pre-miRNA Information
pre-miRNA hsa-let-7e   
Genomic Coordinates chr19: 51692786 - 51692864
Synonyms MIRNLET7E, hsa-let-7e, let-7e, MIRLET7E
Description Homo sapiens let-7e stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7e-5p
Sequence 8| UGAGGUAGGAGGUUGUAUAGUU |29
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1189776118 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol GNG5   
Synonyms -
Description G protein subunit gamma 5
Transcript NM_005274   
Expression
Putative miRNA Targets on GNG5
3'UTR of GNG5
(miRNA target sites are highlighted)
>GNG5|NM_005274|3'UTR
   1 TAAAATGAATCTTTCAAAGGTTTCCCAAACCACTCCTTATGATCCAGTGAATATTCAAGAGAGCTACATTTGAAGCCTGT
  81 ACAAAAGCTTATCCCTGTAACACATGTGCCATAATATACAAACTTCTACTTTCGTCAGTCCTTAACATCTACCTCTCTGA
 161 ATTTTCATGAATTTCTATTTCACAAGGGTAATTGTTTTATATACACTGGCAGCAGCATACAATAAAACTTAGTATGAAAC
 241 TTTTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uugAUAUGUUGGAGGAUGGAGu 5'
             ||||||| ||:||||:|: 
Target 5' taaTATACAAACTTCTACTTTc 3'
112 - 133 151.00 -16.60
2
miRNA  3' uugauauGUUGGAGGAUGGAGu 5'
                 :||| | ||||||| 
Target 5' cagtcctTAACAT-CTACCTCt 3'
136 - 156 150.00 -13.00
3
miRNA  3' uugauaUGUUGGAGGAUGGAGu 5'
                |::| :|:|||::|| 
Target 5' attttcATGAATTTCTATTTCa 3'
161 - 182 124.00 -10.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26977656 7 COSMIC
COSN6048432 337 COSMIC
COSN7285216 386 COSMIC
COSN5205907 701 COSMIC
COSN21430301 981 COSMIC
COSN25524392 1023 COSMIC
COSN22740284 1218 COSMIC
COSN21646988 1675 COSMIC
COSN6471158 1804 COSMIC
COSN19552240 1892 COSMIC
COSN1109273 2275 COSMIC
COSN16199526 2282 COSMIC
COSN19026730 2294 COSMIC
COSN29293568 2619 COSMIC
COSN22414751 2627 COSMIC
COSN15202600 2909 COSMIC
COSN5378413 3035 COSMIC
COSN16676760 3039 COSMIC
COSN1461094 3057 COSMIC
COSN8638806 3286 COSMIC
COSN5378412 3310 COSMIC
COSN30176961 3426 COSMIC
COSN26562223 3481 COSMIC
COSN31547206 3492 COSMIC
rs56212819 1905 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1374631248 2 dbSNP
rs1169024782 3 dbSNP
rs1453505546 5 dbSNP
rs773165236 9 dbSNP
rs1191970211 10 dbSNP
rs376413491 12 dbSNP
rs374965713 18 dbSNP
rs530241945 28 dbSNP
rs754981550 35 dbSNP
rs186447333 41 dbSNP
rs749771547 42 dbSNP
rs775937717 44 dbSNP
rs746752998 46 dbSNP
rs544602898 47 dbSNP
rs375777276 48 dbSNP
rs1288850884 53 dbSNP
rs1007303271 54 dbSNP
rs922550869 55 dbSNP
rs1250473277 69 dbSNP
rs1337012017 77 dbSNP
rs1217911394 80 dbSNP
rs1353089017 84 dbSNP
rs978288522 93 dbSNP
rs1490032810 97 dbSNP
rs890102784 106 dbSNP
rs1199336427 110 dbSNP
rs1247292128 116 dbSNP
rs756752294 121 dbSNP
rs1435339303 123 dbSNP
rs1199988494 124 dbSNP
rs1372769513 125 dbSNP
rs998544502 128 dbSNP
rs1341351397 138 dbSNP
rs1312244064 149 dbSNP
rs531266843 153 dbSNP
rs1011024083 157 dbSNP
rs1043317258 162 dbSNP
rs1387180418 163 dbSNP
rs1342128334 170 dbSNP
rs1324422797 181 dbSNP
rs565564539 184 dbSNP
rs1297791421 191 dbSNP
rs1298747346 191 dbSNP
rs769603030 193 dbSNP
rs947502504 194 dbSNP
rs1033720915 196 dbSNP
rs1003790912 198 dbSNP
rs916113508 199 dbSNP
rs1264271385 209 dbSNP
rs545462164 212 dbSNP
rs1418978459 220 dbSNP
rs1210907027 228 dbSNP
rs1261510403 231 dbSNP
rs1447971106 235 dbSNP
rs1055884466 240 dbSNP
rs1190767695 250 dbSNP
rs541429966 257 dbSNP
rs551513503 258 dbSNP
rs1444153989 259 dbSNP
rs1164543548 265 dbSNP
rs573226315 267 dbSNP
rs553512015 271 dbSNP
rs928637908 286 dbSNP
rs1458371674 292 dbSNP
rs372544418 293 dbSNP
rs774250155 295 dbSNP
rs1047981359 298 dbSNP
rs994050959 304 dbSNP
rs115781592 307 dbSNP
rs574565733 308 dbSNP
rs777544545 321 dbSNP
rs1243203929 323 dbSNP
rs951417187 326 dbSNP
rs919137107 331 dbSNP
rs941150940 333 dbSNP
rs1260587545 334 dbSNP
rs2063038 339 dbSNP
rs1210960884 341 dbSNP
rs147249335 342 dbSNP
rs869231869 343 dbSNP
rs1180290718 344 dbSNP
rs973381015 353 dbSNP
rs1416095016 356 dbSNP
rs1424406400 362 dbSNP
rs963180167 368 dbSNP
rs1409646720 371 dbSNP
rs559649141 377 dbSNP
rs1458680220 384 dbSNP
rs149653206 385 dbSNP
rs371573713 385 dbSNP
rs1017415662 390 dbSNP
rs181147507 391 dbSNP
rs537628183 392 dbSNP
rs1265142707 397 dbSNP
rs915102248 401 dbSNP
rs568852195 403 dbSNP
rs1278550099 408 dbSNP
rs989562181 409 dbSNP
rs1030099526 416 dbSNP
rs1323232553 416 dbSNP
rs17110485 417 dbSNP
rs1483654072 420 dbSNP
rs1176686494 425 dbSNP
rs1324657134 429 dbSNP
rs1249579904 431 dbSNP
rs370510172 434 dbSNP
rs1182763153 437 dbSNP
rs1386902380 451 dbSNP
rs1043693894 454 dbSNP
rs1011872493 455 dbSNP
rs191617672 457 dbSNP
rs1461076935 460 dbSNP
rs1466831154 460 dbSNP
rs1056001955 461 dbSNP
rs1351751732 468 dbSNP
rs1412264088 472 dbSNP
rs1289455846 473 dbSNP
rs1171895389 475 dbSNP
rs1217821608 485 dbSNP
rs1281078122 487 dbSNP
rs577104019 491 dbSNP
rs938851662 494 dbSNP
rs1477683293 495 dbSNP
rs928673504 507 dbSNP
rs1420551519 509 dbSNP
rs899324145 520 dbSNP
rs1240936088 531 dbSNP
rs1484038905 533 dbSNP
rs1182826943 538 dbSNP
rs1268076647 542 dbSNP
rs1201631389 545 dbSNP
rs1016420096 555 dbSNP
rs1007687866 557 dbSNP
rs1427575775 560 dbSNP
rs566092403 563 dbSNP
rs1371879007 566 dbSNP
rs1429766129 568 dbSNP
rs1309233271 572 dbSNP
rs1047152939 574 dbSNP
rs889492889 577 dbSNP
rs929961510 583 dbSNP
rs919978754 591 dbSNP
rs1049486160 596 dbSNP
rs1295600887 604 dbSNP
rs1205948608 611 dbSNP
rs1212079851 615 dbSNP
rs1320331727 620 dbSNP
