miRTarBase - #MIRT051643


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pre-miRNA Information
pre-miRNA hsa-let-7e   
Genomic Coordinates chr19: 51692786 - 51692864
Synonyms MIRNLET7E, hsa-let-7e, let-7e, MIRLET7E
Description Homo sapiens let-7e stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7e-5p
Sequence 8| UGAGGUAGGAGGUUGUAUAGUU |29
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1189776118 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CCDC97   
Synonyms -
Description coiled-coil domain containing 97
Transcript NM_052848   
Expression
Putative miRNA Targets on CCDC97
3'UTR of CCDC97
(miRNA target sites are highlighted)		 
>CCDC97|NM_052848|3'UTR
   1 TGGCCGCCACCCTTCCCACCGCCTGCCCCATCCCCATCCCCAACAAGGCAGCTGATTCCAGGCCTGCTCAGTGACCCTTT
  81 CTCTAGGGGGACATCAGGGCAGTGCCCCACAACCCACACACACCACCATCTCACTGGGTCTAGTCTCATCTCAGACAACC
 161 CCCACCCCCACTGTTTCTGGGGTTCCCTTTCTCATCTCTCCCACCCTGTCTCCTGCCTCTGTCTTTCTTGGTGTCTGTCT
 241 GGGCTTCTTTCTGTCTCTTTCTGTCTTTCTGTCTCTCTCCCTACCCCCGCTCCCTCTTTCCAGTGCTCTGGCTGGCTGTC
 321 TCTCCCTTTCTCCCCCTCTCTCTCTGCCTTAGGCTCTGTCTCCACCGCAGGGCCCAAGGTGAAAGTCCTCCCCTTGCCGG
 401 AGGCCAGCTGGCAGGGCCTTTCGTGGCTGGAAGTGGCCAGTTTGGTTCCGGTGCTGACCCCTAGGCCCCAGCGCAGCTGC
 481 CTCCCGTGCTGTCTGTCTCCCCCTCTCTGTTTATGTCTGCGCTGTGTCTCACACTCAGAGCCTCCTTGCTTCTGTTAGGT
 561 TCCCATCTCTCCTTCTGCCTCACTCTGGGCCTCTTCTTTCTACTTGTACATTTCCACCTCTCTAGGCCTCTGCTCTCACT
 641 GTCCCTCTCTGTCTGTCTCTCAGCCTTTATCTCTGGGTTTTGATCCCCCACTCCAGGCTCTGGGCCCCTTCTTCCCCCTT
 721 CCCTCAAACCTGGCTGCTATAGGCAGCAGAACCCTGACCACTGAGTAATACAGCCCCAGGGGAGGGAGGAGACCCCAGGC
 801 AGGGAGGATGGGGGCAGCTCTCTTCTCTCCCCAGGACCCAGGCTGTGGATCACGGGGCCTGCCAGCTTGAGTGTAGAGGG
 881 AGGGGGGACTCTACCCTTCTCAGCCCCACCAGCCCCCCTCTGCCCAACCACAATTTTCCCTTCCTCCGCCTTCCTCTCCC
 961 TCTCCTGTTTACACTCCCCAAATGCGCACAGGCTGTTATCATGGGTCCTGAGTCATCCCACACACAGCCTGCCCCAGCGT
1041 CCCTGCCCCCAGCTGGCCGCAGGGCCCGCCCCATGGAGCCCCCTGCCGCCCTGGGCTAATGGGAGCCAGATGGCCGCCTG
1121 GTGACTCAGCCACCGGGCCTGTGGGAACCCAGGCGTCCCGCCTTCCCATGCCCCCACACCCGGCTCCTGCTCCCCCAGCA
1201 GACACACACAGGAGGGCCTGGCCACTGTTGAGGGGGCACACAGGGCAAGGGTCACCAAGTCGGGGCCTAGGGACTCCTCA
1281 TGCCTCTGAGATGGAATGGTGGTATCCTGCCGTGGCCAAGCCTGAAGGACCCTCAAAACTGCCTCCTGGAGTCCACGGTT
1361 CCTGACCTCCGAGCCTCAGCTATGCCCTCTGGGTCAACCAGAATTAGAGCCAGACAGGGAAAGTGAGAGCTGGATGGAGG
1441 CAGACAAGATGCTCAGAGCGACTATTAAAGAACGAAAGCCTCTGCTACGGAGCGCTTCTGTCCTCTGTCAGGCCCGAGCG
1521 AAGTGCCTGACACCGGGTTGGATCCTCAGATGGCCCCATGAACTAGTGAAGTGGGTCAAAGGAGGCCTGGAAAGATGTTG
1601 CTTCCTCAAGGCCACTCGGCCATCAGAGGCAGAAATGAAACAGGAACCCAGGCCTAGAATCACAAAGGTCCTAGAAACCA
1681 CTTGGCTGTCTGGCCTCTCAGGTGTCAGGGCCATCCAGAGTGAGACAGCATTGGAGGGACAAGTGTGCATGCAGATGTCC
1761 TCAGACGGGAAGGTTTGAGAAGGGTCAGATGGTAGGCGGGCCTAACAAGGGCTCCGTGCTAGCCACTGTCCCGCACACAG
1841 ACAGGATCAGGTCATCTTGATATGGAGATCAGTCCCCAAATCACTGAATTGTCCCAGCAGTGCTATGCCCTAGGTACTAC
1921 CAATATCACTCCTCTATTTCCCAGAGGAGGAAGCAGCAGCTAGACTCCAGGACCTTGGGGTCATATCTCTCAGAAAGCCA
2001 AGAGTGCAGGATGAGAGCTGTCTGTCTCTTACCTGCCTGTATTTGTGCCCCATTTTTAAAGAGCAGAGGGCCTGGGCCAC
2081 AGGAAAGGTATCAGCCCTTGGTGATAGGCACATTTTTTACCAGTCTATCATTTGGTCATTAAATTTGTTTACAATATACT
2161 TTGCTATAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuGAUAUGUUGGAGGAUGGAGu 5'
            | |  | ::|||||:|||| 
Target 5' tcCCACCCTGTCTCCTGCCTCt 3'
 199 - 220 144.00 -18.40
2 
miRNA  3' uuGAUAUGUUGGAGGAUGGAGu 5'
            | || :  |||:||:|||| 
Target 5' tcCCATCTCTCCTTCTGCCTCa 3'
 561 - 582 144.00 -19.60
3 
miRNA  3' uuGAUAUGUU-GGAG----GAUGGAGu 5'
            ||: | :| ||||    ||:|||| 
Target 5' gcCTGAAGGACCCTCAAAACTGCCTCc 3'
 1320 - 1346 138.00 -14.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30541557 4 COSMIC
COSN19732160 7 COSMIC
COSN31579552 22 COSMIC
COSN26553258 26 COSMIC
COSN30538247 33 COSMIC
COSN30462696 35 COSMIC
COSN30473339 36 COSMIC
COSN31603851 57 COSMIC
COSN30464051 96 COSMIC
COSN20052118 103 COSMIC
COSN31610570 170 COSMIC
COSN20276570 357 COSMIC
COSN22645726 673 COSMIC
COSN15277049 772 COSMIC
COSN28713434 783 COSMIC
COSN28645135 893 COSMIC
COSN28710114 962 COSMIC
COSN9357780 1060 COSMIC
COSN9357781 1073 COSMIC
COSN31590728 1100 COSMIC
COSN28820995 1179 COSMIC
COSN25558738 1218 COSMIC
COSN20120050 1287 COSMIC
COSN26373921 1536 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs777851784 4 dbSNP
rs759462851 6 dbSNP
rs199680363 7 dbSNP
rs1388868150 9 dbSNP
rs752750383 12 dbSNP
rs1233048213 13 dbSNP
rs1324323768 19 dbSNP
rs1287420674 20 dbSNP
rs965597238 21 dbSNP
rs542895800 22 dbSNP
rs751479378 26 dbSNP
rs1341265522 27 dbSNP
rs1227901370 28 dbSNP
rs1252778441 29 dbSNP
rs1353856970 34 dbSNP
rs201969844 36 dbSNP
rs770599455 37 dbSNP
rs757455717 39 dbSNP
rs1187303837 40 dbSNP
rs115799186 44 dbSNP
rs750453601 47 dbSNP
rs758537007 53 dbSNP
rs374173286 59 dbSNP
rs564604249 63 dbSNP
rs532060865 70 dbSNP
rs1222378489 72 dbSNP
rs187996888 76 dbSNP
rs1019888233 77 dbSNP
rs913609661 78 dbSNP
rs560311858 82 dbSNP
rs1319078697 89 dbSNP
rs528017291 90 dbSNP
rs981773743 96 dbSNP
rs1219131320 99 dbSNP
rs964002825 100 dbSNP
rs1361854311 105 dbSNP
rs1269149993 106 dbSNP
rs1436535078 116 dbSNP
rs996849608 117 dbSNP
rs1482841416 118 dbSNP
rs745780216 122 dbSNP
rs1460556388 127 dbSNP
rs1258107009 128 dbSNP
rs763788850 133 dbSNP
rs371298760 134 dbSNP
rs927890699 136 dbSNP
rs1418698367 138 dbSNP
rs3810173 141 dbSNP
rs1421120027 144 dbSNP
rs143835604 154 dbSNP
rs538212877 159 dbSNP
rs920443756 159 dbSNP
rs1213306625 165 dbSNP
rs1458341693 166 dbSNP
rs1346155367 167 dbSNP
rs1202862638 168 dbSNP
rs79896976 180 dbSNP
rs1279926273 183 dbSNP
rs1301474846 185 dbSNP
rs1221387926 187 dbSNP
rs1048966394 189 dbSNP
rs1381921853 190 dbSNP
rs1439723381 192 dbSNP
rs1377161949 194 dbSNP
rs981285002 205 dbSNP
rs192497317 206 dbSNP
rs1353906470 209 dbSNP
rs1176749028 218 dbSNP
rs1397146580 218 dbSNP
rs1416038761 218 dbSNP
rs1308595094 226 dbSNP
rs1393367844 228 dbSNP
rs1193074741 232 dbSNP
rs928552991 236 dbSNP
rs539115720 238 dbSNP
rs1440622648 241 dbSNP
rs1240230427 246 dbSNP
rs1175899750 250 dbSNP
rs937292604 252 dbSNP
rs1055854062 255 dbSNP
rs575154909 256 dbSNP
rs1346268665 258 dbSNP
rs1277645470 260 dbSNP
rs1232918255 261 dbSNP
rs1242578925 264 dbSNP
rs764002550 268 dbSNP
rs914265896 272 dbSNP
rs185328033 274 dbSNP
rs947099714 281 dbSNP
rs1372357188 287 dbSNP
rs572164010 289 dbSNP
rs903315690 290 dbSNP
rs1166362146 291 dbSNP
rs1008405138 295 dbSNP
rs901460757 300 dbSNP
rs1257578781 301 dbSNP
rs1420362552 312 dbSNP
rs1041276291 315 dbSNP
rs1382198350 318 dbSNP
rs900079017 321 dbSNP
rs1418654845 326 dbSNP
rs1183949126 336 dbSNP
rs1257320130 336 dbSNP
rs1485013652 336 dbSNP
rs1197991954 337 dbSNP
rs1261905513 357 dbSNP
rs997066054 357 dbSNP
rs189816469 363 dbSNP
rs997130750 364 dbSNP
rs1234872383 365 dbSNP
