs1261606291 1308 dbSNP
rs919669117 1309 dbSNP
rs1427182752 1310 dbSNP
rs773087720 1311 dbSNP
rs1405682150 1314 dbSNP
rs151106509 1317 dbSNP
rs1453957245 1318 dbSNP
rs1204292874 1319 dbSNP
rs766074141 1319 dbSNP
rs142556047 1322 dbSNP
rs1420349407 1323 dbSNP
rs1298804550 1325 dbSNP
rs908211842 1326 dbSNP
rs1384145473 1330 dbSNP
rs1380327816 1332 dbSNP
rs1303054153 1335 dbSNP
rs146664766 1336 dbSNP
rs1262400184 1338 dbSNP
rs752235354 1338 dbSNP
rs1418496290 1340 dbSNP
rs992720015 1346 dbSNP
rs1300783783 1347 dbSNP
rs756727241 1348 dbSNP
rs778103282 1349 dbSNP
rs1185244548 1350 dbSNP
rs1459788614 1351 dbSNP
rs370605763 1353 dbSNP
rs113812701 1354 dbSNP
rs779182068 1354 dbSNP
rs757496538 1356 dbSNP
rs531821428 1357 dbSNP
rs910686594 1358 dbSNP
rs1317741426 1359 dbSNP
rs746103485 1359 dbSNP
rs772256664 1360 dbSNP
rs1440457995 1363 dbSNP
rs1158407308 1365 dbSNP
rs374113255 1368 dbSNP
rs747047754 1369 dbSNP
rs1361111032 1374 dbSNP
rs769788389 1383 dbSNP
rs1391252551 1384 dbSNP
rs1298725982 1385 dbSNP
rs1288634711 1388 dbSNP
rs1439856617 1389 dbSNP
rs138021432 1390 dbSNP
rs368021438 1393 dbSNP
rs772352476 1395 dbSNP
rs774277001 1396 dbSNP
rs759313204 1401 dbSNP
rs745627444 1402 dbSNP
rs1247683766 1403 dbSNP
rs752286728 1406 dbSNP
rs1366154067 1408 dbSNP
rs143513498 1409 dbSNP
rs764665774 1415 dbSNP
rs754369141 1417 dbSNP
rs547879160 1420 dbSNP
rs1259205027 1424 dbSNP
rs567856203 1425 dbSNP
rs1248448851 1426 dbSNP
rs371410955 1430 dbSNP
rs934641539 1432 dbSNP
rs747101117 1433 dbSNP
rs1220925371 1436 dbSNP
rs1303004153 1439 dbSNP
rs1053093617 1441 dbSNP
rs768555344 1442 dbSNP
rs1460783232 1447 dbSNP
rs1162461364 1453 dbSNP
rs1402058639 1455 dbSNP
rs147161959 1456 dbSNP
rs1324951949 1461 dbSNP
rs749244156 1462 dbSNP
rs770881958 1465 dbSNP
rs1397265633 1466 dbSNP
rs1405732456 1468 dbSNP
rs1314136455 1473 dbSNP
rs1347490038 1474 dbSNP
rs774329869 1477 dbSNP
rs17580062 1478 dbSNP
rs1017894300 1479 dbSNP
rs1002792741 1480 dbSNP
rs1318904656 1486 dbSNP
rs1204153503 1488 dbSNP
rs115750613 1495 dbSNP
rs1168332631 1501 dbSNP
rs1463304788 1506 dbSNP
rs1349575199 1507 dbSNP
rs772521828 1511 dbSNP
rs560893956 1512 dbSNP
rs1208333364 1518 dbSNP
rs1270422531 1522 dbSNP
rs961060479 1532 dbSNP
rs995119718 1533 dbSNP
rs753033925 1535 dbSNP
rs1274292626 1536 dbSNP
rs1197965345 1544 dbSNP
rs1027149515 1552 dbSNP
rs1251058476 1556 dbSNP
rs952460023 1561 dbSNP
rs775546000 1563 dbSNP
rs982950512 1564 dbSNP
rs1268084367 1565 dbSNP
rs539322002 1568 dbSNP
rs1484317774 1571 dbSNP
rs775225510 1574 dbSNP
rs1191813550 1575 dbSNP
rs1258158682 1577 dbSNP
rs760370133 1578 dbSNP
rs78564930 1583 dbSNP
rs915863375 1584 dbSNP
rs1158880323 1585 dbSNP
rs753364925 1589 dbSNP
rs762263548 1590 dbSNP
rs775860074 1591 dbSNP
rs1381243363 1592 dbSNP
rs747463211 1598 dbSNP
rs765732235 1605 dbSNP
rs769182206 1606 dbSNP
rs1312883202 1611 dbSNP
rs777047886 1613 dbSNP
rs966608903 1618 dbSNP
rs976397453 1625 dbSNP
rs750804762 1626 dbSNP
rs1363142942 1637 dbSNP
rs576280150 1639 dbSNP
rs532961414 1642 dbSNP
rs150100062 1645 dbSNP
rs1283753706 1646 dbSNP
rs761385821 1647 dbSNP
rs1210921350 1648 dbSNP
rs1279632680 1650 dbSNP
rs1484716813 1651 dbSNP
rs1301908010 1659 dbSNP
rs924844763 1659 dbSNP
rs1265239891 1663 dbSNP
rs142695112 1665 dbSNP
rs1162962866 1668 dbSNP
rs751850244 1668 dbSNP
rs781181615 1669 dbSNP
rs1416952617 1670 dbSNP
rs147441322 1672 dbSNP
rs934734473 1673 dbSNP
rs914549493 1678 dbSNP
rs770807720 1683 dbSNP
rs376623976 1687 dbSNP
rs200741760 1688 dbSNP
rs1053631454 1690 dbSNP
rs1300665479 1698 dbSNP
rs757004016 1702 dbSNP
rs745672740 1710 dbSNP
rs772059515 1711 dbSNP
rs200290403 1712 dbSNP
rs768321884 1713 dbSNP
rs1241107279 1717 dbSNP
rs776032811 1719 dbSNP
rs761334957 1720 dbSNP
rs1242388784 1730 dbSNP
rs1288093253 1731 dbSNP
rs911878304 1734 dbSNP
rs944720059 1740 dbSNP
rs1447444143 1742 dbSNP
rs1214845281 1743 dbSNP
rs1240095124 1746 dbSNP
rs1222787810 1747 dbSNP
rs201646905 1748 dbSNP
rs1193921795 1750 dbSNP
rs376001419 1751 dbSNP
rs763450248 1752 dbSNP
rs766791350 1755 dbSNP
rs1409366742 1758 dbSNP
rs751932662 1763 dbSNP
rs755197980 1767 dbSNP
rs74494149 1768 dbSNP
rs1442091322 1769 dbSNP
rs772863927 1770 dbSNP
rs756161071 1771 dbSNP
rs762700601 1772 dbSNP
rs766237941 1772 dbSNP
rs768347596 1773 dbSNP
rs778999629 1778 dbSNP
rs1355666721 1783 dbSNP
rs1449095481 1784 dbSNP
rs745858511 1789 dbSNP
rs546163079 1790 dbSNP
rs1223197294 1791 dbSNP
rs1282031547 1795 dbSNP
rs369620901 1796 dbSNP
rs995502685 1797 dbSNP
rs780033413 1798 dbSNP
rs746775911 1802 dbSNP
rs1214083244 1805 dbSNP
rs775893138 1806 dbSNP
rs1003110455 1807 dbSNP
rs1466813345 1809 dbSNP
rs1180008895 1812 dbSNP
rs768213727 1813 dbSNP
rs369243797 1819 dbSNP
rs747612909 1821 dbSNP
rs897058178 1823 dbSNP
rs1203456323 1824 dbSNP
rs1286516389 1824 dbSNP
rs1348520952 1825 dbSNP
rs562892392 1826 dbSNP
rs886623121 1830 dbSNP
rs1003946517 1832 dbSNP
rs1384750483 1839 dbSNP
rs1312570298 1841 dbSNP
rs373346812 1845 dbSNP
rs1191905411 1848 dbSNP
rs1319785493 1855 dbSNP
rs149510309 1857 dbSNP
rs181235842 1864 dbSNP
rs767615817 1866 dbSNP
rs769363902 1870 dbSNP
rs1479787233 1873 dbSNP
rs763503353 1874 dbSNP
rs1426841335 1878 dbSNP
rs372346641 1879 dbSNP
rs764891161 1880 dbSNP
rs774611552 1881 dbSNP
rs1467333209 1883 dbSNP
rs759897948 1884 dbSNP
rs751424100 1886 dbSNP
rs767647154 1890 dbSNP
rs200128740 1894 dbSNP
rs1357227963 1895 dbSNP
rs1233681910 1896 dbSNP
rs756391238 1901 dbSNP
rs1332257967 1909 dbSNP
rs764317737 1910 dbSNP
rs1273259191 1911 dbSNP
rs1436776990 1913 dbSNP