rs1258917736 625 dbSNP
rs973275823 634 dbSNP
rs867607520 643 dbSNP
rs933622372 651 dbSNP
rs963294388 663 dbSNP
rs900864834 664 dbSNP
rs1337185954 669 dbSNP
rs1276556948 670 dbSNP
rs1186299679 673 dbSNP
rs1391620934 687 dbSNP
rs1042679000 692 dbSNP
rs138367783 692 dbSNP
rs945353531 702 dbSNP
rs910484218 703 dbSNP
rs985902556 718 dbSNP
rs915071136 720 dbSNP
rs546393498 722 dbSNP
rs954570455 725 dbSNP
rs1323257080 741 dbSNP
rs989280569 747 dbSNP
rs185904349 753 dbSNP
rs977232363 760 dbSNP
rs17110474 762 dbSNP
rs17365681 764 dbSNP
rs1229289170 766 dbSNP
rs1283693057 784 dbSNP
rs1354284937 789 dbSNP
rs1229968085 797 dbSNP
rs1011821679 799 dbSNP
rs1465487946 818 dbSNP
rs758706206 823 dbSNP
rs894699559 830 dbSNP
rs1464322101 839 dbSNP
rs982233982 843 dbSNP
rs1174833101 846 dbSNP
rs1249552674 850 dbSNP
rs1465050505 854 dbSNP
rs1478615106 857 dbSNP
rs971115064 863 dbSNP
rs1034604586 880 dbSNP
rs370180224 885 dbSNP
rs1235247632 888 dbSNP
rs1473460377 892 dbSNP
rs1026351657 900 dbSNP
rs1003009928 901 dbSNP
rs112007255 908 dbSNP
rs1047589765 921 dbSNP
rs750671284 922 dbSNP
rs1391223930 925 dbSNP
rs181587906 932 dbSNP
rs898477057 933 dbSNP
rs1338794187 938 dbSNP
rs1038305198 939 dbSNP
rs1450284061 943 dbSNP
rs1016472566 944 dbSNP
rs77952848 947 dbSNP
rs1226401059 949 dbSNP
rs1269809648 952 dbSNP
rs1329553884 954 dbSNP
rs1198179404 960 dbSNP
rs1276051516 962 dbSNP
rs1435867251 971 dbSNP
rs1280420199 972 dbSNP
rs1258882384 976 dbSNP
rs1472562829 978 dbSNP
rs189622347 984 dbSNP
rs1414654190 985 dbSNP
rs528508562 987 dbSNP
rs1344287629 993 dbSNP
rs1172277628 1009 dbSNP
rs574756020 1023 dbSNP
rs1400333817 1026 dbSNP
rs1301124897 1028 dbSNP
rs1241775311 1034 dbSNP
rs559752612 1035 dbSNP
rs986017743 1041 dbSNP
rs1308096926 1045 dbSNP
rs1349898521 1061 dbSNP
rs1407955340 1071 dbSNP
rs997970178 1073 dbSNP
rs933141527 1074 dbSNP
rs542634251 1079 dbSNP
rs900832435 1081 dbSNP
rs574112942 1087 dbSNP
rs777548271 1089 dbSNP
rs945045789 1093 dbSNP
rs184860055 1094 dbSNP
rs532940489 1104 dbSNP
rs1481746062 1105 dbSNP
rs937800415 1111 dbSNP
rs1172298349 1116 dbSNP
rs1254580589 1119 dbSNP
rs926474558 1126 dbSNP
rs1198564137 1132 dbSNP
rs982599390 1139 dbSNP
rs1479141770 1142 dbSNP
rs967180992 1142 dbSNP
rs1021396389 1144 dbSNP
rs1441636908 1145 dbSNP
rs1370034123 1146 dbSNP
rs1427888255 1147 dbSNP
rs1309847082 1150 dbSNP
rs1371055049 1153 dbSNP
rs949528047 1154 dbSNP
rs376476404 1158 dbSNP
rs989777460 1161 dbSNP
rs1233523631 1166 dbSNP
rs575050106 1174 dbSNP
rs1296341135 1176 dbSNP
rs1178289545 1189 dbSNP
rs1339532788 1190 dbSNP
rs1229972582 1193 dbSNP
rs1277450667 1196 dbSNP
rs972057936 1197 dbSNP
rs1265745994 1204 dbSNP
rs758227884 1213 dbSNP
rs1431927501 1214 dbSNP
rs1194565068 1236 dbSNP
rs1389775443 1236 dbSNP
rs1447777075 1237 dbSNP
rs1170539908 1238 dbSNP
rs1373665606 1248 dbSNP
rs1457370455 1255 dbSNP
rs1291643428 1257 dbSNP
rs958369361 1260 dbSNP
rs1387126786 1261 dbSNP
rs986369525 1271 dbSNP
rs564267526 1273 dbSNP
rs1034594746 1282 dbSNP
rs953534061 1285 dbSNP
rs1297724691 1290 dbSNP
rs1003168553 1291 dbSNP
rs1320550488 1299 dbSNP
rs1030533134 1303 dbSNP
rs180984722 1317 dbSNP
rs527592292 1317 dbSNP
rs1200714205 1320 dbSNP
rs558439666 1326 dbSNP
rs1441631370 1332 dbSNP
rs1021129824 1336 dbSNP
rs1278182807 1347 dbSNP
rs1463729622 1350 dbSNP
rs1190707081 1367 dbSNP
rs1262516894 1371 dbSNP
rs1025841475 1373 dbSNP
rs1009205723 1375 dbSNP
rs994757924 1376 dbSNP
rs1162662126 1380 dbSNP
rs898557793 1381 dbSNP
rs1461806817 1383 dbSNP
rs1158124569 1389 dbSNP
rs1284636567 1390 dbSNP
rs1436871439 1393 dbSNP
rs893492783 1401 dbSNP
rs1320731614 1404 dbSNP
rs1221551333 1406 dbSNP
rs1380941225 1416 dbSNP
rs1377829477 1418 dbSNP
rs1393780211 1422 dbSNP
rs1053682849 1423 dbSNP
rs1342759538 1424 dbSNP
rs1234383442 1428 dbSNP
rs1038418006 1441 dbSNP
rs1327430294 1442 dbSNP
rs942669305 1443 dbSNP
rs1210834943 1451 dbSNP
rs1261513343 1455 dbSNP
rs889818202 1459 dbSNP
rs1449288812 1464 dbSNP
rs1180162046 1465 dbSNP
rs377749591 1465 dbSNP
rs905026685 1466 dbSNP
rs1475509374 1471 dbSNP
rs1046192939 1477 dbSNP
rs1311594257 1479 dbSNP
rs1050301573 1493 dbSNP
rs1422010456 1495 dbSNP
rs1159456551 1503 dbSNP
rs949251854 1513 dbSNP
rs1361269242 1514 dbSNP
rs1464146444 1535 dbSNP
rs919321521 1536 dbSNP
rs1375478797 1554 dbSNP
rs1415937709 1556 dbSNP
rs933274449 1559 dbSNP
rs1349078990 1561 dbSNP
rs1230614525 1563 dbSNP
rs148255328 1572 dbSNP
rs1416317735 1573 dbSNP
rs977251790 1573 dbSNP
rs1182654964 1575 dbSNP
rs945887645 1581 dbSNP
rs7545970 1583 dbSNP
rs1257869708 1587 dbSNP
rs989934733 1591 dbSNP
rs986338259 1593 dbSNP
rs958359516 1594 dbSNP
rs1255056490 1602 dbSNP
rs953669748 1603 dbSNP
rs752517154 1607 dbSNP
rs75264901 1612 dbSNP
rs971645634 1629 dbSNP
rs535858127 1634 dbSNP
rs567397420 1643 dbSNP
rs550402350 1653 dbSNP
rs1488548656 1658 dbSNP
rs1285180939 1667 dbSNP
rs1026335031 1669 dbSNP
rs994309620 1670 dbSNP
rs967961948 1676 dbSNP
rs761963162 1679 dbSNP
rs373381330 1681 dbSNP
rs573335113 1687 dbSNP
rs1428519473 1688 dbSNP
rs537649510 1693 dbSNP
rs1369216322 1695 dbSNP
rs962858300 1702 dbSNP
rs1444880411 1710 dbSNP
rs1299124725 1711 dbSNP
rs1020677107 1721 dbSNP
rs189346736 1722 dbSNP
rs1016965203 1723 dbSNP
rs1009340936 1727 dbSNP
rs1290165062 1731 dbSNP
rs1227315108 1735 dbSNP
rs1348765319 1736 dbSNP