rs958447733 365 dbSNP
rs554818238 367 dbSNP
rs748398205 368 dbSNP
rs559247512 371 dbSNP
rs1178850771 374 dbSNP
rs575962614 385 dbSNP
rs1423960215 388 dbSNP
rs1021164280 390 dbSNP
rs577212926 399 dbSNP
rs1015681879 400 dbSNP
rs970825016 409 dbSNP
rs761146601 411 dbSNP
rs544269170 413 dbSNP
rs1195069440 414 dbSNP
rs543439351 423 dbSNP
rs958595502 424 dbSNP
rs991148433 431 dbSNP
rs1485363887 434 dbSNP
rs1265641782 440 dbSNP
rs1215127497 442 dbSNP
rs373940297 445 dbSNP
rs930507600 446 dbSNP
rs564516299 450 dbSNP
rs576575684 451 dbSNP
rs1381682619 453 dbSNP
rs1391780756 459 dbSNP
rs35587298 464 dbSNP
rs914191251 467 dbSNP
rs532597957 468 dbSNP
rs947078056 473 dbSNP
rs1460033061 474 dbSNP
rs1367128404 484 dbSNP
rs778955834 486 dbSNP
rs924356396 487 dbSNP
rs1371817830 488 dbSNP
rs1312603523 489 dbSNP
rs1190461742 498 dbSNP
rs1217932381 500 dbSNP
rs1041078896 503 dbSNP
rs943805378 504 dbSNP
rs901198753 508 dbSNP
rs1272379569 509 dbSNP
rs1198654790 510 dbSNP
rs540719671 512 dbSNP
rs1245646835 515 dbSNP
rs1487288360 517 dbSNP
rs1192606263 519 dbSNP
rs1249518936 519 dbSNP
rs560324356 521 dbSNP
rs527839968 522 dbSNP
rs932873495 523 dbSNP
rs1011517611 525 dbSNP
rs1422021530 537 dbSNP
rs372300436 542 dbSNP
rs1329571060 543 dbSNP
rs1167878525 553 dbSNP
rs1466944605 558 dbSNP
rs1349424913 559 dbSNP
rs888411448 564 dbSNP
rs1004214759 568 dbSNP
rs776598094 572 dbSNP
rs1003312795 575 dbSNP
rs1251954230 580 dbSNP
rs1182313372 584 dbSNP
rs1439361599 587 dbSNP
rs777257819 597 dbSNP
rs192961107 598 dbSNP
rs759966809 603 dbSNP
rs1345615364 604 dbSNP
rs146330354 607 dbSNP
rs1399103829 614 dbSNP
rs1232146820 616 dbSNP
rs1276075963 619 dbSNP
rs1310294626 629 dbSNP
rs1034728917 639 dbSNP
rs1334360051 641 dbSNP
rs1003605148 643 dbSNP
rs1219225151 645 dbSNP
rs1377791770 648 dbSNP
rs371846519 648 dbSNP
rs959035375 648 dbSNP
rs1319470576 650 dbSNP
rs990493003 654 dbSNP
rs1223290423 656 dbSNP
rs139650824 660 dbSNP
rs1246867935 689 dbSNP
rs2241720 690 dbSNP
rs983717790 691 dbSNP
rs1193341086 695 dbSNP
rs1208585102 715 dbSNP
rs1261514074 717 dbSNP
rs1479078963 718 dbSNP
rs1225699326 719 dbSNP
rs1348791894 721 dbSNP
rs1279407015 723 dbSNP
rs1245944901 726 dbSNP
rs539141855 741 dbSNP
rs958543407 748 dbSNP
rs991779657 755 dbSNP
rs1403734677 757 dbSNP
rs1374321849 761 dbSNP
rs1318338951 773 dbSNP
rs1412875479 781 dbSNP
rs34327670 784 dbSNP
rs1021542322 799 dbSNP
rs969082420 801 dbSNP
rs1402155729 802 dbSNP
rs944516991 805 dbSNP
rs976806191 809 dbSNP
rs1419710029 810 dbSNP
rs1475428329 810 dbSNP
rs547862675 811 dbSNP
rs1366355691 812 dbSNP
rs1419362990 815 dbSNP
rs1296090777 817 dbSNP
rs932675938 818 dbSNP
rs565757061 823 dbSNP
rs1292659972 829 dbSNP
rs1431380964 831 dbSNP
rs924304081 832 dbSNP
rs1214499698 835 dbSNP
rs75820821 838 dbSNP
rs1291741851 848 dbSNP
rs1233220079 854 dbSNP
rs976517392 855 dbSNP
rs921404220 859 dbSNP
rs1291907160 863 dbSNP
rs902686491 870 dbSNP
rs1324127060 872 dbSNP
rs1214065356 878 dbSNP
rs1284288655 879 dbSNP
rs1489515427 882 dbSNP
rs35525566 882 dbSNP
rs1003680964 883 dbSNP
rs1194505807 884 dbSNP
rs1396430219 887 dbSNP
rs1034801672 888 dbSNP
rs1472098892 892 dbSNP
rs554451209 893 dbSNP
rs1000226840 894 dbSNP
rs576314327 896 dbSNP
rs1188407095 897 dbSNP
rs1183634787 902 dbSNP
rs1474480641 911 dbSNP
rs1241549601 913 dbSNP
rs778067391 913 dbSNP
rs879175263 913 dbSNP
rs1012348816 914 dbSNP
rs1049078021 915 dbSNP
rs1027309327 916 dbSNP
rs536944787 918 dbSNP
rs1275752041 919 dbSNP
rs1359261101 919 dbSNP
rs940294948 919 dbSNP
rs1419295355 920 dbSNP
rs1157152632 921 dbSNP
rs558171088 925 dbSNP
rs906561056 934 dbSNP
rs1003552705 941 dbSNP
rs1401013170 944 dbSNP
rs576388967 948 dbSNP
rs1439863029 955 dbSNP
rs965857163 956 dbSNP
rs1172484796 961 dbSNP
rs2241719 962 dbSNP
rs1450149509 971 dbSNP
rs922714789 986 dbSNP
rs2241718 987 dbSNP
rs1193192434 997 dbSNP
rs528233395 1002 dbSNP
rs915265281 1010 dbSNP
rs946670880 1011 dbSNP
rs757133509 1013 dbSNP
rs1237505830 1019 dbSNP
rs1042671193 1020 dbSNP
rs1349660225 1028 dbSNP
rs968653486 1029 dbSNP
rs1218237346 1034 dbSNP
rs1350962808 1039 dbSNP
rs977766846 1040 dbSNP
rs939539464 1043 dbSNP
rs1278398490 1044 dbSNP
rs1441142089 1046 dbSNP
rs1313614906 1050 dbSNP
rs1206166639 1052 dbSNP
rs1436687974 1054 dbSNP
rs1243818811 1057 dbSNP
rs1393308181 1058 dbSNP
rs1031319408 1059 dbSNP
rs572570631 1060 dbSNP
rs1176871114 1062 dbSNP
rs1175846229 1063 dbSNP
rs775527469 1068 dbSNP
rs976464903 1068 dbSNP
rs184612357 1069 dbSNP
rs561305681 1072 dbSNP
rs9282870 1074 dbSNP
rs910063175 1075 dbSNP
rs1317121538 1079 dbSNP
rs1004469104 1080 dbSNP
rs879917179 1081 dbSNP
rs748984751 1084 dbSNP
rs188484237 1088 dbSNP
rs1037256809 1089 dbSNP
rs1028840732 1094 dbSNP
rs1302325060 1097 dbSNP
rs1454565467 1103 dbSNP
rs1347154977 1106 dbSNP
rs756059435 1107 dbSNP
rs985567308 1112 dbSNP
rs915278590 1113 dbSNP
rs1190696822 1116 dbSNP
rs968110058 1117 dbSNP
rs978085837 1134 dbSNP
rs180951246 1135 dbSNP
rs532519657 1136 dbSNP
rs1274596935 1142 dbSNP
rs1262148615 1143 dbSNP
rs1213163970 1149 dbSNP
rs1328231090 1150 dbSNP
rs1056700007 1155 dbSNP
rs916773029 1156 dbSNP
rs1225874915 1161 dbSNP
rs1264236208 1166 dbSNP
rs547925693 1171 dbSNP
rs948179569 1172 dbSNP
rs1364106812 1174 dbSNP
rs1287364017 1180 dbSNP
rs566197408 1182 dbSNP
rs1457712731 1183 dbSNP
rs1048809740 1184 dbSNP
rs1055085616 1185 dbSNP
rs1252780992 1187 dbSNP
rs895225812 1190 dbSNP
rs1428628303 1193 dbSNP
rs530113609 1197 dbSNP
rs116785413 1200 dbSNP
rs1184420684 1202 dbSNP
rs1375720107 1202 dbSNP
rs547592032 1202 dbSNP
rs1253470210 1206 dbSNP
rs1215304701 1219 dbSNP
rs1332652730 1223 dbSNP
rs1264818539 1229 dbSNP
rs1228011681 1231 dbSNP
rs1035975995 1232 dbSNP
rs1293445928 1233 dbSNP
rs1434718600 1235 dbSNP
rs1371996408 1238 dbSNP
rs1328392441 1240 dbSNP
rs901489981 1244 dbSNP
rs1478923052 1252 dbSNP
rs1176907383 1262 dbSNP
rs1422752722 1263 dbSNP
rs1463928944 1265 dbSNP
rs1374353601 1272 dbSNP
rs1166173141 1277 dbSNP
rs1448546868 1278 dbSNP
rs144441501 1284 dbSNP
rs1195060849 1285 dbSNP
rs1466993353 1286 dbSNP
rs1266323105 1293 dbSNP
rs144300220 1312 dbSNP
rs904375390 1313 dbSNP
rs748202020 1350 dbSNP
rs1385870906 1351 dbSNP
rs1321240703 1352 dbSNP
rs536957439 1357 dbSNP
rs768542516 1358 dbSNP
rs558383992 1371 dbSNP
rs997843733 1372 dbSNP
rs1394934885 1375 dbSNP
rs1305699668 1381 dbSNP
rs1317788992 1382 dbSNP
rs1395123472 1382 dbSNP
rs968107563 1382 dbSNP
rs1217386706 1384 dbSNP
rs371928610 1384 dbSNP
rs1253116984 1386 dbSNP
rs11555004 1389 dbSNP
rs1028435556 1391 dbSNP
rs953801872 1412 dbSNP
rs1182252691 1414 dbSNP
rs984295347 1416 dbSNP
rs1249499788 1418 dbSNP
rs1204289967 1423 dbSNP
