pre-miRNA Information
pre-miRNA hsa-let-7e   
Genomic Coordinates chr19: 51692786 - 51692864
Synonyms MIRNLET7E, hsa-let-7e, let-7e, MIRLET7E
Description Homo sapiens let-7e stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7e-5p
Sequence 8| UGAGGUAGGAGGUUGUAUAGUU |29
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1189776118 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ANKRD40   
Synonyms -
Description ankyrin repeat domain 40
Transcript NM_052855   
Expression
Putative miRNA Targets on ANKRD40
3'UTR of ANKRD40
(miRNA target sites are highlighted)
>ANKRD40|NM_052855|3'UTR
   1 TGCAGCAGGGACTTTTATCACTGAGTATTATGACAGTGTGCATCACCTCTGGGCCAAGGACAAGCCATTGATCTAAATGC
  81 CTCAGATGCCCGGGAGGGCCTCTGGTGCCACTGCATAGTATATACTAACATCATTCTGCCAAGGTAGGAAGCCCCTGACC
 161 CCCAAGCAGTGGTGCCACTCTTCCAAGCCTCTTGGTGCACAGTAAACCTATTGCTTGAAGCTTTGAACAGCTGAGAAGTG
 241 GTCTGGAGAGGCAGAAGCTGAAGGTTCTATATCCAGTGTGTTTTATGTCCAGAATGTAAGAGAGTTGTCTAAGCAGCAGC
 321 TGAGAGAGAGCGGAGCCTATTTCTAGCCACTCCTGTTGACAGTGCACCTGAAGGGCTGGGATGCGTTTTTCTTGGTGTTG
 401 CATGCTCACAACTCTGCTGACATTGGGAACTTATGAGAGAGGAAGACTCGGGAAAGCACAGATACTGGACAGATGGATTC
 481 TGGTGTGGGGAAAGCACAGATACTGGACAGATGGATTCTAGTGTGACTTGTGACTGTGAGGTTTCCTATAACATATTTAT
 561 AAATGTTACTCAGGTTAAAAGTATTTAAGAATACAGTTAACTAATTGTAAATATGCTGTTAACCAAAAGAGCTTTCCCTC
 641 CCTCACTTTTTCCTTTGTAAACACTCATGACTGCTTCTCTGTCTCGAGTCATCTCTGCATTAACTCCCCTTCGTGGTCAC
 721 TAGAGGGCTCTCTGATGCCTTCTAAAAGAACAACTGCTTTTTTACAATGCCCCCCACCCCCACCCCGCCCATAGAGACAG
 801 GGTCTCACTATGTGGCCCAGGCTGGTCTCAAACTTCTGGCCTTAAGTGATGCTCCTGTCCTTGGCCTCCCAAAGTGCTGG
 881 GATTACAGGTGTGAGCCACTGCACCCAGCCCACTTTTTTTTTACTCTGAAGTGATTCCAGTCATATGTGTGTGTAACTGC
 961 ATCCTATGAGAAGAGCACAAATATTGCTGTTCCATGTTCTCCACTTTCATTTTCCACTACAAATGAAAAGCAATTTTTGA
1041 GACTGAATCTGTTGCTATTTTAAAGGTTATTGTGGGAAACTGAGCTAAAGGAGTTAGCATCTTTATTTTTGTATCAAAAA
1121 TAAAGGTTATTTTGAAATTATTAGGATTTTTACACAATTCTGAAATCTGTTGCTTTTGTAAACAAATTGTTTGATCTTAG
1201 TGATCCCCCTACTACTACCACCAATTCACTTCACAAAGTCAGTTATGAGTCTACCAGACTTTGTTCTGAAAAATAGAAAC
1281 AAAACACCTGATTAAGCTCTTGAGTATGGCATAGGAATTTTTTAGAAGAATGCATTCAAGGATTCTTTTCCTTTCCTTCA
1361 GTGTCATTAATGTTAAAAGAGCAGCCACTGTTTTGTTGAAACAAACAGCTTAACTTCAGAAATAAGAACTAGCACACTTA
1441 GACAAACAGGAGAGCAGGGGTTTGAAGCCAGCTGTCGAAGAGCATCCCTGCTGTCTTAAGAAGCTTTTTCCCCATAGTGC
1521 CTATAGTTTCCAAAGAAACTCAACTTCCTAACTGTGTTAACTTAATTTTATTAGAACACTACAGTTGAGTGAGAACGTGC
1601 AGAAGATGTCAACAGAAGAGAATGTTGTGCTAAGATAATGGCCTCCTGCTGCTGCCTAAATGCTGAAATGAGGTTGAGAT
1681 GTTTTTCAAGGCTAACTTCATGGACTCACTCTGTTTAGTGACTTAATTGTATCCCACCAATTACTGCTGGTGACTTACTC
1761 ACCCTTGTACAGTGTTTGCATAGCAGAGTGAAGGTTACTTATTACCCTCTTTCTCTCAAGTGCTTTAAAGAAGAAACCTC
1841 CCTGGTGTTTCTTTTCTTTTTTTTTTTGAGACGGAGTCTTGCTTTGTTGCCCAGGCTGAAGTGCAGTGGCATAATCTCAG
1921 CTCACTGAAACCTCTGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAAGCATGTGC
2001 CACCATGCCCAGCTAATTTCTGTATTTTAGTAGAGACAAGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGGCC
2081 TCAAGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTCCGATTACAGGTGTGAGCCACCCGGCCCAGCCCCTCCCTTGTGT
2161 TTCAACCAATCGGAAGTGAATTTAACTAGATGTAGTAACCTTTTTTTTCTTTACTTCTAAAACAGTTACAGTTTACTAAT
2241 AAAGTTAAGTCTGGTTCTGTCCTAGAGGAAATAAATTCACTATTAATTCATGTCTTAAGTTACTTGGGTTAAAACACTTT
2321 CAGCCACCCAGATTAATTAAAGTGGAGCAGTGGAGCCCCTGGCTGGGAGATGGCCTCCAGAGGAGCAGCTGCAGGGCATG
2401 TTCTGGGCTTAGCGACAGAGGCAAGCAAGGGACTGGTGTCTCTGGTGAGAGGTGGGTTTGATGTATCTCTGTCCTATGCT
2481 GGTCTCTCTTCTCCTTTATAAAATCCTCTGTGGTCAACTGACTACTGCGTATCGCAGTGGAATAAGACTGCACAGTTGCT
2561 GGTAGGTGAGTTTAAAGTCTTAATCTATGCATTCAGAGAAATATTTTTATATGCTTTGTGTAATTTATAACAAGGATTTT
2641 TTTTTTAGCTTTGTTAACTGTGAATTCACCCCTCCTCCTCCACTGCATATTTAAAGCATGTGTTCACACTGTGTGTAAAC
2721 ATTCACTGAAGATTTTTTCTTTGTGCATTGCTGACTGTTCAAACATAACAAGTATTATTAAAATTAAATATTAACTGACC
2801 GATCCTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uugaUAUGUU-GGAGGAUGGAGu 5'
              | ||:| :|||||:|||| 
Target 5' gttcAAACGATTCTCCTGCCTCa 3'
1945 - 1967 150.00 -22.90
2
miRNA  3' uugauAUGUUGGAGGAUGGAGu 5'
               |: ||||| ||:|||| 
Target 5' ctcacTGAAACCT-CTGCCTCc 3'
1921 - 1941 144.00 -17.70
3
miRNA  3' uuGA-UA-UGUUGGAG-GAUGGAGu 5'
            || || || :|:|| ||::||| 
Target 5' caCTCATGACTGCTTCTCTGTCTCg 3'
662 - 686 128.00 -15.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30481178 8 COSMIC
COSN31511602 19 COSMIC
COSN31488479 44 COSMIC
COSN30147586 51 COSMIC
COSN30160594 51 COSMIC
COSN30101463 64 COSMIC
COSN30112087 72 COSMIC
COSN30186703 83 COSMIC
COSN30186005 92 COSMIC
COSN5840709 96 COSMIC
COSN31511603 109 COSMIC
COSN26879262 132 COSMIC
COSN20124092 150 COSMIC
COSN31514831 175 COSMIC
COSN7437557 712 COSMIC
COSN17729739 769 COSMIC
COSN31957269 782 COSMIC
COSN24403790 787 COSMIC
COSN29682391 913 COSMIC
COSN1721253 983 COSMIC
COSN15588162 1064 COSMIC
COSN7437556 1194 COSMIC
COSN8394097 1334 COSMIC
COSN17678967 1364 COSMIC
COSN16824137 1409 COSMIC
COSN17727844 1419 COSMIC
COSN17722855 1441 COSMIC
COSN16303009 1543 COSMIC
COSN6105626 1545 COSMIC
COSN15320693 1674 COSMIC
COSN6415337 1851 COSMIC
COSN18754362 1856 COSMIC
COSN18882434 1868 COSMIC
COSN21415163 1873 COSMIC
COSN22086514 2021 COSMIC
COSN24993838 2062 COSMIC
COSN1721251 2401 COSMIC
COSN23731827 2533 COSMIC
COSN16901095 2534 COSMIC
COSN5417347 2542 COSMIC
COSN5417346 2554 COSMIC
COSN26259731 2605 COSMIC
COSN29583494 2636 COSMIC
COSN32056332 2667 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs907165450 2 dbSNP
rs761211215 4 dbSNP
rs774025198 7 dbSNP
rs767466822 8 dbSNP
rs200948283 9 dbSNP
rs770602603 11 dbSNP
rs754928063 13 dbSNP
rs376222153 15 dbSNP
rs748782574 15 dbSNP
rs1412079979 22 dbSNP
rs532725061 23 dbSNP
rs772797418 23 dbSNP
rs1397820055 24 dbSNP
rs766175548 25 dbSNP
rs762545038 29 dbSNP
rs1387218171 34 dbSNP
rs1184392937 36 dbSNP
rs750108825 37 dbSNP
rs761367453 42 dbSNP
rs894310910 44 dbSNP
rs1275121352 45 dbSNP
rs111445080 56 dbSNP
rs930758579 57 dbSNP
rs774203718 61 dbSNP
rs1287851294 64 dbSNP
rs897817833 71 dbSNP
rs1021345428 90 dbSNP
rs550457008 91 dbSNP
rs530122430 92 dbSNP
rs944938491 114 dbSNP
rs1210848513 118 dbSNP
rs912184939 118 dbSNP
rs1163588059 120 dbSNP
rs561122212 125 dbSNP
rs1250516730 127 dbSNP
rs1472626074 131 dbSNP
rs1183277581 132 dbSNP
rs1366385662 133 dbSNP
rs1423954838 144 dbSNP
rs1457053844 154 dbSNP
rs1257639482 158 dbSNP
rs1163673318 165 dbSNP
rs1392578411 166 dbSNP
rs1427813093 167 dbSNP
rs1184453791 172 dbSNP
rs1485321088 188 dbSNP
rs112723364 189 dbSNP
rs1350967657 192 dbSNP
rs986409097 195 dbSNP
rs1310620614 198 dbSNP
rs187840984 200 dbSNP
rs1340124879 201 dbSNP
rs1245770994 215 dbSNP
rs1267647628 219 dbSNP
rs1247829378 221 dbSNP
rs1205147898 223 dbSNP
rs1002362476 233 dbSNP
rs143177976 245 dbSNP
rs113285871 247 dbSNP
rs527768331 264 dbSNP
rs1275992801 265 dbSNP
rs1209690197 272 dbSNP
rs559526755 276 dbSNP
rs149096918 279 dbSNP
rs1187806338 289 dbSNP
rs1386919971 290 dbSNP