rs754858046 1918 dbSNP
rs1178971193 1922 dbSNP
rs1227518303 1925 dbSNP
rs1260232789 1933 dbSNP
rs753936874 1936 dbSNP
rs1271600657 1937 dbSNP
rs1187707554 1940 dbSNP
rs1416208656 1945 dbSNP
rs767483405 1949 dbSNP
rs752634344 1953 dbSNP
rs758439676 1954 dbSNP
rs1408294030 1957 dbSNP
rs1336179804 1958 dbSNP
rs1441971710 1961 dbSNP
rs1339293392 1962 dbSNP
rs372519705 1963 dbSNP
rs199617532 1965 dbSNP
rs757303218 1973 dbSNP
rs1353399287 1974 dbSNP
rs754731664 1975 dbSNP
rs925785168 1978 dbSNP
rs956092153 1979 dbSNP
rs778859490 1983 dbSNP
rs780841671 1986 dbSNP
rs747895764 1991 dbSNP
rs1352205042 1992 dbSNP
rs1210847608 1994 dbSNP
rs1256020842 1997 dbSNP
rs966267118 1999 dbSNP
rs745469198 2003 dbSNP
rs1194276056 2005 dbSNP
rs868632203 2006 dbSNP
rs1372727406 2010 dbSNP
rs1031821762 2012 dbSNP
rs1220687779 2018 dbSNP
rs547487335 2020 dbSNP
rs1274782956 2029 dbSNP
rs1274979494 2031 dbSNP
rs990369286 2036 dbSNP
rs1283430206 2038 dbSNP
rs912016377 2045 dbSNP
rs185081856 2048 dbSNP
rs564958222 2053 dbSNP
rs1293495530 2056 dbSNP
rs1443503770 2059 dbSNP
rs1356657755 2075 dbSNP
rs921938930 2082 dbSNP
rs188997599 2084 dbSNP
rs766634461 2094 dbSNP
rs1447771584 2100 dbSNP
rs1430230342 2103 dbSNP
rs1178738001 2105 dbSNP
rs1195689896 2111 dbSNP
rs1479479949 2112 dbSNP
rs1266699945 2114 dbSNP
rs930884195 2127 dbSNP
rs1480878874 2140 dbSNP
rs1303948944 2142 dbSNP
rs550093590 2146 dbSNP
rs1234459353 2147 dbSNP
rs753762601 2148 dbSNP
rs754908195 2149 dbSNP
rs886594727 2152 dbSNP
rs1457077751 2157 dbSNP
rs1477707171 2158 dbSNP
rs938551117 2162 dbSNP
rs1005495380 2168 dbSNP
rs1036737038 2171 dbSNP
rs757852888 2176 dbSNP
rs1331537932 2184 dbSNP
rs1166202064 2190 dbSNP
rs1224921934 2191 dbSNP
rs1420694368 2194 dbSNP
rs1299925149 2199 dbSNP
rs1460381289 2204 dbSNP
rs1292402675 2214 dbSNP
rs1036843584 2218 dbSNP
rs1385131689 2223 dbSNP
rs570003199 2224 dbSNP
rs1446482514 2225 dbSNP
rs1315798112 2229 dbSNP
rs759225469 2230 dbSNP
rs1468375702 2240 dbSNP
rs1377143696 2243 dbSNP
rs895530593 2260 dbSNP
rs931237543 2261 dbSNP
rs1410038347 2268 dbSNP
rs1048296857 2270 dbSNP
rs1294995402 2275 dbSNP
rs535755596 2278 dbSNP
rs556494865 2283 dbSNP
rs1438882018 2292 dbSNP
rs1332565264 2293 dbSNP
rs1013966649 2294 dbSNP
rs1022557914 2296 dbSNP
rs970147516 2297 dbSNP
rs1244027935 2301 dbSNP
rs555552798 2304 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site 3'UTR
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuGA-UAUGUUGGAG-GAUGGAGu 5'
            || | ::|:|||| || || | 
Target 5' ccCTCAGGTAGCCTCTCTCCCCCt 3'
 		16 - 39
2 
miRNA  3' uugauauguuggAGGAUGGAGu 5'
                      | || |||: 
Target 5' -------ttttgTGCTTCCTTc 3'
 		1 - 15
Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
COAD -0.824 0.01 -0.857 0 8 Click to see details
BLCA 0.517 0.01 0.573 0.01 18 Click to see details
LIHC 0.292 0.02 0.230 0.06 49 Click to see details
THCA -0.264 0.02 -0.264 0.02 59 Click to see details
PRAD -0.26 0.03 -0.281 0.02 50 Click to see details
STAD -0.243 0.09 -0.207 0.13 32 Click to see details
BRCA 0.119 0.14 0.086 0.22 84 Click to see details
PAAD 0.698 0.15 0.800 0.1 4 Click to see details
ESCA -0.342 0.15 -0.355 0.14 11 Click to see details
UCEC -0.247 0.15 -0.244 0.16 19 Click to see details
PCPG -0.874 0.16 -1.000 0.5 3 Click to see details
LUAD 0.272 0.2 0.203 0.26 12 Click to see details
KIRC -0.076 0.27 -0.001 0.5 68 Click to see details
KIRP 0.102 0.29 0.220 0.11 32 Click to see details
KICH 0.094 0.33 0.074 0.36 25 Click to see details
CHOL 0.139 0.36 0.267 0.24 9 Click to see details
LUSC -0.052 0.38 -0.007 0.48 38 Click to see details
HNSC 0.026 0.44 -0.022 0.45 42 Click to see details
CESC 0.004 0.5 0.500 0.33 3 Click to see details
CESC 0.004 0.5 0.500 0.33 3 Click to see details
CESC 0.004 0.5 0.500 0.33 3 Click to see details
581 hsa-let-7e-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT002081 HMGA2 high mobility group AT-hook 2 5 5
MIRT003932 EIF3J eukaryotic translation initiation factor 3 subunit J 2 1
MIRT004469 SMC1A structural maintenance of chromosomes 1A 4 7
MIRT005718 WNT1 Wnt family member 1 4 1
MIRT006122 CCND1 cyclin D1 5 4
MIRT006404 MPL MPL proto-oncogene, thrombopoietin receptor 1 1
MIRT032098 RABGAP1L RAB GTPase activating protein 1 like 1 1
MIRT032099 DAD1 defender against cell death 1 1 1
MIRT032100 MYCN MYCN proto-oncogene, bHLH transcription factor 4 2
MIRT051413 WDR67 TBC1 domain family member 31 1 1
MIRT051414 FAM219B family with sequence similarity 219 member B 1 1
MIRT051415 C11orf91 chromosome 11 open reading frame 91 1 1
MIRT051416 CENPP centromere protein P 1 1
MIRT051417 TMEM107 transmembrane protein 107 1 1
MIRT051418 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT051419 DAAM1 dishevelled associated activator of morphogenesis 1 1 1
MIRT051420 DGCR8 DGCR8, microprocessor complex subunit 1 1
MIRT051421 RAP1A RAP1A, member of RAS oncogene family 1 1
MIRT051422 RPA1 replication protein A1 1 1
MIRT051423 SKIV2L Ski2 like RNA helicase 1 1
MIRT051424 AGO1 argonaute 1, RISC catalytic component 4 2
MIRT051425 RPS27 ribosomal protein S27 1 1
MIRT051426 ARNT2 aryl hydrocarbon receptor nuclear translocator 2 1 1
MIRT051427 GPM6B glycoprotein M6B 1 1
MIRT051428 TTLL12 tubulin tyrosine ligase like 12 1 1
MIRT051429 HIST2H2BF histone cluster 2 H2B family member f 1 1
MIRT051430 CELF2 CUGBP Elav-like family member 2 1 1
MIRT051431 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT051432 VPS13D vacuolar protein sorting 13 homolog D 1 1
