pre-miRNA Information
pre-miRNA hsa-let-7e   
Genomic Coordinates chr19: 51692786 - 51692864
Synonyms MIRNLET7E, hsa-let-7e, let-7e, MIRLET7E
Description Homo sapiens let-7e stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-let-7e-5p
Sequence 8| UGAGGUAGGAGGUUGUAUAGUU |29
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1189776118 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol UTP15   
Synonyms NET21
Description UTP15, small subunit processome component
Transcript NM_032175   
Expression
Putative miRNA Targets on UTP15
3'UTR of UTP15
(miRNA target sites are highlighted)
>UTP15|NM_032175|3'UTR
   1 TGTCTGCTAAATAAGACATATAAGAACTCTGAAGTTGGAATAGATTTGACTGTATTAAATGTTGGCGAGAGACTCTCTTT
  81 GATACATTAAAAAAACTGTTTGCAGAAGCAGTTCTGTGGAAGAGACTGGAATAATTATGGCCGGAAAACAAGTACCCGTT
 161 TTAAGTAAGACATGGTTTTCCATGTAATATTTTGAATTATAGCATCTTCACCTAGAAGATCTCAATTGTCTTAGTCACAG
 241 AGTAGGTTTATCTGGGATGGATATTAATTTTAATACAGGAGTGTTCTGTATCAACATTTGGGTTGGTATTCAGATGGGAA
 321 TTCAAATATGAATCCTCTCTGGAGAGGGTCCAACTGGGAATCCTGCTAAAGGAGCAAAGCCTTGTATTACCTCTGGAAGA
 401 CAACAAAAACAATTGGCAACAACAAAAAGCCTCTTTCTTGACTTTAATCAGTGCCTTTGGGATTTCTAGGCCCTTGCTTA
 481 GCTTGCTTCCTGTCTCCTTGATATCTACACTTGTCTTAGATCACATGCCCTGCTTCAGCTGGTAATGGGACTGCATCGGT
 561 TCCAAGTGTGGCAAGTAAGTTTTCGGCTCTGAAGAACTGACACTAGCTAGATTTGTATTCAGAGTGTGAGAGCAAGCTCT
 641 ACAGATAGACCTTATTGGACTACTTTTTTTTTTTTCTTCATGCAGCCTTTCTACCAAGTTTTCACCTTGTTTCAGGTCAG
 721 AGGAATGATAGAATTTGTCATTTTTCTTACAACAGCCTTTCAGACTATTCTTCATATGTTTCAAGCTAATCTTGTAGCTA
 801 AGCTACCTAATCCTCTGAAAACTGTTTTCTCTGATTTGTATTTAGATTCCTCCCCCCATTATTCACAATCATATTGTATT
 881 TCGGAACCCCAATGCAGAGCAGTTTGCTTTGAAAAATAGTTGTTTTTAAAAGTTTAATGTAAATAATTATTTTTTAGAAG
 961 TTTTTTTTTTTTTTTTAAAGACAGGGTCTCGCTTTATCGCCCAGGCTGGAGTACAGTGATGCAATCTCAGTCCACTGCAA
1041 CCTCTGCCCTCCCGGGTTTAAGCAGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCCCCACCACGCC
1121 TGGCTAATTTTTGTAGTTTTAGTAGAGACGGGGTTTCACCTTACCGGGCTGGTCTAAAACTCCTGACCTCAAGTGATCTA
1201 CCTGCCTCTGCCTCCCGAAGTGCTTGGATTACAGGTGTGAGCCACTGTGTCCAGCCTGTAACTATTATTTTTTTATAAAG
1281 AGAGATTCTTATTTTCTTGGCTTTTTGATGTATCTGTTCCTGATAGATAATCATTGGCTAGTAACTCCTAGTACACTGGT
1361 TTCACAGTTGCTACCTCTCCTGCTTTTCTCTAATTATTACGCCAACTCAAGTAGTTAAAAATCAGTAAGAAAAATGTCTT
1441 GAGCTAGAAGAACCCATAGAGGAAGATTTTGTAATGCGAATCTCCTCTCATAATTTTAGTTCTGTAAATTCAGGGTTTTT
1521 TTTTGTTTTTTTGTTTTTTTTAAGCCGAAAAAATGCTTAATATGTTCCAGTAAGGGTATTAAGTAAAAATTAAATAAACG
1601 TATTAAGTTTAACATATTAAATTAATTTAACATTTAGACTAACATTAACATTTAAATTAATATGTTAAGTGAATATACTT
1681 AATATATTCTAGTACAGGTATGCTTGGAAATAGGGCGTTTCCTTTTCATGAATTGATTTCGTACAGCACAGTGGCTTATA
1761 AGGAACCAGCAGTGTTTTTCCCTGAGTAATTATGAACTTAGTCAAGATCAGAAGCTGGGTTTTGGGGTTGAGAAGAGTTC