rs1227761548 1738 dbSNP
rs113989801 1741 dbSNP
rs889765991 1745 dbSNP
rs1205084058 1746 dbSNP
rs1291761463 1746 dbSNP
rs371329512 1749 dbSNP
rs776725500 1750 dbSNP
rs1341727216 1751 dbSNP
rs905078978 1758 dbSNP
rs149547790 1759 dbSNP
rs1391431242 1761 dbSNP
rs1412165144 1763 dbSNP
rs138091296 1764 dbSNP
rs1349679331 1769 dbSNP
rs1434748237 1774 dbSNP
rs1328256020 1777 dbSNP
rs1351635220 1785 dbSNP
rs1434580528 1787 dbSNP
rs897677997 1789 dbSNP
rs1036436271 1794 dbSNP
rs549398977 1796 dbSNP
rs1165757452 1797 dbSNP
rs1319773189 1800 dbSNP
rs78289722 1804 dbSNP
rs867521223 1805 dbSNP
rs1415425296 1815 dbSNP
rs563806614 1816 dbSNP
rs772415480 1823 dbSNP
rs1464181725 1827 dbSNP
rs1186240887 1829 dbSNP
rs914449925 1835 dbSNP
rs111718385 1836 dbSNP
rs1475423742 1837 dbSNP
rs1478023377 1838 dbSNP
rs1169057752 1839 dbSNP
rs1413701229 1841 dbSNP
rs1403994664 1846 dbSNP
rs1167578633 1854 dbSNP
rs1050346739 1856 dbSNP
rs1456918835 1863 dbSNP
rs1318719256 1868 dbSNP
rs1261022652 1869 dbSNP
rs1328332225 1873 dbSNP
rs1431562347 1875 dbSNP
rs931991828 1876 dbSNP
rs937103105 1884 dbSNP
rs184849684 1889 dbSNP
rs1246739614 1890 dbSNP
rs1206457579 1892 dbSNP
rs1285898451 1893 dbSNP
rs946215811 1895 dbSNP
rs981108056 1897 dbSNP
rs575113325 1900 dbSNP
rs1237462635 1903 dbSNP
rs971474495 1904 dbSNP
rs56212819 1905 dbSNP
rs1259557972 1908 dbSNP
rs987888546 1920 dbSNP
rs546773533 1921 dbSNP
rs962848435 1922 dbSNP
rs1017081138 1924 dbSNP
rs1006913924 1925 dbSNP
rs544783364 1931 dbSNP
rs1030177656 1932 dbSNP
rs998156675 1935 dbSNP
rs1369861093 1936 dbSNP
rs902548104 1942 dbSNP
rs1226343055 1950 dbSNP
rs1294138910 1954 dbSNP
rs1280970703 1956 dbSNP
rs768772184 1959 dbSNP
rs1440236033 1960 dbSNP
rs1199485272 1966 dbSNP
rs1392639614 1967 dbSNP
rs938030045 1984 dbSNP
rs969479504 1985 dbSNP
rs1010595941 1990 dbSNP
rs1372221715 1991 dbSNP
rs1438027478 1992 dbSNP
rs892963743 1995 dbSNP
rs1054263793 2000 dbSNP
rs773959518 2001 dbSNP
rs766551252 2002 dbSNP
rs1434785193 2005 dbSNP
rs770472280 2007 dbSNP
rs1172147917 2008 dbSNP
rs540063884 2017 dbSNP
rs1014750542 2019 dbSNP
rs1313479337 2027 dbSNP
rs1006012670 2042 dbSNP
rs192839086 2044 dbSNP
rs141191364 2045 dbSNP
rs1330665873 2051 dbSNP
rs931959149 2051 dbSNP
rs1481169273 2059 dbSNP
rs1251069581 2071 dbSNP
rs901862642 2076 dbSNP
rs187395263 2081 dbSNP
rs1040614591 2086 dbSNP
rs946322709 2087 dbSNP
rs1314517030 2095 dbSNP
rs913490078 2096 dbSNP
rs7555773 2104 dbSNP
rs1233736805 2105 dbSNP
rs1198496277 2108 dbSNP
rs1253110814 2108 dbSNP
rs941642783 2113 dbSNP
rs1251373919 2122 dbSNP
rs1368801571 2123 dbSNP
rs990285891 2127 dbSNP
rs1174319889 2128 dbSNP
rs1389583400 2131 dbSNP
rs910147524 2141 dbSNP
rs1311745162 2152 dbSNP
rs768108810 2153 dbSNP
rs1386001774 2154 dbSNP
rs925001999 2157 dbSNP
rs1296282628 2159 dbSNP
rs954213416 2163 dbSNP
rs12140555 2164 dbSNP
rs770006795 2167 dbSNP
rs184511518 2170 dbSNP
rs1339363294 2174 dbSNP
rs781189323 2182 dbSNP
rs1225898325 2183 dbSNP
rs977281161 2185 dbSNP
rs1025096703 2186 dbSNP
rs551185882 2188 dbSNP
rs992087476 2189 dbSNP
rs1271563711 2195 dbSNP
rs1178901865 2196 dbSNP
rs1418102128 2200 dbSNP
rs966717522 2207 dbSNP
rs1021402728 2209 dbSNP
rs962231247 2210 dbSNP
rs1175890783 2211 dbSNP
rs1010927425 2215 dbSNP
rs1195320165 2216 dbSNP
rs1373536836 2218 dbSNP
rs1457261057 2220 dbSNP
rs1162553398 2221 dbSNP
rs1461646126 2224 dbSNP
rs1319402552 2226 dbSNP
rs1014801513 2230 dbSNP
rs1383409577 2231 dbSNP
rs146582542 2232 dbSNP
rs1327514093 2233 dbSNP
rs887629671 2233 dbSNP
rs1337328936 2235 dbSNP
rs531128748 2238 dbSNP
rs1029013927 2239 dbSNP
rs747148155 2239 dbSNP
rs1484955079 2247 dbSNP
rs1210710606 2258 dbSNP
rs1206950011 2263 dbSNP
rs1262457711 2265 dbSNP
rs1423205126 2270 dbSNP
rs893037667 2273 dbSNP
rs61768863 2277 dbSNP
rs1475406286 2279 dbSNP
rs1158050113 2305 dbSNP
rs1343042452 2313 dbSNP
rs1288189538 2330 dbSNP
rs1288968291 2341 dbSNP
rs1400827861 2351 dbSNP
rs1395965244 2360 dbSNP
rs1291961078 2362 dbSNP
rs946078507 2363 dbSNP
rs1357827810 2364 dbSNP
rs1234245782 2365 dbSNP
rs1288013140 2366 dbSNP
rs1315375451 2367 dbSNP
rs1241401696 2368 dbSNP
rs1001336357 2370 dbSNP
rs1482935493 2371 dbSNP
rs900603006 2377 dbSNP
rs936137451 2384 dbSNP
rs927474406 2387 dbSNP
rs905724744 2388 dbSNP
rs368885478 2400 dbSNP
rs1405464354 2409 dbSNP
rs535221250 2410 dbSNP
rs947835488 2415 dbSNP
rs917677704 2418 dbSNP
rs949860609 2419 dbSNP
rs34083930 2423 dbSNP
rs566410229 2429 dbSNP
rs1311708893 2430 dbSNP
rs961749004 2447 dbSNP
rs1037076347 2448 dbSNP
rs907772359 2450 dbSNP
rs984694231 2453 dbSNP
rs1371543956 2455 dbSNP
rs750724271 2461 dbSNP
rs779300341 2473 dbSNP
rs1311749537 2476 dbSNP
rs985684133 2477 dbSNP
rs932820646 2485 dbSNP
rs1348536705 2486 dbSNP
rs966494681 2488 dbSNP
rs1361760901 2491 dbSNP
rs922785884 2497 dbSNP
rs150438664 2506 dbSNP
rs967168722 2514 dbSNP
rs1204306396 2523 dbSNP
rs1166398852 2534 dbSNP
rs1019044761 2536 dbSNP
rs1266187608 2537 dbSNP
rs529298019 2541 dbSNP
rs1174993483 2542 dbSNP
rs891827201 2551 dbSNP
rs1435886498 2552 dbSNP
rs569916758 2553 dbSNP
rs1187889578 2579 dbSNP
rs375771582 2596 dbSNP
rs1299001461 2597 dbSNP
rs1370499174 2598 dbSNP
rs989444126 2600 dbSNP
rs1305764372 2601 dbSNP
rs1265932177 2611 dbSNP
rs1371738799 2624 dbSNP
rs779168779 2635 dbSNP
rs1000484855 2639 dbSNP
rs1309078293 2644 dbSNP