rs576592235 295 dbSNP
rs556844064 297 dbSNP
rs957140923 302 dbSNP
rs1322456332 310 dbSNP
rs1371125584 312 dbSNP
rs1431500117 317 dbSNP
rs543264992 331 dbSNP
rs768621976 332 dbSNP
rs1396897382 334 dbSNP
rs1315094123 347 dbSNP
rs977089006 348 dbSNP
rs1228133748 351 dbSNP
rs971044747 363 dbSNP
rs1364667793 381 dbSNP
rs997950499 384 dbSNP
rs184206743 385 dbSNP
rs751289699 395 dbSNP
rs1244596424 397 dbSNP
rs1325206873 400 dbSNP
rs1187726144 416 dbSNP
rs748812558 423 dbSNP
rs114631536 434 dbSNP
rs925751420 438 dbSNP
rs1043006046 445 dbSNP
rs774995544 447 dbSNP
rs945920447 449 dbSNP
rs913905666 450 dbSNP
rs534747428 462 dbSNP
rs1338708074 466 dbSNP
rs1390335704 483 dbSNP
rs1190110981 488 dbSNP
rs191964448 490 dbSNP
rs769447301 494 dbSNP
rs1027519610 499 dbSNP
rs994905327 503 dbSNP
rs897951851 505 dbSNP
rs745477804 508 dbSNP
rs1036356509 509 dbSNP
rs960730744 512 dbSNP
rs1489070897 515 dbSNP
rs1267328065 520 dbSNP
rs1008869899 528 dbSNP
rs866809470 530 dbSNP
rs1202453174 539 dbSNP
rs1450641668 548 dbSNP
rs890464799 552 dbSNP
rs558650930 553 dbSNP
rs1051095331 557 dbSNP
rs1266596767 559 dbSNP
rs932279475 563 dbSNP
rs915375237 568 dbSNP
rs1053994120 578 dbSNP
rs1456976079 582 dbSNP
rs935742555 600 dbSNP
rs928082664 605 dbSNP
rs924329861 627 dbSNP
rs980804638 638 dbSNP
rs1293260995 644 dbSNP
rs80033838 646 dbSNP
rs969546510 650 dbSNP
rs1284697417 667 dbSNP
rs1407276553 667 dbSNP
rs1348087234 668 dbSNP
rs1227467944 673 dbSNP
rs570514664 675 dbSNP
rs1300292728 679 dbSNP
rs757663677 685 dbSNP
rs951679062 686 dbSNP
rs539245793 688 dbSNP
rs1295951750 691 dbSNP
rs1428627278 693 dbSNP
rs916933584 697 dbSNP
rs1025893949 706 dbSNP
rs187507260 712 dbSNP
rs958674369 713 dbSNP
rs797012410 716 dbSNP
rs1027898977 719 dbSNP
rs1410476144 727 dbSNP
rs1403764289 730 dbSNP
rs1164579643 738 dbSNP
rs183167111 742 dbSNP
rs530318613 750 dbSNP
rs1335699324 753 dbSNP
rs1039488804 757 dbSNP
rs1306709347 761 dbSNP
rs1270010717 770 dbSNP
rs1350346330 771 dbSNP
rs1408693986 772 dbSNP
rs1175982807 776 dbSNP
rs1482803254 777 dbSNP
rs1375105375 778 dbSNP
rs367573354 781 dbSNP
rs1275417026 782 dbSNP
rs191906181 786 dbSNP
rs1345940358 787 dbSNP
rs1255213454 791 dbSNP
rs1234648801 802 dbSNP
rs1014979451 810 dbSNP
rs1332604633 811 dbSNP
rs1304863027 812 dbSNP
rs1409116323 817 dbSNP
rs1446839953 819 dbSNP
rs375967593 825 dbSNP
rs1042871652 839 dbSNP
rs1430903770 840 dbSNP
rs1328990758 857 dbSNP
rs1355767359 882 dbSNP
rs1432506334 898 dbSNP
rs1301911163 902 dbSNP
rs945898286 915 dbSNP
rs913173793 922 dbSNP
rs1050472279 923 dbSNP
rs1466933479 923 dbSNP
rs1215058448 925 dbSNP
rs1275291712 938 dbSNP
rs1440762421 940 dbSNP
rs1379716023 942 dbSNP
rs527657030 943 dbSNP
rs996827746 944 dbSNP
rs1252667420 947 dbSNP
rs894089913 953 dbSNP
rs1389921822 968 dbSNP
rs1450708786 969 dbSNP
rs1054451812 974 dbSNP
rs1423611214 999 dbSNP
rs939373174 1002 dbSNP
rs1484820569 1003 dbSNP
rs935462736 1004 dbSNP
rs1332882417 1007 dbSNP
rs1406384400 1008 dbSNP
rs1255821223 1019 dbSNP
rs927945517 1028 dbSNP
rs145000312 1033 dbSNP
rs1346922991 1041 dbSNP
rs73346389 1043 dbSNP
rs910058538 1044 dbSNP
rs916883625 1046 dbSNP
rs984737319 1047 dbSNP
rs1263781216 1062 dbSNP
rs951573144 1064 dbSNP
rs1207051623 1067 dbSNP
rs532176769 1072 dbSNP
rs1465641391 1075 dbSNP
rs1195697510 1080 dbSNP
rs1245511407 1081 dbSNP
rs1026338171 1083 dbSNP
rs920489495 1093 dbSNP
rs775404347 1096 dbSNP
rs563137828 1100 dbSNP
rs1429337244 1111 dbSNP
rs1470791809 1113 dbSNP
rs145190467 1119 dbSNP
rs189160933 1125 dbSNP
rs1412310908 1141 dbSNP
rs961852153 1157 dbSNP
rs1014780706 1167 dbSNP
rs987533732 1186 dbSNP
rs1329295796 1188 dbSNP
rs1435647804 1205 dbSNP
rs1334464348 1210 dbSNP
rs1284049217 1214 dbSNP
rs954855421 1215 dbSNP
rs1029398613 1216 dbSNP
rs1267746998 1220 dbSNP
rs1017917671 1224 dbSNP
rs1390254236 1226 dbSNP
rs563285779 1240 dbSNP
rs1397391593 1241 dbSNP
rs1207279546 1243 dbSNP
rs996156563 1253 dbSNP
rs1451574872 1256 dbSNP
rs1200773948 1294 dbSNP
rs1269052658 1295 dbSNP
rs1006646927 1297 dbSNP
rs904311503 1306 dbSNP
rs1021366004 1313 dbSNP
rs115698743 1318 dbSNP
rs543822093 1324 dbSNP
rs891609373 1330 dbSNP
rs1159782755 1333 dbSNP
rs1388274220 1340 dbSNP
rs902675804 1342 dbSNP
rs1161998392 1374 dbSNP
rs1471885520 1375 dbSNP
rs1367298595 1379 dbSNP
rs540687274 1382 dbSNP
rs1287746148 1395 dbSNP
rs938583940 1405 dbSNP
rs1188557617 1407 dbSNP
rs906554520 1412 dbSNP
rs1444307234 1417 dbSNP
rs1045007466 1425 dbSNP
rs1259431411 1427 dbSNP
rs949839005 1430 dbSNP
rs1207819966 1440 dbSNP
rs895601157 1454 dbSNP
rs1223615016 1457 dbSNP
rs1294597207 1467 dbSNP
rs1482340045 1469 dbSNP
rs571966510 1474 dbSNP
rs141241554 1477 dbSNP
rs920275813 1482 dbSNP
rs973289192 1487 dbSNP
rs984202344 1491 dbSNP
rs940618708 1498 dbSNP
rs538735934 1504 dbSNP
rs1163938201 1509 dbSNP
rs1231362744 1510 dbSNP
rs930152866 1512 dbSNP
rs755281820 1514 dbSNP
rs1427714117 1519 dbSNP
rs1307538099 1525 dbSNP
rs754150940 1535 dbSNP
rs79776367 1543 dbSNP
rs761754810 1549 dbSNP
rs1246574142 1553 dbSNP
rs1324269750 1556 dbSNP
rs1247218640 1563 dbSNP
rs776222535 1564 dbSNP
rs1318977361 1566 dbSNP
rs1029037065 1575 dbSNP
rs1434738712 1576 dbSNP
rs1389827651 1578 dbSNP
rs1228276042 1579 dbSNP
rs1250340524 1583 dbSNP
rs1480667266 1584 dbSNP
rs975250664 1596 dbSNP
rs556779213 1597 dbSNP
rs1404065320 1599 dbSNP
rs977415017 1605 dbSNP
rs1244712902 1607 dbSNP
rs1390148614 1607 dbSNP
rs182450947 1622 dbSNP
rs1447652360 1624 dbSNP
rs1169637982 1625 dbSNP
rs1032332779 1627 dbSNP
rs1463595883 1630 dbSNP
rs770446180 1640 dbSNP
rs965580171 1644 dbSNP
rs548154621 1646 dbSNP
rs1473907438 1649 dbSNP
rs985156876 1653 dbSNP
rs1339155850 1655 dbSNP
rs1363464914 1661 dbSNP
rs1025092517 1670 dbSNP
rs1296923694 1672 dbSNP
rs968359540 1674 dbSNP
rs1309735882 1699 dbSNP
rs1449908280 1708 dbSNP
rs548031810 1709 dbSNP
rs1228998584 1711 dbSNP
rs533947471 1729 dbSNP
rs1253713901 1730 dbSNP
rs1322444888 1732 dbSNP
rs1219328724 1733 dbSNP
rs1009965856 1737 dbSNP
rs1450918444 1739 dbSNP
rs1013721291 1745 dbSNP
rs1430186916 1746 dbSNP
rs1196910674 1747 dbSNP
rs1428652780 1749 dbSNP
rs895306892 1750 dbSNP
rs1470466335 1754 dbSNP
rs1178837798 1756 dbSNP
rs891636141 1758 dbSNP
rs1453532562 1762 dbSNP
rs1289765249 1763 dbSNP
rs1364754107 1767 dbSNP
rs1385564113 1770 dbSNP
rs191099238 1771 dbSNP
rs1211048705 1775 dbSNP
rs1001706887 1778 dbSNP
rs1264625225 1783 dbSNP
rs147789707 1788 dbSNP
rs111865307 1798 dbSNP
rs1261071413 1802 dbSNP
rs1044284929 1813 dbSNP
rs1207987587 1817 dbSNP
rs1366427120 1837 dbSNP
rs948086581 1838 dbSNP
rs779359582 1839 dbSNP
rs1480813665 1842 dbSNP
rs1434980949 1844 dbSNP
rs1349755344 1845 dbSNP
rs1324290733 1847 dbSNP
rs1418695384 1848 dbSNP
rs199897066 1851 dbSNP
rs1347313041 1852 dbSNP
rs12602805 1855 dbSNP
rs11079923 1856 dbSNP
