pre-miRNA Information
pre-miRNA hsa-let-7e   
Genomic Coordinates chr19: 51692786 - 51692864
Synonyms MIRNLET7E, hsa-let-7e, let-7e, MIRLET7E
Description Homo sapiens let-7e stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7e-5p
Sequence 8| UGAGGUAGGAGGUUGUAUAGUU |29
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1189776118 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CRK   
Synonyms CRKII, p38
Description CRK proto-oncogene, adaptor protein
Transcript NM_005206   
Other Transcripts NM_016823   
Expression
Putative miRNA Targets on CRK
3'UTR of CRK
(miRNA target sites are highlighted)
>CRK|NM_005206|3'UTR
   1 GCTGGTAAAGGTTACGAAGATTAATGTGAGTGGTCAGTGGGAAGGGGAGTGTAATGGCAAACGAGGTCACTTCCCATTCA
  81 CACATGTCCGTCTGCTGGATCAACAGAATCCCGATGAGGACTTCAGCTGAGTATAGTTCAACAGTTTTGCTGACAGATGG
 161 GAACAATCTTTTTTTTTTTTTTCCAACTGCCATCTATACAATTTTCTTACAGATGTCAAAAGCAGTCTAGTTTATATAAG
 241 CATTCTGTTACCTGTGATATTTTTTAGACTGAACTGCTCCATTCCTAGTCTTAATTACCATATTCAGGGTACGAACTGGA
 321 GGGCTTGTGTGTTAGCTTCTGAATTGGCAATTGGAGGCGGTAGTGGTCGTGCCTGTGTGTATCAGAAGGGATAGGTATCT
 401 TGCCTCCTTTCTCTCAGGCAGTGCAAATCACCCTGTGGAAAACCGATGGACAGGAAGGAGTGTTACACACTGCTTACCCT
 481 GATTTATTCAGTGGTTTTGTTTTCATTCTGGAACCATACTATCAAATGGCGACAGACTGTTCCGTTCCACCCCCGTGAAG
 561 TAATCATGCACCGTGTGAATAGTATCAAGCAGGATTGCTTTCATTGTATGGAGCATGACCAGCGTGTGACTCATTCTGAC
 641 ATTTCAGATCCTAAGAATTCTAAGAACACTACTAGAAGCATTTGTTCCCTCCTAGTCAATGCTTCATACTTTTTCTTGGG
 721 ATTCTTTTAGCCCTTGACATTCTTGTCCCCCAAACCTGTAAGTAGGTGAATTCCTAAGATAAGTGTGTATTTTCATTCCA
 801 GGTGAAAAGCAGGATGTACCGAGCACTTTATTCAGTGCATAGCTTTAAGCCAGTGTTGGATTCACTAAGTGGACAGCCAG
 881 TCTCCCAGCTCTCTGCCTTCCCCAAAAGGGTCGTAGTAGGTCACCCTTCTACAGCAGCTAACTAGAGTCCTAACTAATGG
 961 GATCCAGCAGGGCCATTTCTCCAGAGGGCCAGTATCCTATTAGGAGACTCTTGGAATTCTTAGGTTCTACTCAAGAGTGG
1041 AAGGACCAATCACCTCTGATATTCTGTGGAAGGTTTTGGGGTCAAATTCTGCCCTCTGCATTCTGTGCAACTTGTATAAA
1121 AGTCAAGTTAGTATTACATGAATTTGGGGTAGGGTTAGTGCTTTGAAAAAATGTTGAACCGGCTGGGCGCGGTGGCTCAC
1201 GTCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATAG
1281 TGAAACCCCATCTCTGCTAAAGATATAAAAAATTAGCCCGGCGTGGTGGTGCACGCCTGTAATCCCAGCTACTCGGGAGG
1361 CTGAGGCAGGAGAATTGCTTCAACCTGGGAGGTGGAGGCTGCAGTGAGCCGAGATCGCACCACTGCGTTCCAGCCTGAGC
1441 GACAGGGCAAGACTCAGTCTCAAAAAAAAAAAAAAGGAAAAAAAAAAGAAAAAAAAATGTTGAACCAATTGTGAATTACT
1521 TATGTATTATTCATTTCTCATGGGGAGAGTAATGCTGTTGAAGAACATTACATTGTAAACTGCCTTCATTTTTGGCTCTT
1601 TGTTTATGTTCAGGTTTAGTTTACAAACCCATTTAAGTATGGAATGATTTATATGGGGTCAGGTGCTCCACAAAATAGAC
1681 CTATGAGACCAAAAATGACCTAGGCTATTTAGACGACAGCATGAAACTTCCACGTTAGTTCTCAGTCTATAAAGGCACTT
1761 ACCGGTCTCTGGTGTGGTATGACCAATAGAAACACCTTATAGTTTGCTTTGGACCTCATTTTGGAAAAATAATCTGCCTT
1841 TCTAATTGTTCTGCATAGGTTAAAATGATAAATTTACATTCTTTGAACCTATACCAGATTGTGGTGTCCGAGTGACCGGC
1921 ACACTGTCTGACACACAGTCAGTGTGCACGTATTTGTCTGAGTGAATGAGGAGACCTGAGAAACCGGTGACGTGGCACAG
2001 GGAAGCCAGCTGGCCCAGGATTCCGTACATGGCCGCAAGCAGACTAACGCGTTGACGCTAATTTAATGTATTTTACCTCA
2081 CACTAAGGTCATGCTTGATAAAGACGTTAAACTCAACTTGTAAAATGGTAGCCCAGTGCTATGCACAGAGTGGGTGCTCA
2161 TTAGTGTTGAATGAACACATTTGTAATACTACATGTAATTCCATCTGACTGCTTTGTTAAATTTTCAGTTAGAACGTAGA
2241 TACTGTAAAGTCCACACACACATTAAATCTTGTTTTCCTGAAAGTATGGC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uuGA-UAUGUU--GGAGGAUGGAGu 5'
            || || :||  : |::|||||| 
Target 5' cgCTAATTTAATGTATTTTACCTCa 3'
2056 - 2080 138.00 -12.90
2
miRNA  3' uuGAUAUGUU----GGAGGAUGGAgu 5'
            :||||:||    :|| :|||||  
Target 5' gtTTATATAAGCATTCTGTTACCTgt 3'
230 - 255 130.00 -12.00
3
miRNA  3' uugaUAUGUUGGAGGAUGGAGu 5'
              ||| ::: ||:|:|||| 
Target 5' agggATA-GGTATCTTGCCTCc 3'
387 - 407 125.00 -12.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM6002415 15 COSMIC
COSM472319 22 COSMIC
COSM2154432 65 COSMIC
COSM2154431 67 COSMIC
COSM2154448 68 COSMIC
COSM2154449 69 COSMIC
COSM2154447 70 COSMIC
COSM2154419 71 COSMIC
COSM8071170 74 COSMIC
COSM9205317 88 COSMIC
COSM4748490 98 COSMIC
COSM9205316 111 COSMIC
COSM8864295 124 COSMIC
COSN30518664 156 COSMIC
COSN32076785 156 COSMIC
COSN30505834 159 COSMIC
COSN30513410 166 COSMIC
COSN30490379 167 COSMIC
COSN20113238 168 COSMIC
COSN2375351 169 COSMIC
COSN2526112 169 COSMIC
COSN27410174 169 COSMIC
COSN19666227 182 COSMIC
COSN2375350 183 COSMIC
COSN30483745 227 COSMIC
COSN30483637 228 COSMIC
COSN31553920 277 COSMIC
COSN18741203 291 COSMIC
COSN31543852 312 COSMIC
COSN31556525 530 COSMIC
COSN31521564 554 COSMIC
COSN31565630 572 COSMIC
COSN31961260 702 COSMIC
COSN30174444 705 COSMIC
COSN31542882 741 COSMIC
COSN1193137 975 COSMIC
COSN31484560 981 COSMIC
COSN24282965 1137 COSMIC
COSN30541376 1191 COSMIC
COSN15244265 1199 COSMIC
COSN24731964 1272 COSMIC
COSN6650935 1319 COSMIC
COSN15016792 1320 COSMIC
COSN20172636 1416 COSMIC
COSN24733021 1478 COSMIC
COSN20254887 1556 COSMIC
COSN6650932 1640 COSMIC
COSN25500017 1657 COSMIC
COSN32093385 1914 COSMIC
COSN1713842 2065 COSMIC
COSN32061477 2346 COSMIC
COSN6650930 2520 COSMIC
COSN7160222 2748 COSMIC
COSN16178840 2816 COSMIC
COSN25753958 2938 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs149078123 1 dbSNP
rs1460550029 5 dbSNP
rs954838481 15 dbSNP
rs1363339648 16 dbSNP
rs145094200 23 dbSNP
rs778437493 34 dbSNP
rs1260863082 41 dbSNP
rs1398231816 45 dbSNP
rs756685839 46 dbSNP
rs748279653 51 dbSNP
rs781401346 54 dbSNP
rs755037548 56 dbSNP
rs751763519 57 dbSNP
rs766559218 63 dbSNP
rs758145321 67 dbSNP
rs1257672960 70 dbSNP
rs750209037 79 dbSNP
rs1477228518 80 dbSNP
rs746234297 85 dbSNP
rs765221724 89 dbSNP
rs761704148 90 dbSNP
rs1421174730 93 dbSNP
rs963953252 98 dbSNP
rs371718957 103 dbSNP
rs1278918643 108 dbSNP
rs150365260 112 dbSNP
rs140388019 113 dbSNP
rs368713980 115 dbSNP
rs775008230 116 dbSNP
rs146555797 126 dbSNP
rs941775690 131 dbSNP
rs566945238 132 dbSNP
rs184468514 134 dbSNP
rs770473405 139 dbSNP
rs1215557190 141 dbSNP
rs1279976408 148 dbSNP
rs1346359886 150 dbSNP
rs1047371163 152 dbSNP
rs748688807 154 dbSNP
rs1213726332 155 dbSNP
rs200149433 156 dbSNP
rs768626621 158 dbSNP
rs1445964605 159 dbSNP
rs747056266 161 dbSNP
rs373966581 164 dbSNP
rs758645482 166 dbSNP
rs1429345418 167 dbSNP
rs1177697204 168 dbSNP
rs1431087124 169 dbSNP
rs750255685 171 dbSNP
rs1475497584 173 dbSNP
rs1190932500 180 dbSNP
rs1192783499 182 dbSNP
rs1053352628 183 dbSNP
rs1400218021 183 dbSNP
rs1455421736 183 dbSNP
rs748614587 183 dbSNP
rs76288901 183 dbSNP
rs879010836 183 dbSNP
rs1404923337 184 dbSNP
rs934622580 185 dbSNP
rs181367214 186 dbSNP
rs1436016668 189 dbSNP
rs770442138 190 dbSNP
rs1302945520 201 dbSNP
rs925841263 204 dbSNP
rs1042719379 210 dbSNP
rs1381252538 210 dbSNP
rs1350535925 215 dbSNP
rs539335232 216 dbSNP
rs1202856963 217 dbSNP
rs1285672874 226 dbSNP
rs572039367 231 dbSNP
rs1447061857 236 dbSNP
rs1169051537 240 dbSNP
rs993453070 246 dbSNP
rs774655954 257 dbSNP
rs927439949 259 dbSNP
rs1465400679 261 dbSNP
rs865958835 269 dbSNP
rs980213749 274 dbSNP
rs61762271 281 dbSNP
rs763413960 301 dbSNP
rs1022105711 303 dbSNP
rs1366207030 306 dbSNP
rs1010251621 307 dbSNP
rs987221924 311 dbSNP
rs1457807292 312 dbSNP
rs954605335 313 dbSNP
rs1392493485 322 dbSNP
rs956201147 324 dbSNP
rs1335697978 331 dbSNP
rs1030250216 335 dbSNP
rs1258147912 344 dbSNP
rs1237594337 351 dbSNP
rs1196599353 353 dbSNP
rs866943333 359 dbSNP
rs535495662 361 dbSNP
rs963680821 363 dbSNP
rs1469503219 367 dbSNP
rs568498802 369 dbSNP
rs62089594 371 dbSNP
rs1016496590 372 dbSNP
rs1283699697 388 dbSNP
rs1038828685 397 dbSNP
rs773708842 404 dbSNP