MIRT051433 RPL10 ribosomal protein L10 1 1
MIRT051434 SPCS2 signal peptidase complex subunit 2 1 1
MIRT051435 DCAF8 DDB1 and CUL4 associated factor 8 1 1
MIRT051436 CTC1 CST telomere replication complex component 1 1 1
MIRT051437 NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit 1 1
MIRT051438 PHF3 PHD finger protein 3 1 1
MIRT051439 TUBA1B tubulin alpha 1b 1 1
MIRT051440 SHANK1 SH3 and multiple ankyrin repeat domains 1 1 1
MIRT051441 SKA2 spindle and kinetochore associated complex subunit 2 1 1
MIRT051442 SPTBN1 spectrin beta, non-erythrocytic 1 1 1
MIRT051443 ND2 MTND2 1 1
MIRT051444 MED13L mediator complex subunit 13 like 1 1
MIRT051445 RCOR3 REST corepressor 3 1 1
MIRT051446 MACF1 microtubule-actin crosslinking factor 1 1 1
MIRT051447 RDX radixin 2 5
MIRT051448 PCBP2 poly(rC) binding protein 2 1 1
MIRT051449 UBAP2L ubiquitin associated protein 2 like 1 1
MIRT051450 CDCA3 cell division cycle associated 3 1 1
MIRT051451 CABLES1 Cdk5 and Abl enzyme substrate 1 1 1
MIRT051452 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 1
MIRT051453 C12orf49 chromosome 12 open reading frame 49 1 1
MIRT051454 TIMP3 TIMP metallopeptidase inhibitor 3 1 1
MIRT051455 WBSCR16 RCC1 like 1 1
MIRT051456 SLC2A11 solute carrier family 2 member 11 1 1
MIRT051457 NF1 neurofibromin 1 1 1
MIRT051458 LRRC8A leucine rich repeat containing 8 VRAC subunit A 1 1
MIRT051459 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT051460 DTNB dystrobrevin beta 1 1
MIRT051461 SCMH1 Scm polycomb group protein homolog 1 1 1
MIRT051462 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT051463 RHBDD2 rhomboid domain containing 2 1 1
MIRT051464 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT051465 NDST1 N-deacetylase and N-sulfotransferase 1 1 1
MIRT051466 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 5
MIRT051467 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT051468 BAHCC1 BAH domain and coiled-coil containing 1 1 1
MIRT051469 CARM1 coactivator associated arginine methyltransferase 1 1 1
MIRT051470 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT051471 ND3 NADH dehydrogenase, subunit 3 (complex I) 1 1
MIRT051472 PIGS phosphatidylinositol glycan anchor biosynthesis class S 1 1
MIRT051473 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT051474 RPN2 ribophorin II 1 1
MIRT051475 RPL12 ribosomal protein L12 1 1
MIRT051476 NME4 NME/NM23 nucleoside diphosphate kinase 4 1 1
MIRT051477 IVD isovaleryl-CoA dehydrogenase 1 1
MIRT051478 JAZF1 JAZF zinc finger 1 1 1
MIRT051479 ND4 NADH dehydrogenase, subunit 4 (complex I) 1 1
MIRT051480 VARS valyl-tRNA synthetase 1 1
MIRT051481 RNF26 ring finger protein 26 1 1
MIRT051482 LHFPL2 LHFPL tetraspan subfamily member 2 1 1
MIRT051483 ARCN1 archain 1 1 1
MIRT051484 COX1 cytochrome c oxidase subunit I 1 1
MIRT051485 SLC12A4 solute carrier family 12 member 4 1 1
MIRT051486 AEBP2 AE binding protein 2 1 1
MIRT051487 PET112 glutamyl-tRNA amidotransferase subunit B 1 1
MIRT051488 UROC1 urocanate hydratase 1 1 1
MIRT051489 IGF1R insulin like growth factor 1 receptor 5 10
MIRT051490 BSDC1 BSD domain containing 1 1 1
MIRT051491 PTK2 protein tyrosine kinase 2 1 1
MIRT051492 CDC5L cell division cycle 5 like 1 1
MIRT051493 EN2 engrailed homeobox 2 1 1
MIRT051494 SSB Sjogren syndrome antigen B 1 1
MIRT051495 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT051496 RRAGC Ras related GTP binding C 1 1
MIRT051497 ZNF236 zinc finger protein 236 1 1
MIRT051498 SEMA4B semaphorin 4B 1 1
MIRT051499 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT051500 XIAP X-linked inhibitor of apoptosis 1 1
MIRT051501 GTF2I general transcription factor IIi 1 1
MIRT051502 JMJD1C jumonji domain containing 1C 1 1
MIRT051503 OTUD5 OTU deubiquitinase 5 1 1
MIRT051504 NOLC1 nucleolar and coiled-body phosphoprotein 1 1 1
MIRT051505 PPIG peptidylprolyl isomerase G 1 1
MIRT051506 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT051507 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 1 1
MIRT051508 VAMP2 vesicle associated membrane protein 2 1 1
MIRT051509 LSR lipolysis stimulated lipoprotein receptor 1 1
MIRT051510 KIAA0355 KIAA0355 1 1
MIRT051511 RPSA ribosomal protein SA 1 1
MIRT051512 DCAF6 DDB1 and CUL4 associated factor 6 1 1
MIRT051513 UHRF1BP1 UHRF1 binding protein 1 1 1
MIRT051514 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 1 1
MIRT051515 PIGP phosphatidylinositol glycan anchor biosynthesis class P 1 1
MIRT051516 LMLN leishmanolysin like peptidase 1 1
MIRT051517 PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 1 1
MIRT051518 HIPK1 homeodomain interacting protein kinase 1 1 1
MIRT051519 SERF2 small EDRK-rich factor 2 1 1
MIRT051520 RBM4 RNA binding motif protein 4 1 1
MIRT051521 RBM14 RNA binding motif protein 14 1 1
MIRT051522 HMGB1 high mobility group box 1 1 1
MIRT051523 GMPS guanine monophosphate synthase 1 1
MIRT051524 DIAPH1 diaphanous related formin 1 1 1
MIRT051525 STAM signal transducing adaptor molecule 1 1
MIRT051526 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT051527 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 1 1
MIRT051528 MARCH5 membrane associated ring-CH-type finger 5 1 1
MIRT051529 SQLE squalene epoxidase 1 1
MIRT051530 TIMM50 translocase of inner mitochondrial membrane 50 1 1
MIRT051531 NDUFA3 NADH:ubiquinone oxidoreductase subunit A3 1 1
MIRT051532 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 1 1
MIRT051533 NRSN2 neurensin 2 1 1
MIRT051534 SALL1 spalt like transcription factor 1 1 1