rs57769677 1857 dbSNP
rs1052116288 1860 dbSNP
rs1457748418 1860 dbSNP
rs1460022756 1861 dbSNP
rs866268486 1861 dbSNP
rs1168247697 1862 dbSNP
rs1490478341 1862 dbSNP
rs1224877539 1863 dbSNP
rs1270160964 1864 dbSNP
rs1177982986 1865 dbSNP
rs1422436460 1866 dbSNP
rs1163294648 1868 dbSNP
rs1386435926 1868 dbSNP
rs528892232 1868 dbSNP
rs867375050 1868 dbSNP
rs1419359539 1872 dbSNP
rs1430605053 1877 dbSNP
rs1391811486 1881 dbSNP
rs933145224 1886 dbSNP
rs1335912246 1890 dbSNP
rs888428979 1894 dbSNP
rs921775418 1895 dbSNP
rs1268347842 1903 dbSNP
rs1338621626 1906 dbSNP
rs1215265269 1909 dbSNP
rs769127888 1923 dbSNP
rs1321723826 1941 dbSNP
rs930040350 1942 dbSNP
rs762888113 1943 dbSNP
rs563172701 1948 dbSNP
rs976986324 1950 dbSNP
rs549733889 1952 dbSNP
rs1481816276 1953 dbSNP
rs911505020 1961 dbSNP
rs1186635949 1974 dbSNP
rs1421016470 1980 dbSNP
rs1467958629 1988 dbSNP
rs1273245033 1993 dbSNP
rs774887737 1994 dbSNP
rs1175280232 1997 dbSNP
rs1205467709 2001 dbSNP
rs985691165 2011 dbSNP
rs968392303 2012 dbSNP
rs1021263018 2015 dbSNP
rs1315899761 2036 dbSNP
rs978098382 2038 dbSNP
rs1272069643 2039 dbSNP
rs529866555 2056 dbSNP
rs1025143411 2057 dbSNP
rs1367346398 2058 dbSNP
rs561036445 2068 dbSNP
rs541273334 2079 dbSNP
rs1283963331 2090 dbSNP
rs1448141791 2093 dbSNP
rs185316759 2097 dbSNP
rs1034294245 2098 dbSNP
rs150424904 2101 dbSNP
rs181222078 2118 dbSNP
rs898947695 2119 dbSNP
rs1481201719 2134 dbSNP
rs1037461819 2137 dbSNP
rs969853288 2139 dbSNP
rs540740181 2140 dbSNP
rs1413763605 2150 dbSNP
rs576183204 2157 dbSNP
rs1425589896 2172 dbSNP
rs1004510217 2185 dbSNP
rs1363571157 2189 dbSNP
rs1006063750 2191 dbSNP
rs1051657846 2192 dbSNP
rs1347659988 2199 dbSNP
rs1250454160 2202 dbSNP
rs1225763079 2209 dbSNP
rs1351861301 2209 dbSNP
rs933262688 2209 dbSNP
rs921767822 2210 dbSNP
rs1039317085 2212 dbSNP
rs936751513 2213 dbSNP
rs190304057 2214 dbSNP
rs1235449061 2217 dbSNP
rs1048349532 2222 dbSNP
rs9455 2223 dbSNP
rs1362801750 2224 dbSNP
rs1312025713 2227 dbSNP
rs1160049817 2229 dbSNP
rs1279743516 2231 dbSNP
rs1423906812 2251 dbSNP
rs574134856 2253 dbSNP
rs77624595 2259 dbSNP
rs1327637169 2269 dbSNP
rs770557919 2273 dbSNP
rs897272707 2282 dbSNP
rs559787368 2287 dbSNP
rs773889349 2289 dbSNP
rs1389682174 2294 dbSNP
rs966658911 2317 dbSNP
rs1287822349 2322 dbSNP
rs1041137239 2342 dbSNP
rs534501374 2343 dbSNP
rs992412697 2347 dbSNP
rs944209760 2357 dbSNP
rs1352404807 2363 dbSNP
rs1359409373 2369 dbSNP
rs1247345917 2381 dbSNP
rs1301373466 2382 dbSNP
rs373213773 2385 dbSNP
rs747400155 2390 dbSNP
rs781338406 2391 dbSNP
rs8196 2399 dbSNP
rs996043516 2400 dbSNP
rs962871807 2409 dbSNP
rs751770335 2413 dbSNP
rs914225629 2414 dbSNP
rs1443993528 2416 dbSNP
rs1164143797 2426 dbSNP
rs988536920 2427 dbSNP
rs1460555363 2431 dbSNP
rs1167357155 2436 dbSNP
rs575891744 2443 dbSNP
rs1411834129 2448 dbSNP
rs879222407 2449 dbSNP
rs1335225551 2450 dbSNP
rs1004647544 2455 dbSNP
rs928434577 2467 dbSNP
rs981140973 2480 dbSNP
rs1317784324 2482 dbSNP
rs1325161307 2488 dbSNP
rs1224642740 2494 dbSNP
rs537823739 2494 dbSNP
rs1250250245 2496 dbSNP
rs1030433188 2512 dbSNP
rs1410968230 2517 dbSNP
rs969876098 2523 dbSNP
rs1260795025 2524 dbSNP
rs777511621 2524 dbSNP
rs1460707176 2526 dbSNP
rs1022717795 2528 dbSNP
rs1258207415 2529 dbSNP
rs900453214 2529 dbSNP
rs1038960180 2533 dbSNP
rs936468685 2534 dbSNP
rs1483348527 2548 dbSNP
rs1174564647 2555 dbSNP
rs1405538733 2564 dbSNP
rs1470526966 2581 dbSNP
rs1339053604 2585 dbSNP
rs1383502114 2614 dbSNP
rs1382128613 2616 dbSNP
rs1238430278 2621 dbSNP
rs1205904295 2626 dbSNP
rs1326516644 2631 dbSNP
rs1006094725 2633 dbSNP
rs1405711490 2647 dbSNP
rs903715742 2647 dbSNP
rs1463937125 2648 dbSNP
rs569028895 2649 dbSNP
rs1229533440 2653 dbSNP
rs1042426065 2663 dbSNP
rs1318861695 2668 dbSNP
rs557310701 2672 dbSNP
rs1204114024 2674 dbSNP
rs1257509529 2677 dbSNP
rs1484890643 2683 dbSNP
rs1204467699 2686 dbSNP
rs952033872 2689 dbSNP
rs1026641869 2690 dbSNP
rs1227983851 2691 dbSNP
rs748646439 2705 dbSNP
rs1480874998 2707 dbSNP
rs1362421899 2711 dbSNP
rs917908501 2720 dbSNP
rs1362959901 2721 dbSNP
rs1401328566 2723 dbSNP
rs1300719671 2726 dbSNP
rs14882 2739 dbSNP
rs994209765 2744 dbSNP
rs1285742023 2769 dbSNP
rs1303212131 2774 dbSNP
rs1432721986 2782 dbSNP
rs1314924246 2793 dbSNP
rs897128126 2797 dbSNP
rs535510320 2798 dbSNP
rs755157471 2800 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site 3'UTR
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uugaUAUGUU-GGAGGAUGGAGu 5'
              | ||:| :|||||:|||| 
Target 5' gttcAAACGATTCTCCTGCCTCa 3'
27 - 49
2
miRNA  3' uugauAUGUUGGAGGAUGGAGu 5'
               |: ||||| ||:|||| 
Target 5' ctcacTGAAACCT-CTGCCTCc 3'
3 - 23
Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
STAD 0.593 0 0.531 0 32 Click to see details
BLCA -0.51 0.02 -0.470 0.02 18 Click to see details
LUSC -0.318 0.03 -0.274 0.05 38 Click to see details
ESCA 0.525 0.05 0.482 0.07 11 Click to see details
HNSC 0.219 0.08 0.242 0.06 42 Click to see details
KIRC 0.152 0.11 0.158 0.1 68 Click to see details
THCA 0.163 0.11 0.170 0.1 59 Click to see details
LUAD -0.33 0.15 -0.224 0.24 12 Click to see details
PCPG 0.848 0.18 1.000 0.5 3 Click to see details
PRAD 0.132 0.18 0.272 0.03 50 Click to see details
BRCA -0.096 0.19 -0.103 0.18 84 Click to see details
UCEC -0.188 0.22 -0.207 0.2 19 Click to see details
CHOL -0.286 0.23 -0.500 0.09 9 Click to see details
COAD 0.243 0.28 0.119 0.39 8 Click to see details
CESC -0.351 0.39 -0.500 0.33 3 Click to see details
KIRP -0.053 0.39 -0.053 0.39 32 Click to see details
KICH 0.018 0.47 0.015 0.47 25 Click to see details
LIHC -0.003 0.49 -0.046 0.38 49 Click to see details
PAAD -0.014 0.49 -0.400 0.3 4 Click to see details
PAAD -0.014 0.49 -0.400 0.3 4 Click to see details
PAAD -0.014 0.49 -0.400 0.3 4 Click to see details
581 hsa-let-7e-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT002081 HMGA2 high mobility group AT-hook 2 5 5
MIRT003932 EIF3J eukaryotic translation initiation factor 3 subunit J 2 1
MIRT004469 SMC1A structural maintenance of chromosomes 1A 4 7
MIRT005718 WNT1 Wnt family member 1 4 1
MIRT006122 CCND1 cyclin D1 5 4
MIRT006404 MPL MPL proto-oncogene, thrombopoietin receptor 1 1
MIRT032098 RABGAP1L RAB GTPase activating protein 1 like 1 1
MIRT032099 DAD1 defender against cell death 1 1 1
MIRT032100 MYCN MYCN proto-oncogene, bHLH transcription factor 4 2
MIRT051413 WDR67 TBC1 domain family member 31 1 1
MIRT051414 FAM219B family with sequence similarity 219 member B 1 1
MIRT051415 C11orf91 chromosome 11 open reading frame 91 1 1
MIRT051416 CENPP centromere protein P 1 1
MIRT051417 TMEM107 transmembrane protein 107 1 1
MIRT051418 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT051419 DAAM1 dishevelled associated activator of morphogenesis 1 1 1