rs1472971330 406 dbSNP
rs1164249756 407 dbSNP
rs1458508657 413 dbSNP
rs1334948566 415 dbSNP
rs1005948880 421 dbSNP
rs1463154622 424 dbSNP
rs887551495 426 dbSNP
rs112872338 443 dbSNP
rs142954537 444 dbSNP
rs1351591661 445 dbSNP
rs772889848 447 dbSNP
rs188661552 449 dbSNP
rs1803325 458 dbSNP
rs1365037314 459 dbSNP
rs1290835238 461 dbSNP
rs1256651070 465 dbSNP
rs1235528828 466 dbSNP
rs1245141834 470 dbSNP
rs1443455965 470 dbSNP
rs1240932131 479 dbSNP
rs1057417032 495 dbSNP
rs938903940 498 dbSNP
rs552838131 499 dbSNP
rs1052980209 504 dbSNP
rs999068831 505 dbSNP
rs1337259462 507 dbSNP
rs148981564 509 dbSNP
rs904450239 510 dbSNP
rs748666755 515 dbSNP
rs1042917623 516 dbSNP
rs943289044 517 dbSNP
rs1187322468 518 dbSNP
rs560643359 530 dbSNP
rs1051366750 531 dbSNP
rs933109348 538 dbSNP
rs927470947 543 dbSNP
rs547330797 544 dbSNP
rs1203316432 550 dbSNP
rs528886850 554 dbSNP
rs776046824 555 dbSNP
rs1304024513 559 dbSNP
rs1464128051 572 dbSNP
rs968845920 573 dbSNP
rs914669826 574 dbSNP
rs1324277618 580 dbSNP
rs545009461 582 dbSNP
rs1376679932 583 dbSNP
rs376063689 585 dbSNP
rs1241028661 589 dbSNP
rs1275007187 589 dbSNP
rs1346861332 594 dbSNP
rs145797873 597 dbSNP
rs909466388 603 dbSNP
rs1441219416 607 dbSNP
rs1486725166 611 dbSNP
rs1201065121 612 dbSNP
rs543105398 613 dbSNP
rs1041975 615 dbSNP
rs575769654 620 dbSNP
rs997417944 623 dbSNP
rs183931575 624 dbSNP
rs1041976 626 dbSNP
rs1017448687 630 dbSNP
rs1466132165 632 dbSNP
rs1006021017 638 dbSNP
rs1382340426 667 dbSNP
rs533245864 669 dbSNP
rs1026064199 671 dbSNP
rs1370026263 678 dbSNP
rs149908866 679 dbSNP
rs757982646 696 dbSNP
rs1305569757 701 dbSNP
rs1202198019 709 dbSNP
rs1234064626 715 dbSNP
rs139110929 716 dbSNP
rs553789646 718 dbSNP
rs535791681 721 dbSNP
rs1021407302 724 dbSNP
rs1056127030 733 dbSNP
rs192161161 736 dbSNP
rs1468357922 738 dbSNP
rs1192099282 740 dbSNP
rs556560428 741 dbSNP
rs58414824 742 dbSNP
rs61762272 746 dbSNP
rs889014687 747 dbSNP
rs147372165 750 dbSNP
rs1454860401 753 dbSNP
rs1306796969 756 dbSNP
rs1320865025 764 dbSNP
rs932952106 773 dbSNP
rs552774877 779 dbSNP
rs1368236066 783 dbSNP
rs1284011715 784 dbSNP
rs914722352 785 dbSNP
rs988944771 788 dbSNP
rs534402802 789 dbSNP
rs757222327 792 dbSNP
rs35409499 800 dbSNP
rs1230278609 815 dbSNP
rs909413913 820 dbSNP
rs567108669 821 dbSNP
rs189061840 828 dbSNP
rs980920754 830 dbSNP
rs530466005 835 dbSNP
rs1248877171 843 dbSNP
rs34970553 852 dbSNP
rs1489007203 853 dbSNP
rs540777039 854 dbSNP
rs573408956 874 dbSNP
rs1217894999 876 dbSNP
rs769067758 877 dbSNP
rs185435497 884 dbSNP
rs1159214121 885 dbSNP
rs1416728244 889 dbSNP
rs1459497087 898 dbSNP
rs1026555241 903 dbSNP
rs1350323554 910 dbSNP
rs549397331 913 dbSNP
rs1296431903 934 dbSNP
rs1436791979 941 dbSNP
rs1375380969 942 dbSNP
rs1411745587 944 dbSNP
rs766776261 946 dbSNP
rs1034740012 956 dbSNP
rs1354884893 960 dbSNP
rs193240256 961 dbSNP
rs749555955 967 dbSNP
rs1292251585 974 dbSNP
rs1322746267 975 dbSNP
rs1295867145 988 dbSNP
rs1418531022 994 dbSNP
rs979959950 1001 dbSNP
rs1161180900 1012 dbSNP
rs1484286147 1013 dbSNP
rs1412625030 1015 dbSNP
rs968092968 1019 dbSNP
rs1256265722 1045 dbSNP
rs763255570 1046 dbSNP
rs879545008 1049 dbSNP
rs1183280348 1052 dbSNP
rs1414042858 1062 dbSNP
rs1409179801 1066 dbSNP
rs1424206282 1081 dbSNP
rs563856294 1098 dbSNP
rs1044708391 1100 dbSNP
rs1356219476 1107 dbSNP
rs1172902928 1112 dbSNP
rs1021438190 1114 dbSNP
rs1312194344 1116 dbSNP
rs545551544 1122 dbSNP
rs1374963602 1138 dbSNP
rs1412985669 1140 dbSNP
rs947618506 1143 dbSNP
rs893332408 1146 dbSNP
rs1007324675 1147 dbSNP
rs773763835 1153 dbSNP
rs35482632 1155 dbSNP
rs765668002 1163 dbSNP
rs762046797 1164 dbSNP
rs1214357422 1167 dbSNP
rs187478611 1175 dbSNP
rs182886406 1180 dbSNP
rs943374191 1181 dbSNP
rs910548542 1188 dbSNP
rs56402707 1189 dbSNP
rs1237727410 1190 dbSNP
rs190276955 1191 dbSNP
rs1391855953 1197 dbSNP
rs61762273 1198 dbSNP
rs972323786 1200 dbSNP
rs1325296047 1201 dbSNP
rs374950565 1202 dbSNP
rs796455687 1203 dbSNP
rs1336179856 1205 dbSNP
rs887505980 1210 dbSNP
rs1430354837 1211 dbSNP
rs1287332973 1213 dbSNP
rs1367847908 1213 dbSNP
rs1229569648 1215 dbSNP
rs1303345213 1227 dbSNP
rs960535899 1228 dbSNP
rs1034771395 1229 dbSNP
rs1278782277 1231 dbSNP
rs1275912195 1233 dbSNP
rs1001952569 1234 dbSNP
rs921424897 1237 dbSNP
rs61762274 1239 dbSNP
rs1021954563 1243 dbSNP
rs975230246 1249 dbSNP
rs756247480 1258 dbSNP
rs746054555 1264 dbSNP
rs1192730103 1270 dbSNP
rs1011855273 1271 dbSNP
rs893396987 1276 dbSNP
rs918177666 1278 dbSNP
rs1478937248 1280 dbSNP
rs1173079998 1287 dbSNP
rs1426048377 1290 dbSNP
rs1057159632 1294 dbSNP
rs746536939 1303 dbSNP
rs577375993 1306 dbSNP
rs935590818 1309 dbSNP
rs1436321121 1314 dbSNP
rs1334627527 1317 dbSNP
rs1126457 1319 dbSNP
rs1421841030 1320 dbSNP
rs1275929317 1321 dbSNP
rs182863103 1322 dbSNP
rs1040473186 1323 dbSNP
rs1269659936 1328 dbSNP
rs968123523 1329 dbSNP
rs943445969 1331 dbSNP
rs910578057 1334 dbSNP
rs61762275 1335 dbSNP
rs370075646 1345 dbSNP
rs1232212356 1354 dbSNP
rs953176814 1355 dbSNP
rs555180776 1363 dbSNP
rs1414475171 1366 dbSNP
rs1458016574 1373 dbSNP
rs536525901 1379 dbSNP
rs1180142210 1382 dbSNP
rs745487570 1384 dbSNP
rs1389074370 1385 dbSNP
rs1407412237 1392 dbSNP
rs551520928 1394 dbSNP
rs569557897 1399 dbSNP
rs572774661 1400 dbSNP
rs1238530013 1404 dbSNP
rs1206042899 1408 dbSNP
rs778495014 1410 dbSNP
rs919176452 1411 dbSNP
rs1289614896 1414 dbSNP
rs752637820 1416 dbSNP
rs971967919 1417 dbSNP
rs1270853830 1420 dbSNP
rs190675717 1426 dbSNP
rs927775862 1427 dbSNP
rs980544179 1440 dbSNP
rs141773136 1441 dbSNP
rs1454427990 1442 dbSNP
rs1015026317 1443 dbSNP
rs1366887283 1448 dbSNP
rs1473993956 1454 dbSNP
rs982460495 1454 dbSNP
rs1164126566 1455 dbSNP
rs1005865580 1456 dbSNP
rs1428451503 1457 dbSNP
rs1330381098 1459 dbSNP
rs1466357980 1460 dbSNP
rs887536991 1461 dbSNP
rs1413610189 1462 dbSNP
rs1162823558 1466 dbSNP
rs1022029453 1471 dbSNP
rs1341851350 1475 dbSNP
rs1245253559 1476 dbSNP
rs1296442356 1476 dbSNP
rs561230915 1476 dbSNP
rs1221324447 1477 dbSNP
rs1483436038 1477 dbSNP
rs1415234632 1478 dbSNP
rs1491213939 1478 dbSNP
rs1044800867 1479 dbSNP
rs1185975519 1483 dbSNP
rs1171096902 1488 dbSNP
rs1391276845 1488 dbSNP
rs1403925809 1488 dbSNP
rs1419582493 1488 dbSNP
rs1448014943 1488 dbSNP
rs951002009 1488 dbSNP
rs1317155284 1489 dbSNP
rs1396309849 1489 dbSNP
rs765104918 1489 dbSNP
rs1491461893 1490 dbSNP
rs1011001735 1492 dbSNP
rs896682792 1492 dbSNP
rs956364551 1494 dbSNP
rs1237983426 1496 dbSNP
rs1056623024 1497 dbSNP
rs1032340482 1498 dbSNP
rs1160760463 1498 dbSNP
rs1484276464 1498 dbSNP
rs536018335 1498 dbSNP
rs935607817 1498 dbSNP
rs749728700 1499 dbSNP
rs924193373 1499 dbSNP
rs570163620 1501 dbSNP
rs551849828 1504 dbSNP
rs999112372 1505 dbSNP
rs1454176801 1506 dbSNP
rs1174562039 1516 dbSNP
rs527419080 1519 dbSNP
rs1466084295 1520 dbSNP
rs1157658292 1522 dbSNP
rs1480782289 1522 dbSNP
rs75121449 1523 dbSNP
rs542035605 1527 dbSNP
rs1369956184 1530 dbSNP
rs1385072680 1532 dbSNP
rs1303280082 1544 dbSNP
rs879608204 1548 dbSNP
rs1314073447 1550 dbSNP
rs1040504038 1551 dbSNP
rs985548553 1555 dbSNP
rs1327259134 1566 dbSNP
rs187469301 1566 dbSNP
rs1248123448 1572 dbSNP
rs889215337 1587 dbSNP
rs777769894 1596 dbSNP
rs562786491 1597 dbSNP
rs1433296244 1599 dbSNP
rs1014812208 1606 dbSNP
rs930642082 1608 dbSNP
rs1409321965 1621 dbSNP