1841 ATTTATTTAAATAAAGTTTCTATTTAAAAACCTTTTTAAAAAGTTAACATCATAAATATTCTGATAATTTGCATAGTAGT
1921 AAAAATTAGAAGTTGAAATTCTACCTAAAGCTGTAGTTGCCGTCAATTGTGTAACATGTGACAAAGGTTTTCCCATATGT
2001 CATTTCATTTGATTCTCACCACAACCATCCAAGGTTGATGTTATTCTCATTTAACATTGAGTTAACGAAAGTAGTTGATT
2081 CACTCTCGAAGTCCCTGAGTGTGAGCTCTTCATCCTAGCACTGTGAAGTGGTTTGCCTGCTGGGGCCTAAACTCCTCATT
2161 CCCTTTAACAAAGCTTCACTGAGTGCTGCAGTTCTCAAAATATGTAACAGTTAACACATTTTTCAAACAGGTTAGGAAGC
2241 AATTCCCATAGCCATCAATACTTAAATTCAGGAGTACTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTAGAGACAAGGTCT
2321 CTTTCTGTTGTCCAGGCTGGAGTGTAGTGGTGTGATCATAGCTCACTGCAGCTTCTGTCTCCTAGGCTGAAGCTATCCTC
2401 CCACCTCAGCCTCCTGAGAAGCTGGGGCTACAGGGATGAGCCACCATGCCCAGCTAATTTTTTATTTTGATTTTTTGAGA
2481 TAAGAGGTCTCACCATGTTGCCCAGGCCTGAGGCAATCTCCTGGTTTCAAGCAATCTTCCCACCTCAGCCTCCTTAATGA
2561 CTGGGATTAAAGGCATGAGCCACTGCGCCCAGCAGGAATGGTTATTATATTCATTGAGATAAACTGTAGTATTTGCTGTT
2641 TGAAGTATTTAAACATAATTGGCATATTACAATATGTGACACTGGCCTTAAGATTCTAATTTAAAATGCTTAACAGACTT
2721 TTAGACTTATGAGTTTCAGTTGAAAGGTATTTTAAAATGTTACTAAGTCTGCAAAAGTACTGAAATGTTTCAGAGAACTT
2801 GGAAAGTCACCGTATGTTTAATTTATTATGTTTATGAGATTTAAGCACTTGGGAAGGTTTATGCTAATGGGGTCAAGCAT
2881 TTGCAATGCTGCTTAAAAGAATCATTTTTTTAAATGTATAAATGCTATTAAGTTGTTTAAAGGAATTTGAATTGTAAATG
2961 GGATTGTTAAAACAAATTTAGTCTGTTCAACTCAATGAGGGCATTTCATTTTCTAGGAACAAAATACCCTCTTAGACATT
3041 AAAAAGCCGCATGCCTGTTCCCTCAGCTATAGTTAACTGGACCATGGTGGTACAACTGACTCAACCCTTCTCTAAGCAGG
3121 GATTTGTAATTGGGATTTATAATGAAATTCCTGATCTGGGAAAATGGGAGGCTGGGAATGCTATGTCTAGGTCATCAGCG
3201 GAGAAAGTTGGTTTGTAGAGAATGAACAAGAATGAAACCTAAGTGCAAAGAAAATAAAGATTATCCTGCTTTAATAGTTC
3281 AGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uuGAUAUGUU-GGAGGAUGGAGu 5'
            :|| :||: :|||||:|||| 
Target 5' gtTTAAGCAGTTCTCCTGCCTCa 3'
1056 - 1078 152.00 -21.30
2
miRNA  3' uugauaUGUUGGAGGAUGGAGu 5'
                |||: :| ||||||| 
Target 5' ggtttcACAG-TTGCTACCTCt 3'
1358 - 1378 151.00 -15.10
3
miRNA  3' uuGA-UAUGUUGGA-GGAUGGAGu 5'
            || | :::|:|| |||:|||| 
Target 5' acCTCAAGTGATCTACCTGCCTCt 3'
1186 - 1209 144.00 -16.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31509115 4 COSMIC
COSN26670727 16 COSMIC
COSN14178036 67 COSMIC
COSN30118950 96 COSMIC
COSN16215557 117 COSMIC
COSN20075393 144 COSMIC
COSN17183283 159 COSMIC
COSN16205846 201 COSMIC
COSN2116720 676 COSMIC
COSN27305306 676 COSMIC
COSN2116721 787 COSMIC
COSN9956544 915 COSMIC
COSN20101360 977 COSMIC
COSN9956545 1177 COSMIC
COSN21142791 1457 COSMIC
COSN8228959 1517 COSMIC
COSN25477939 1530 COSMIC
COSN25477940 1542 COSMIC
COSN20374605 1663 COSMIC
COSN20101361 1664 COSMIC
COSN9456550 2287 COSMIC