MIRT051420 DGCR8 DGCR8, microprocessor complex subunit 1 1
MIRT051421 RAP1A RAP1A, member of RAS oncogene family 1 1
MIRT051422 RPA1 replication protein A1 1 1
MIRT051423 SKIV2L Ski2 like RNA helicase 1 1
MIRT051424 AGO1 argonaute 1, RISC catalytic component 4 2
MIRT051425 RPS27 ribosomal protein S27 1 1
MIRT051426 ARNT2 aryl hydrocarbon receptor nuclear translocator 2 1 1
MIRT051427 GPM6B glycoprotein M6B 1 1
MIRT051428 TTLL12 tubulin tyrosine ligase like 12 1 1
MIRT051429 HIST2H2BF histone cluster 2 H2B family member f 1 1
MIRT051430 CELF2 CUGBP Elav-like family member 2 1 1
MIRT051431 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT051432 VPS13D vacuolar protein sorting 13 homolog D 1 1
MIRT051433 RPL10 ribosomal protein L10 1 1
MIRT051434 SPCS2 signal peptidase complex subunit 2 1 1
MIRT051435 DCAF8 DDB1 and CUL4 associated factor 8 1 1
MIRT051436 CTC1 CST telomere replication complex component 1 1 1
MIRT051437 NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit 1 1
MIRT051438 PHF3 PHD finger protein 3 1 1
MIRT051439 TUBA1B tubulin alpha 1b 1 1
MIRT051440 SHANK1 SH3 and multiple ankyrin repeat domains 1 1 1
MIRT051441 SKA2 spindle and kinetochore associated complex subunit 2 1 1
MIRT051442 SPTBN1 spectrin beta, non-erythrocytic 1 1 1
MIRT051443 ND2 MTND2 1 1
MIRT051444 MED13L mediator complex subunit 13 like 1 1
MIRT051445 RCOR3 REST corepressor 3 1 1
MIRT051446 MACF1 microtubule-actin crosslinking factor 1 1 1
MIRT051447 RDX radixin 2 5
MIRT051448 PCBP2 poly(rC) binding protein 2 1 1
MIRT051449 UBAP2L ubiquitin associated protein 2 like 1 1
MIRT051450 CDCA3 cell division cycle associated 3 1 1
MIRT051451 CABLES1 Cdk5 and Abl enzyme substrate 1 1 1
MIRT051452 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 1
MIRT051453 C12orf49 chromosome 12 open reading frame 49 1 1
MIRT051454 TIMP3 TIMP metallopeptidase inhibitor 3 1 1
MIRT051455 WBSCR16 RCC1 like 1 1
MIRT051456 SLC2A11 solute carrier family 2 member 11 1 1
MIRT051457 NF1 neurofibromin 1 1 1
MIRT051458 LRRC8A leucine rich repeat containing 8 VRAC subunit A 1 1
MIRT051459 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT051460 DTNB dystrobrevin beta 1 1
MIRT051461 SCMH1 Scm polycomb group protein homolog 1 1 1
MIRT051462 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT051463 RHBDD2 rhomboid domain containing 2 1 1
MIRT051464 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT051465 NDST1 N-deacetylase and N-sulfotransferase 1 1 1
MIRT051466 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 5
MIRT051467 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT051468 BAHCC1 BAH domain and coiled-coil containing 1 1 1
MIRT051469 CARM1 coactivator associated arginine methyltransferase 1 1 1
MIRT051470 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT051471 ND3 NADH dehydrogenase, subunit 3 (complex I) 1 1
MIRT051472 PIGS phosphatidylinositol glycan anchor biosynthesis class S 1 1
MIRT051473 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT051474 RPN2 ribophorin II 1 1
MIRT051475 RPL12 ribosomal protein L12 1 1
MIRT051476 NME4 NME/NM23 nucleoside diphosphate kinase 4 1 1
MIRT051477 IVD isovaleryl-CoA dehydrogenase 1 1
MIRT051478 JAZF1 JAZF zinc finger 1 1 1
MIRT051479 ND4 NADH dehydrogenase, subunit 4 (complex I) 1 1
MIRT051480 VARS valyl-tRNA synthetase 1 1
MIRT051481 RNF26 ring finger protein 26 1 1
MIRT051482 LHFPL2 LHFPL tetraspan subfamily member 2 1 1
MIRT051483 ARCN1 archain 1 1 1
MIRT051484 COX1 cytochrome c oxidase subunit I 1 1
MIRT051485 SLC12A4 solute carrier family 12 member 4 1 1
MIRT051486 AEBP2 AE binding protein 2 1 1
MIRT051487 PET112 glutamyl-tRNA amidotransferase subunit B 1 1
MIRT051488 UROC1 urocanate hydratase 1 1 1
MIRT051489 IGF1R insulin like growth factor 1 receptor 5 10
MIRT051490 BSDC1 BSD domain containing 1 1 1
MIRT051491 PTK2 protein tyrosine kinase 2 1 1
MIRT051492 CDC5L cell division cycle 5 like 1 1
MIRT051493 EN2 engrailed homeobox 2 1 1
MIRT051494 SSB Sjogren syndrome antigen B 1 1
MIRT051495 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT051496 RRAGC Ras related GTP binding C 1 1
MIRT051497 ZNF236 zinc finger protein 236 1 1
MIRT051498 SEMA4B semaphorin 4B 1 1
MIRT051499 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT051500 XIAP X-linked inhibitor of apoptosis 1 1
MIRT051501 GTF2I general transcription factor IIi 1 1
MIRT051502 JMJD1C jumonji domain containing 1C 1 1
MIRT051503 OTUD5 OTU deubiquitinase 5 1 1
MIRT051504 NOLC1 nucleolar and coiled-body phosphoprotein 1 1 1
MIRT051505 PPIG peptidylprolyl isomerase G 1 1
MIRT051506 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT051507 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 1 1
MIRT051508 VAMP2 vesicle associated membrane protein 2 1 1
MIRT051509 LSR lipolysis stimulated lipoprotein receptor 1 1
MIRT051510 KIAA0355 KIAA0355 1 1
MIRT051511 RPSA ribosomal protein SA 1 1
MIRT051512 DCAF6 DDB1 and CUL4 associated factor 6 1 1
MIRT051513 UHRF1BP1 UHRF1 binding protein 1 1 1
MIRT051514 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 1 1
MIRT051515 PIGP phosphatidylinositol glycan anchor biosynthesis class P 1 1
MIRT051516 LMLN leishmanolysin like peptidase 1 1
MIRT051517 PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 1 1
MIRT051518 HIPK1 homeodomain interacting protein kinase 1 1 1
MIRT051519 SERF2 small EDRK-rich factor 2 1 1
MIRT051520 RBM4 RNA binding motif protein 4 1 1
MIRT051521 RBM14 RNA binding motif protein 14 1 1
MIRT051522 HMGB1 high mobility group box 1 1 1
MIRT051523 GMPS guanine monophosphate synthase 1 1
MIRT051524 DIAPH1 diaphanous related formin 1 1 1
MIRT051525 STAM signal transducing adaptor molecule 1 1
MIRT051526 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT051527 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 1 1
MIRT051528 MARCH5 membrane associated ring-CH-type finger 5 1 1
MIRT051529 SQLE squalene epoxidase 1 1
MIRT051530 TIMM50 translocase of inner mitochondrial membrane 50 1 1
MIRT051531 NDUFA3 NADH:ubiquinone oxidoreductase subunit A3 1 1
MIRT051532 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 1 1
MIRT051533 NRSN2 neurensin 2 1 1
MIRT051534 SALL1 spalt like transcription factor 1 1 1
MIRT051535 COX3 cytochrome c oxidase III 1 1
MIRT051536 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT051537 SUPT4H1 SPT4 homolog, DSIF elongation factor subunit 1 1
MIRT051538 PACS2 phosphofurin acidic cluster sorting protein 2 1 1
MIRT051539 MTMR14 myotubularin related protein 14 1 1
MIRT051540 LUZP1 leucine zipper protein 1 1 1
MIRT051541 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT051542 SUZ12 SUZ12 polycomb repressive complex 2 subunit 1 1
MIRT051543 PAPD4 poly(A) RNA polymerase D4, non-canonical 1 1