rs1391733136 1629 dbSNP
rs1005896631 1631 dbSNP
rs35262526 1631 dbSNP
rs1393511756 1632 dbSNP
rs1456180670 1635 dbSNP
rs1295247375 1638 dbSNP
rs1083 1640 dbSNP
rs1036723682 1641 dbSNP
rs1457546248 1648 dbSNP
rs939236548 1653 dbSNP
rs751719926 1654 dbSNP
rs1023300208 1655 dbSNP
rs1268979385 1657 dbSNP
rs1321519577 1666 dbSNP
rs1219770958 1670 dbSNP
rs980617817 1673 dbSNP
rs1418429306 1678 dbSNP
rs1205055107 1680 dbSNP
rs969181843 1685 dbSNP
rs1380199390 1687 dbSNP
rs1473268191 1700 dbSNP
rs538319727 1714 dbSNP
rs570796891 1715 dbSNP
rs989203982 1717 dbSNP
rs577308330 1720 dbSNP
rs1350413015 1722 dbSNP
rs1252298144 1724 dbSNP
rs1461473337 1730 dbSNP
rs1189110920 1732 dbSNP
rs1030657379 1733 dbSNP
rs1487932573 1734 dbSNP
rs999671416 1744 dbSNP
rs1368838216 1745 dbSNP
rs1411683281 1745 dbSNP
rs902771952 1747 dbSNP
rs868473801 1748 dbSNP
rs1043917998 1749 dbSNP
rs946966477 1751 dbSNP
rs61762276 1761 dbSNP
rs540356320 1762 dbSNP
rs765509891 1764 dbSNP
rs1007692473 1765 dbSNP
rs976332535 1771 dbSNP
rs1205206908 1783 dbSNP
rs1236543219 1787 dbSNP
rs889244816 1790 dbSNP
rs1482037849 1801 dbSNP
rs117239587 1806 dbSNP
rs1298830357 1807 dbSNP
rs1414348416 1810 dbSNP
rs559179006 1812 dbSNP
rs182249851 1817 dbSNP
rs1391897889 1826 dbSNP
rs61762277 1832 dbSNP
rs1023331213 1840 dbSNP
rs1036346195 1843 dbSNP
rs1446175490 1844 dbSNP
rs1159766730 1855 dbSNP
rs1455751954 1867 dbSNP
rs1228065499 1868 dbSNP
rs1296087110 1871 dbSNP
rs61762278 1877 dbSNP
rs547204130 1878 dbSNP
rs1228515265 1881 dbSNP
rs538992884 1888 dbSNP
rs570101189 1889 dbSNP
rs1237675283 1891 dbSNP
rs1464295781 1897 dbSNP
rs768992609 1898 dbSNP
rs551788277 1899 dbSNP
rs190943860 1910 dbSNP
rs1171922051 1912 dbSNP
rs1424598679 1917 dbSNP
rs935080817 1918 dbSNP
rs1261767032 1923 dbSNP
rs561524810 1926 dbSNP
rs1434834147 1928 dbSNP
rs1318885706 1931 dbSNP
rs1205653604 1936 dbSNP
rs1436553666 1938 dbSNP
rs775752892 1944 dbSNP
rs976402172 1947 dbSNP
rs964982500 1948 dbSNP
rs186275076 1949 dbSNP
rs548044993 1950 dbSNP
rs529907963 1952 dbSNP
rs953708188 1957 dbSNP
rs1206420912 1958 dbSNP
rs1269858725 1960 dbSNP
rs1198136596 1961 dbSNP
rs752804799 1961 dbSNP
rs562720325 1962 dbSNP
rs1027810597 1985 dbSNP
rs1192927029 1986 dbSNP
rs543190178 1991 dbSNP
rs533355239 1992 dbSNP
rs1037077619 2001 dbSNP
rs35340932 2005 dbSNP
rs1014987510 2009 dbSNP
rs569179940 2013 dbSNP
rs1285425087 2015 dbSNP
rs758994156 2017 dbSNP
rs550886493 2024 dbSNP
rs1323508461 2025 dbSNP
rs1318985450 2027 dbSNP
rs906491938 2028 dbSNP
rs907740823 2029 dbSNP
rs774004148 2034 dbSNP
rs770421427 2035 dbSNP
rs947942852 2045 dbSNP
rs930567399 2046 dbSNP
rs749173967 2048 dbSNP
rs1287652139 2050 dbSNP
rs893657394 2050 dbSNP
rs1269781153 2051 dbSNP
rs1178165659 2052 dbSNP
rs1180358423 2054 dbSNP
rs532484201 2057 dbSNP
rs1470718557 2059 dbSNP
rs61762279 2060 dbSNP
rs960364150 2066 dbSNP
rs181560142 2068 dbSNP
rs1448711648 2070 dbSNP
rs1035097095 2074 dbSNP
rs1407399146 2077 dbSNP
rs144568032 2082 dbSNP
rs149292052 2083 dbSNP
rs116852245 2088 dbSNP
rs1309504516 2097 dbSNP
rs575428714 2099 dbSNP
rs1243815150 2103 dbSNP
rs1282271456 2104 dbSNP
rs1358196559 2106 dbSNP
rs1199729731 2120 dbSNP
rs1461591516 2128 dbSNP
rs1482784663 2129 dbSNP
rs1203063481 2136 dbSNP
rs966848519 2140 dbSNP
rs1438664158 2141 dbSNP
rs1187096791 2148 dbSNP
rs188704571 2148 dbSNP
rs1367124844 2152 dbSNP
rs1473966102 2154 dbSNP
rs976434801 2157 dbSNP
rs1390054897 2159 dbSNP
rs1427263002 2160 dbSNP
rs1264709636 2166 dbSNP
rs943746895 2168 dbSNP
rs372495162 2179 dbSNP
rs1317469876 2183 dbSNP
rs185507106 2188 dbSNP
rs180983842 2192 dbSNP
rs1331758863 2195 dbSNP
rs1342098461 2196 dbSNP
rs61762280 2205 dbSNP
rs1339297057 2206 dbSNP
rs1296829593 2207 dbSNP
rs1028495240 2213 dbSNP
rs953637297 2214 dbSNP
rs1253208756 2235 dbSNP
rs1340114506 2236 dbSNP
rs550878088 2240 dbSNP
rs998594598 2245 dbSNP
rs1453937552 2250 dbSNP
rs566403211 2258 dbSNP
rs1184520301 2259 dbSNP
rs901211152 2261 dbSNP
rs1408768475 2262 dbSNP
rs1171030318 2263 dbSNP
rs1373190181 2265 dbSNP
rs1465091460 2271 dbSNP
rs1037428592 2272 dbSNP
rs1329684454 2273 dbSNP
rs1004324655 2275 dbSNP
rs1463752858 2284 dbSNP
rs118080805 2291 dbSNP
rs1048940384 2300 dbSNP
rs145050491 2302 dbSNP
rs962488177 2303 dbSNP
rs1296176714 2304 dbSNP
rs930429978 2312 dbSNP
rs142774218 2315 dbSNP
rs1254487508 2320 dbSNP
rs1366704692 2321 dbSNP
rs550823171 2325 dbSNP
rs1182924250 2338 dbSNP
rs532422163 2341 dbSNP
rs1244778229 2346 dbSNP
rs78813594 2350 dbSNP
rs77593303 2351 dbSNP
rs61762281 2352 dbSNP
rs148508496 2356 dbSNP
rs67787583 2356 dbSNP
rs753961418 2356 dbSNP
rs1003623909 2359 dbSNP
rs1470054782 2366 dbSNP
rs200800532 2373 dbSNP
rs565197421 2377 dbSNP
rs1457515952 2382 dbSNP
rs11652581 2388 dbSNP
rs1458573055 2398 dbSNP
rs1289404382 2410 dbSNP
rs1197690663 2418 dbSNP
rs1023625678 2424 dbSNP
rs528491176 2431 dbSNP
rs1054077936 2440 dbSNP
rs1327558376 2441 dbSNP
rs1218342580 2449 dbSNP
rs1261831798 2450 dbSNP
rs1385547933 2455 dbSNP
rs966451492 2456 dbSNP
rs1208570895 2458 dbSNP
rs1270459284 2459 dbSNP
rs1480463494 2463 dbSNP
rs914963569 2464 dbSNP
rs1054079338 2484 dbSNP
rs558638698 2489 dbSNP
rs1409260897 2493 dbSNP
rs1473453154 2495 dbSNP
rs999371762 2498 dbSNP
rs989613817 2502 dbSNP
rs79864792 2509 dbSNP
rs902343775 2516 dbSNP
rs15948 2520 dbSNP
rs943776747 2526 dbSNP
rs1367583203 2530 dbSNP
rs1387955742 2530 dbSNP
rs1162331810 2532 dbSNP
rs61762282 2540 dbSNP
rs146628920 2544 dbSNP
rs879060244 2550 dbSNP
rs189028582 2555 dbSNP
rs1049403107 2560 dbSNP
rs1321462833 2560 dbSNP
rs1243309410 2561 dbSNP
rs1294519706 2572 dbSNP
rs930944310 2577 dbSNP
rs1203728794 2578 dbSNP
rs1233188933 2591 dbSNP
rs920863876 2600 dbSNP
rs974024756 2604 dbSNP
rs563515128 2606 dbSNP
rs545218155 2607 dbSNP
rs1004594476 2615 dbSNP
rs908031603 2622 dbSNP
rs1048469632 2627 dbSNP
rs1425391951 2628 dbSNP
rs982220310 2629 dbSNP
rs970782052 2630 dbSNP
rs1223284571 2634 dbSNP
rs1013004051 2644 dbSNP
rs1444683539 2648 dbSNP
rs1023697714 2651 dbSNP
rs184388452 2662 dbSNP
rs1012259348 2664 dbSNP
rs958241354 2668 dbSNP
rs553639090 2670 dbSNP
rs895014934 2670 dbSNP
rs533507506 2674 dbSNP
rs751041146 2677 dbSNP
rs1228292349 2678 dbSNP
rs1271941792 2680 dbSNP
rs1032302522 2681 dbSNP
rs999841173 2685 dbSNP
rs939306391 2694 dbSNP
rs1351864540 2703 dbSNP
rs1185134026 2706 dbSNP
rs1243693774 2706 dbSNP
rs1281567002 2708 dbSNP
rs1443963342 2709 dbSNP
rs1448854561 2713 dbSNP
rs1186558086 2723 dbSNP
rs1049098 2731 dbSNP
rs1328946192 2737 dbSNP
rs61762283 2739 dbSNP
rs1411680226 2743 dbSNP
rs1171431055 2749 dbSNP
rs1040839405 2750 dbSNP
rs193151207 2755 dbSNP
rs1339172539 2756 dbSNP
rs1383982993 2766 dbSNP
rs1435064604 2770 dbSNP
rs1405025091 2774 dbSNP
rs1296017818 2775 dbSNP
rs1007993550 2777 dbSNP
rs1363483369 2777 dbSNP
rs1367438404 2789 dbSNP
rs1156792511 2794 dbSNP
rs1277487249 2794 dbSNP
rs1399975866 2796 dbSNP
rs1408483776 2800 dbSNP
rs1160039235 2802 dbSNP
rs1477188721 2803 dbSNP
rs536331949 2806 dbSNP
rs1042067810 2813 dbSNP
rs1476433028 2817 dbSNP
rs945007674 2819 dbSNP
rs1490856252 2820 dbSNP
rs1424531390 2822 dbSNP
rs1261046656 2829 dbSNP
rs1178812085 2839 dbSNP
rs1407362719 2840 dbSNP
rs1457000171 2843 dbSNP
rs1316884047 2848 dbSNP
rs568995973 2848 dbSNP
rs1430844980 2849 dbSNP
rs868601759 2849 dbSNP
rs763046117 2852 dbSNP
rs930996930 2856 dbSNP