MIRT051535 COX3 cytochrome c oxidase III 1 1
MIRT051536 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT051537 SUPT4H1 SPT4 homolog, DSIF elongation factor subunit 1 1
MIRT051538 PACS2 phosphofurin acidic cluster sorting protein 2 1 1
MIRT051539 MTMR14 myotubularin related protein 14 1 1
MIRT051540 LUZP1 leucine zipper protein 1 1 1
MIRT051541 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT051542 SUZ12 SUZ12 polycomb repressive complex 2 subunit 1 1
MIRT051543 PAPD4 poly(A) RNA polymerase D4, non-canonical 1 1
MIRT051544 QSOX1 quiescin sulfhydryl oxidase 1 1 1
MIRT051545 SPATA13 spermatogenesis associated 13 1 1
MIRT051546 DHX57 DExH-box helicase 57 1 1
MIRT051547 KATNB1 katanin regulatory subunit B1 1 1
MIRT051548 COL6A1 collagen type VI alpha 1 chain 1 1
MIRT051549 DHX15 DEAH-box helicase 15 1 1
MIRT051550 MTCH2 mitochondrial carrier 2 1 1
MIRT051551 KIAA0100 KIAA0100 1 1
MIRT051552 SUGP2 SURP and G-patch domain containing 2 1 1
MIRT051553 NCLN nicalin 1 1
MIRT051554 ATXN2L ataxin 2 like 1 1
MIRT051555 CHD9 chromodomain helicase DNA binding protein 9 1 1
MIRT051556 PES1 pescadillo ribosomal biogenesis factor 1 1 1
MIRT051557 NUP155 nucleoporin 155 2 7
MIRT051558 GNG5 G protein subunit gamma 5 2 3
MIRT051559 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT051560 MTFR1 mitochondrial fission regulator 1 1 1
MIRT051561 IRS2 insulin receptor substrate 2 2 1
MIRT051562 IRS4 insulin receptor substrate 4 1 1
MIRT051563 PPP1R10 protein phosphatase 1 regulatory subunit 10 1 1
MIRT051564 ZNF284 zinc finger protein 284 1 1
MIRT051565 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 1 1
MIRT051566 SCD stearoyl-CoA desaturase 1 1
MIRT051567 FDPS farnesyl diphosphate synthase 1 1
MIRT051568 KRBOX4 KRAB box domain containing 4 1 1
MIRT051569 BRI3 brain protein I3 1 1
MIRT051570 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT051571 PYCR1 pyrroline-5-carboxylate reductase 1 1 1
MIRT051572 SMAP2 small ArfGAP2 1 1
MIRT051573 WDFY3 WD repeat and FYVE domain containing 3 1 1
MIRT051574 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT051575 SRSF2 serine and arginine rich splicing factor 2 1 1
MIRT051576 PGD phosphogluconate dehydrogenase 1 1
MIRT051577 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT051578 ZNF652 zinc finger protein 652 1 1
MIRT051579 PSMA6 proteasome subunit alpha 6 1 1
MIRT051580 SLC38A2 solute carrier family 38 member 2 1 1
MIRT051581 LRRC41 leucine rich repeat containing 41 1 1
MIRT051582 RANBP2 RAN binding protein 2 1 1
MIRT051583 SVIL supervillin 1 1
MIRT051584 CCNG1 cyclin G1 1 1
MIRT051585 ZNF256 zinc finger protein 256 1 1
MIRT051586 COPG1 coatomer protein complex subunit gamma 1 1 1
MIRT051587 PDCD11 programmed cell death 11 1 1
MIRT051588 CNBP CCHC-type zinc finger nucleic acid binding protein 1 1
MIRT051589 USP37 ubiquitin specific peptidase 37 1 1
MIRT051590 UBE2V2 ubiquitin conjugating enzyme E2 V2 1 1
MIRT051591 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT051592 LMNA lamin A/C 1 1
MIRT051593 STAT3 signal transducer and activator of transcription 3 1 1
MIRT051594 TRPV1 transient receptor potential cation channel subfamily V member 1 1 1
MIRT051595 MATR3 matrin 3 1 1
MIRT051596 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 1
MIRT051597 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 1 1
MIRT051598 WDR48 WD repeat domain 48 1 1
MIRT051599 RBM8A RNA binding motif protein 8A 1 1
MIRT051600 SCYL1 SCY1 like pseudokinase 1 1 1
MIRT051601 C19orf48 chromosome 19 open reading frame 48 1 1
MIRT051602 FOXD4L6 forkhead box D4 like 6 1 1
MIRT051603 PIGN phosphatidylinositol glycan anchor biosynthesis class N 1 1
MIRT051604 SPCS3 signal peptidase complex subunit 3 1 1
MIRT051605 TNFAIP1 TNF alpha induced protein 1 1 1
MIRT051606 MS4A10 membrane spanning 4-domains A10 1 1
MIRT051607 MSMO1 methylsterol monooxygenase 1 1 1
MIRT051608 ARID1A AT-rich interaction domain 1A 1 1
MIRT051609 NCKIPSD NCK interacting protein with SH3 domain 2 5
MIRT051610 NCBP1 nuclear cap binding protein subunit 1 1 1
MIRT051611 COX16 COX16, cytochrome c oxidase assembly homolog 1 1
MIRT051612 NUDT8 nudix hydrolase 8 1 1
MIRT051613 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT051614 TXNRD1 thioredoxin reductase 1 1 1
MIRT051615 ELMSAN1 ELM2 and Myb/SANT domain containing 1 1 1
MIRT051616 CTSA cathepsin A 1 1
MIRT051617 PRRC2A proline rich coiled-coil 2A 1 1
MIRT051618 SPAG9 sperm associated antigen 9 1 1
MIRT051619 AGMAT agmatinase 1 1
MIRT051620 NCKAP5L NCK associated protein 5 like 1 1
MIRT051621 ZFP62 ZFP62 zinc finger protein 1 1
MIRT051622 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1 1
MIRT051623 POLR3D RNA polymerase III subunit D 2 3
MIRT051624 PRPF8 pre-mRNA processing factor 8 1 1
MIRT051625 ATP6 ATP synthase F0 subunit 6 1 1
MIRT051626 ZFAND5 zinc finger AN1-type containing 5 1 1
MIRT051627 BAZ1B bromodomain adjacent to zinc finger domain 1B 1 1
MIRT051628 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT051629 BMP2K BMP2 inducible kinase 1 1
MIRT051630 SPN sialophorin 1 1
MIRT051631 PA2G4 proliferation-associated 2G4 1 1
MIRT051632 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 1
MIRT051633 TUBB4B tubulin beta 4B class IVb 1 1
MIRT051634 TRRAP transformation/transcription domain associated protein 1 1
MIRT051635 SLCO4A1 solute carrier organic anion transporter family member 4A1 1 1
MIRT051636 CCRN4L nocturnin 1 1
MIRT051637 USE1 unconventional SNARE in the ER 1 1 1
MIRT051638 STARD7 StAR related lipid transfer domain containing 7 1 1