MIRT051544 QSOX1 quiescin sulfhydryl oxidase 1 1 1
MIRT051545 SPATA13 spermatogenesis associated 13 1 1
MIRT051546 DHX57 DExH-box helicase 57 1 1
MIRT051547 KATNB1 katanin regulatory subunit B1 1 1
MIRT051548 COL6A1 collagen type VI alpha 1 chain 1 1
MIRT051549 DHX15 DEAH-box helicase 15 1 1
MIRT051550 MTCH2 mitochondrial carrier 2 1 1
MIRT051551 KIAA0100 KIAA0100 1 1
MIRT051552 SUGP2 SURP and G-patch domain containing 2 1 1
MIRT051553 NCLN nicalin 1 1
MIRT051554 ATXN2L ataxin 2 like 1 1
MIRT051555 CHD9 chromodomain helicase DNA binding protein 9 1 1
MIRT051556 PES1 pescadillo ribosomal biogenesis factor 1 1 1
MIRT051557 NUP155 nucleoporin 155 2 7
MIRT051558 GNG5 G protein subunit gamma 5 2 3
MIRT051559 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT051560 MTFR1 mitochondrial fission regulator 1 1 1
MIRT051561 IRS2 insulin receptor substrate 2 2 1
MIRT051562 IRS4 insulin receptor substrate 4 1 1
MIRT051563 PPP1R10 protein phosphatase 1 regulatory subunit 10 1 1
MIRT051564 ZNF284 zinc finger protein 284 1 1
MIRT051565 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 1 1
MIRT051566 SCD stearoyl-CoA desaturase 1 1
MIRT051567 FDPS farnesyl diphosphate synthase 1 1
MIRT051568 KRBOX4 KRAB box domain containing 4 1 1
MIRT051569 BRI3 brain protein I3 1 1
MIRT051570 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT051571 PYCR1 pyrroline-5-carboxylate reductase 1 1 1
MIRT051572 SMAP2 small ArfGAP2 1 1
MIRT051573 WDFY3 WD repeat and FYVE domain containing 3 1 1
MIRT051574 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT051575 SRSF2 serine and arginine rich splicing factor 2 1 1
MIRT051576 PGD phosphogluconate dehydrogenase 1 1
MIRT051577 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT051578 ZNF652 zinc finger protein 652 1 1
MIRT051579 PSMA6 proteasome subunit alpha 6 1 1
MIRT051580 SLC38A2 solute carrier family 38 member 2 1 1
MIRT051581 LRRC41 leucine rich repeat containing 41 1 1
MIRT051582 RANBP2 RAN binding protein 2 1 1
MIRT051583 SVIL supervillin 1 1
MIRT051584 CCNG1 cyclin G1 1 1
MIRT051585 ZNF256 zinc finger protein 256 1 1
MIRT051586 COPG1 coatomer protein complex subunit gamma 1 1 1
MIRT051587 PDCD11 programmed cell death 11 1 1
MIRT051588 CNBP CCHC-type zinc finger nucleic acid binding protein 1 1
MIRT051589 USP37 ubiquitin specific peptidase 37 1 1
MIRT051590 UBE2V2 ubiquitin conjugating enzyme E2 V2 1 1
MIRT051591 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT051592 LMNA lamin A/C 1 1
MIRT051593 STAT3 signal transducer and activator of transcription 3 1 1
MIRT051594 TRPV1 transient receptor potential cation channel subfamily V member 1 1 1
MIRT051595 MATR3 matrin 3 1 1
MIRT051596 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 1
MIRT051597 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 1 1
MIRT051598 WDR48 WD repeat domain 48 1 1
MIRT051599 RBM8A RNA binding motif protein 8A 1 1
MIRT051600 SCYL1 SCY1 like pseudokinase 1 1 1
MIRT051601 C19orf48 chromosome 19 open reading frame 48 1 1
MIRT051602 FOXD4L6 forkhead box D4 like 6 1 1
MIRT051603 PIGN phosphatidylinositol glycan anchor biosynthesis class N 1 1
MIRT051604 SPCS3 signal peptidase complex subunit 3 1 1
MIRT051605 TNFAIP1 TNF alpha induced protein 1 1 1
MIRT051606 MS4A10 membrane spanning 4-domains A10 1 1
MIRT051607 MSMO1 methylsterol monooxygenase 1 1 1
MIRT051608 ARID1A AT-rich interaction domain 1A 1 1
MIRT051609 NCKIPSD NCK interacting protein with SH3 domain 2 5
MIRT051610 NCBP1 nuclear cap binding protein subunit 1 1 1
MIRT051611 COX16 COX16, cytochrome c oxidase assembly homolog 1 1
MIRT051612 NUDT8 nudix hydrolase 8 1 1
MIRT051613 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT051614 TXNRD1 thioredoxin reductase 1 1 1
MIRT051615 ELMSAN1 ELM2 and Myb/SANT domain containing 1 1 1
MIRT051616 CTSA cathepsin A 1 1
MIRT051617 PRRC2A proline rich coiled-coil 2A 1 1
MIRT051618 SPAG9 sperm associated antigen 9 1 1
MIRT051619 AGMAT agmatinase 1 1
MIRT051620 NCKAP5L NCK associated protein 5 like 1 1
MIRT051621 ZFP62 ZFP62 zinc finger protein 1 1
MIRT051622 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1 1
MIRT051623 POLR3D RNA polymerase III subunit D 2 3
MIRT051624 PRPF8 pre-mRNA processing factor 8 1 1
MIRT051625 ATP6 ATP synthase F0 subunit 6 1 1
MIRT051626 ZFAND5 zinc finger AN1-type containing 5 1 1
MIRT051627 BAZ1B bromodomain adjacent to zinc finger domain 1B 1 1
MIRT051628 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT051629 BMP2K BMP2 inducible kinase 1 1
MIRT051630 SPN sialophorin 1 1
MIRT051631 PA2G4 proliferation-associated 2G4 1 1
MIRT051632 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 1
MIRT051633 TUBB4B tubulin beta 4B class IVb 1 1
MIRT051634 TRRAP transformation/transcription domain associated protein 1 1
MIRT051635 SLCO4A1 solute carrier organic anion transporter family member 4A1 1 1
MIRT051636 CCRN4L nocturnin 1 1
MIRT051637 USE1 unconventional SNARE in the ER 1 1 1
MIRT051638 STARD7 StAR related lipid transfer domain containing 7 1 1
MIRT051639 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 3
MIRT051640 CLTC clathrin heavy chain 1 1
MIRT051641 TERF1 telomeric repeat binding factor 1 1 1
MIRT051642 PAX3 paired box 3 1 1
MIRT051643 CCDC97 coiled-coil domain containing 97 1 1
MIRT051644 HLA-C major histocompatibility complex, class I, C 1 1
MIRT051645 GTPBP8 GTP binding protein 8 (putative) 1 1
MIRT051646 VGLL4 vestigial like family member 4 1 1
MIRT051647 ANKRD40 ankyrin repeat domain 40 1 1
MIRT051648 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 1 1
MIRT051649 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT051650 DSP desmoplakin 1 1
MIRT051651 UBN2 ubinuclein 2 1 1
MIRT051652 ZNF805 zinc finger protein 805 1 1
MIRT051653 RBBP4 RB binding protein 4, chromatin remodeling factor 1 1
MIRT051654 OCLN occludin 1 1
MIRT051655 CBX5 chromobox 5 2 3
MIRT051656 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT051657 MKI67 marker of proliferation Ki-67 1 1
MIRT051658 SUB1 SUB1 homolog, transcriptional regulator 1 1
MIRT051659 RSL1D1 ribosomal L1 domain containing 1 1 1
MIRT051660 SEC23IP SEC23 interacting protein 1 1
MIRT051661 RNMT RNA guanine-7 methyltransferase 1 1
MIRT051662 SGSM3 small G protein signaling modulator 3 1 1
MIRT051663 ZFP3 ZFP3 zinc finger protein 1 1
MIRT051664 GLUL glutamate-ammonia ligase 1 1
MIRT051665 POLD1 DNA polymerase delta 1, catalytic subunit 1 1
MIRT051666 WDR4 WD repeat domain 4 1 1
MIRT051667 PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 1 1
MIRT051668 RAI2 retinoic acid induced 2 1 1
MIRT051669 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 1 1
MIRT051670 UTP15 UTP15, small subunit processome component 1 1
MIRT051671 THADA THADA, armadillo repeat containing 1 1