rs61762284 2857 dbSNP
rs61762285 2858 dbSNP
rs921467722 2858 dbSNP
rs932394313 2858 dbSNP
rs977302363 2858 dbSNP
rs1286276482 2859 dbSNP
rs1220737096 2866 dbSNP
rs1447570250 2866 dbSNP
rs940924637 2867 dbSNP
rs1489874100 2868 dbSNP
rs1217802452 2870 dbSNP
rs908064178 2872 dbSNP
rs1201889036 2879 dbSNP
rs982805936 2883 dbSNP
rs1282229618 2898 dbSNP
rs1472471815 2898 dbSNP
rs952728755 2914 dbSNP
rs1401869409 2920 dbSNP
rs1346858469 2923 dbSNP
rs982293984 2926 dbSNP
rs1026981327 2949 dbSNP
rs1013036022 2951 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site CDS
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uugauauguuggaGGAUGGAGu 5'
                       |||:|||| 
Target 5' ----------agaCCTGCCTCc 3'
1 - 12
Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
LUSC -0.318 0.03 -0.211 0.1 38 Click to see details
CHOL -0.569 0.05 -0.433 0.12 9 Click to see details
THCA 0.206 0.06 0.156 0.12 59 Click to see details
PCPG 0.974 0.07 1.000 0.5 3 Click to see details
PAAD 0.827 0.09 0.800 0.1 4 Click to see details
ESCA -0.397 0.11 -0.373 0.13 11 Click to see details
BLCA -0.287 0.12 -0.393 0.05 18 Click to see details
BRCA 0.093 0.2 0.074 0.25 84 Click to see details
KIRC 0.095 0.22 0.062 0.31 68 Click to see details
STAD -0.125 0.25 -0.118 0.26 32 Click to see details
PRAD -0.092 0.26 -0.181 0.1 50 Click to see details
HNSC -0.076 0.32 -0.031 0.42 42 Click to see details
COAD -0.182 0.33 -0.214 0.31 8 Click to see details
LIHC 0.041 0.39 -0.114 0.22 49 Click to see details
LUAD -0.07 0.41 -0.028 0.47 12 Click to see details
UCEC 0.05 0.42 0.091 0.36 19 Click to see details
KIRP -0.035 0.42 -0.042 0.41 32 Click to see details
KICH -0.028 0.45 0.012 0.48 25 Click to see details
KICH -0.028 0.45 0.012 0.48 25 Click to see details
CESC -1 0.5 -1.000 0.5 3 Click to see details
CESC -1 0.5 -1.000 0.5 3 Click to see details
581 hsa-let-7e-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT002081 HMGA2 high mobility group AT-hook 2 5 5
MIRT003932 EIF3J eukaryotic translation initiation factor 3 subunit J 2 1
MIRT004469 SMC1A structural maintenance of chromosomes 1A 4 7
MIRT005718 WNT1 Wnt family member 1 4 1
MIRT006122 CCND1 cyclin D1 5 4
MIRT006404 MPL MPL proto-oncogene, thrombopoietin receptor 1 1
MIRT032098 RABGAP1L RAB GTPase activating protein 1 like 1 1
MIRT032099 DAD1 defender against cell death 1 1 1
MIRT032100 MYCN MYCN proto-oncogene, bHLH transcription factor 4 2
MIRT051413 WDR67 TBC1 domain family member 31 1 1
MIRT051414 FAM219B family with sequence similarity 219 member B 1 1
MIRT051415 C11orf91 chromosome 11 open reading frame 91 1 1
MIRT051416 CENPP centromere protein P 1 1
MIRT051417 TMEM107 transmembrane protein 107 1 1
MIRT051418 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT051419 DAAM1 dishevelled associated activator of morphogenesis 1 1 1
MIRT051420 DGCR8 DGCR8, microprocessor complex subunit 1 1
MIRT051421 RAP1A RAP1A, member of RAS oncogene family 1 1
MIRT051422 RPA1 replication protein A1 1 1
MIRT051423 SKIV2L Ski2 like RNA helicase 1 1
MIRT051424 AGO1 argonaute 1, RISC catalytic component 4 2
MIRT051425 RPS27 ribosomal protein S27 1 1
MIRT051426 ARNT2 aryl hydrocarbon receptor nuclear translocator 2 1 1
MIRT051427 GPM6B glycoprotein M6B 1 1
MIRT051428 TTLL12 tubulin tyrosine ligase like 12 1 1
MIRT051429 HIST2H2BF histone cluster 2 H2B family member f 1 1
MIRT051430 CELF2 CUGBP Elav-like family member 2 1 1
MIRT051431 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT051432 VPS13D vacuolar protein sorting 13 homolog D 1 1
MIRT051433 RPL10 ribosomal protein L10 1 1
MIRT051434 SPCS2 signal peptidase complex subunit 2 1 1
MIRT051435 DCAF8 DDB1 and CUL4 associated factor 8 1 1
MIRT051436 CTC1 CST telomere replication complex component 1 1 1
MIRT051437 NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit 1 1
MIRT051438 PHF3 PHD finger protein 3 1 1
MIRT051439 TUBA1B tubulin alpha 1b 1 1
MIRT051440 SHANK1 SH3 and multiple ankyrin repeat domains 1 1 1
MIRT051441 SKA2 spindle and kinetochore associated complex subunit 2 1 1
MIRT051442 SPTBN1 spectrin beta, non-erythrocytic 1 1 1
MIRT051443 ND2 MTND2 1 1
MIRT051444 MED13L mediator complex subunit 13 like 1 1
MIRT051445 RCOR3 REST corepressor 3 1 1
MIRT051446 MACF1 microtubule-actin crosslinking factor 1 1 1
MIRT051447 RDX radixin 2 5
MIRT051448 PCBP2 poly(rC) binding protein 2 1 1
MIRT051449 UBAP2L ubiquitin associated protein 2 like 1 1
MIRT051450 CDCA3 cell division cycle associated 3 1 1
MIRT051451 CABLES1 Cdk5 and Abl enzyme substrate 1 1 1
MIRT051452 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 1
MIRT051453 C12orf49 chromosome 12 open reading frame 49 1 1
MIRT051454 TIMP3 TIMP metallopeptidase inhibitor 3 1 1
MIRT051455 WBSCR16 RCC1 like 1 1
MIRT051456 SLC2A11 solute carrier family 2 member 11 1 1
MIRT051457 NF1 neurofibromin 1 1 1
MIRT051458 LRRC8A leucine rich repeat containing 8 VRAC subunit A 1 1
MIRT051459 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT051460 DTNB dystrobrevin beta 1 1
MIRT051461 SCMH1 Scm polycomb group protein homolog 1 1 1
MIRT051462 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT051463 RHBDD2 rhomboid domain containing 2 1 1
MIRT051464 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT051465 NDST1 N-deacetylase and N-sulfotransferase 1 1 1
MIRT051466 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 5
MIRT051467 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT051468 BAHCC1 BAH domain and coiled-coil containing 1 1 1
MIRT051469 CARM1 coactivator associated arginine methyltransferase 1 1 1
MIRT051470 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT051471 ND3 NADH dehydrogenase, subunit 3 (complex I) 1 1
MIRT051472 PIGS phosphatidylinositol glycan anchor biosynthesis class S 1 1
MIRT051473 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT051474 RPN2 ribophorin II 1 1
MIRT051475 RPL12 ribosomal protein L12 1 1
MIRT051476 NME4 NME/NM23 nucleoside diphosphate kinase 4 1 1
MIRT051477 IVD isovaleryl-CoA dehydrogenase 1 1
MIRT051478 JAZF1 JAZF zinc finger 1 1 1
MIRT051479 ND4 NADH dehydrogenase, subunit 4 (complex I) 1 1
MIRT051480 VARS valyl-tRNA synthetase 1 1
MIRT051481 RNF26 ring finger protein 26 1 1
MIRT051482 LHFPL2 LHFPL tetraspan subfamily member 2 1 1
MIRT051483 ARCN1 archain 1 1 1
MIRT051484 COX1 cytochrome c oxidase subunit I 1 1
MIRT051485 SLC12A4 solute carrier family 12 member 4 1 1
MIRT051486 AEBP2 AE binding protein 2 1 1
MIRT051487 PET112 glutamyl-tRNA amidotransferase subunit B 1 1
MIRT051488 UROC1 urocanate hydratase 1 1 1
MIRT051489 IGF1R insulin like growth factor 1 receptor 5 10
MIRT051490 BSDC1 BSD domain containing 1 1 1
MIRT051491 PTK2 protein tyrosine kinase 2 1 1
MIRT051492 CDC5L cell division cycle 5 like 1 1
MIRT051493 EN2 engrailed homeobox 2 1 1
MIRT051494 SSB Sjogren syndrome antigen B 1 1
MIRT051495 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT051496 RRAGC Ras related GTP binding C 1 1
MIRT051497 ZNF236 zinc finger protein 236 1 1
MIRT051498 SEMA4B semaphorin 4B 1 1
MIRT051499 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT051500 XIAP X-linked inhibitor of apoptosis 1 1
MIRT051501 GTF2I general transcription factor IIi 1 1
MIRT051502 JMJD1C jumonji domain containing 1C 1 1
MIRT051503 OTUD5 OTU deubiquitinase 5 1 1