rs1204923882 2646 dbSNP
rs958034588 2649 dbSNP
rs1350033925 2651 dbSNP
rs1259201331 2656 dbSNP
rs1195039122 2665 dbSNP
rs1466882288 2665 dbSNP
rs906028232 2669 dbSNP
rs1448333545 2674 dbSNP
rs1417957287 2677 dbSNP
rs769085136 2677 dbSNP
rs1335274976 2679 dbSNP
rs1171588673 2680 dbSNP
rs1032922310 2685 dbSNP
rs1394158250 2692 dbSNP
rs757464629 2693 dbSNP
rs1001489782 2697 dbSNP
rs1412677455 2706 dbSNP
rs1342338150 2707 dbSNP
rs549886454 2709 dbSNP
rs1371896168 2715 dbSNP
rs1430063208 2716 dbSNP
rs905675387 2724 dbSNP
rs1364012325 2727 dbSNP
rs1044920849 2728 dbSNP
rs1298730686 2730 dbSNP
rs950253677 2732 dbSNP
rs1381172844 2747 dbSNP
rs917629435 2748 dbSNP
rs1464083368 2752 dbSNP
rs1056233980 2754 dbSNP
rs533280391 2755 dbSNP
rs907573258 2758 dbSNP
rs1416682567 2762 dbSNP
rs1417613095 2765 dbSNP
rs1474425421 2766 dbSNP
rs753873017 2767 dbSNP
rs1400287805 2781 dbSNP
rs896873930 2782 dbSNP
rs1316348118 2795 dbSNP
rs192019501 2796 dbSNP
rs1005140848 2802 dbSNP
rs1312183649 2805 dbSNP
rs1426480906 2809 dbSNP
rs921862967 2812 dbSNP
rs1194450416 2813 dbSNP
rs888145269 2818 dbSNP
rs1049950303 2831 dbSNP
rs1349534450 2834 dbSNP
rs932925922 2835 dbSNP
rs922891462 2836 dbSNP
rs544845669 2843 dbSNP
rs187861452 2850 dbSNP
rs559605007 2856 dbSNP
rs764179130 2865 dbSNP
rs1484922112 2867 dbSNP
rs372276772 2869 dbSNP
rs761147252 2874 dbSNP
rs1469818879 2876 dbSNP
rs906080449 2876 dbSNP
rs753240194 2881 dbSNP
rs1319721053 2882 dbSNP
rs1044665066 2886 dbSNP
rs1226551362 2888 dbSNP
rs1324193788 2894 dbSNP
rs1014813928 2898 dbSNP
rs1373535411 2902 dbSNP
rs1416491856 2906 dbSNP
rs113684322 2912 dbSNP
rs1334886980 2915 dbSNP
rs1056602755 2920 dbSNP
rs980000113 2930 dbSNP
rs1280915904 2938 dbSNP
rs547631828 2944 dbSNP
rs1277505582 2951 dbSNP
rs1323459017 2957 dbSNP
rs1346375630 2961 dbSNP
rs1213556173 2973 dbSNP
rs1460220489 2978 dbSNP
rs1437597592 2986 dbSNP
rs1180010115 2992 dbSNP
rs1048669823 2993 dbSNP
rs1470582241 3001 dbSNP
rs556708536 3006 dbSNP
rs930327332 3010 dbSNP
rs754524762 3011 dbSNP
rs1169034678 3012 dbSNP
rs1174124373 3034 dbSNP
rs921822799 3038 dbSNP
rs1407998779 3039 dbSNP
rs1024244049 3041 dbSNP
rs1336001999 3048 dbSNP
rs1475347889 3053 dbSNP
rs1371825465 3059 dbSNP
rs1014464467 3060 dbSNP
rs961243229 3071 dbSNP
rs1300626788 3076 dbSNP
rs1372465468 3082 dbSNP
rs1015288781 3087 dbSNP
rs1257091073 3089 dbSNP
rs974712181 3090 dbSNP
rs1005283268 3094 dbSNP
rs1275496208 3109 dbSNP
rs911764432 3121 dbSNP
rs1252673249 3126 dbSNP
rs1211984123 3128 dbSNP
rs1018862404 3135 dbSNP
rs1455634931 3135 dbSNP
rs1273388056 3136 dbSNP
rs1199581541 3137 dbSNP
rs1372401602 3139 dbSNP
rs888101016 3145 dbSNP
rs1460355216 3147 dbSNP
rs774645572 3168 dbSNP
rs1396860265 3170 dbSNP
rs1460605578 3182 dbSNP
rs1194990185 3185 dbSNP
rs1337409986 3186 dbSNP
rs996544174 3187 dbSNP
rs543424527 3188 dbSNP
rs901385030 3189 dbSNP
rs1041310058 3209 dbSNP
rs1276536910 3215 dbSNP
rs1225826762 3221 dbSNP
rs945530673 3224 dbSNP
rs1318967374 3233 dbSNP
rs1213369457 3234 dbSNP
rs1271506490 3234 dbSNP
rs1234455363 3239 dbSNP
rs1210490738 3241 dbSNP
rs914113701 3245 dbSNP
rs1053851177 3248 dbSNP
rs1426662773 3258 dbSNP
rs1195164705 3262 dbSNP
rs1369534000 3266 dbSNP
rs151312092 3269 dbSNP
rs908706206 3270 dbSNP
rs926705040 3271 dbSNP
rs200145065 3285 dbSNP
rs1162395981 3286 dbSNP
rs1419542766 3286 dbSNP
rs77534448 3286 dbSNP
rs978728907 3286 dbSNP
rs1382058807 3287 dbSNP
rs141421533 3287 dbSNP
rs536879084 3287 dbSNP
rs761713239 3287 dbSNP
rs766513734 3287 dbSNP
rs61768862 3289 dbSNP
rs142755328 3290 dbSNP
rs35532023 3290 dbSNP
rs746392935 3290 dbSNP
rs757444775 3290 dbSNP
rs763082003 3290 dbSNP
rs1291720835 3291 dbSNP
rs1337261743 3291 dbSNP
rs1330033831 3292 dbSNP
rs1409719502 3297 dbSNP
rs1395049878 3298 dbSNP
rs183930691 3302 dbSNP
rs970065248 3314 dbSNP
rs1260230795 3319 dbSNP
rs753083280 3322 dbSNP
rs1263773405 3328 dbSNP
rs557881816 3334 dbSNP
rs115060446 3335 dbSNP
rs917119544 3343 dbSNP
rs566100047 3353 dbSNP
rs992793014 3356 dbSNP
rs772609480 3374 dbSNP
rs1015411631 3376 dbSNP
rs1157843763 3378 dbSNP
rs1441827942 3380 dbSNP
rs1361622502 3383 dbSNP
rs1015801330 3387 dbSNP
rs1161018784 3388 dbSNP
rs1004338319 3393 dbSNP
rs1361714156 3393 dbSNP
rs1233633470 3394 dbSNP
rs556041823 3397 dbSNP
rs1435850157 3400 dbSNP
rs535745817 3402 dbSNP
rs1028033940 3405 dbSNP
rs1802168 3407 dbSNP
rs545565613 3410 dbSNP
rs1347100240 3411 dbSNP
rs900197009 3422 dbSNP
rs1259372490 3424 dbSNP
rs1483448175 3429 dbSNP
rs549798627 3430 dbSNP
rs1247945224 3436 dbSNP
rs1420410923 3437 dbSNP
rs1277515331 3439 dbSNP
rs1178742543 3440 dbSNP
rs1241659353 3447 dbSNP
rs900872784 3448 dbSNP
rs1373657222 3451 dbSNP
rs533147940 3454 dbSNP
rs1009843597 3455 dbSNP
rs944679797 3465 dbSNP
rs1334292208 3466 dbSNP
rs1361327245 3467 dbSNP
rs1466845328 3469 dbSNP
rs565724873 3477 dbSNP
rs911801547 3490 dbSNP
rs892623063 3495 dbSNP
rs988609838 3509 dbSNP
rs1449224877 3515 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site 3'UTR
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions Prostate Tissue
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRX1760597. RNA binding protein: AGO2. Condition:AGO-CLIP-LNCaP_C ...

- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.).

Article - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al.
- Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000370645.4 | 3UTR | UAACACAUGUGCCAUAAUAUACAAACUUCUACUUUCGUCAGUCCUUAACAUCUACCUCUCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
BLCA 0.549 0.01 0.373 0.06 18 Click to see details
PAAD 0.917 0.04 0.800 0.1 4 Click to see details
STAD -0.301 0.05 -0.257 0.08 32 Click to see details
ESCA -0.516 0.05 -0.400 0.11 11 Click to see details
LUSC 0.249 0.07 0.272 0.05 38 Click to see details
PRAD -0.203 0.08 -0.109 0.23 50 Click to see details
HNSC -0.221 0.08 -0.207 0.09 42 Click to see details
CHOL 0.49 0.09 0.300 0.22 9 Click to see details
THCA 0.106 0.21 0.095 0.24 59 Click to see details
KIRP -0.087 0.32 0.001 0.5 32 Click to see details
LUAD 0.119 0.36 -0.007 0.49 12 Click to see details
KICH 0.07 0.37 -0.065 0.38 25 Click to see details
COAD -0.127 0.38 -0.048 0.46 8 Click to see details
CESC 0.356 0.38 0.500 0.33 3 Click to see details
UCEC 0.065 0.4 0.112 0.32 19 Click to see details
LIHC -0.038 0.4 -0.013 0.46 49 Click to see details
KIRC 0.007 0.48 0.036 0.39 68 Click to see details
PCPG -0.07 0.48 -0.500 0.33 3 Click to see details
BRCA 0.005 0.48 -0.067 0.27 84 Click to see details
BRCA 0.005 0.48 -0.067 0.27 84 Click to see details
BRCA 0.005 0.48 -0.067 0.27 84 Click to see details
581 hsa-let-7e-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT002081 HMGA2 high mobility group AT-hook 2 5 5
MIRT003932 EIF3J eukaryotic translation initiation factor 3 subunit J 2 1
MIRT004469 SMC1A structural maintenance of chromosomes 1A 4 7
MIRT005718 WNT1 Wnt family member 1 4 1
MIRT006122 CCND1 cyclin D1 5 4
MIRT006404 MPL MPL proto-oncogene, thrombopoietin receptor 1 1
MIRT032098 RABGAP1L RAB GTPase activating protein 1 like 1 1
MIRT032099 DAD1 defender against cell death 1 1 1
MIRT032100 MYCN MYCN proto-oncogene, bHLH transcription factor 4 2
MIRT051413 WDR67 TBC1 domain family member 31 1 1
MIRT051414 FAM219B family with sequence similarity 219 member B 1 1
MIRT051415 C11orf91 chromosome 11 open reading frame 91 1 1
MIRT051416 CENPP centromere protein P 1 1
MIRT051417 TMEM107 transmembrane protein 107 1 1
MIRT051418 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT051419 DAAM1 dishevelled associated activator of morphogenesis 1 1 1
MIRT051420 DGCR8 DGCR8, microprocessor complex subunit 1 1
MIRT051421 RAP1A RAP1A, member of RAS oncogene family 1 1
MIRT051422 RPA1 replication protein A1 1 1
MIRT051423 SKIV2L Ski2 like RNA helicase 1 1
MIRT051424 AGO1 argonaute 1, RISC catalytic component 4 2
MIRT051425 RPS27 ribosomal protein S27 1 1
MIRT051426 ARNT2 aryl hydrocarbon receptor nuclear translocator 2 1 1
MIRT051427 GPM6B glycoprotein M6B 1 1
MIRT051428 TTLL12 tubulin tyrosine ligase like 12 1 1
MIRT051429 HIST2H2BF histone cluster 2 H2B family member f 1 1
MIRT051430 CELF2 CUGBP Elav-like family member 2 1 1
MIRT051431 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT051432 VPS13D vacuolar protein sorting 13 homolog D 1 1
MIRT051433 RPL10 ribosomal protein L10 1 1
MIRT051434 SPCS2 signal peptidase complex subunit 2 1 1
MIRT051435 DCAF8 DDB1 and CUL4 associated factor 8 1 1
MIRT051436 CTC1 CST telomere replication complex component 1 1 1
MIRT051437 NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit 1 1
MIRT051438 PHF3 PHD finger protein 3 1 1
MIRT051439 TUBA1B tubulin alpha 1b 1 1
MIRT051440 SHANK1 SH3 and multiple ankyrin repeat domains 1 1 1
MIRT051441 SKA2 spindle and kinetochore associated complex subunit 2 1 1
MIRT051442 SPTBN1 spectrin beta, non-erythrocytic 1 1 1
MIRT051443 ND2 MTND2 1 1
MIRT051444 MED13L mediator complex subunit 13 like 1 1
MIRT051445 RCOR3 REST corepressor 3 1 1
MIRT051446 MACF1 microtubule-actin crosslinking factor 1 1 1
MIRT051447 RDX radixin 2 5
MIRT051448 PCBP2 poly(rC) binding protein 2 1 1
MIRT051449 UBAP2L ubiquitin associated protein 2 like 1 1
MIRT051450 CDCA3 cell division cycle associated 3 1 1
MIRT051451 CABLES1 Cdk5 and Abl enzyme substrate 1 1 1
MIRT051452 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 1
MIRT051453 C12orf49 chromosome 12 open reading frame 49 1 1
MIRT051454 TIMP3 TIMP metallopeptidase inhibitor 3 1 1
MIRT051455 WBSCR16 RCC1 like 1 1
MIRT051456 SLC2A11 solute carrier family 2 member 11 1 1
MIRT051457 NF1 neurofibromin 1 1 1
MIRT051458 LRRC8A leucine rich repeat containing 8 VRAC subunit A 1 1
MIRT051459 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT051460 DTNB dystrobrevin beta 1 1
MIRT051461 SCMH1 Scm polycomb group protein homolog 1 1 1
MIRT051462 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT051463 RHBDD2 rhomboid domain containing 2 1 1
MIRT051464 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT051465 NDST1 N-deacetylase and N-sulfotransferase 1 1 1
MIRT051466 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 5
MIRT051467 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT051468 BAHCC1 BAH domain and coiled-coil containing 1 1 1
MIRT051469 CARM1 coactivator associated arginine methyltransferase 1 1 1
MIRT051470 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT051471 ND3 NADH dehydrogenase, subunit 3 (complex I) 1 1
MIRT051472 PIGS phosphatidylinositol glycan anchor biosynthesis class S 1 1
MIRT051473 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT051474 RPN2 ribophorin II 1 1
MIRT051475 RPL12 ribosomal protein L12 1 1
MIRT051476 NME4 NME/NM23 nucleoside diphosphate kinase 4 1 1
MIRT051477 IVD isovaleryl-CoA dehydrogenase 1 1
MIRT051478 JAZF1 JAZF zinc finger 1 1 1
MIRT051479 ND4 NADH dehydrogenase, subunit 4 (complex I) 1 1
MIRT051480 VARS valyl-tRNA synthetase 1 1
MIRT051481 RNF26 ring finger protein 26 1 1
MIRT051482 LHFPL2 LHFPL tetraspan subfamily member 2 1 1
MIRT051483 ARCN1 archain 1 1 1
MIRT051484 COX1 cytochrome c oxidase subunit I 1 1
MIRT051485 SLC12A4 solute carrier family 12 member 4 1 1
MIRT051486 AEBP2 AE binding protein 2 1 1
MIRT051487 PET112 glutamyl-tRNA amidotransferase subunit B 1 1
MIRT051488 UROC1 urocanate hydratase 1 1 1
MIRT051489 IGF1R insulin like growth factor 1 receptor 5 10
MIRT051490 BSDC1 BSD domain containing 1 1 1
MIRT051491 PTK2 protein tyrosine kinase 2 1 1
MIRT051492 CDC5L cell division cycle 5 like 1 1
MIRT051493 EN2 engrailed homeobox 2 1 1
MIRT051494 SSB Sjogren syndrome antigen B 1 1
MIRT051495 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT051496 RRAGC Ras related GTP binding C 1 1
MIRT051497 ZNF236 zinc finger protein 236 1 1
MIRT051498 SEMA4B semaphorin 4B 1 1
MIRT051499 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT051500 XIAP X-linked inhibitor of apoptosis 1 1
MIRT051501 GTF2I general transcription factor IIi 1 1
MIRT051502 JMJD1C jumonji domain containing 1C 1 1
MIRT051503 OTUD5 OTU deubiquitinase 5 1 1
MIRT051504 NOLC1 nucleolar and coiled-body phosphoprotein 1 1 1
MIRT051505 PPIG peptidylprolyl isomerase G 1 1
MIRT051506 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT051507 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 1 1
MIRT051508 VAMP2 vesicle associated membrane protein 2 1 1
MIRT051509 LSR lipolysis stimulated lipoprotein receptor 1 1
MIRT051510 KIAA0355 KIAA0355 1 1
MIRT051511 RPSA ribosomal protein SA 1 1
MIRT051512 DCAF6 DDB1 and CUL4 associated factor 6 1 1
MIRT051513 UHRF1BP1 UHRF1 binding protein 1 1 1
MIRT051514 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 1 1
MIRT051515 PIGP phosphatidylinositol glycan anchor biosynthesis class P 1 1
MIRT051516 LMLN leishmanolysin like peptidase 1 1
MIRT051517 PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 1 1
MIRT051518 HIPK1 homeodomain interacting protein kinase 1 1 1
MIRT051519 SERF2 small EDRK-rich factor 2 1 1
MIRT051520 RBM4 RNA binding motif protein 4 1 1
MIRT051521 RBM14 RNA binding motif protein 14 1 1
MIRT051522 HMGB1 high mobility group box 1 1 1
MIRT051523 GMPS guanine monophosphate synthase 1 1
MIRT051524 DIAPH1 diaphanous related formin 1 1 1
MIRT051525 STAM signal transducing adaptor molecule 1 1
MIRT051526 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT051527 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 1 1
MIRT051528 MARCH5 membrane associated ring-CH-type finger 5 1 1
MIRT051529 SQLE squalene epoxidase 1 1
MIRT051530 TIMM50 translocase of inner mitochondrial membrane 50 1 1
MIRT051531 NDUFA3 NADH:ubiquinone oxidoreductase subunit A3 1 1
MIRT051532 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 1 1
MIRT051533 NRSN2 neurensin 2 1 1
MIRT051534 SALL1 spalt like transcription factor 1 1 1
MIRT051535 COX3 cytochrome c oxidase III 1 1
MIRT051536 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT051537 SUPT4H1 SPT4 homolog, DSIF elongation factor subunit 1 1
MIRT051538 PACS2 phosphofurin acidic cluster sorting protein 2 1 1
MIRT051539 MTMR14 myotubularin related protein 14 1 1
MIRT051540 LUZP1 leucine zipper protein 1 1 1
MIRT051541 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT051542 SUZ12 SUZ12 polycomb repressive complex 2 subunit 1 1
MIRT051543 PAPD4 poly(A) RNA polymerase D4, non-canonical 1 1