MIRT051639 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 3
MIRT051640 CLTC clathrin heavy chain 1 1
MIRT051641 TERF1 telomeric repeat binding factor 1 1 1
MIRT051642 PAX3 paired box 3 1 1
MIRT051643 CCDC97 coiled-coil domain containing 97 1 1
MIRT051644 HLA-C major histocompatibility complex, class I, C 1 1
MIRT051645 GTPBP8 GTP binding protein 8 (putative) 1 1
MIRT051646 VGLL4 vestigial like family member 4 1 1
MIRT051647 ANKRD40 ankyrin repeat domain 40 1 1
MIRT051648 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 1 1
MIRT051649 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT051650 DSP desmoplakin 1 1
MIRT051651 UBN2 ubinuclein 2 1 1
MIRT051652 ZNF805 zinc finger protein 805 1 1
MIRT051653 RBBP4 RB binding protein 4, chromatin remodeling factor 1 1
MIRT051654 OCLN occludin 1 1
MIRT051655 CBX5 chromobox 5 2 3
MIRT051656 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT051657 MKI67 marker of proliferation Ki-67 1 1
MIRT051658 SUB1 SUB1 homolog, transcriptional regulator 1 1
MIRT051659 RSL1D1 ribosomal L1 domain containing 1 1 1
MIRT051660 SEC23IP SEC23 interacting protein 1 1
MIRT051661 RNMT RNA guanine-7 methyltransferase 1 1
MIRT051662 SGSM3 small G protein signaling modulator 3 1 1
MIRT051663 ZFP3 ZFP3 zinc finger protein 1 1
MIRT051664 GLUL glutamate-ammonia ligase 1 1
MIRT051665 POLD1 DNA polymerase delta 1, catalytic subunit 1 1
MIRT051666 WDR4 WD repeat domain 4 1 1
MIRT051667 PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 1 1
MIRT051668 RAI2 retinoic acid induced 2 1 1
MIRT051669 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 1 1
MIRT051670 UTP15 UTP15, small subunit processome component 1 1
MIRT051671 THADA THADA, armadillo repeat containing 1 1
MIRT051672 ZNF451 zinc finger protein 451 1 1
MIRT051673 CREBBP CREB binding protein 1 1
MIRT051674 ZNF770 zinc finger protein 770 1 1
MIRT051675 CLDN4 claudin 4 1 1
MIRT051676 ZKSCAN7 zinc finger with KRAB and SCAN domains 7 1 1
MIRT051677 NICN1 nicolin 1 1 1
MIRT051678 RPLP2 ribosomal protein lateral stalk subunit P2 1 1
MIRT051679 DCBLD2 discoidin, CUB and LCCL domain containing 2 1 1
MIRT051680 IRGQ immunity related GTPase Q 1 1
MIRT051681 CA5B carbonic anhydrase 5B 1 1
MIRT051682 COX14 COX14, cytochrome c oxidase assembly factor 1 1
MIRT051683 PSD3 pleckstrin and Sec7 domain containing 3 1 1
MIRT051684 RPL27A ribosomal protein L27a 1 1
MIRT051685 CWC15 CWC15 spliceosome associated protein homolog 1 1
MIRT051686 NT5DC2 5'-nucleotidase domain containing 2 1 1
MIRT051687 OR7D2 olfactory receptor family 7 subfamily D member 2 1 1
MIRT051688 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 1 1
MIRT051689 NUDT15 nudix hydrolase 15 1 1
MIRT051690 CDH18 cadherin 18 1 1
MIRT051691 FAM160B1 family with sequence similarity 160 member B1 1 1
MIRT051692 DZIP1 DAZ interacting zinc finger protein 1 1 1
MIRT051693 TDRD7 tudor domain containing 7 1 1
MIRT051694 TCF4 transcription factor 4 1 1
MIRT051695 ENSA endosulfine alpha 1 1
MIRT051696 GTF3C1 general transcription factor IIIC subunit 1 1 1
MIRT051697 TNFRSF1A TNF receptor superfamily member 1A 1 1
MIRT051698 CCDC113 coiled-coil domain containing 113 1 1
MIRT051699 MYO9B myosin IXB 1 1
MIRT051700 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 1 1
MIRT051701 PRAMEF13 PRAME family member 13 1 1
MIRT051702 PMPCA peptidase, mitochondrial processing alpha subunit 2 5
MIRT051703 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT051704 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT051705 CCDC106 coiled-coil domain containing 106 1 1
MIRT051706 CYP2B6 cytochrome P450 family 2 subfamily B member 6 1 1
MIRT051707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 3
MIRT051708 PSME4 proteasome activator subunit 4 1 1
MIRT051709 SETD1A SET domain containing 1A 1 1
MIRT054561 MMP9 matrix metallopeptidase 9 3 1
MIRT054579 IGF1 insulin like growth factor 1 3 1
MIRT063195 ADIPOR2 adiponectin receptor 2 2 2
MIRT065687 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT067399 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT068154 TXLNA taxilin alpha 2 2
MIRT068528 NHLRC3 NHL repeat containing 3 2 6
MIRT068789 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT073006 ARID3B AT-rich interaction domain 3B 2 6
MIRT076223 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT077616 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT080398 ONECUT2 one cut homeobox 2 2 2
MIRT083300 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT084976 BACH1 BTB domain and CNC homolog 1 2 2
MIRT094160 PCGF3 polycomb group ring finger 3 2 6
MIRT094460 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT095766 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT100094 ABT1 activator of basal transcription 1 2 8
MIRT112242 MDM4 MDM4, p53 regulator 2 4
MIRT118586 STK4 serine/threonine kinase 4 2 2
MIRT120921 PDE12 phosphodiesterase 12 2 8
MIRT123317 CALU calumenin 2 2
MIRT152272 TNFSF9 TNF superfamily member 9 2 2
MIRT153847 NCOA3 nuclear receptor coactivator 3 2 2
MIRT168583 HMGA1 high mobility group AT-hook 1 2 4
MIRT180603 CRY2 cryptochrome circadian clock 2 2 2
MIRT187717 SUOX sulfite oxidase 2 2
MIRT191404 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT193101 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT215720 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT218815 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT240330 UBXN2B UBX domain protein 2B 2 2