MIRT051504 NOLC1 nucleolar and coiled-body phosphoprotein 1 1 1
MIRT051505 PPIG peptidylprolyl isomerase G 1 1
MIRT051506 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT051507 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 1 1
MIRT051508 VAMP2 vesicle associated membrane protein 2 1 1
MIRT051509 LSR lipolysis stimulated lipoprotein receptor 1 1
MIRT051510 KIAA0355 KIAA0355 1 1
MIRT051511 RPSA ribosomal protein SA 1 1
MIRT051512 DCAF6 DDB1 and CUL4 associated factor 6 1 1
MIRT051513 UHRF1BP1 UHRF1 binding protein 1 1 1
MIRT051514 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 1 1
MIRT051515 PIGP phosphatidylinositol glycan anchor biosynthesis class P 1 1
MIRT051516 LMLN leishmanolysin like peptidase 1 1
MIRT051517 PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 1 1
MIRT051518 HIPK1 homeodomain interacting protein kinase 1 1 1
MIRT051519 SERF2 small EDRK-rich factor 2 1 1
MIRT051520 RBM4 RNA binding motif protein 4 1 1
MIRT051521 RBM14 RNA binding motif protein 14 1 1
MIRT051522 HMGB1 high mobility group box 1 1 1
MIRT051523 GMPS guanine monophosphate synthase 1 1
MIRT051524 DIAPH1 diaphanous related formin 1 1 1
MIRT051525 STAM signal transducing adaptor molecule 1 1
MIRT051526 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT051527 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 1 1
MIRT051528 MARCH5 membrane associated ring-CH-type finger 5 1 1
MIRT051529 SQLE squalene epoxidase 1 1
MIRT051530 TIMM50 translocase of inner mitochondrial membrane 50 1 1
MIRT051531 NDUFA3 NADH:ubiquinone oxidoreductase subunit A3 1 1
MIRT051532 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 1 1
MIRT051533 NRSN2 neurensin 2 1 1
MIRT051534 SALL1 spalt like transcription factor 1 1 1
MIRT051535 COX3 cytochrome c oxidase III 1 1
MIRT051536 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT051537 SUPT4H1 SPT4 homolog, DSIF elongation factor subunit 1 1
MIRT051538 PACS2 phosphofurin acidic cluster sorting protein 2 1 1
MIRT051539 MTMR14 myotubularin related protein 14 1 1
MIRT051540 LUZP1 leucine zipper protein 1 1 1
MIRT051541 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT051542 SUZ12 SUZ12 polycomb repressive complex 2 subunit 1 1
MIRT051543 PAPD4 poly(A) RNA polymerase D4, non-canonical 1 1
MIRT051544 QSOX1 quiescin sulfhydryl oxidase 1 1 1
MIRT051545 SPATA13 spermatogenesis associated 13 1 1
MIRT051546 DHX57 DExH-box helicase 57 1 1
MIRT051547 KATNB1 katanin regulatory subunit B1 1 1
MIRT051548 COL6A1 collagen type VI alpha 1 chain 1 1
MIRT051549 DHX15 DEAH-box helicase 15 1 1
MIRT051550 MTCH2 mitochondrial carrier 2 1 1
MIRT051551 KIAA0100 KIAA0100 1 1
MIRT051552 SUGP2 SURP and G-patch domain containing 2 1 1
MIRT051553 NCLN nicalin 1 1
MIRT051554 ATXN2L ataxin 2 like 1 1
MIRT051555 CHD9 chromodomain helicase DNA binding protein 9 1 1
MIRT051556 PES1 pescadillo ribosomal biogenesis factor 1 1 1
MIRT051557 NUP155 nucleoporin 155 2 7
MIRT051558 GNG5 G protein subunit gamma 5 2 3
MIRT051559 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT051560 MTFR1 mitochondrial fission regulator 1 1 1
MIRT051561 IRS2 insulin receptor substrate 2 2 1
MIRT051562 IRS4 insulin receptor substrate 4 1 1
MIRT051563 PPP1R10 protein phosphatase 1 regulatory subunit 10 1 1
MIRT051564 ZNF284 zinc finger protein 284 1 1
MIRT051565 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 1 1
MIRT051566 SCD stearoyl-CoA desaturase 1 1
MIRT051567 FDPS farnesyl diphosphate synthase 1 1
MIRT051568 KRBOX4 KRAB box domain containing 4 1 1
MIRT051569 BRI3 brain protein I3 1 1
MIRT051570 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT051571 PYCR1 pyrroline-5-carboxylate reductase 1 1 1
MIRT051572 SMAP2 small ArfGAP2 1 1
MIRT051573 WDFY3 WD repeat and FYVE domain containing 3 1 1
MIRT051574 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT051575 SRSF2 serine and arginine rich splicing factor 2 1 1
MIRT051576 PGD phosphogluconate dehydrogenase 1 1
MIRT051577 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT051578 ZNF652 zinc finger protein 652 1 1
MIRT051579 PSMA6 proteasome subunit alpha 6 1 1
MIRT051580 SLC38A2 solute carrier family 38 member 2 1 1
MIRT051581 LRRC41 leucine rich repeat containing 41 1 1
MIRT051582 RANBP2 RAN binding protein 2 1 1
MIRT051583 SVIL supervillin 1 1
MIRT051584 CCNG1 cyclin G1 1 1
MIRT051585 ZNF256 zinc finger protein 256 1 1
MIRT051586 COPG1 coatomer protein complex subunit gamma 1 1 1
MIRT051587 PDCD11 programmed cell death 11 1 1
MIRT051588 CNBP CCHC-type zinc finger nucleic acid binding protein 1 1
MIRT051589 USP37 ubiquitin specific peptidase 37 1 1
MIRT051590 UBE2V2 ubiquitin conjugating enzyme E2 V2 1 1
MIRT051591 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT051592 LMNA lamin A/C 1 1
MIRT051593 STAT3 signal transducer and activator of transcription 3 1 1
MIRT051594 TRPV1 transient receptor potential cation channel subfamily V member 1 1 1
MIRT051595 MATR3 matrin 3 1 1
MIRT051596 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 1
MIRT051597 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 1 1
MIRT051598 WDR48 WD repeat domain 48 1 1
MIRT051599 RBM8A RNA binding motif protein 8A 1 1
MIRT051600 SCYL1 SCY1 like pseudokinase 1 1 1
MIRT051601 C19orf48 chromosome 19 open reading frame 48 1 1
MIRT051602 FOXD4L6 forkhead box D4 like 6 1 1
MIRT051603 PIGN phosphatidylinositol glycan anchor biosynthesis class N 1 1
MIRT051604 SPCS3 signal peptidase complex subunit 3 1 1
MIRT051605 TNFAIP1 TNF alpha induced protein 1 1 1
MIRT051606 MS4A10 membrane spanning 4-domains A10 1 1
MIRT051607 MSMO1 methylsterol monooxygenase 1 1 1
MIRT051608 ARID1A AT-rich interaction domain 1A 1 1
MIRT051609 NCKIPSD NCK interacting protein with SH3 domain 2 5
MIRT051610 NCBP1 nuclear cap binding protein subunit 1 1 1
MIRT051611 COX16 COX16, cytochrome c oxidase assembly homolog 1 1
MIRT051612 NUDT8 nudix hydrolase 8 1 1
MIRT051613 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT051614 TXNRD1 thioredoxin reductase 1 1 1
MIRT051615 ELMSAN1 ELM2 and Myb/SANT domain containing 1 1 1
MIRT051616 CTSA cathepsin A 1 1
MIRT051617 PRRC2A proline rich coiled-coil 2A 1 1
MIRT051618 SPAG9 sperm associated antigen 9 1 1
MIRT051619 AGMAT agmatinase 1 1
MIRT051620 NCKAP5L NCK associated protein 5 like 1 1
MIRT051621 ZFP62 ZFP62 zinc finger protein 1 1
MIRT051622 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1 1
MIRT051623 POLR3D RNA polymerase III subunit D 2 3
MIRT051624 PRPF8 pre-mRNA processing factor 8 1 1
MIRT051625 ATP6 ATP synthase F0 subunit 6 1 1
MIRT051626 ZFAND5 zinc finger AN1-type containing 5 1 1
MIRT051627 BAZ1B bromodomain adjacent to zinc finger domain 1B 1 1
MIRT051628 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT051629 BMP2K BMP2 inducible kinase 1 1
MIRT051630 SPN sialophorin 1 1
MIRT051631 PA2G4 proliferation-associated 2G4 1 1
MIRT051632 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 1
MIRT051633 TUBB4B tubulin beta 4B class IVb 1 1
MIRT051634 TRRAP transformation/transcription domain associated protein 1 1
MIRT051635 SLCO4A1 solute carrier organic anion transporter family member 4A1 1 1
MIRT051636 CCRN4L nocturnin 1 1
MIRT051637 USE1 unconventional SNARE in the ER 1 1 1
MIRT051638 STARD7 StAR related lipid transfer domain containing 7 1 1
MIRT051639 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 3