COSN26610865 2595 COSMIC
COSN7579147 2913 COSMIC
COSN14756099 3050 COSMIC
COSN16207227 3166 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs769046591 2 dbSNP
rs774747198 4 dbSNP
rs376764935 10 dbSNP
rs1245634644 12 dbSNP
rs766209850 16 dbSNP
rs776278321 17 dbSNP
rs1033354464 21 dbSNP
rs759587950 22 dbSNP
rs371345501 28 dbSNP
rs1159869746 30 dbSNP
rs752255499 36 dbSNP
rs757929383 37 dbSNP
rs763552405 39 dbSNP
rs1349502091 40 dbSNP
rs1437359938 41 dbSNP
rs751213943 42 dbSNP
rs1339154781 43 dbSNP
rs756798738 44 dbSNP
rs781663087 45 dbSNP
rs1320370290 46 dbSNP
rs373358747 47 dbSNP
rs1288780697 51 dbSNP
rs1378765698 52 dbSNP
rs530015123 63 dbSNP
rs1445027663 66 dbSNP
rs548461066 67 dbSNP
rs1027878895 68 dbSNP
rs1304092050 69 dbSNP
rs1349851161 72 dbSNP
rs1215321587 84 dbSNP
rs951023022 87 dbSNP
rs983662832 90 dbSNP
rs1350842350 95 dbSNP
rs1293575805 102 dbSNP
rs968575130 104 dbSNP
rs1341455252 109 dbSNP
rs1434914184 111 dbSNP
rs343120 117 dbSNP
rs927109828 118 dbSNP
rs376635373 133 dbSNP
rs868078425 143 dbSNP
rs1399553143 144 dbSNP
rs1361790939 150 dbSNP
rs1358635141 157 dbSNP
rs974757443 158 dbSNP
rs1425484803 159 dbSNP
rs1367711455 173 dbSNP
rs1292187418 174 dbSNP
rs185918618 179 dbSNP
rs343119 201 dbSNP
rs1192846714 203 dbSNP
rs571602024 205 dbSNP
rs935987494 211 dbSNP
rs1222794881 219 dbSNP
rs115764750 222 dbSNP
rs1451182228 226 dbSNP
rs915184846 229 dbSNP
rs537524477 232 dbSNP
rs1309630741 237 dbSNP
rs941575967 243 dbSNP
rs945285236 245 dbSNP
rs1399877035 247 dbSNP
rs1304992351 254 dbSNP
rs112432809 263 dbSNP
rs1390354561 280 dbSNP
rs531792578 282 dbSNP
rs899995578 285 dbSNP
rs1169889234 287 dbSNP
rs1404164633 289 dbSNP
rs73117987 295 dbSNP
rs1054860345 316 dbSNP
rs1199562342 318 dbSNP
rs890180337 321 dbSNP
rs1318573844 322 dbSNP
rs759767968 329 dbSNP
rs1481833349 335 dbSNP
rs1010327835 339 dbSNP
rs1453643457 341 dbSNP
rs1284636319 345 dbSNP
rs1218599030 346 dbSNP
rs765712994 351 dbSNP
rs994543182 353 dbSNP
rs1027716884 354 dbSNP
rs951029966 355 dbSNP
rs1234130261 357 dbSNP
rs1330591177 363 dbSNP
rs968627582 365 dbSNP
rs1226346048 366 dbSNP
rs1005510105 382 dbSNP
rs978634395 387 dbSNP
rs1034178803 392 dbSNP
rs958528701 400 dbSNP
rs1408269545 405 dbSNP
rs776057999 413 dbSNP
rs1173073994 415 dbSNP
rs1477413004 423 dbSNP
rs966156373 430 dbSNP
rs1375375150 434 dbSNP
rs974811476 439 dbSNP
rs1419265256 440 dbSNP
rs550167784 441 dbSNP
rs1237158772 442 dbSNP
rs992636051 443 dbSNP
rs1286288113 448 dbSNP
rs922048835 451 dbSNP
rs1201457547 453 dbSNP
rs930053463 456 dbSNP
rs1273101480 470 dbSNP
rs1241481867 479 dbSNP
rs868230539 483 dbSNP