MIRT243473 TRIM71 tripartite motif containing 71 2 2
MIRT244069 EDN1 endothelin 1 2 2
MIRT252330 SALL3 spalt like transcription factor 3 2 2
MIRT255314 CDV3 CDV3 homolog 2 2
MIRT259277 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT259479 TXLNG taxilin gamma 2 2
MIRT260707 CLDN12 claudin 12 2 6
MIRT264693 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT266212 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT266626 CHTOP chromatin target of PRMT1 2 2
MIRT268839 C1ORF21 chromosome 1 open reading frame 21 2 2
MIRT294446 ZNF264 zinc finger protein 264 2 2
MIRT297013 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT297443 SLC20A1 solute carrier family 20 member 1 2 4
MIRT300037 BZW1 basic leucine zipper and W2 domains 1 2 4
MIRT300893 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT303320 MXD1 MAX dimerization protein 1 2 2
MIRT309846 NAT8L N-acetyltransferase 8 like 2 2
MIRT322428 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT324731 ACER2 alkaline ceramidase 2 2 2
MIRT402057 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437395 LIN28A lin-28 homolog A 4 1
MIRT437396 AURKB aurora kinase B 4 1
MIRT437435 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 1
MIRT438632 TNFRSF10B TNF receptor superfamily member 10b 2 1
MIRT439135 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT442020 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT445658 ATP6V1G1 ATPase H+ transporting V1 subunit G1 2 6
MIRT447136 KIF27 kinesin family member 27 2 2
MIRT448259 ZNF774 zinc finger protein 774 2 2
MIRT449005 ANKRD46 ankyrin repeat domain 46 2 2
MIRT449953 FMNL3 formin like 3 2 2
MIRT451155 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451624 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451693 C1RL complement C1r subcomponent like 2 2
MIRT452092 NUCB2 nucleobindin 2 2 2
MIRT452431 QDPR quinoid dihydropteridine reductase 2 2
MIRT452943 DISC1 disrupted in schizophrenia 1 2 2
MIRT453401 RHD Rh blood group D antigen 2 6
MIRT454164 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT454280 FXN frataxin 2 2
MIRT454539 RABL2A RAB, member of RAS oncogene family like 2A 2 2
MIRT454854 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455676 GLO1 glyoxalase I 2 2
MIRT457248 RABL2B RAB, member of RAS oncogene family like 2B 2 2
MIRT457677 ZNF587 zinc finger protein 587 2 2
MIRT457887 THEM6 thioesterase superfamily member 6 2 4
MIRT458016 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458279 FUT10 fucosyltransferase 10 2 2
MIRT459736 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT460453 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460500 FAM105A family with sequence similarity 105 member A 2 6
MIRT460938 NOA1 nitric oxide associated 1 2 4
MIRT461092 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461169 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461364 COL8A1 collagen type VIII alpha 1 chain 2 2
MIRT462382 YAE1D1 Yae1 domain containing 1 2 2
MIRT462780 ZNF8 zinc finger protein 8 2 2
MIRT463420 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463662 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT464265 VCL vinculin 2 2
MIRT465122 TSC22D2 TSC22 domain family member 2 2 4
MIRT466184 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466722 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT469102 RNF144B ring finger protein 144B 2 2
MIRT469714 RAB40C RAB40C, member RAS oncogene family 2 2
MIRT470425 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT470679 POLR2D RNA polymerase II subunit D 2 4
MIRT470861 PLXND1 plexin D1 2 2
MIRT471271 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471957 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472672 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 2 2
MIRT472739 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473134 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT473234 SMCR7L mitochondrial elongation factor 1 1 4
MIRT473828 MAP2K7 mitogen-activated protein kinase kinase 7 2 2
MIRT473940 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT474022 LRRC20 leucine rich repeat containing 20 2 2
MIRT474502 KLHDC8B kelch domain containing 8B 2 2
MIRT474766 KIAA0930 KIAA0930 2 2
MIRT474905 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT475331 IFNLR1 interferon lambda receptor 1 2 2
MIRT475379 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT475733 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT476548 GABPB1 GA binding protein transcription factor beta subunit 1 2 4
MIRT476973 FAM83G family with sequence similarity 83 member G 2 4
MIRT477534 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 2 4
MIRT477682 EFHD2 EF-hand domain family member D2 2 2
MIRT481201 ATXN7L3B ataxin 7 like 3B 2 4
MIRT481241 ATXN7L3 ataxin 7 like 3 2 2
MIRT481363 ATG9A autophagy related 9A 2 2
MIRT481388 ATG12 autophagy related 12 2 2
MIRT481652 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT481851 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT482184 AHR aryl hydrocarbon receptor 2 2
MIRT482220 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT485296 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT486659 ZNF28 zinc finger protein 28 2 2
MIRT489413 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491867 ZBTB5 zinc finger and BTB domain containing 5 2 8
MIRT492216 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492626 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT493323 LIMD2 LIM domain containing 2 2 2