rs1486043314 1425 dbSNP
rs1282493118 1434 dbSNP
rs1209070018 1436 dbSNP
rs978115412 1441 dbSNP
rs1280552441 1442 dbSNP
rs923950614 1447 dbSNP
rs1334303427 1448 dbSNP
rs960673514 1458 dbSNP
rs992412518 1460 dbSNP
rs1351333487 1465 dbSNP
rs1265468234 1467 dbSNP
rs1375532595 1468 dbSNP
rs910021334 1474 dbSNP
rs916782142 1479 dbSNP
rs1401014464 1481 dbSNP
rs1199828933 1489 dbSNP
rs1471051462 1493 dbSNP
rs961850014 1494 dbSNP
rs772251631 1495 dbSNP
rs928215256 1508 dbSNP
rs939641511 1516 dbSNP
rs16959007 1517 dbSNP
rs1036048135 1520 dbSNP
rs901522607 1521 dbSNP
rs1207081260 1528 dbSNP
rs1348992444 1530 dbSNP
rs932956090 1532 dbSNP
rs916593940 1535 dbSNP
rs946799989 1539 dbSNP
rs1294640192 1542 dbSNP
rs889028996 1547 dbSNP
rs1304106862 1556 dbSNP
rs534286291 1557 dbSNP
rs1340338433 1580 dbSNP
rs1398693611 1603 dbSNP
rs1402027564 1617 dbSNP
rs1044213329 1618 dbSNP
rs145153226 1619 dbSNP
rs1327547752 1622 dbSNP
rs998690716 1633 dbSNP
rs1021865544 1636 dbSNP
rs1052979315 1638 dbSNP
rs1244075732 1642 dbSNP
rs1263791356 1645 dbSNP
rs574505776 1661 dbSNP
rs1472529251 1662 dbSNP
rs901076611 1666 dbSNP
rs540141804 1670 dbSNP
rs998125463 1672 dbSNP
rs1223568916 1686 dbSNP
rs541560701 1690 dbSNP
rs1027963987 1700 dbSNP
rs555187314 1707 dbSNP
rs1228210178 1718 dbSNP
rs1031053309 1727 dbSNP
rs1432545878 1738 dbSNP
rs953856069 1751 dbSNP
rs1362542482 1753 dbSNP
rs747188858 1759 dbSNP
rs992558122 1761 dbSNP
rs1396363488 1763 dbSNP
rs1262262021 1767 dbSNP
rs1023926377 1768 dbSNP
rs1420386095 1769 dbSNP
rs1423206108 1774 dbSNP
rs1017096623 1790 dbSNP
rs185069483 1798 dbSNP
rs961148006 1799 dbSNP
rs970025284 1806 dbSNP
rs1444831098 1808 dbSNP
rs985004367 1809 dbSNP
rs1221557118 1812 dbSNP
rs771327551 1816 dbSNP
rs11668308 1817 dbSNP
rs1339390572 1822 dbSNP
rs1296461356 1823 dbSNP
rs971797545 1831 dbSNP
rs1372931782 1832 dbSNP
rs960928898 1833 dbSNP
rs1418195972 1834 dbSNP
rs116628885 1836 dbSNP
rs781465010 1837 dbSNP
rs142205256 1840 dbSNP
rs1427928961 1846 dbSNP
rs541463448 1849 dbSNP
rs1455699682 1851 dbSNP
rs979501870 1860 dbSNP
rs550291765 1861 dbSNP
rs1190948056 1862 dbSNP
rs889069343 1864 dbSNP
rs546010793 1870 dbSNP
rs1481792259 1872 dbSNP
rs775943755 1876 dbSNP
rs903021133 1879 dbSNP
rs11555003 1882 dbSNP
rs559484704 1883 dbSNP
rs1211233974 1890 dbSNP
rs935430940 1892 dbSNP
rs79057735 1901 dbSNP
rs568962226 1905 dbSNP
rs1290170064 1910 dbSNP
rs1024041657 1911 dbSNP
rs1261113227 1913 dbSNP
rs1370041160 1914 dbSNP
rs1489188136 1918 dbSNP
rs901024071 1921 dbSNP
rs1198698822 1923 dbSNP
rs1016439691 1924 dbSNP
rs933865836 1931 dbSNP
rs1050114764 1933 dbSNP
rs889419023 1937 dbSNP
rs1005624831 1941 dbSNP
rs1016632140 1946 dbSNP
rs1484055652 1947 dbSNP
rs1253900806 1950 dbSNP
rs933053453 1976 dbSNP
rs1317298114 1986 dbSNP
rs6957 1987 dbSNP
rs910227618 1988 dbSNP
rs1349765353 2006 dbSNP
rs1294036791 2011 dbSNP
rs1397884847 2011 dbSNP
rs983172275 2014 dbSNP
rs548266304 2017 dbSNP
rs147793830 2018 dbSNP
rs569836890 2025 dbSNP
rs1391364498 2029 dbSNP
rs1364788284 2033 dbSNP
rs538176442 2037 dbSNP
rs1457211183 2039 dbSNP
rs530592688 2040 dbSNP
rs1043002879 2044 dbSNP
rs1425068695 2050 dbSNP
rs552070122 2052 dbSNP
rs1253376982 2057 dbSNP
rs751294065 2064 dbSNP
rs924514663 2074 dbSNP
rs934519061 2079 dbSNP
rs991054340 2080 dbSNP
rs570449756 2081 dbSNP
rs36082857 2084 dbSNP
rs1335399795 2087 dbSNP
rs1024311376 2089 dbSNP
rs968368891 2093 dbSNP
rs1312083963 2096 dbSNP
rs1383059102 2097 dbSNP
rs979834136 2102 dbSNP
rs1367577908 2109 dbSNP
rs11304 2124 dbSNP
rs1408956869 2126 dbSNP
rs923961934 2128 dbSNP
rs534585574 2131 dbSNP
rs189479725 2133 dbSNP
rs1395618644 2138 dbSNP
rs1014098413 2145 dbSNP
rs935380084 2147 dbSNP
rs1330802352 2148 dbSNP
rs1045118634 2153 dbSNP
rs1163453749 2154 dbSNP
rs1428798915 2155 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site 3'UTR
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
LIHC 0.384 0 0.453 0 49 Click to see details
BRCA -0.254 0.01 -0.255 0.01 84 Click to see details
KICH -0.445 0.01 -0.412 0.02 25 Click to see details
THCA 0.251 0.03 0.176 0.09 59 Click to see details
BLCA 0.414 0.04 -0.044 0.43 18 Click to see details
CHOL 0.528 0.07 0.817 0 9 Click to see details
CESC 0.913 0.13 0.500 0.33 3 Click to see details
PAAD -0.676 0.16 -0.400 0.3 4 Click to see details
LUSC 0.16 0.17 0.106 0.26 38 Click to see details
UCEC 0.212 0.19 0.330 0.08 19 Click to see details
KIRP -0.154 0.2 -0.155 0.2 32 Click to see details
PCPG 0.742 0.23 0.500 0.33 3 Click to see details
PRAD 0.1 0.24 0.109 0.23 50 Click to see details
HNSC -0.103 0.26 0.098 0.27 42 Click to see details
ESCA -0.198 0.28 -0.327 0.16 11 Click to see details
COAD 0.181 0.33 0.143 0.37 8 Click to see details
LUAD 0.088 0.39 0.182 0.29 12 Click to see details
KIRC -0.022 0.43 0.004 0.49 68 Click to see details
STAD -0.029 0.44 -0.060 0.37 32 Click to see details
STAD -0.029 0.44 -0.060 0.37 32 Click to see details
STAD -0.029 0.44 -0.060 0.37 32 Click to see details
581 hsa-let-7e-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT002081 HMGA2 high mobility group AT-hook 2 5 5
MIRT003932 EIF3J eukaryotic translation initiation factor 3 subunit J 2 1
MIRT004469 SMC1A structural maintenance of chromosomes 1A 4 7
MIRT005718 WNT1 Wnt family member 1 4 1
MIRT006122 CCND1 cyclin D1 5 4
MIRT006404 MPL MPL proto-oncogene, thrombopoietin receptor 1 1
MIRT032098 RABGAP1L RAB GTPase activating protein 1 like 1 1
MIRT032099 DAD1 defender against cell death 1 1 1
MIRT032100 MYCN MYCN proto-oncogene, bHLH transcription factor 4 2
MIRT051413 WDR67 TBC1 domain family member 31 1 1
MIRT051414 FAM219B family with sequence similarity 219 member B 1 1
MIRT051415 C11orf91 chromosome 11 open reading frame 91 1 1
MIRT051416 CENPP centromere protein P 1 1
MIRT051417 TMEM107 transmembrane protein 107 1 1
MIRT051418 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT051419 DAAM1 dishevelled associated activator of morphogenesis 1 1 1
MIRT051420 DGCR8 DGCR8, microprocessor complex subunit 1 1
MIRT051421 RAP1A RAP1A, member of RAS oncogene family 1 1
MIRT051422 RPA1 replication protein A1 1 1
MIRT051423 SKIV2L Ski2 like RNA helicase 1 1
MIRT051424 AGO1 argonaute 1, RISC catalytic component 4 2
MIRT051425 RPS27 ribosomal protein S27 1 1
MIRT051426 ARNT2 aryl hydrocarbon receptor nuclear translocator 2 1 1
MIRT051427 GPM6B glycoprotein M6B 1 1
MIRT051428 TTLL12 tubulin tyrosine ligase like 12 1 1
MIRT051429 HIST2H2BF histone cluster 2 H2B family member f 1 1
MIRT051430 CELF2 CUGBP Elav-like family member 2 1 1
MIRT051431 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT051432 VPS13D vacuolar protein sorting 13 homolog D 1 1