MIRT051640 CLTC clathrin heavy chain 1 1
MIRT051641 TERF1 telomeric repeat binding factor 1 1 1
MIRT051642 PAX3 paired box 3 1 1
MIRT051643 CCDC97 coiled-coil domain containing 97 1 1
MIRT051644 HLA-C major histocompatibility complex, class I, C 1 1
MIRT051645 GTPBP8 GTP binding protein 8 (putative) 1 1
MIRT051646 VGLL4 vestigial like family member 4 1 1
MIRT051647 ANKRD40 ankyrin repeat domain 40 1 1
MIRT051648 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 1 1
MIRT051649 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT051650 DSP desmoplakin 1 1
MIRT051651 UBN2 ubinuclein 2 1 1
MIRT051652 ZNF805 zinc finger protein 805 1 1
MIRT051653 RBBP4 RB binding protein 4, chromatin remodeling factor 1 1
MIRT051654 OCLN occludin 1 1
MIRT051655 CBX5 chromobox 5 2 3
MIRT051656 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT051657 MKI67 marker of proliferation Ki-67 1 1
MIRT051658 SUB1 SUB1 homolog, transcriptional regulator 1 1
MIRT051659 RSL1D1 ribosomal L1 domain containing 1 1 1
MIRT051660 SEC23IP SEC23 interacting protein 1 1
MIRT051661 RNMT RNA guanine-7 methyltransferase 1 1
MIRT051662 SGSM3 small G protein signaling modulator 3 1 1
MIRT051663 ZFP3 ZFP3 zinc finger protein 1 1
MIRT051664 GLUL glutamate-ammonia ligase 1 1
MIRT051665 POLD1 DNA polymerase delta 1, catalytic subunit 1 1
MIRT051666 WDR4 WD repeat domain 4 1 1
MIRT051667 PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 1 1
MIRT051668 RAI2 retinoic acid induced 2 1 1
MIRT051669 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 1 1
MIRT051670 UTP15 UTP15, small subunit processome component 1 1
MIRT051671 THADA THADA, armadillo repeat containing 1 1
MIRT051672 ZNF451 zinc finger protein 451 1 1
MIRT051673 CREBBP CREB binding protein 1 1
MIRT051674 ZNF770 zinc finger protein 770 1 1
MIRT051675 CLDN4 claudin 4 1 1
MIRT051676 ZKSCAN7 zinc finger with KRAB and SCAN domains 7 1 1
MIRT051677 NICN1 nicolin 1 1 1
MIRT051678 RPLP2 ribosomal protein lateral stalk subunit P2 1 1
MIRT051679 DCBLD2 discoidin, CUB and LCCL domain containing 2 1 1
MIRT051680 IRGQ immunity related GTPase Q 1 1
MIRT051681 CA5B carbonic anhydrase 5B 1 1
MIRT051682 COX14 COX14, cytochrome c oxidase assembly factor 1 1
MIRT051683 PSD3 pleckstrin and Sec7 domain containing 3 1 1
MIRT051684 RPL27A ribosomal protein L27a 1 1
MIRT051685 CWC15 CWC15 spliceosome associated protein homolog 1 1
MIRT051686 NT5DC2 5'-nucleotidase domain containing 2 1 1
MIRT051687 OR7D2 olfactory receptor family 7 subfamily D member 2 1 1
MIRT051688 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 1 1
MIRT051689 NUDT15 nudix hydrolase 15 1 1
MIRT051690 CDH18 cadherin 18 1 1
MIRT051691 FAM160B1 family with sequence similarity 160 member B1 1 1
MIRT051692 DZIP1 DAZ interacting zinc finger protein 1 1 1
MIRT051693 TDRD7 tudor domain containing 7 1 1
MIRT051694 TCF4 transcription factor 4 1 1
MIRT051695 ENSA endosulfine alpha 1 1
MIRT051696 GTF3C1 general transcription factor IIIC subunit 1 1 1
MIRT051697 TNFRSF1A TNF receptor superfamily member 1A 1 1
MIRT051698 CCDC113 coiled-coil domain containing 113 1 1
MIRT051699 MYO9B myosin IXB 1 1
MIRT051700 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 1 1
MIRT051701 PRAMEF13 PRAME family member 13 1 1
MIRT051702 PMPCA peptidase, mitochondrial processing alpha subunit 2 5
MIRT051703 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT051704 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT051705 CCDC106 coiled-coil domain containing 106 1 1
MIRT051706 CYP2B6 cytochrome P450 family 2 subfamily B member 6 1 1
MIRT051707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 3
MIRT051708 PSME4 proteasome activator subunit 4 1 1
MIRT051709 SETD1A SET domain containing 1A 1 1
MIRT054561 MMP9 matrix metallopeptidase 9 3 1
MIRT054579 IGF1 insulin like growth factor 1 3 1
MIRT063195 ADIPOR2 adiponectin receptor 2 2 2
MIRT065687 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT067399 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT068154 TXLNA taxilin alpha 2 2
MIRT068528 NHLRC3 NHL repeat containing 3 2 6
MIRT068789 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT073006 ARID3B AT-rich interaction domain 3B 2 6
MIRT076223 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT077616 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT080398 ONECUT2 one cut homeobox 2 2 2
MIRT083300 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT084976 BACH1 BTB domain and CNC homolog 1 2 2
MIRT094160 PCGF3 polycomb group ring finger 3 2 6
MIRT094460 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT095766 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT100094 ABT1 activator of basal transcription 1 2 8
MIRT112242 MDM4 MDM4, p53 regulator 2 4
MIRT118586 STK4 serine/threonine kinase 4 2 2
MIRT120921 PDE12 phosphodiesterase 12 2 8
MIRT123317 CALU calumenin 2 2
MIRT152272 TNFSF9 TNF superfamily member 9 2 2
MIRT153847 NCOA3 nuclear receptor coactivator 3 2 2
MIRT168583 HMGA1 high mobility group AT-hook 1 2 4
MIRT180603 CRY2 cryptochrome circadian clock 2 2 2
MIRT187717 SUOX sulfite oxidase 2 2
MIRT191404 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT193101 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT215720 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT218815 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT240330 UBXN2B UBX domain protein 2B 2 2
MIRT243473 TRIM71 tripartite motif containing 71 2 2
MIRT244069 EDN1 endothelin 1 2 2
MIRT252330 SALL3 spalt like transcription factor 3 2 2
MIRT255314 CDV3 CDV3 homolog 2 2
MIRT259277 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT259479 TXLNG taxilin gamma 2 2
MIRT260707 CLDN12 claudin 12 2 6
MIRT264693 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT266212 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT266626 CHTOP chromatin target of PRMT1 2 2
MIRT268839 C1ORF21 chromosome 1 open reading frame 21 2 2
MIRT294446 ZNF264 zinc finger protein 264 2 2
MIRT297013 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT297443 SLC20A1 solute carrier family 20 member 1 2 4
MIRT300037 BZW1 basic leucine zipper and W2 domains 1 2 4
MIRT300893 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT303320 MXD1 MAX dimerization protein 1 2 2
MIRT309846 NAT8L N-acetyltransferase 8 like 2 2
MIRT322428 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT324731 ACER2 alkaline ceramidase 2 2 2
MIRT402057 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437395 LIN28A lin-28 homolog A 4 1
MIRT437396 AURKB aurora kinase B 4 1
MIRT437435 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 1
MIRT438632 TNFRSF10B TNF receptor superfamily member 10b 2 1
MIRT439135 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT442020 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT445658 ATP6V1G1 ATPase H+ transporting V1 subunit G1 2 6
MIRT447136 KIF27 kinesin family member 27 2 2
MIRT448259 ZNF774 zinc finger protein 774 2 2
MIRT449005 ANKRD46 ankyrin repeat domain 46 2 2
MIRT449953 FMNL3 formin like 3 2 2
MIRT451155 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451624 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451693 C1RL complement C1r subcomponent like 2 2
MIRT452092 NUCB2 nucleobindin 2 2 2
MIRT452431 QDPR quinoid dihydropteridine reductase 2 2