rs1245643630 485 dbSNP
rs983211943 486 dbSNP
rs909872188 491 dbSNP
rs1334764986 505 dbSNP
rs867018629 510 dbSNP
rs1462421540 511 dbSNP
rs536962452 523 dbSNP
rs1159837599 524 dbSNP
rs1419750581 526 dbSNP
rs957666137 528 dbSNP
rs1176393517 529 dbSNP
rs990205392 530 dbSNP
rs934163729 543 dbSNP
rs1188878964 554 dbSNP
rs1160604817 558 dbSNP
rs913216653 563 dbSNP
rs763375603 571 dbSNP
rs1042289610 582 dbSNP
rs927800711 585 dbSNP
rs537419240 586 dbSNP
rs1157093724 587 dbSNP
rs553279716 588 dbSNP
rs1238174521 599 dbSNP
rs1054954557 602 dbSNP
rs894919565 603 dbSNP
rs1333775162 604 dbSNP
rs1338878986 612 dbSNP
rs1284533046 621 dbSNP
rs1446981763 627 dbSNP
rs573190106 632 dbSNP
rs1019935354 636 dbSNP
rs904187805 642 dbSNP
rs1281041856 654 dbSNP
rs1000107909 660 dbSNP
rs1034231085 664 dbSNP
rs1416451234 664 dbSNP
rs1351085643 676 dbSNP
rs78230777 676 dbSNP
rs1227698047 677 dbSNP
rs1265768614 679 dbSNP
rs1325076375 680 dbSNP
rs1200470973 681 dbSNP
rs930388233 687 dbSNP
rs993083060 690 dbSNP
rs1440296160 691 dbSNP
rs144775278 695 dbSNP
rs1184470921 707 dbSNP
rs1488667379 719 dbSNP
rs1024124589 720 dbSNP
rs1233788431 722 dbSNP
rs1214766124 734 dbSNP
rs1048727484 750 dbSNP
rs886064630 751 dbSNP
rs1353990118 758 dbSNP
rs13168040 764 dbSNP
rs1432015150 768 dbSNP
rs962709076 771 dbSNP
rs975379257 774 dbSNP
rs1019124910 775 dbSNP
rs1295768737 777 dbSNP
rs921530125 779 dbSNP
rs1350155178 781 dbSNP
rs148568571 783 dbSNP
rs1051722815 787 dbSNP
rs1405207620 791 dbSNP
rs574093726 795 dbSNP
rs1478413798 797 dbSNP
rs1423502266 801 dbSNP
rs113936966 810 dbSNP
rs767426944 814 dbSNP
rs1489498696 822 dbSNP
rs1221024839 823 dbSNP
rs1411846581 823 dbSNP
rs544343130 825 dbSNP
rs1370933591 839 dbSNP
rs1408919904 841 dbSNP
rs343118 858 dbSNP
rs1317261687 859 dbSNP
rs1224876986 866 dbSNP
rs752535302 869 dbSNP
rs529801735 870 dbSNP
rs1433796413 875 dbSNP
rs967759598 879 dbSNP
rs978018807 882 dbSNP
rs542041930 883 dbSNP
rs1466453449 893 dbSNP
rs1400286335 895 dbSNP
rs183795492 896 dbSNP
rs1434987688 902 dbSNP
rs1342497375 920 dbSNP
rs999825522 929 dbSNP
rs990693239 939 dbSNP
rs1190849381 940 dbSNP
rs1055358850 945 dbSNP
rs1477139473 950 dbSNP
rs916363476 953 dbSNP
rs1179074549 960 dbSNP
rs1491050070 961 dbSNP
rs370495437 961 dbSNP
rs572106117 961 dbSNP
rs771149947 961 dbSNP
rs930411641 961 dbSNP
rs560476200 962 dbSNP
rs886117019 963 dbSNP
rs940390289 965 dbSNP
rs1448070796 977 dbSNP
rs866211783 977 dbSNP
rs1271724598 978 dbSNP
rs1376540543 985 dbSNP
rs111902250 987 dbSNP
rs1359847489 989 dbSNP
rs902142642 991 dbSNP
rs951244579 992 dbSNP
rs996375992 999 dbSNP
rs1004416010 1000 dbSNP