MIRT051433 RPL10 ribosomal protein L10 1 1
MIRT051434 SPCS2 signal peptidase complex subunit 2 1 1
MIRT051435 DCAF8 DDB1 and CUL4 associated factor 8 1 1
MIRT051436 CTC1 CST telomere replication complex component 1 1 1
MIRT051437 NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit 1 1
MIRT051438 PHF3 PHD finger protein 3 1 1
MIRT051439 TUBA1B tubulin alpha 1b 1 1
MIRT051440 SHANK1 SH3 and multiple ankyrin repeat domains 1 1 1
MIRT051441 SKA2 spindle and kinetochore associated complex subunit 2 1 1
MIRT051442 SPTBN1 spectrin beta, non-erythrocytic 1 1 1
MIRT051443 ND2 MTND2 1 1
MIRT051444 MED13L mediator complex subunit 13 like 1 1
MIRT051445 RCOR3 REST corepressor 3 1 1
MIRT051446 MACF1 microtubule-actin crosslinking factor 1 1 1
MIRT051447 RDX radixin 2 5
MIRT051448 PCBP2 poly(rC) binding protein 2 1 1
MIRT051449 UBAP2L ubiquitin associated protein 2 like 1 1
MIRT051450 CDCA3 cell division cycle associated 3 1 1
MIRT051451 CABLES1 Cdk5 and Abl enzyme substrate 1 1 1
MIRT051452 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 1
MIRT051453 C12orf49 chromosome 12 open reading frame 49 1 1
MIRT051454 TIMP3 TIMP metallopeptidase inhibitor 3 1 1
MIRT051455 WBSCR16 RCC1 like 1 1
MIRT051456 SLC2A11 solute carrier family 2 member 11 1 1
MIRT051457 NF1 neurofibromin 1 1 1
MIRT051458 LRRC8A leucine rich repeat containing 8 VRAC subunit A 1 1
MIRT051459 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT051460 DTNB dystrobrevin beta 1 1
MIRT051461 SCMH1 Scm polycomb group protein homolog 1 1 1
MIRT051462 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT051463 RHBDD2 rhomboid domain containing 2 1 1
MIRT051464 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT051465 NDST1 N-deacetylase and N-sulfotransferase 1 1 1
MIRT051466 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 5
MIRT051467 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT051468 BAHCC1 BAH domain and coiled-coil containing 1 1 1
MIRT051469 CARM1 coactivator associated arginine methyltransferase 1 1 1
MIRT051470 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT051471 ND3 NADH dehydrogenase, subunit 3 (complex I) 1 1
MIRT051472 PIGS phosphatidylinositol glycan anchor biosynthesis class S 1 1
MIRT051473 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT051474 RPN2 ribophorin II 1 1
MIRT051475 RPL12 ribosomal protein L12 1 1
MIRT051476 NME4 NME/NM23 nucleoside diphosphate kinase 4 1 1
MIRT051477 IVD isovaleryl-CoA dehydrogenase 1 1
MIRT051478 JAZF1 JAZF zinc finger 1 1 1
MIRT051479 ND4 NADH dehydrogenase, subunit 4 (complex I) 1 1
MIRT051480 VARS valyl-tRNA synthetase 1 1
MIRT051481 RNF26 ring finger protein 26 1 1
MIRT051482 LHFPL2 LHFPL tetraspan subfamily member 2 1 1
MIRT051483 ARCN1 archain 1 1 1
MIRT051484 COX1 cytochrome c oxidase subunit I 1 1
MIRT051485 SLC12A4 solute carrier family 12 member 4 1 1
MIRT051486 AEBP2 AE binding protein 2 1 1
MIRT051487 PET112 glutamyl-tRNA amidotransferase subunit B 1 1
MIRT051488 UROC1 urocanate hydratase 1 1 1
MIRT051489 IGF1R insulin like growth factor 1 receptor 5 10
MIRT051490 BSDC1 BSD domain containing 1 1 1
MIRT051491 PTK2 protein tyrosine kinase 2 1 1
MIRT051492 CDC5L cell division cycle 5 like 1 1
MIRT051493 EN2 engrailed homeobox 2 1 1
MIRT051494 SSB Sjogren syndrome antigen B 1 1
MIRT051495 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT051496 RRAGC Ras related GTP binding C 1 1
MIRT051497 ZNF236 zinc finger protein 236 1 1
MIRT051498 SEMA4B semaphorin 4B 1 1
MIRT051499 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT051500 XIAP X-linked inhibitor of apoptosis 1 1
MIRT051501 GTF2I general transcription factor IIi 1 1
MIRT051502 JMJD1C jumonji domain containing 1C 1 1
MIRT051503 OTUD5 OTU deubiquitinase 5 1 1
MIRT051504 NOLC1 nucleolar and coiled-body phosphoprotein 1 1 1
MIRT051505 PPIG peptidylprolyl isomerase G 1 1
MIRT051506 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT051507 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 1 1
MIRT051508 VAMP2 vesicle associated membrane protein 2 1 1
MIRT051509 LSR lipolysis stimulated lipoprotein receptor 1 1
MIRT051510 KIAA0355 KIAA0355 1 1
MIRT051511 RPSA ribosomal protein SA 1 1
MIRT051512 DCAF6 DDB1 and CUL4 associated factor 6 1 1
MIRT051513 UHRF1BP1 UHRF1 binding protein 1 1 1
MIRT051514 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 1 1
MIRT051515 PIGP phosphatidylinositol glycan anchor biosynthesis class P 1 1
MIRT051516 LMLN leishmanolysin like peptidase 1 1
MIRT051517 PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 1 1
MIRT051518 HIPK1 homeodomain interacting protein kinase 1 1 1
MIRT051519 SERF2 small EDRK-rich factor 2 1 1
MIRT051520 RBM4 RNA binding motif protein 4 1 1
MIRT051521 RBM14 RNA binding motif protein 14 1 1
MIRT051522 HMGB1 high mobility group box 1 1 1
MIRT051523 GMPS guanine monophosphate synthase 1 1
MIRT051524 DIAPH1 diaphanous related formin 1 1 1
MIRT051525 STAM signal transducing adaptor molecule 1 1
MIRT051526 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT051527 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 1 1
MIRT051528 MARCH5 membrane associated ring-CH-type finger 5 1 1
MIRT051529 SQLE squalene epoxidase 1 1
MIRT051530 TIMM50 translocase of inner mitochondrial membrane 50 1 1
MIRT051531 NDUFA3 NADH:ubiquinone oxidoreductase subunit A3 1 1
MIRT051532 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 1 1
MIRT051533 NRSN2 neurensin 2 1 1
MIRT051534 SALL1 spalt like transcription factor 1 1 1
MIRT051535 COX3 cytochrome c oxidase III 1 1
MIRT051536 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT051537 SUPT4H1 SPT4 homolog, DSIF elongation factor subunit 1 1
MIRT051538 PACS2 phosphofurin acidic cluster sorting protein 2 1 1
MIRT051539 MTMR14 myotubularin related protein 14 1 1
MIRT051540 LUZP1 leucine zipper protein 1 1 1
MIRT051541 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT051542 SUZ12 SUZ12 polycomb repressive complex 2 subunit 1 1
MIRT051543 PAPD4 poly(A) RNA polymerase D4, non-canonical 1 1
MIRT051544 QSOX1 quiescin sulfhydryl oxidase 1 1 1
MIRT051545 SPATA13 spermatogenesis associated 13 1 1
MIRT051546 DHX57 DExH-box helicase 57 1 1
MIRT051547 KATNB1 katanin regulatory subunit B1 1 1
MIRT051548 COL6A1 collagen type VI alpha 1 chain 1 1
MIRT051549 DHX15 DEAH-box helicase 15 1 1
MIRT051550 MTCH2 mitochondrial carrier 2 1 1
MIRT051551 KIAA0100 KIAA0100 1 1
MIRT051552 SUGP2 SURP and G-patch domain containing 2 1 1
MIRT051553 NCLN nicalin 1 1
MIRT051554 ATXN2L ataxin 2 like 1 1
MIRT051555 CHD9 chromodomain helicase DNA binding protein 9 1 1