MIRT452943 DISC1 disrupted in schizophrenia 1 2 2
MIRT453401 RHD Rh blood group D antigen 2 6
MIRT454164 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT454280 FXN frataxin 2 2
MIRT454539 RABL2A RAB, member of RAS oncogene family like 2A 2 2
MIRT454854 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455676 GLO1 glyoxalase I 2 2
MIRT457248 RABL2B RAB, member of RAS oncogene family like 2B 2 2
MIRT457677 ZNF587 zinc finger protein 587 2 2
MIRT457887 THEM6 thioesterase superfamily member 6 2 4
MIRT458016 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458279 FUT10 fucosyltransferase 10 2 2
MIRT459736 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT460453 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460500 FAM105A family with sequence similarity 105 member A 2 6
MIRT460938 NOA1 nitric oxide associated 1 2 4
MIRT461092 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461169 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461364 COL8A1 collagen type VIII alpha 1 chain 2 2
MIRT462382 YAE1D1 Yae1 domain containing 1 2 2
MIRT462780 ZNF8 zinc finger protein 8 2 2
MIRT463420 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463662 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT464265 VCL vinculin 2 2
MIRT465122 TSC22D2 TSC22 domain family member 2 2 4
MIRT466184 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466722 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT469102 RNF144B ring finger protein 144B 2 2
MIRT469714 RAB40C RAB40C, member RAS oncogene family 2 2
MIRT470425 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT470679 POLR2D RNA polymerase II subunit D 2 4
MIRT470861 PLXND1 plexin D1 2 2
MIRT471271 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471957 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472672 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 2 2
MIRT472739 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473134 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT473234 SMCR7L mitochondrial elongation factor 1 1 4
MIRT473828 MAP2K7 mitogen-activated protein kinase kinase 7 2 2
MIRT473940 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT474022 LRRC20 leucine rich repeat containing 20 2 2
MIRT474502 KLHDC8B kelch domain containing 8B 2 2
MIRT474766 KIAA0930 KIAA0930 2 2
MIRT474905 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT475331 IFNLR1 interferon lambda receptor 1 2 2
MIRT475379 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT475733 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT476548 GABPB1 GA binding protein transcription factor beta subunit 1 2 4
MIRT476973 FAM83G family with sequence similarity 83 member G 2 4
MIRT477534 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 2 4
MIRT477682 EFHD2 EF-hand domain family member D2 2 2
MIRT481201 ATXN7L3B ataxin 7 like 3B 2 4
MIRT481241 ATXN7L3 ataxin 7 like 3 2 2
MIRT481363 ATG9A autophagy related 9A 2 2
MIRT481388 ATG12 autophagy related 12 2 2
MIRT481652 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT481851 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT482184 AHR aryl hydrocarbon receptor 2 2
MIRT482220 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT485296 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT486659 ZNF28 zinc finger protein 28 2 2
MIRT489413 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491867 ZBTB5 zinc finger and BTB domain containing 5 2 8
MIRT492216 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492626 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT493323 LIMD2 LIM domain containing 2 2 2
MIRT493901 FAM43A family with sequence similarity 43 member A 2 4
MIRT494263 CEP120 centrosomal protein 120 2 2
MIRT494687 ARID3A AT-rich interaction domain 3A 2 2
MIRT495968 TBC1D19 TBC1 domain family member 19 2 2
MIRT496111 SNX17 sorting nexin 17 2 2
MIRT497875 SLC12A7 solute carrier family 12 member 7 2 2
MIRT498122 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT499405 PLCG2 phospholipase C gamma 2 2 4
MIRT499493 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 2
MIRT499653 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 2 2
MIRT499942 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT499997 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT500819 THBS1 thrombospondin 1 2 3
MIRT500902 STRN striatin 2 4
MIRT501118 SLC5A6 solute carrier family 5 member 6 2 4
MIRT501173 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT501241 SEMA4C semaphorin 4C 2 6
MIRT501328 RNFT1 ring finger protein, transmembrane 1 2 2
MIRT501355 RNF44 ring finger protein 44 2 4
MIRT501387 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT501441 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT501759 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501943 MBD2 methyl-CpG binding domain protein 2 2 8
MIRT502106 KPNA5 karyopherin subunit alpha 5 2 8
MIRT502130 KMT2D lysine methyltransferase 2D 2 4
MIRT502784 CEP135 centrosomal protein 135 2 2
MIRT502845 CELF1 CUGBP Elav-like family member 1 2 2
MIRT504789 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT505017 ZNF644 zinc finger protein 644 2 2
MIRT506942 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT507252 FIGN fidgetin, microtubule severing factor 2 8
MIRT507694 COIL coilin 2 6
MIRT508401 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508665 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT508932 AK4 adenylate kinase 4 2 4
MIRT510395 ZNF566 zinc finger protein 566 2 6
MIRT510518 YOD1 YOD1 deubiquitinase 2 6
MIRT511386 IKZF3 IKAROS family zinc finger 3 2 4
MIRT512745 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT515954 C9orf156 tRNA methyltransferase O 2 2
MIRT516083 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT523619 FZD9 frizzled class receptor 9 2 4
MIRT523733 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523990 DVL3 dishevelled segment polarity protein 3 2 2
MIRT524113 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT525727 SOD2 superoxide dismutase 2 2 2
MIRT527763 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT529727 OPRL1 opioid related nociceptin receptor 1 2 2
MIRT533187 WASL Wiskott-Aldrich syndrome like 2 6
MIRT536378 LEFTY1 left-right determination factor 1 2 2
MIRT543785 RBM12B RNA binding motif protein 12B 2 4
MIRT543868 SLC16A9 solute carrier family 16 member 9 2 2
MIRT545387 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545890 ZNF200 zinc finger protein 200 2 4
MIRT546334 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547373 MSI2 musashi RNA binding protein 2 2 2
MIRT547579 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548264 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT548351 EPHA4 EPH receptor A4 2 2
MIRT548534 DUSP1 dual specificity phosphatase 1 2 2
MIRT548560 DNAL1 dynein axonemal light chain 1 2 2
MIRT548779 COLEC12 collectin subfamily member 12 2 2
MIRT548978 CCNT2 cyclin T2 2 2
MIRT549208 BEND4 BEN domain containing 4 2 4
MIRT549763 ZNF611 zinc finger protein 611 2 6
MIRT549799 KIAA0391 KIAA0391 2 2
MIRT549847 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 2
MIRT550898 ACTA1 actin, alpha 1, skeletal muscle 2 2
MIRT551283 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551318 GSG2 histone H3 associated protein kinase 2 6