MIRT493901 FAM43A family with sequence similarity 43 member A 2 4
MIRT494263 CEP120 centrosomal protein 120 2 2
MIRT494687 ARID3A AT-rich interaction domain 3A 2 2
MIRT495968 TBC1D19 TBC1 domain family member 19 2 2
MIRT496111 SNX17 sorting nexin 17 2 2
MIRT497875 SLC12A7 solute carrier family 12 member 7 2 2
MIRT498122 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT499405 PLCG2 phospholipase C gamma 2 2 4
MIRT499493 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 2
MIRT499653 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 2 2
MIRT499942 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT499997 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT500819 THBS1 thrombospondin 1 2 3
MIRT500902 STRN striatin 2 4
MIRT501118 SLC5A6 solute carrier family 5 member 6 2 4
MIRT501173 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT501241 SEMA4C semaphorin 4C 2 6
MIRT501328 RNFT1 ring finger protein, transmembrane 1 2 2
MIRT501355 RNF44 ring finger protein 44 2 4
MIRT501387 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT501441 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT501759 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501943 MBD2 methyl-CpG binding domain protein 2 2 8
MIRT502106 KPNA5 karyopherin subunit alpha 5 2 8
MIRT502130 KMT2D lysine methyltransferase 2D 2 4
MIRT502784 CEP135 centrosomal protein 135 2 2
MIRT502845 CELF1 CUGBP Elav-like family member 1 2 2
MIRT504789 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT505017 ZNF644 zinc finger protein 644 2 2
MIRT506942 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT507252 FIGN fidgetin, microtubule severing factor 2 8
MIRT507694 COIL coilin 2 6
MIRT508401 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508665 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT508932 AK4 adenylate kinase 4 2 4
MIRT510395 ZNF566 zinc finger protein 566 2 6
MIRT510518 YOD1 YOD1 deubiquitinase 2 6
MIRT511386 IKZF3 IKAROS family zinc finger 3 2 4
MIRT512745 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT515954 C9orf156 tRNA methyltransferase O 2 2
MIRT516083 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT523619 FZD9 frizzled class receptor 9 2 4
MIRT523733 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523990 DVL3 dishevelled segment polarity protein 3 2 2
MIRT524113 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT525727 SOD2 superoxide dismutase 2 2 2
MIRT527763 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT529727 OPRL1 opioid related nociceptin receptor 1 2 2
MIRT533187 WASL Wiskott-Aldrich syndrome like 2 6
MIRT536378 LEFTY1 left-right determination factor 1 2 2
MIRT543785 RBM12B RNA binding motif protein 12B 2 4
MIRT543868 SLC16A9 solute carrier family 16 member 9 2 2
MIRT545387 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545890 ZNF200 zinc finger protein 200 2 4
MIRT546334 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547373 MSI2 musashi RNA binding protein 2 2 2
MIRT547579 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548264 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT548351 EPHA4 EPH receptor A4 2 2
MIRT548534 DUSP1 dual specificity phosphatase 1 2 2
MIRT548560 DNAL1 dynein axonemal light chain 1 2 2
MIRT548779 COLEC12 collectin subfamily member 12 2 2
MIRT548978 CCNT2 cyclin T2 2 2
MIRT549208 BEND4 BEN domain containing 4 2 4
MIRT549763 ZNF611 zinc finger protein 611 2 6
MIRT549799 KIAA0391 KIAA0391 2 2
MIRT549847 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 2
MIRT550898 ACTA1 actin, alpha 1, skeletal muscle 2 2
MIRT551283 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551318 GSG2 histone H3 associated protein kinase 2 6
MIRT551932 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552003 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT552410 ZNF460 zinc finger protein 460 2 4
MIRT553013 USP38 ubiquitin specific peptidase 38 2 2
MIRT555550 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT555711 PDZD8 PDZ domain containing 8 2 2
MIRT557372 HAND1 heart and neural crest derivatives expressed 1 2 2
MIRT557960 FAM222B family with sequence similarity 222 member B 2 2
MIRT559087 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559497 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT561772 PEG10 paternally expressed 10 2 2
MIRT564402 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT565443 SURF4 surfeit 4 2 2
MIRT566518 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT567715 E2F6 E2F transcription factor 6 2 2
MIRT568655 ABHD17C abhydrolase domain containing 17C 2 2
MIRT569498 THYN1 thymocyte nuclear protein 1 2 2
MIRT573820 TGOLN2 trans-golgi network protein 2 2 2
MIRT574363 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT574750 GOLGA4 golgin A4 2 2
MIRT574788 FAM104A family with sequence similarity 104 member A 2 2
MIRT576089 Poteg POTE ankyrin domain family, member G 2 2
MIRT576812 Thbs1 thrombospondin 1 2 3
MIRT616370 RWDD1 RWD domain containing 1 2 2
MIRT617851 FMO4 flavin containing monooxygenase 4 2 2
MIRT642394 ZNF556 zinc finger protein 556 2 2
MIRT680519 PRIM2 DNA primase subunit 2 2 2
MIRT680547 ZNF584 zinc finger protein 584 2 2
MIRT680800 ZNF578 zinc finger protein 578 2 2
MIRT680838 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT681141 INTS7 integrator complex subunit 7 2 2
MIRT681271 RFC2 replication factor C subunit 2 2 2
MIRT681323 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT681359 BRI3BP BRI3 binding protein 2 2