MIRT051556 PES1 pescadillo ribosomal biogenesis factor 1 1 1
MIRT051557 NUP155 nucleoporin 155 2 7
MIRT051558 GNG5 G protein subunit gamma 5 2 3
MIRT051559 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT051560 MTFR1 mitochondrial fission regulator 1 1 1
MIRT051561 IRS2 insulin receptor substrate 2 2 1
MIRT051562 IRS4 insulin receptor substrate 4 1 1
MIRT051563 PPP1R10 protein phosphatase 1 regulatory subunit 10 1 1
MIRT051564 ZNF284 zinc finger protein 284 1 1
MIRT051565 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 1 1
MIRT051566 SCD stearoyl-CoA desaturase 1 1
MIRT051567 FDPS farnesyl diphosphate synthase 1 1
MIRT051568 KRBOX4 KRAB box domain containing 4 1 1
MIRT051569 BRI3 brain protein I3 1 1
MIRT051570 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT051571 PYCR1 pyrroline-5-carboxylate reductase 1 1 1
MIRT051572 SMAP2 small ArfGAP2 1 1
MIRT051573 WDFY3 WD repeat and FYVE domain containing 3 1 1
MIRT051574 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT051575 SRSF2 serine and arginine rich splicing factor 2 1 1
MIRT051576 PGD phosphogluconate dehydrogenase 1 1
MIRT051577 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT051578 ZNF652 zinc finger protein 652 1 1
MIRT051579 PSMA6 proteasome subunit alpha 6 1 1
MIRT051580 SLC38A2 solute carrier family 38 member 2 1 1
MIRT051581 LRRC41 leucine rich repeat containing 41 1 1
MIRT051582 RANBP2 RAN binding protein 2 1 1
MIRT051583 SVIL supervillin 1 1
MIRT051584 CCNG1 cyclin G1 1 1
MIRT051585 ZNF256 zinc finger protein 256 1 1
MIRT051586 COPG1 coatomer protein complex subunit gamma 1 1 1
MIRT051587 PDCD11 programmed cell death 11 1 1
MIRT051588 CNBP CCHC-type zinc finger nucleic acid binding protein 1 1
MIRT051589 USP37 ubiquitin specific peptidase 37 1 1
MIRT051590 UBE2V2 ubiquitin conjugating enzyme E2 V2 1 1
MIRT051591 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT051592 LMNA lamin A/C 1 1
MIRT051593 STAT3 signal transducer and activator of transcription 3 1 1
MIRT051594 TRPV1 transient receptor potential cation channel subfamily V member 1 1 1
MIRT051595 MATR3 matrin 3 1 1
MIRT051596 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 1
MIRT051597 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 1 1
MIRT051598 WDR48 WD repeat domain 48 1 1
MIRT051599 RBM8A RNA binding motif protein 8A 1 1
MIRT051600 SCYL1 SCY1 like pseudokinase 1 1 1
MIRT051601 C19orf48 chromosome 19 open reading frame 48 1 1
MIRT051602 FOXD4L6 forkhead box D4 like 6 1 1
MIRT051603 PIGN phosphatidylinositol glycan anchor biosynthesis class N 1 1
MIRT051604 SPCS3 signal peptidase complex subunit 3 1 1
MIRT051605 TNFAIP1 TNF alpha induced protein 1 1 1
MIRT051606 MS4A10 membrane spanning 4-domains A10 1 1
MIRT051607 MSMO1 methylsterol monooxygenase 1 1 1
MIRT051608 ARID1A AT-rich interaction domain 1A 1 1
MIRT051609 NCKIPSD NCK interacting protein with SH3 domain 2 5
MIRT051610 NCBP1 nuclear cap binding protein subunit 1 1 1
MIRT051611 COX16 COX16, cytochrome c oxidase assembly homolog 1 1
MIRT051612 NUDT8 nudix hydrolase 8 1 1
MIRT051613 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT051614 TXNRD1 thioredoxin reductase 1 1 1
MIRT051615 ELMSAN1 ELM2 and Myb/SANT domain containing 1 1 1
MIRT051616 CTSA cathepsin A 1 1
MIRT051617 PRRC2A proline rich coiled-coil 2A 1 1
MIRT051618 SPAG9 sperm associated antigen 9 1 1
MIRT051619 AGMAT agmatinase 1 1
MIRT051620 NCKAP5L NCK associated protein 5 like 1 1
MIRT051621 ZFP62 ZFP62 zinc finger protein 1 1
MIRT051622 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1 1
MIRT051623 POLR3D RNA polymerase III subunit D 2 3
MIRT051624 PRPF8 pre-mRNA processing factor 8 1 1
MIRT051625 ATP6 ATP synthase F0 subunit 6 1 1
MIRT051626 ZFAND5 zinc finger AN1-type containing 5 1 1
MIRT051627 BAZ1B bromodomain adjacent to zinc finger domain 1B 1 1
MIRT051628 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT051629 BMP2K BMP2 inducible kinase 1 1
MIRT051630 SPN sialophorin 1 1
MIRT051631 PA2G4 proliferation-associated 2G4 1 1
MIRT051632 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 1
MIRT051633 TUBB4B tubulin beta 4B class IVb 1 1
MIRT051634 TRRAP transformation/transcription domain associated protein 1 1
MIRT051635 SLCO4A1 solute carrier organic anion transporter family member 4A1 1 1
MIRT051636 CCRN4L nocturnin 1 1
MIRT051637 USE1 unconventional SNARE in the ER 1 1 1
MIRT051638 STARD7 StAR related lipid transfer domain containing 7 1 1
MIRT051639 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 3
MIRT051640 CLTC clathrin heavy chain 1 1
MIRT051641 TERF1 telomeric repeat binding factor 1 1 1
MIRT051642 PAX3 paired box 3 1 1
MIRT051643 CCDC97 coiled-coil domain containing 97 1 1
MIRT051644 HLA-C major histocompatibility complex, class I, C 1 1
MIRT051645 GTPBP8 GTP binding protein 8 (putative) 1 1
MIRT051646 VGLL4 vestigial like family member 4 1 1
MIRT051647 ANKRD40 ankyrin repeat domain 40 1 1
MIRT051648 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 1 1
MIRT051649 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT051650 DSP desmoplakin 1 1
MIRT051651 UBN2 ubinuclein 2 1 1
MIRT051652 ZNF805 zinc finger protein 805 1 1
MIRT051653 RBBP4 RB binding protein 4, chromatin remodeling factor 1 1
MIRT051654 OCLN occludin 1 1
MIRT051655 CBX5 chromobox 5 2 3
MIRT051656 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT051657 MKI67 marker of proliferation Ki-67 1 1
MIRT051658 SUB1 SUB1 homolog, transcriptional regulator 1 1
MIRT051659 RSL1D1 ribosomal L1 domain containing 1 1 1
MIRT051660 SEC23IP SEC23 interacting protein 1 1
MIRT051661 RNMT RNA guanine-7 methyltransferase 1 1
MIRT051662 SGSM3 small G protein signaling modulator 3 1 1
MIRT051663 ZFP3 ZFP3 zinc finger protein 1 1
MIRT051664 GLUL glutamate-ammonia ligase 1 1
MIRT051665 POLD1 DNA polymerase delta 1, catalytic subunit 1 1
MIRT051666 WDR4 WD repeat domain 4 1 1
MIRT051667 PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 1 1
MIRT051668 RAI2 retinoic acid induced 2 1 1
MIRT051669 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 1 1
MIRT051670 UTP15 UTP15, small subunit processome component 1 1
MIRT051671 THADA THADA, armadillo repeat containing 1 1
MIRT051672 ZNF451 zinc finger protein 451 1 1
MIRT051673 CREBBP CREB binding protein 1 1
MIRT051674 ZNF770 zinc finger protein 770 1 1
MIRT051675 CLDN4 claudin 4 1 1
MIRT051676 ZKSCAN7 zinc finger with KRAB and SCAN domains 7 1 1
MIRT051677 NICN1 nicolin 1 1 1
MIRT051678 RPLP2 ribosomal protein lateral stalk subunit P2 1 1
MIRT051679 DCBLD2 discoidin, CUB and LCCL domain containing 2 1 1