MIRT051544 QSOX1 quiescin sulfhydryl oxidase 1 1 1
MIRT051545 SPATA13 spermatogenesis associated 13 1 1
MIRT051546 DHX57 DExH-box helicase 57 1 1
MIRT051547 KATNB1 katanin regulatory subunit B1 1 1
MIRT051548 COL6A1 collagen type VI alpha 1 chain 1 1
MIRT051549 DHX15 DEAH-box helicase 15 1 1
MIRT051550 MTCH2 mitochondrial carrier 2 1 1
MIRT051551 KIAA0100 KIAA0100 1 1
MIRT051552 SUGP2 SURP and G-patch domain containing 2 1 1
MIRT051553 NCLN nicalin 1 1
MIRT051554 ATXN2L ataxin 2 like 1 1
MIRT051555 CHD9 chromodomain helicase DNA binding protein 9 1 1
MIRT051556 PES1 pescadillo ribosomal biogenesis factor 1 1 1
MIRT051557 NUP155 nucleoporin 155 2 7
MIRT051558 GNG5 G protein subunit gamma 5 2 3
MIRT051559 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT051560 MTFR1 mitochondrial fission regulator 1 1 1
MIRT051561 IRS2 insulin receptor substrate 2 2 1
MIRT051562 IRS4 insulin receptor substrate 4 1 1
MIRT051563 PPP1R10 protein phosphatase 1 regulatory subunit 10 1 1
MIRT051564 ZNF284 zinc finger protein 284 1 1
MIRT051565 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 1 1
MIRT051566 SCD stearoyl-CoA desaturase 1 1
MIRT051567 FDPS farnesyl diphosphate synthase 1 1
MIRT051568 KRBOX4 KRAB box domain containing 4 1 1
MIRT051569 BRI3 brain protein I3 1 1
MIRT051570 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT051571 PYCR1 pyrroline-5-carboxylate reductase 1 1 1
MIRT051572 SMAP2 small ArfGAP2 1 1
MIRT051573 WDFY3 WD repeat and FYVE domain containing 3 1 1
MIRT051574 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT051575 SRSF2 serine and arginine rich splicing factor 2 1 1
MIRT051576 PGD phosphogluconate dehydrogenase 1 1
MIRT051577 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT051578 ZNF652 zinc finger protein 652 1 1
MIRT051579 PSMA6 proteasome subunit alpha 6 1 1
MIRT051580 SLC38A2 solute carrier family 38 member 2 1 1
MIRT051581 LRRC41 leucine rich repeat containing 41 1 1
MIRT051582 RANBP2 RAN binding protein 2 1 1
MIRT051583 SVIL supervillin 1 1
MIRT051584 CCNG1 cyclin G1 1 1
MIRT051585 ZNF256 zinc finger protein 256 1 1
MIRT051586 COPG1 coatomer protein complex subunit gamma 1 1 1
MIRT051587 PDCD11 programmed cell death 11 1 1
MIRT051588 CNBP CCHC-type zinc finger nucleic acid binding protein 1 1
MIRT051589 USP37 ubiquitin specific peptidase 37 1 1
MIRT051590 UBE2V2 ubiquitin conjugating enzyme E2 V2 1 1
MIRT051591 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT051592 LMNA lamin A/C 1 1
MIRT051593 STAT3 signal transducer and activator of transcription 3 1 1
MIRT051594 TRPV1 transient receptor potential cation channel subfamily V member 1 1 1
MIRT051595 MATR3 matrin 3 1 1
MIRT051596 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 1
MIRT051597 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 1 1
MIRT051598 WDR48 WD repeat domain 48 1 1
MIRT051599 RBM8A RNA binding motif protein 8A 1 1
MIRT051600 SCYL1 SCY1 like pseudokinase 1 1 1
MIRT051601 C19orf48 chromosome 19 open reading frame 48 1 1
MIRT051602 FOXD4L6 forkhead box D4 like 6 1 1
MIRT051603 PIGN phosphatidylinositol glycan anchor biosynthesis class N 1 1
MIRT051604 SPCS3 signal peptidase complex subunit 3 1 1
MIRT051605 TNFAIP1 TNF alpha induced protein 1 1 1
MIRT051606 MS4A10 membrane spanning 4-domains A10 1 1
MIRT051607 MSMO1 methylsterol monooxygenase 1 1 1
MIRT051608 ARID1A AT-rich interaction domain 1A 1 1
MIRT051609 NCKIPSD NCK interacting protein with SH3 domain 2 5
MIRT051610 NCBP1 nuclear cap binding protein subunit 1 1 1
MIRT051611 COX16 COX16, cytochrome c oxidase assembly homolog 1 1
MIRT051612 NUDT8 nudix hydrolase 8 1 1
MIRT051613 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT051614 TXNRD1 thioredoxin reductase 1 1 1
MIRT051615 ELMSAN1 ELM2 and Myb/SANT domain containing 1 1 1
MIRT051616 CTSA cathepsin A 1 1
MIRT051617 PRRC2A proline rich coiled-coil 2A 1 1
MIRT051618 SPAG9 sperm associated antigen 9 1 1
MIRT051619 AGMAT agmatinase 1 1
MIRT051620 NCKAP5L NCK associated protein 5 like 1 1
MIRT051621 ZFP62 ZFP62 zinc finger protein 1 1
MIRT051622 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1 1
MIRT051623 POLR3D RNA polymerase III subunit D 2 3
MIRT051624 PRPF8 pre-mRNA processing factor 8 1 1
MIRT051625 ATP6 ATP synthase F0 subunit 6 1 1
MIRT051626 ZFAND5 zinc finger AN1-type containing 5 1 1
MIRT051627 BAZ1B bromodomain adjacent to zinc finger domain 1B 1 1
MIRT051628 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT051629 BMP2K BMP2 inducible kinase 1 1
MIRT051630 SPN sialophorin 1 1
MIRT051631 PA2G4 proliferation-associated 2G4 1 1
MIRT051632 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 1
MIRT051633 TUBB4B tubulin beta 4B class IVb 1 1
MIRT051634 TRRAP transformation/transcription domain associated protein 1 1
MIRT051635 SLCO4A1 solute carrier organic anion transporter family member 4A1 1 1
MIRT051636 CCRN4L nocturnin 1 1
MIRT051637 USE1 unconventional SNARE in the ER 1 1 1
MIRT051638 STARD7 StAR related lipid transfer domain containing 7 1 1
MIRT051639 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 3
MIRT051640 CLTC clathrin heavy chain 1 1
MIRT051641 TERF1 telomeric repeat binding factor 1 1 1
MIRT051642 PAX3 paired box 3 1 1
MIRT051643 CCDC97 coiled-coil domain containing 97 1 1
MIRT051644 HLA-C major histocompatibility complex, class I, C 1 1
MIRT051645 GTPBP8 GTP binding protein 8 (putative) 1 1
MIRT051646 VGLL4 vestigial like family member 4 1 1
MIRT051647 ANKRD40 ankyrin repeat domain 40 1 1
MIRT051648 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 1 1
MIRT051649 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT051650 DSP desmoplakin 1 1
MIRT051651 UBN2 ubinuclein 2 1 1
MIRT051652 ZNF805 zinc finger protein 805 1 1
MIRT051653 RBBP4 RB binding protein 4, chromatin remodeling factor 1 1
MIRT051654 OCLN occludin 1 1
MIRT051655 CBX5 chromobox 5 2 3
MIRT051656 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT051657 MKI67 marker of proliferation Ki-67 1 1
MIRT051658 SUB1 SUB1 homolog, transcriptional regulator 1 1
MIRT051659 RSL1D1 ribosomal L1 domain containing 1 1 1
MIRT051660 SEC23IP SEC23 interacting protein 1 1
MIRT051661 RNMT RNA guanine-7 methyltransferase 1 1
MIRT051662 SGSM3 small G protein signaling modulator 3 1 1
MIRT051663 ZFP3 ZFP3 zinc finger protein 1 1
MIRT051664 GLUL glutamate-ammonia ligase 1 1
MIRT051665 POLD1 DNA polymerase delta 1, catalytic subunit 1 1
MIRT051666 WDR4 WD repeat domain 4 1 1
MIRT051667 PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 1 1
MIRT051668 RAI2 retinoic acid induced 2 1 1
MIRT051669 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 1 1
MIRT051670 UTP15 UTP15, small subunit processome component 1 1
MIRT051671 THADA THADA, armadillo repeat containing 1 1
MIRT051672 ZNF451 zinc finger protein 451 1 1
MIRT051673 CREBBP CREB binding protein 1 1
MIRT051674 ZNF770 zinc finger protein 770 1 1
MIRT051675 CLDN4 claudin 4 1 1
MIRT051676 ZKSCAN7 zinc finger with KRAB and SCAN domains 7 1 1
MIRT051677 NICN1 nicolin 1 1 1
MIRT051678 RPLP2 ribosomal protein lateral stalk subunit P2 1 1
MIRT051679 DCBLD2 discoidin, CUB and LCCL domain containing 2 1 1
MIRT051680 IRGQ immunity related GTPase Q 1 1
MIRT051681 CA5B carbonic anhydrase 5B 1 1
MIRT051682 COX14 COX14, cytochrome c oxidase assembly factor 1 1
MIRT051683 PSD3 pleckstrin and Sec7 domain containing 3 1 1
MIRT051684 RPL27A ribosomal protein L27a 1 1
MIRT051685 CWC15 CWC15 spliceosome associated protein homolog 1 1
MIRT051686 NT5DC2 5'-nucleotidase domain containing 2 1 1
MIRT051687 OR7D2 olfactory receptor family 7 subfamily D member 2 1 1
MIRT051688 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 1 1
MIRT051689 NUDT15 nudix hydrolase 15 1 1
MIRT051690 CDH18 cadherin 18 1 1
MIRT051691 FAM160B1 family with sequence similarity 160 member B1 1 1
MIRT051692 DZIP1 DAZ interacting zinc finger protein 1 1 1
MIRT051693 TDRD7 tudor domain containing 7 1 1
MIRT051694 TCF4 transcription factor 4 1 1
MIRT051695 ENSA endosulfine alpha 1 1
MIRT051696 GTF3C1 general transcription factor IIIC subunit 1 1 1
MIRT051697 TNFRSF1A TNF receptor superfamily member 1A 1 1
MIRT051698 CCDC113 coiled-coil domain containing 113 1 1
MIRT051699 MYO9B myosin IXB 1 1
MIRT051700 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 1 1
MIRT051701 PRAMEF13 PRAME family member 13 1 1
MIRT051702 PMPCA peptidase, mitochondrial processing alpha subunit 2 5
MIRT051703 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT051704 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT051705 CCDC106 coiled-coil domain containing 106 1 1
MIRT051706 CYP2B6 cytochrome P450 family 2 subfamily B member 6 1 1
MIRT051707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 3
MIRT051708 PSME4 proteasome activator subunit 4 1 1
MIRT051709 SETD1A SET domain containing 1A 1 1
MIRT054561 MMP9 matrix metallopeptidase 9 3 1
MIRT054579 IGF1 insulin like growth factor 1 3 1
MIRT063195 ADIPOR2 adiponectin receptor 2 2 2