MIRT551932 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552003 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT552410 ZNF460 zinc finger protein 460 2 4
MIRT553013 USP38 ubiquitin specific peptidase 38 2 2
MIRT555550 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT555711 PDZD8 PDZ domain containing 8 2 2
MIRT557372 HAND1 heart and neural crest derivatives expressed 1 2 2
MIRT557960 FAM222B family with sequence similarity 222 member B 2 2
MIRT559087 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559497 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT561772 PEG10 paternally expressed 10 2 2
MIRT564402 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT565443 SURF4 surfeit 4 2 2
MIRT566518 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT567715 E2F6 E2F transcription factor 6 2 2
MIRT568655 ABHD17C abhydrolase domain containing 17C 2 2
MIRT569498 THYN1 thymocyte nuclear protein 1 2 2
MIRT573820 TGOLN2 trans-golgi network protein 2 2 2
MIRT574363 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT574750 GOLGA4 golgin A4 2 2
MIRT574788 FAM104A family with sequence similarity 104 member A 2 2
MIRT576089 Poteg POTE ankyrin domain family, member G 2 2
MIRT576812 Thbs1 thrombospondin 1 2 3
MIRT616370 RWDD1 RWD domain containing 1 2 2
MIRT617851 FMO4 flavin containing monooxygenase 4 2 2
MIRT642394 ZNF556 zinc finger protein 556 2 2
MIRT680519 PRIM2 DNA primase subunit 2 2 2
MIRT680547 ZNF584 zinc finger protein 584 2 2
MIRT680800 ZNF578 zinc finger protein 578 2 2
MIRT680838 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT681141 INTS7 integrator complex subunit 7 2 2
MIRT681271 RFC2 replication factor C subunit 2 2 2
MIRT681323 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT681359 BRI3BP BRI3 binding protein 2 2
MIRT681506 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681536 ZNF738 zinc finger protein 738 2 2
MIRT681658 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT681738 RAB19 RAB19, member RAS oncogene family 2 4
MIRT681797 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681869 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT681941 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682102 ITGA3 integrin subunit alpha 3 2 4
MIRT682181 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682238 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682384 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682444 MTX3 metaxin 3 2 2
MIRT682604 CPA4 carboxypeptidase A4 2 2
MIRT682640 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT689327 FPR1 formyl peptide receptor 1 2 2
MIRT689730 ATXN2 ataxin 2 2 2
MIRT691036 ZNF799 zinc finger protein 799 2 2
MIRT691935 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT694884 ZNF417 zinc finger protein 417 2 2
MIRT695255 ZNF443 zinc finger protein 443 2 2
MIRT695413 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT700589 PRSS22 protease, serine 22 2 2
MIRT701428 NHLRC2 NHL repeat containing 2 2 2
MIRT702484 KIAA1328 KIAA1328 2 2
MIRT702715 IPO9 importin 9 2 2
MIRT704028 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT704418 CTPS1 CTP synthase 1 2 2
MIRT705750 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT712373 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT713520 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT731263 FASLG Fas ligand 3 1
MIRT732697 Ccr7 chemokine (C-C motif) receptor 7 2 0
MIRT732700 Snhg12 small nucleolar RNA host gene 12 2 0
MIRT734626 SYT7 synaptotagmin 7 1 0
MIRT755829 UBQLN4 ubiquilin 4 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
let-7e Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
let-7e Hydroxamic acid HDACi LAQ824 NULL NULL Microarray breast cancer cell line SKBr3 16452179 2006 down-regulated
let-7e Doxorubicin approved 31703 Microarray ovarian cancer 19237188 2009 up-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
let-7e Etoposide approved 36462 Microarray Normal human fibroblasts (AG01522) 19633716 2009 up-regulated
let-7e Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
let-7e 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 down-regulated
let-7e Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
let-7e Marine fungal metabolite 1386A NULL NULL Microarray MCF-7 breast cancer cells. 22159329 2012 down-regulated
let-7e Ginsenoside Rh2 NULL 119307 Microarray NSCLC cell line A549 23152132 2013 down-regulated
let-7e 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) NULL 16078949 Microarray hepatocytes 23107762 2013 up-regulated
let-7e Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Doxorubicin 31703 NSC123127 approved resistant High Ovarian Cancer cell line (OV19, TOV21G, TOV112D, FUOV1, C13, OV2008, A2780CP, A2780S, IGROV1, T8, OVCAR5, IMCC3, A2008, OVCAR3, SKOV3, IOSER)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Tongue Squamous Cell Carcinoma cell line (Tca8113)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant High Colon Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer tissue and cell line (A2780)
hsa-let-7e Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Vincristine 5978 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive High Lung Adenocarcinoma cell line (A549)
hsa-let-7e Imatinib 5291 NSC743414 approved resistant High Gastrointestinal Stromal Tumor tissue
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Adenocarcinoma cell line (OE19)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer tissue and cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780, HO8910, ES2, CAOV3, SKOV3)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive Low Colorectal Cancer cell line (HCT-8)
hsa-let-7e Daunorubicin 30323 NSC82151 approved resistant High Acute Promyelocytic Leukemia cell line (HL60)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7C)
hsa-let-7e Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (PC-9)
hsa-let-7e Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Regorafenib 11167602 NSC763932 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-let-7e Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-let-7e 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-let-7e Ethanol+Tamoxifen resistant cell line (LY2)
hsa-let-7e Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-let-7e Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-let-7e Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-let-7e Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-let-7e Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-let-7e Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-let-7e-5p Alvocidib 5287969 NSC649890 resistant
hsa-let-7e-5p Ethyl, methoxy, prodigisine 135829283 NSC742418 resistant
hsa-let-7e-5p Platinum 23939 resistant Low Ovarian Cancer tissue
hsa-let-7e-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (AsPC-1)
hsa-let-7e-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-let-7e-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-let-7e-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-let-7e-5p Sunitinib 5329102 NSC750690 approved sensitive tissue (clear cell renal cell carcinoma)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-let-7e-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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