MIRT051680 IRGQ immunity related GTPase Q 1 1
MIRT051681 CA5B carbonic anhydrase 5B 1 1
MIRT051682 COX14 COX14, cytochrome c oxidase assembly factor 1 1
MIRT051683 PSD3 pleckstrin and Sec7 domain containing 3 1 1
MIRT051684 RPL27A ribosomal protein L27a 1 1
MIRT051685 CWC15 CWC15 spliceosome associated protein homolog 1 1
MIRT051686 NT5DC2 5'-nucleotidase domain containing 2 1 1
MIRT051687 OR7D2 olfactory receptor family 7 subfamily D member 2 1 1
MIRT051688 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 1 1
MIRT051689 NUDT15 nudix hydrolase 15 1 1
MIRT051690 CDH18 cadherin 18 1 1
MIRT051691 FAM160B1 family with sequence similarity 160 member B1 1 1
MIRT051692 DZIP1 DAZ interacting zinc finger protein 1 1 1
MIRT051693 TDRD7 tudor domain containing 7 1 1
MIRT051694 TCF4 transcription factor 4 1 1
MIRT051695 ENSA endosulfine alpha 1 1
MIRT051696 GTF3C1 general transcription factor IIIC subunit 1 1 1
MIRT051697 TNFRSF1A TNF receptor superfamily member 1A 1 1
MIRT051698 CCDC113 coiled-coil domain containing 113 1 1
MIRT051699 MYO9B myosin IXB 1 1
MIRT051700 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 1 1
MIRT051701 PRAMEF13 PRAME family member 13 1 1
MIRT051702 PMPCA peptidase, mitochondrial processing alpha subunit 2 5
MIRT051703 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT051704 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT051705 CCDC106 coiled-coil domain containing 106 1 1
MIRT051706 CYP2B6 cytochrome P450 family 2 subfamily B member 6 1 1
MIRT051707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 3
MIRT051708 PSME4 proteasome activator subunit 4 1 1
MIRT051709 SETD1A SET domain containing 1A 1 1
MIRT054561 MMP9 matrix metallopeptidase 9 3 1
MIRT054579 IGF1 insulin like growth factor 1 3 1
MIRT063195 ADIPOR2 adiponectin receptor 2 2 2
MIRT065687 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT067399 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT068154 TXLNA taxilin alpha 2 2
MIRT068528 NHLRC3 NHL repeat containing 3 2 6
MIRT068789 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT073006 ARID3B AT-rich interaction domain 3B 2 6
MIRT076223 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT077616 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT080398 ONECUT2 one cut homeobox 2 2 2
MIRT083300 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT084976 BACH1 BTB domain and CNC homolog 1 2 2
MIRT094160 PCGF3 polycomb group ring finger 3 2 6
MIRT094460 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT095766 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT100094 ABT1 activator of basal transcription 1 2 8
MIRT112242 MDM4 MDM4, p53 regulator 2 4
MIRT118586 STK4 serine/threonine kinase 4 2 2
MIRT120921 PDE12 phosphodiesterase 12 2 8
MIRT123317 CALU calumenin 2 2
MIRT152272 TNFSF9 TNF superfamily member 9 2 2
MIRT153847 NCOA3 nuclear receptor coactivator 3 2 2
MIRT168583 HMGA1 high mobility group AT-hook 1 2 4
MIRT180603 CRY2 cryptochrome circadian clock 2 2 2
MIRT187717 SUOX sulfite oxidase 2 2
MIRT191404 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT193101 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT215720 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT218815 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT240330 UBXN2B UBX domain protein 2B 2 2
MIRT243473 TRIM71 tripartite motif containing 71 2 2
MIRT244069 EDN1 endothelin 1 2 2
MIRT252330 SALL3 spalt like transcription factor 3 2 2
MIRT255314 CDV3 CDV3 homolog 2 2
MIRT259277 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT259479 TXLNG taxilin gamma 2 2
MIRT260707 CLDN12 claudin 12 2 6
MIRT264693 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT266212 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT266626 CHTOP chromatin target of PRMT1 2 2
MIRT268839 C1ORF21 chromosome 1 open reading frame 21 2 2
MIRT294446 ZNF264 zinc finger protein 264 2 2
MIRT297013 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT297443 SLC20A1 solute carrier family 20 member 1 2 4
MIRT300037 BZW1 basic leucine zipper and W2 domains 1 2 4
MIRT300893 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT303320 MXD1 MAX dimerization protein 1 2 2
MIRT309846 NAT8L N-acetyltransferase 8 like 2 2
MIRT322428 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT324731 ACER2 alkaline ceramidase 2 2 2
MIRT402057 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437395 LIN28A lin-28 homolog A 4 1
MIRT437396 AURKB aurora kinase B 4 1
MIRT437435 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 1
MIRT438632 TNFRSF10B TNF receptor superfamily member 10b 2 1
MIRT439135 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT442020 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT445658 ATP6V1G1 ATPase H+ transporting V1 subunit G1 2 6
MIRT447136 KIF27 kinesin family member 27 2 2
MIRT448259 ZNF774 zinc finger protein 774 2 2
MIRT449005 ANKRD46 ankyrin repeat domain 46 2 2
MIRT449953 FMNL3 formin like 3 2 2
MIRT451155 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451624 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451693 C1RL complement C1r subcomponent like 2 2
MIRT452092 NUCB2 nucleobindin 2 2 2
MIRT452431 QDPR quinoid dihydropteridine reductase 2 2
MIRT452943 DISC1 disrupted in schizophrenia 1 2 2
MIRT453401 RHD Rh blood group D antigen 2 6
MIRT454164 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT454280 FXN frataxin 2 2
MIRT454539 RABL2A RAB, member of RAS oncogene family like 2A 2 2
MIRT454854 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455676 GLO1 glyoxalase I 2 2
MIRT457248 RABL2B RAB, member of RAS oncogene family like 2B 2 2
MIRT457677 ZNF587 zinc finger protein 587 2 2
MIRT457887 THEM6 thioesterase superfamily member 6 2 4
MIRT458016 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458279 FUT10 fucosyltransferase 10 2 2
MIRT459736 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT460453 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460500 FAM105A family with sequence similarity 105 member A 2 6
MIRT460938 NOA1 nitric oxide associated 1 2 4
MIRT461092 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461169 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461364 COL8A1 collagen type VIII alpha 1 chain 2 2
MIRT462382 YAE1D1 Yae1 domain containing 1 2 2
MIRT462780 ZNF8 zinc finger protein 8 2 2
MIRT463420 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463662 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT464265 VCL vinculin 2 2
MIRT465122 TSC22D2 TSC22 domain family member 2 2 4