MIRT065687 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT067399 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT068154 TXLNA taxilin alpha 2 2
MIRT068528 NHLRC3 NHL repeat containing 3 2 6
MIRT068789 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT073006 ARID3B AT-rich interaction domain 3B 2 6
MIRT076223 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT077616 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT080398 ONECUT2 one cut homeobox 2 2 2
MIRT083300 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT084976 BACH1 BTB domain and CNC homolog 1 2 2
MIRT094160 PCGF3 polycomb group ring finger 3 2 6
MIRT094460 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT095766 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT100094 ABT1 activator of basal transcription 1 2 8
MIRT112242 MDM4 MDM4, p53 regulator 2 4
MIRT118586 STK4 serine/threonine kinase 4 2 2
MIRT120921 PDE12 phosphodiesterase 12 2 8
MIRT123317 CALU calumenin 2 2
MIRT152272 TNFSF9 TNF superfamily member 9 2 2
MIRT153847 NCOA3 nuclear receptor coactivator 3 2 2
MIRT168583 HMGA1 high mobility group AT-hook 1 2 4
MIRT180603 CRY2 cryptochrome circadian clock 2 2 2
MIRT187717 SUOX sulfite oxidase 2 2
MIRT191404 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT193101 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT215720 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT218815 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT240330 UBXN2B UBX domain protein 2B 2 2
MIRT243473 TRIM71 tripartite motif containing 71 2 2
MIRT244069 EDN1 endothelin 1 2 2
MIRT252330 SALL3 spalt like transcription factor 3 2 2
MIRT255314 CDV3 CDV3 homolog 2 2
MIRT259277 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT259479 TXLNG taxilin gamma 2 2
MIRT260707 CLDN12 claudin 12 2 6
MIRT264693 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT266212 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT266626 CHTOP chromatin target of PRMT1 2 2
MIRT268839 C1ORF21 chromosome 1 open reading frame 21 2 2
MIRT294446 ZNF264 zinc finger protein 264 2 2
MIRT297013 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT297443 SLC20A1 solute carrier family 20 member 1 2 4
MIRT300037 BZW1 basic leucine zipper and W2 domains 1 2 4
MIRT300893 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT303320 MXD1 MAX dimerization protein 1 2 2
MIRT309846 NAT8L N-acetyltransferase 8 like 2 2
MIRT322428 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT324731 ACER2 alkaline ceramidase 2 2 2
MIRT402057 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437395 LIN28A lin-28 homolog A 4 1
MIRT437396 AURKB aurora kinase B 4 1
MIRT437435 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 1
MIRT438632 TNFRSF10B TNF receptor superfamily member 10b 2 1
MIRT439135 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT442020 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT445658 ATP6V1G1 ATPase H+ transporting V1 subunit G1 2 6
MIRT447136 KIF27 kinesin family member 27 2 2
MIRT448259 ZNF774 zinc finger protein 774 2 2
MIRT449005 ANKRD46 ankyrin repeat domain 46 2 2
MIRT449953 FMNL3 formin like 3 2 2
MIRT451155 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451624 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451693 C1RL complement C1r subcomponent like 2 2
MIRT452092 NUCB2 nucleobindin 2 2 2
MIRT452431 QDPR quinoid dihydropteridine reductase 2 2
MIRT452943 DISC1 disrupted in schizophrenia 1 2 2
MIRT453401 RHD Rh blood group D antigen 2 6
MIRT454164 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT454280 FXN frataxin 2 2
MIRT454539 RABL2A RAB, member of RAS oncogene family like 2A 2 2
MIRT454854 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455676 GLO1 glyoxalase I 2 2
MIRT457248 RABL2B RAB, member of RAS oncogene family like 2B 2 2
MIRT457677 ZNF587 zinc finger protein 587 2 2
MIRT457887 THEM6 thioesterase superfamily member 6 2 4
MIRT458016 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458279 FUT10 fucosyltransferase 10 2 2
MIRT459736 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT460453 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460500 FAM105A family with sequence similarity 105 member A 2 6
MIRT460938 NOA1 nitric oxide associated 1 2 4
MIRT461092 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461169 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461364 COL8A1 collagen type VIII alpha 1 chain 2 2
MIRT462382 YAE1D1 Yae1 domain containing 1 2 2
MIRT462780 ZNF8 zinc finger protein 8 2 2
MIRT463420 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463662 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT464265 VCL vinculin 2 2
MIRT465122 TSC22D2 TSC22 domain family member 2 2 4
MIRT466184 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466722 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT469102 RNF144B ring finger protein 144B 2 2
MIRT469714 RAB40C RAB40C, member RAS oncogene family 2 2
MIRT470425 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT470679 POLR2D RNA polymerase II subunit D 2 4
MIRT470861 PLXND1 plexin D1 2 2
MIRT471271 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471957 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472672 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 2 2
MIRT472739 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473134 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT473234 SMCR7L mitochondrial elongation factor 1 1 4
MIRT473828 MAP2K7 mitogen-activated protein kinase kinase 7 2 2
MIRT473940 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT474022 LRRC20 leucine rich repeat containing 20 2 2
MIRT474502 KLHDC8B kelch domain containing 8B 2 2
MIRT474766 KIAA0930 KIAA0930 2 2
MIRT474905 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT475331 IFNLR1 interferon lambda receptor 1 2 2
MIRT475379 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT475733 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT476548 GABPB1 GA binding protein transcription factor beta subunit 1 2 4
MIRT476973 FAM83G family with sequence similarity 83 member G 2 4
MIRT477534 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 2 4
MIRT477682 EFHD2 EF-hand domain family member D2 2 2
MIRT481201 ATXN7L3B ataxin 7 like 3B 2 4
MIRT481241 ATXN7L3 ataxin 7 like 3 2 2
MIRT481363 ATG9A autophagy related 9A 2 2
MIRT481388 ATG12 autophagy related 12 2 2
MIRT481652 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT481851 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT482184 AHR aryl hydrocarbon receptor 2 2
MIRT482220 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT485296 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT486659 ZNF28 zinc finger protein 28 2 2
MIRT489413 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491867 ZBTB5 zinc finger and BTB domain containing 5 2 8
MIRT492216 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492626 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT493323 LIMD2 LIM domain containing 2 2 2
MIRT493901 FAM43A family with sequence similarity 43 member A 2 4
MIRT494263 CEP120 centrosomal protein 120 2 2
MIRT494687 ARID3A AT-rich interaction domain 3A 2 2
MIRT495968 TBC1D19 TBC1 domain family member 19 2 2
MIRT496111 SNX17 sorting nexin 17 2 2
MIRT497875 SLC12A7 solute carrier family 12 member 7 2 2
MIRT498122 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT499405 PLCG2 phospholipase C gamma 2 2 4
MIRT499493 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 2
MIRT499653 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 2 2
MIRT499942 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT499997 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT500819 THBS1 thrombospondin 1 2 3
MIRT500902 STRN striatin 2 4
MIRT501118 SLC5A6 solute carrier family 5 member 6 2 4
MIRT501173 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT501241 SEMA4C semaphorin 4C 2 6
MIRT501328 RNFT1 ring finger protein, transmembrane 1 2 2
MIRT501355 RNF44 ring finger protein 44 2 4
MIRT501387 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT501441 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT501759 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501943 MBD2 methyl-CpG binding domain protein 2 2 8
MIRT502106 KPNA5 karyopherin subunit alpha 5 2 8
MIRT502130 KMT2D lysine methyltransferase 2D 2 4
MIRT502784 CEP135 centrosomal protein 135 2 2
MIRT502845 CELF1 CUGBP Elav-like family member 1 2 2
MIRT504789 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT505017 ZNF644 zinc finger protein 644 2 2
MIRT506942 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT507252 FIGN fidgetin, microtubule severing factor 2 8
MIRT507694 COIL coilin 2 6
MIRT508401 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508665 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT508932 AK4 adenylate kinase 4 2 4
MIRT510395 ZNF566 zinc finger protein 566 2 6
MIRT510518 YOD1 YOD1 deubiquitinase 2 6
MIRT511386 IKZF3 IKAROS family zinc finger 3 2 4