MIRT051672 ZNF451 zinc finger protein 451 1 1
MIRT051673 CREBBP CREB binding protein 1 1
MIRT051674 ZNF770 zinc finger protein 770 1 1
MIRT051675 CLDN4 claudin 4 1 1
MIRT051676 ZKSCAN7 zinc finger with KRAB and SCAN domains 7 1 1
MIRT051677 NICN1 nicolin 1 1 1
MIRT051678 RPLP2 ribosomal protein lateral stalk subunit P2 1 1
MIRT051679 DCBLD2 discoidin, CUB and LCCL domain containing 2 1 1
MIRT051680 IRGQ immunity related GTPase Q 1 1
MIRT051681 CA5B carbonic anhydrase 5B 1 1
MIRT051682 COX14 COX14, cytochrome c oxidase assembly factor 1 1
MIRT051683 PSD3 pleckstrin and Sec7 domain containing 3 1 1
MIRT051684 RPL27A ribosomal protein L27a 1 1
MIRT051685 CWC15 CWC15 spliceosome associated protein homolog 1 1
MIRT051686 NT5DC2 5'-nucleotidase domain containing 2 1 1
MIRT051687 OR7D2 olfactory receptor family 7 subfamily D member 2 1 1
MIRT051688 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 1 1
MIRT051689 NUDT15 nudix hydrolase 15 1 1
MIRT051690 CDH18 cadherin 18 1 1
MIRT051691 FAM160B1 family with sequence similarity 160 member B1 1 1
MIRT051692 DZIP1 DAZ interacting zinc finger protein 1 1 1
MIRT051693 TDRD7 tudor domain containing 7 1 1
MIRT051694 TCF4 transcription factor 4 1 1
MIRT051695 ENSA endosulfine alpha 1 1
MIRT051696 GTF3C1 general transcription factor IIIC subunit 1 1 1
MIRT051697 TNFRSF1A TNF receptor superfamily member 1A 1 1
MIRT051698 CCDC113 coiled-coil domain containing 113 1 1
MIRT051699 MYO9B myosin IXB 1 1
MIRT051700 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 1 1
MIRT051701 PRAMEF13 PRAME family member 13 1 1
MIRT051702 PMPCA peptidase, mitochondrial processing alpha subunit 2 5
MIRT051703 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT051704 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT051705 CCDC106 coiled-coil domain containing 106 1 1
MIRT051706 CYP2B6 cytochrome P450 family 2 subfamily B member 6 1 1
MIRT051707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 3
MIRT051708 PSME4 proteasome activator subunit 4 1 1
MIRT051709 SETD1A SET domain containing 1A 1 1
MIRT054561 MMP9 matrix metallopeptidase 9 3 1
MIRT054579 IGF1 insulin like growth factor 1 3 1
MIRT063195 ADIPOR2 adiponectin receptor 2 2 2
MIRT065687 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT067399 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT068154 TXLNA taxilin alpha 2 2
MIRT068528 NHLRC3 NHL repeat containing 3 2 6
MIRT068789 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT073006 ARID3B AT-rich interaction domain 3B 2 6
MIRT076223 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT077616 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT080398 ONECUT2 one cut homeobox 2 2 2
MIRT083300 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT084976 BACH1 BTB domain and CNC homolog 1 2 2
MIRT094160 PCGF3 polycomb group ring finger 3 2 6
MIRT094460 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT095766 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT100094 ABT1 activator of basal transcription 1 2 8
MIRT112242 MDM4 MDM4, p53 regulator 2 4
MIRT118586 STK4 serine/threonine kinase 4 2 2
MIRT120921 PDE12 phosphodiesterase 12 2 8
MIRT123317 CALU calumenin 2 2
MIRT152272 TNFSF9 TNF superfamily member 9 2 2
MIRT153847 NCOA3 nuclear receptor coactivator 3 2 2
MIRT168583 HMGA1 high mobility group AT-hook 1 2 4
MIRT180603 CRY2 cryptochrome circadian clock 2 2 2
MIRT187717 SUOX sulfite oxidase 2 2
MIRT191404 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT193101 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT215720 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT218815 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT240330 UBXN2B UBX domain protein 2B 2 2
MIRT243473 TRIM71 tripartite motif containing 71 2 2
MIRT244069 EDN1 endothelin 1 2 2
MIRT252330 SALL3 spalt like transcription factor 3 2 2
MIRT255314 CDV3 CDV3 homolog 2 2
MIRT259277 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT259479 TXLNG taxilin gamma 2 2
MIRT260707 CLDN12 claudin 12 2 6
MIRT264693 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT266212 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT266626 CHTOP chromatin target of PRMT1 2 2
MIRT268839 C1ORF21 chromosome 1 open reading frame 21 2 2
MIRT294446 ZNF264 zinc finger protein 264 2 2
MIRT297013 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT297443 SLC20A1 solute carrier family 20 member 1 2 4
MIRT300037 BZW1 basic leucine zipper and W2 domains 1 2 4
MIRT300893 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT303320 MXD1 MAX dimerization protein 1 2 2
MIRT309846 NAT8L N-acetyltransferase 8 like 2 2
MIRT322428 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT324731 ACER2 alkaline ceramidase 2 2 2
MIRT402057 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437395 LIN28A lin-28 homolog A 4 1
MIRT437396 AURKB aurora kinase B 4 1
MIRT437435 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 1
MIRT438632 TNFRSF10B TNF receptor superfamily member 10b 2 1
MIRT439135 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT442020 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT445658 ATP6V1G1 ATPase H+ transporting V1 subunit G1 2 6
MIRT447136 KIF27 kinesin family member 27 2 2
MIRT448259 ZNF774 zinc finger protein 774 2 2
MIRT449005 ANKRD46 ankyrin repeat domain 46 2 2
MIRT449953 FMNL3 formin like 3 2 2
MIRT451155 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451624 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451693 C1RL complement C1r subcomponent like 2 2
MIRT452092 NUCB2 nucleobindin 2 2 2
MIRT452431 QDPR quinoid dihydropteridine reductase 2 2
MIRT452943 DISC1 disrupted in schizophrenia 1 2 2
MIRT453401 RHD Rh blood group D antigen 2 6
MIRT454164 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT454280 FXN frataxin 2 2
MIRT454539 RABL2A RAB, member of RAS oncogene family like 2A 2 2
MIRT454854 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455676 GLO1 glyoxalase I 2 2
MIRT457248 RABL2B RAB, member of RAS oncogene family like 2B 2 2
MIRT457677 ZNF587 zinc finger protein 587 2 2
MIRT457887 THEM6 thioesterase superfamily member 6 2 4
MIRT458016 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458279 FUT10 fucosyltransferase 10 2 2
MIRT459736 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT460453 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460500 FAM105A family with sequence similarity 105 member A 2 6
MIRT460938 NOA1 nitric oxide associated 1 2 4
MIRT461092 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461169 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461364 COL8A1 collagen type VIII alpha 1 chain 2 2
MIRT462382 YAE1D1 Yae1 domain containing 1 2 2
MIRT462780 ZNF8 zinc finger protein 8 2 2