MIRT466184 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466722 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT469102 RNF144B ring finger protein 144B 2 2
MIRT469714 RAB40C RAB40C, member RAS oncogene family 2 2
MIRT470425 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT470679 POLR2D RNA polymerase II subunit D 2 4
MIRT470861 PLXND1 plexin D1 2 2
MIRT471271 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471957 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472672 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 2 2
MIRT472739 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473134 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT473234 SMCR7L mitochondrial elongation factor 1 1 4
MIRT473828 MAP2K7 mitogen-activated protein kinase kinase 7 2 2
MIRT473940 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT474022 LRRC20 leucine rich repeat containing 20 2 2
MIRT474502 KLHDC8B kelch domain containing 8B 2 2
MIRT474766 KIAA0930 KIAA0930 2 2
MIRT474905 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT475331 IFNLR1 interferon lambda receptor 1 2 2
MIRT475379 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT475733 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT476548 GABPB1 GA binding protein transcription factor beta subunit 1 2 4
MIRT476973 FAM83G family with sequence similarity 83 member G 2 4
MIRT477534 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 2 4
MIRT477682 EFHD2 EF-hand domain family member D2 2 2
MIRT481201 ATXN7L3B ataxin 7 like 3B 2 4
MIRT481241 ATXN7L3 ataxin 7 like 3 2 2
MIRT481363 ATG9A autophagy related 9A 2 2
MIRT481388 ATG12 autophagy related 12 2 2
MIRT481652 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT481851 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT482184 AHR aryl hydrocarbon receptor 2 2
MIRT482220 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT485296 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT486659 ZNF28 zinc finger protein 28 2 2
MIRT489413 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491867 ZBTB5 zinc finger and BTB domain containing 5 2 8
MIRT492216 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492626 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT493323 LIMD2 LIM domain containing 2 2 2
MIRT493901 FAM43A family with sequence similarity 43 member A 2 4
MIRT494263 CEP120 centrosomal protein 120 2 2
MIRT494687 ARID3A AT-rich interaction domain 3A 2 2
MIRT495968 TBC1D19 TBC1 domain family member 19 2 2
MIRT496111 SNX17 sorting nexin 17 2 2
MIRT497875 SLC12A7 solute carrier family 12 member 7 2 2
MIRT498122 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT499405 PLCG2 phospholipase C gamma 2 2 4
MIRT499493 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 2
MIRT499653 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 2 2
MIRT499942 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT499997 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT500819 THBS1 thrombospondin 1 2 3
MIRT500902 STRN striatin 2 4
MIRT501118 SLC5A6 solute carrier family 5 member 6 2 4
MIRT501173 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT501241 SEMA4C semaphorin 4C 2 6
MIRT501328 RNFT1 ring finger protein, transmembrane 1 2 2
MIRT501355 RNF44 ring finger protein 44 2 4
MIRT501387 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT501441 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT501759 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501943 MBD2 methyl-CpG binding domain protein 2 2 8
MIRT502106 KPNA5 karyopherin subunit alpha 5 2 8
MIRT502130 KMT2D lysine methyltransferase 2D 2 4
MIRT502784 CEP135 centrosomal protein 135 2 2
MIRT502845 CELF1 CUGBP Elav-like family member 1 2 2
MIRT504789 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT505017 ZNF644 zinc finger protein 644 2 2
MIRT506942 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT507252 FIGN fidgetin, microtubule severing factor 2 8
MIRT507694 COIL coilin 2 6
MIRT508401 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508665 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT508932 AK4 adenylate kinase 4 2 4
MIRT510395 ZNF566 zinc finger protein 566 2 6
MIRT510518 YOD1 YOD1 deubiquitinase 2 6
MIRT511386 IKZF3 IKAROS family zinc finger 3 2 4
MIRT512745 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT515954 C9orf156 tRNA methyltransferase O 2 2
MIRT516083 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT523619 FZD9 frizzled class receptor 9 2 4
MIRT523733 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523990 DVL3 dishevelled segment polarity protein 3 2 2
MIRT524113 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT525727 SOD2 superoxide dismutase 2 2 2
MIRT527763 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT529727 OPRL1 opioid related nociceptin receptor 1 2 2
MIRT533187 WASL Wiskott-Aldrich syndrome like 2 6
MIRT536378 LEFTY1 left-right determination factor 1 2 2
MIRT543785 RBM12B RNA binding motif protein 12B 2 4
MIRT543868 SLC16A9 solute carrier family 16 member 9 2 2
MIRT545387 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545890 ZNF200 zinc finger protein 200 2 4
MIRT546334 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547373 MSI2 musashi RNA binding protein 2 2 2
MIRT547579 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548264 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT548351 EPHA4 EPH receptor A4 2 2
MIRT548534 DUSP1 dual specificity phosphatase 1 2 2
MIRT548560 DNAL1 dynein axonemal light chain 1 2 2
MIRT548779 COLEC12 collectin subfamily member 12 2 2
MIRT548978 CCNT2 cyclin T2 2 2
MIRT549208 BEND4 BEN domain containing 4 2 4
MIRT549763 ZNF611 zinc finger protein 611 2 6
MIRT549799 KIAA0391 KIAA0391 2 2
MIRT549847 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 2
MIRT550898 ACTA1 actin, alpha 1, skeletal muscle 2 2
MIRT551283 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551318 GSG2 histone H3 associated protein kinase 2 6
MIRT551932 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552003 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT552410 ZNF460 zinc finger protein 460 2 4
MIRT553013 USP38 ubiquitin specific peptidase 38 2 2
MIRT555550 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT555711 PDZD8 PDZ domain containing 8 2 2
MIRT557372 HAND1 heart and neural crest derivatives expressed 1 2 2
MIRT557960 FAM222B family with sequence similarity 222 member B 2 2
MIRT559087 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559497 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT561772 PEG10 paternally expressed 10 2 2
MIRT564402 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT565443 SURF4 surfeit 4 2 2