MIRT681506 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681536 ZNF738 zinc finger protein 738 2 2
MIRT681658 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT681738 RAB19 RAB19, member RAS oncogene family 2 4
MIRT681797 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681869 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT681941 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682102 ITGA3 integrin subunit alpha 3 2 4
MIRT682181 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682238 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682384 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682444 MTX3 metaxin 3 2 2
MIRT682604 CPA4 carboxypeptidase A4 2 2
MIRT682640 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT689327 FPR1 formyl peptide receptor 1 2 2
MIRT689730 ATXN2 ataxin 2 2 2
MIRT691036 ZNF799 zinc finger protein 799 2 2
MIRT691935 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT694884 ZNF417 zinc finger protein 417 2 2
MIRT695255 ZNF443 zinc finger protein 443 2 2
MIRT695413 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT700589 PRSS22 protease, serine 22 2 2
MIRT701428 NHLRC2 NHL repeat containing 2 2 2
MIRT702484 KIAA1328 KIAA1328 2 2
MIRT702715 IPO9 importin 9 2 2
MIRT704028 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT704418 CTPS1 CTP synthase 1 2 2
MIRT705750 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT712373 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT713520 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT731263 FASLG Fas ligand 3 1
MIRT732697 Ccr7 chemokine (C-C motif) receptor 7 2 0
MIRT732700 Snhg12 small nucleolar RNA host gene 12 2 0
MIRT734626 SYT7 synaptotagmin 7 1 0
MIRT755829 UBQLN4 ubiquilin 4 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
let-7e Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
let-7e Hydroxamic acid HDACi LAQ824 NULL NULL Microarray breast cancer cell line SKBr3 16452179 2006 down-regulated
let-7e Doxorubicin approved 31703 Microarray ovarian cancer 19237188 2009 up-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
let-7e Etoposide approved 36462 Microarray Normal human fibroblasts (AG01522) 19633716 2009 up-regulated
let-7e Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
let-7e 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 down-regulated
let-7e Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
let-7e Marine fungal metabolite 1386A NULL NULL Microarray MCF-7 breast cancer cells. 22159329 2012 down-regulated
let-7e Ginsenoside Rh2 NULL 119307 Microarray NSCLC cell line A549 23152132 2013 down-regulated
let-7e 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) NULL 16078949 Microarray hepatocytes 23107762 2013 up-regulated
let-7e Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Doxorubicin 31703 NSC123127 approved resistant High Ovarian Cancer cell line (OV19, TOV21G, TOV112D, FUOV1, C13, OV2008, A2780CP, A2780S, IGROV1, T8, OVCAR5, IMCC3, A2008, OVCAR3, SKOV3, IOSER)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Tongue Squamous Cell Carcinoma cell line (Tca8113)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant High Colon Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer tissue and cell line (A2780)
hsa-let-7e Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Vincristine 5978 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive High Lung Adenocarcinoma cell line (A549)
hsa-let-7e Imatinib 5291 NSC743414 approved resistant High Gastrointestinal Stromal Tumor tissue
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Adenocarcinoma cell line (OE19)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer tissue and cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780, HO8910, ES2, CAOV3, SKOV3)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive Low Colorectal Cancer cell line (HCT-8)
hsa-let-7e Daunorubicin 30323 NSC82151 approved resistant High Acute Promyelocytic Leukemia cell line (HL60)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7C)
hsa-let-7e Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (PC-9)
hsa-let-7e Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Regorafenib 11167602 NSC763932 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-let-7e Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-let-7e 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-let-7e Ethanol+Tamoxifen resistant cell line (LY2)
hsa-let-7e Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-let-7e Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-let-7e Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-let-7e Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-let-7e Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-let-7e Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-let-7e-5p Alvocidib 5287969 NSC649890 resistant
hsa-let-7e-5p Ethyl, methoxy, prodigisine 135829283 NSC742418 resistant
hsa-let-7e-5p Platinum 23939 resistant Low Ovarian Cancer tissue
hsa-let-7e-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (AsPC-1)
hsa-let-7e-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-let-7e-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-let-7e-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-let-7e-5p Sunitinib 5329102 NSC750690 approved sensitive tissue (clear cell renal cell carcinoma)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-let-7e-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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