MIRT463420 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463662 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT464265 VCL vinculin 2 2
MIRT465122 TSC22D2 TSC22 domain family member 2 2 4
MIRT466184 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466722 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT469102 RNF144B ring finger protein 144B 2 2
MIRT469714 RAB40C RAB40C, member RAS oncogene family 2 2
MIRT470425 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT470679 POLR2D RNA polymerase II subunit D 2 4
MIRT470861 PLXND1 plexin D1 2 2
MIRT471271 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471957 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472672 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 2 2
MIRT472739 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473134 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT473234 SMCR7L mitochondrial elongation factor 1 1 4
MIRT473828 MAP2K7 mitogen-activated protein kinase kinase 7 2 2
MIRT473940 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT474022 LRRC20 leucine rich repeat containing 20 2 2
MIRT474502 KLHDC8B kelch domain containing 8B 2 2
MIRT474766 KIAA0930 KIAA0930 2 2
MIRT474905 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT475331 IFNLR1 interferon lambda receptor 1 2 2
MIRT475379 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT475733 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT476548 GABPB1 GA binding protein transcription factor beta subunit 1 2 4
MIRT476973 FAM83G family with sequence similarity 83 member G 2 4
MIRT477534 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 2 4
MIRT477682 EFHD2 EF-hand domain family member D2 2 2
MIRT481201 ATXN7L3B ataxin 7 like 3B 2 4
MIRT481241 ATXN7L3 ataxin 7 like 3 2 2
MIRT481363 ATG9A autophagy related 9A 2 2
MIRT481388 ATG12 autophagy related 12 2 2
MIRT481652 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT481851 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT482184 AHR aryl hydrocarbon receptor 2 2
MIRT482220 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT485296 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT486659 ZNF28 zinc finger protein 28 2 2
MIRT489413 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491867 ZBTB5 zinc finger and BTB domain containing 5 2 8
MIRT492216 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492626 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT493323 LIMD2 LIM domain containing 2 2 2
MIRT493901 FAM43A family with sequence similarity 43 member A 2 4
MIRT494263 CEP120 centrosomal protein 120 2 2
MIRT494687 ARID3A AT-rich interaction domain 3A 2 2
MIRT495968 TBC1D19 TBC1 domain family member 19 2 2
MIRT496111 SNX17 sorting nexin 17 2 2
MIRT497875 SLC12A7 solute carrier family 12 member 7 2 2
MIRT498122 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT499405 PLCG2 phospholipase C gamma 2 2 4
MIRT499493 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 2
MIRT499653 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 2 2
MIRT499942 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT499997 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT500819 THBS1 thrombospondin 1 2 3
MIRT500902 STRN striatin 2 4
MIRT501118 SLC5A6 solute carrier family 5 member 6 2 4
MIRT501173 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT501241 SEMA4C semaphorin 4C 2 6
MIRT501328 RNFT1 ring finger protein, transmembrane 1 2 2
MIRT501355 RNF44 ring finger protein 44 2 4
MIRT501387 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT501441 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT501759 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501943 MBD2 methyl-CpG binding domain protein 2 2 8
MIRT502106 KPNA5 karyopherin subunit alpha 5 2 8
MIRT502130 KMT2D lysine methyltransferase 2D 2 4
MIRT502784 CEP135 centrosomal protein 135 2 2
MIRT502845 CELF1 CUGBP Elav-like family member 1 2 2
MIRT504789 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT505017 ZNF644 zinc finger protein 644 2 2
MIRT506942 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT507252 FIGN fidgetin, microtubule severing factor 2 8
MIRT507694 COIL coilin 2 6
MIRT508401 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508665 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT508932 AK4 adenylate kinase 4 2 4
MIRT510395 ZNF566 zinc finger protein 566 2 6
MIRT510518 YOD1 YOD1 deubiquitinase 2 6
MIRT511386 IKZF3 IKAROS family zinc finger 3 2 4
MIRT512745 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT515954 C9orf156 tRNA methyltransferase O 2 2
MIRT516083 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT523619 FZD9 frizzled class receptor 9 2 4
MIRT523733 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523990 DVL3 dishevelled segment polarity protein 3 2 2
MIRT524113 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT525727 SOD2 superoxide dismutase 2 2 2
MIRT527763 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT529727 OPRL1 opioid related nociceptin receptor 1 2 2
MIRT533187 WASL Wiskott-Aldrich syndrome like 2 6
MIRT536378 LEFTY1 left-right determination factor 1 2 2
MIRT543785 RBM12B RNA binding motif protein 12B 2 4
MIRT543868 SLC16A9 solute carrier family 16 member 9 2 2
MIRT545387 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545890 ZNF200 zinc finger protein 200 2 4
MIRT546334 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547373 MSI2 musashi RNA binding protein 2 2 2
MIRT547579 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548264 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT548351 EPHA4 EPH receptor A4 2 2
MIRT548534 DUSP1 dual specificity phosphatase 1 2 2
MIRT548560 DNAL1 dynein axonemal light chain 1 2 2
MIRT548779 COLEC12 collectin subfamily member 12 2 2
MIRT548978 CCNT2 cyclin T2 2 2
MIRT549208 BEND4 BEN domain containing 4 2 4
MIRT549763 ZNF611 zinc finger protein 611 2 6
MIRT549799 KIAA0391 KIAA0391 2 2
MIRT549847 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 2
MIRT550898 ACTA1 actin, alpha 1, skeletal muscle 2 2
MIRT551283 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551318 GSG2 histone H3 associated protein kinase 2 6
MIRT551932 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552003 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT552410 ZNF460 zinc finger protein 460 2 4
MIRT553013 USP38 ubiquitin specific peptidase 38 2 2
MIRT555550 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT555711 PDZD8 PDZ domain containing 8 2 2
MIRT557372 HAND1 heart and neural crest derivatives expressed 1 2 2
MIRT557960 FAM222B family with sequence similarity 222 member B 2 2
MIRT559087 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559497 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT561772 PEG10 paternally expressed 10 2 2