MIRT566518 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT567715 E2F6 E2F transcription factor 6 2 2
MIRT568655 ABHD17C abhydrolase domain containing 17C 2 2
MIRT569498 THYN1 thymocyte nuclear protein 1 2 2
MIRT573820 TGOLN2 trans-golgi network protein 2 2 2
MIRT574363 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT574750 GOLGA4 golgin A4 2 2
MIRT574788 FAM104A family with sequence similarity 104 member A 2 2
MIRT576089 Poteg POTE ankyrin domain family, member G 2 2
MIRT576812 Thbs1 thrombospondin 1 2 3
MIRT616370 RWDD1 RWD domain containing 1 2 2
MIRT617851 FMO4 flavin containing monooxygenase 4 2 2
MIRT642394 ZNF556 zinc finger protein 556 2 2
MIRT680519 PRIM2 DNA primase subunit 2 2 2
MIRT680547 ZNF584 zinc finger protein 584 2 2
MIRT680800 ZNF578 zinc finger protein 578 2 2
MIRT680838 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT681141 INTS7 integrator complex subunit 7 2 2
MIRT681271 RFC2 replication factor C subunit 2 2 2
MIRT681323 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT681359 BRI3BP BRI3 binding protein 2 2
MIRT681506 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681536 ZNF738 zinc finger protein 738 2 2
MIRT681658 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT681738 RAB19 RAB19, member RAS oncogene family 2 4
MIRT681797 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681869 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT681941 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682102 ITGA3 integrin subunit alpha 3 2 4
MIRT682181 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682238 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682384 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682444 MTX3 metaxin 3 2 2
MIRT682604 CPA4 carboxypeptidase A4 2 2
MIRT682640 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT689327 FPR1 formyl peptide receptor 1 2 2
MIRT689730 ATXN2 ataxin 2 2 2
MIRT691036 ZNF799 zinc finger protein 799 2 2
MIRT691935 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT694884 ZNF417 zinc finger protein 417 2 2
MIRT695255 ZNF443 zinc finger protein 443 2 2
MIRT695413 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT700589 PRSS22 protease, serine 22 2 2
MIRT701428 NHLRC2 NHL repeat containing 2 2 2
MIRT702484 KIAA1328 KIAA1328 2 2
MIRT702715 IPO9 importin 9 2 2
MIRT704028 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT704418 CTPS1 CTP synthase 1 2 2
MIRT705750 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT712373 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT713520 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT731263 FASLG Fas ligand 3 1
MIRT732697 Ccr7 chemokine (C-C motif) receptor 7 2 0
MIRT732700 Snhg12 small nucleolar RNA host gene 12 2 0
MIRT734626 SYT7 synaptotagmin 7 1 0
MIRT755829 UBQLN4 ubiquilin 4 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
let-7e Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
let-7e Hydroxamic acid HDACi LAQ824 NULL NULL Microarray breast cancer cell line SKBr3 16452179 2006 down-regulated
let-7e Doxorubicin approved 31703 Microarray ovarian cancer 19237188 2009 up-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
let-7e Etoposide approved 36462 Microarray Normal human fibroblasts (AG01522) 19633716 2009 up-regulated
let-7e Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
let-7e 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 down-regulated
let-7e Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
let-7e Marine fungal metabolite 1386A NULL NULL Microarray MCF-7 breast cancer cells. 22159329 2012 down-regulated
let-7e Ginsenoside Rh2 NULL 119307 Microarray NSCLC cell line A549 23152132 2013 down-regulated
let-7e 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) NULL 16078949 Microarray hepatocytes 23107762 2013 up-regulated
let-7e Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Doxorubicin 31703 NSC123127 approved resistant High Ovarian Cancer cell line (OV19, TOV21G, TOV112D, FUOV1, C13, OV2008, A2780CP, A2780S, IGROV1, T8, OVCAR5, IMCC3, A2008, OVCAR3, SKOV3, IOSER)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Tongue Squamous Cell Carcinoma cell line (Tca8113)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant High Colon Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer tissue and cell line (A2780)
hsa-let-7e Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Vincristine 5978 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive High Lung Adenocarcinoma cell line (A549)
hsa-let-7e Imatinib 5291 NSC743414 approved resistant High Gastrointestinal Stromal Tumor tissue
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Adenocarcinoma cell line (OE19)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer tissue and cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780, HO8910, ES2, CAOV3, SKOV3)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive Low Colorectal Cancer cell line (HCT-8)
hsa-let-7e Daunorubicin 30323 NSC82151 approved resistant High Acute Promyelocytic Leukemia cell line (HL60)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7C)
hsa-let-7e Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (PC-9)
hsa-let-7e Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Regorafenib 11167602 NSC763932 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-let-7e Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-let-7e 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-let-7e Ethanol+Tamoxifen resistant cell line (LY2)
hsa-let-7e Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-let-7e Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-let-7e Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-let-7e Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-let-7e Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-let-7e Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-let-7e-5p Alvocidib 5287969 NSC649890 resistant
hsa-let-7e-5p Ethyl, methoxy, prodigisine 135829283 NSC742418 resistant
hsa-let-7e-5p Platinum 23939 resistant Low Ovarian Cancer tissue
hsa-let-7e-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (AsPC-1)
hsa-let-7e-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-let-7e-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-let-7e-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-let-7e-5p Sunitinib 5329102 NSC750690 approved sensitive tissue (clear cell renal cell carcinoma)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-let-7e-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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