MIRT512745 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT515954 C9orf156 tRNA methyltransferase O 2 2
MIRT516083 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT523619 FZD9 frizzled class receptor 9 2 4
MIRT523733 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523990 DVL3 dishevelled segment polarity protein 3 2 2
MIRT524113 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT525727 SOD2 superoxide dismutase 2 2 2
MIRT527763 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT529727 OPRL1 opioid related nociceptin receptor 1 2 2
MIRT533187 WASL Wiskott-Aldrich syndrome like 2 6
MIRT536378 LEFTY1 left-right determination factor 1 2 2
MIRT543785 RBM12B RNA binding motif protein 12B 2 4
MIRT543868 SLC16A9 solute carrier family 16 member 9 2 2
MIRT545387 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545890 ZNF200 zinc finger protein 200 2 4
MIRT546334 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547373 MSI2 musashi RNA binding protein 2 2 2
MIRT547579 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548264 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT548351 EPHA4 EPH receptor A4 2 2
MIRT548534 DUSP1 dual specificity phosphatase 1 2 2
MIRT548560 DNAL1 dynein axonemal light chain 1 2 2
MIRT548779 COLEC12 collectin subfamily member 12 2 2
MIRT548978 CCNT2 cyclin T2 2 2
MIRT549208 BEND4 BEN domain containing 4 2 4
MIRT549763 ZNF611 zinc finger protein 611 2 6
MIRT549799 KIAA0391 KIAA0391 2 2
MIRT549847 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 2
MIRT550898 ACTA1 actin, alpha 1, skeletal muscle 2 2
MIRT551283 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551318 GSG2 histone H3 associated protein kinase 2 6
MIRT551932 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552003 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT552410 ZNF460 zinc finger protein 460 2 4
MIRT553013 USP38 ubiquitin specific peptidase 38 2 2
MIRT555550 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT555711 PDZD8 PDZ domain containing 8 2 2
MIRT557372 HAND1 heart and neural crest derivatives expressed 1 2 2
MIRT557960 FAM222B family with sequence similarity 222 member B 2 2
MIRT559087 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559497 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT561772 PEG10 paternally expressed 10 2 2
MIRT564402 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT565443 SURF4 surfeit 4 2 2
MIRT566518 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT567715 E2F6 E2F transcription factor 6 2 2
MIRT568655 ABHD17C abhydrolase domain containing 17C 2 2
MIRT569498 THYN1 thymocyte nuclear protein 1 2 2
MIRT573820 TGOLN2 trans-golgi network protein 2 2 2
MIRT574363 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT574750 GOLGA4 golgin A4 2 2
MIRT574788 FAM104A family with sequence similarity 104 member A 2 2
MIRT576089 Poteg POTE ankyrin domain family, member G 2 2
MIRT576812 Thbs1 thrombospondin 1 2 3
MIRT616370 RWDD1 RWD domain containing 1 2 2
MIRT617851 FMO4 flavin containing monooxygenase 4 2 2
MIRT642394 ZNF556 zinc finger protein 556 2 2
MIRT680519 PRIM2 DNA primase subunit 2 2 2
MIRT680547 ZNF584 zinc finger protein 584 2 2
MIRT680800 ZNF578 zinc finger protein 578 2 2
MIRT680838 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT681141 INTS7 integrator complex subunit 7 2 2
MIRT681271 RFC2 replication factor C subunit 2 2 2
MIRT681323 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT681359 BRI3BP BRI3 binding protein 2 2
MIRT681506 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681536 ZNF738 zinc finger protein 738 2 2
MIRT681658 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT681738 RAB19 RAB19, member RAS oncogene family 2 4
MIRT681797 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681869 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT681941 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682102 ITGA3 integrin subunit alpha 3 2 4
MIRT682181 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682238 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682384 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682444 MTX3 metaxin 3 2 2
MIRT682604 CPA4 carboxypeptidase A4 2 2
MIRT682640 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT689327 FPR1 formyl peptide receptor 1 2 2
MIRT689730 ATXN2 ataxin 2 2 2
MIRT691036 ZNF799 zinc finger protein 799 2 2
MIRT691935 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT694884 ZNF417 zinc finger protein 417 2 2
MIRT695255 ZNF443 zinc finger protein 443 2 2
MIRT695413 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT700589 PRSS22 protease, serine 22 2 2
MIRT701428 NHLRC2 NHL repeat containing 2 2 2
MIRT702484 KIAA1328 KIAA1328 2 2
MIRT702715 IPO9 importin 9 2 2
MIRT704028 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT704418 CTPS1 CTP synthase 1 2 2
MIRT705750 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT712373 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT713520 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT731263 FASLG Fas ligand 3 1
MIRT732697 Ccr7 chemokine (C-C motif) receptor 7 2 0
MIRT732700 Snhg12 small nucleolar RNA host gene 12 2 0
MIRT734626 SYT7 synaptotagmin 7 1 0
MIRT755829 UBQLN4 ubiquilin 4 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
let-7e Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
let-7e Hydroxamic acid HDACi LAQ824 NULL NULL Microarray breast cancer cell line SKBr3 16452179 2006 down-regulated
let-7e Doxorubicin approved 31703 Microarray ovarian cancer 19237188 2009 up-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
let-7e Etoposide approved 36462 Microarray Normal human fibroblasts (AG01522) 19633716 2009 up-regulated
let-7e Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
let-7e 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 down-regulated
let-7e Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
let-7e Marine fungal metabolite 1386A NULL NULL Microarray MCF-7 breast cancer cells. 22159329 2012 down-regulated
let-7e Ginsenoside Rh2 NULL 119307 Microarray NSCLC cell line A549 23152132 2013 down-regulated
let-7e 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) NULL 16078949 Microarray hepatocytes 23107762 2013 up-regulated
let-7e Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Doxorubicin 31703 NSC123127 approved resistant High Ovarian Cancer cell line (OV19, TOV21G, TOV112D, FUOV1, C13, OV2008, A2780CP, A2780S, IGROV1, T8, OVCAR5, IMCC3, A2008, OVCAR3, SKOV3, IOSER)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Tongue Squamous Cell Carcinoma cell line (Tca8113)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant High Colon Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer tissue and cell line (A2780)
hsa-let-7e Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Vincristine 5978 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive High Lung Adenocarcinoma cell line (A549)
hsa-let-7e Imatinib 5291 NSC743414 approved resistant High Gastrointestinal Stromal Tumor tissue
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Adenocarcinoma cell line (OE19)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer tissue and cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780, HO8910, ES2, CAOV3, SKOV3)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive Low Colorectal Cancer cell line (HCT-8)
hsa-let-7e Daunorubicin 30323 NSC82151 approved resistant High Acute Promyelocytic Leukemia cell line (HL60)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7C)
hsa-let-7e Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (PC-9)
hsa-let-7e Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Regorafenib 11167602 NSC763932 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-let-7e Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-let-7e 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-let-7e Ethanol+Tamoxifen resistant cell line (LY2)
hsa-let-7e Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-let-7e Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-let-7e Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-let-7e Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-let-7e Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-let-7e Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-let-7e-5p Alvocidib 5287969 NSC649890 resistant
hsa-let-7e-5p Ethyl, methoxy, prodigisine 135829283 NSC742418 resistant
hsa-let-7e-5p Platinum 23939 resistant Low Ovarian Cancer tissue
hsa-let-7e-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (AsPC-1)
hsa-let-7e-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-let-7e-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-let-7e-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-let-7e-5p Sunitinib 5329102 NSC750690 approved sensitive tissue (clear cell renal cell carcinoma)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-let-7e-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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