MIRT564402 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT565443 SURF4 surfeit 4 2 2
MIRT566518 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT567715 E2F6 E2F transcription factor 6 2 2
MIRT568655 ABHD17C abhydrolase domain containing 17C 2 2
MIRT569498 THYN1 thymocyte nuclear protein 1 2 2
MIRT573820 TGOLN2 trans-golgi network protein 2 2 2
MIRT574363 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT574750 GOLGA4 golgin A4 2 2
MIRT574788 FAM104A family with sequence similarity 104 member A 2 2
MIRT576089 Poteg POTE ankyrin domain family, member G 2 2
MIRT576812 Thbs1 thrombospondin 1 2 3
MIRT616370 RWDD1 RWD domain containing 1 2 2
MIRT617851 FMO4 flavin containing monooxygenase 4 2 2
MIRT642394 ZNF556 zinc finger protein 556 2 2
MIRT680519 PRIM2 DNA primase subunit 2 2 2
MIRT680547 ZNF584 zinc finger protein 584 2 2
MIRT680800 ZNF578 zinc finger protein 578 2 2
MIRT680838 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT681141 INTS7 integrator complex subunit 7 2 2
MIRT681271 RFC2 replication factor C subunit 2 2 2
MIRT681323 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT681359 BRI3BP BRI3 binding protein 2 2
MIRT681506 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681536 ZNF738 zinc finger protein 738 2 2
MIRT681658 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT681738 RAB19 RAB19, member RAS oncogene family 2 4
MIRT681797 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681869 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT681941 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682102 ITGA3 integrin subunit alpha 3 2 4
MIRT682181 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682238 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682384 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682444 MTX3 metaxin 3 2 2
MIRT682604 CPA4 carboxypeptidase A4 2 2
MIRT682640 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT689327 FPR1 formyl peptide receptor 1 2 2
MIRT689730 ATXN2 ataxin 2 2 2
MIRT691036 ZNF799 zinc finger protein 799 2 2
MIRT691935 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT694884 ZNF417 zinc finger protein 417 2 2
MIRT695255 ZNF443 zinc finger protein 443 2 2
MIRT695413 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT700589 PRSS22 protease, serine 22 2 2
MIRT701428 NHLRC2 NHL repeat containing 2 2 2
MIRT702484 KIAA1328 KIAA1328 2 2
MIRT702715 IPO9 importin 9 2 2
MIRT704028 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT704418 CTPS1 CTP synthase 1 2 2
MIRT705750 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT712373 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT713520 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT731263 FASLG Fas ligand 3 1
MIRT732697 Ccr7 chemokine (C-C motif) receptor 7 2 0
MIRT732700 Snhg12 small nucleolar RNA host gene 12 2 0
MIRT734626 SYT7 synaptotagmin 7 1 0
MIRT755829 UBQLN4 ubiquilin 4 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
let-7e Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
let-7e Hydroxamic acid HDACi LAQ824 NULL NULL Microarray breast cancer cell line SKBr3 16452179 2006 down-regulated
let-7e Doxorubicin approved 31703 Microarray ovarian cancer 19237188 2009 up-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
let-7e Etoposide approved 36462 Microarray Normal human fibroblasts (AG01522) 19633716 2009 up-regulated
let-7e Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
let-7e 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 down-regulated
let-7e Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
let-7e Marine fungal metabolite 1386A NULL NULL Microarray MCF-7 breast cancer cells. 22159329 2012 down-regulated
let-7e Ginsenoside Rh2 NULL 119307 Microarray NSCLC cell line A549 23152132 2013 down-regulated
let-7e 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) NULL 16078949 Microarray hepatocytes 23107762 2013 up-regulated
let-7e Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Doxorubicin 31703 NSC123127 approved resistant High Ovarian Cancer cell line (OV19, TOV21G, TOV112D, FUOV1, C13, OV2008, A2780CP, A2780S, IGROV1, T8, OVCAR5, IMCC3, A2008, OVCAR3, SKOV3, IOSER)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Tongue Squamous Cell Carcinoma cell line (Tca8113)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant High Colon Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer tissue and cell line (A2780)
hsa-let-7e Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Vincristine 5978 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive High Lung Adenocarcinoma cell line (A549)
hsa-let-7e Imatinib 5291 NSC743414 approved resistant High Gastrointestinal Stromal Tumor tissue
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Adenocarcinoma cell line (OE19)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer tissue and cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780, HO8910, ES2, CAOV3, SKOV3)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive Low Colorectal Cancer cell line (HCT-8)
hsa-let-7e Daunorubicin 30323 NSC82151 approved resistant High Acute Promyelocytic Leukemia cell line (HL60)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7C)
hsa-let-7e Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (PC-9)
hsa-let-7e Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Regorafenib 11167602 NSC763932 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-let-7e Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-let-7e 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-let-7e Ethanol+Tamoxifen resistant cell line (LY2)
hsa-let-7e Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-let-7e Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-let-7e Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-let-7e Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-let-7e Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-let-7e Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-let-7e-5p Alvocidib 5287969 NSC649890 resistant
hsa-let-7e-5p Ethyl, methoxy, prodigisine 135829283 NSC742418 resistant
hsa-let-7e-5p Platinum 23939 resistant Low Ovarian Cancer tissue
hsa-let-7e-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (AsPC-1)
hsa-let-7e-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-let-7e-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-let-7e-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-let-7e-5p Sunitinib 5329102 NSC750690 approved sensitive tissue (clear cell renal cell carcinoma)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-let-7e-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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