rs1183561941 1002 dbSNP
rs1168716860 1010 dbSNP
rs553213748 1013 dbSNP
rs1389718592 1014 dbSNP
rs1017039949 1030 dbSNP
rs1355228182 1031 dbSNP
rs1286296053 1036 dbSNP
rs1238904296 1039 dbSNP
rs1353469744 1049 dbSNP
rs1305254943 1053 dbSNP
rs1428895647 1054 dbSNP
rs1289374536 1055 dbSNP
rs1445995720 1058 dbSNP
rs867673814 1068 dbSNP
rs2703656 1069 dbSNP
rs566793333 1084 dbSNP
rs962761118 1092 dbSNP
rs975431664 1093 dbSNP
rs1029171267 1101 dbSNP
rs1378667683 1102 dbSNP
rs1166718926 1104 dbSNP
rs1424163431 1106 dbSNP
rs112784184 1111 dbSNP
rs1179983113 1114 dbSNP
rs1488994551 1118 dbSNP
rs1011680315 1119 dbSNP
rs1020759971 1122 dbSNP
rs1487126070 1126 dbSNP
rs1266818948 1128 dbSNP
rs967444527 1129 dbSNP
rs1322687949 1144 dbSNP
rs570328402 1145 dbSNP
rs987060625 1148 dbSNP
rs187270041 1150 dbSNP
rs945566673 1151 dbSNP
rs1298926754 1154 dbSNP
rs1399455908 1165 dbSNP
rs76939331 1166 dbSNP
rs772940592 1169 dbSNP
rs960649041 1177 dbSNP
rs990694815 1183 dbSNP
rs1367620749 1185 dbSNP
rs777593539 1194 dbSNP
rs1162627886 1197 dbSNP
rs746925285 1199 dbSNP
rs1340977892 1203 dbSNP
rs1424210147 1212 dbSNP
rs1192358636 1213 dbSNP
rs569438869 1217 dbSNP
rs984626465 1218 dbSNP
rs1489018725 1223 dbSNP
rs1489127590 1228 dbSNP
rs907640465 1241 dbSNP
rs1265801955 1242 dbSNP
rs767075554 1247 dbSNP
rs770922040 1254 dbSNP
rs370732768 1255 dbSNP
rs1189242179 1268 dbSNP
rs922907352 1278 dbSNP
rs932240508 1281 dbSNP
rs1051093757 1283 dbSNP
rs893317914 1290 dbSNP
rs1016755435 1292 dbSNP
rs1323696030 1298 dbSNP
rs1166531690 1309 dbSNP
rs1012189878 1310 dbSNP
rs1466969269 1320 dbSNP
rs1386844241 1322 dbSNP
rs1041874309 1328 dbSNP
rs903309153 1336 dbSNP
rs1378804978 1341 dbSNP
rs545309207 1346 dbSNP
rs536496394 1354 dbSNP
rs115231160 1356 dbSNP
rs1383450318 1366 dbSNP
rs1192217945 1372 dbSNP
rs190568310 1375 dbSNP
rs1459366965 1376 dbSNP
rs142067900 1378 dbSNP
rs987166395 1380 dbSNP
rs1337561219 1397 dbSNP
rs144155450 1401 dbSNP
rs1234022103 1402 dbSNP
rs1301506930 1403 dbSNP
rs182749050 1409 dbSNP
rs1317690682 1410 dbSNP
rs1021213800 1412 dbSNP
rs1377274552 1415 dbSNP
rs951978214 1416 dbSNP
rs577119817 1417 dbSNP
rs1403757722 1422 dbSNP
rs1244444703 1425 dbSNP
rs985069031 1428 dbSNP
rs1264224661 1441 dbSNP
rs1465098479 1441 dbSNP
rs1392954124 1444 dbSNP
rs907705135 1455 dbSNP
rs868156769 1456 dbSNP
rs1160013393 1463 dbSNP
rs1441945352 1471 dbSNP
rs1239123134 1472 dbSNP
rs961777289 1478 dbSNP
rs187019687 1479 dbSNP
rs544693306 1480 dbSNP
rs925442176 1482 dbSNP
rs935786808 1482 dbSNP
rs191661205 1489 dbSNP
rs1344390564 1493 dbSNP
rs556427708 1506 dbSNP
rs931620775 1511 dbSNP
rs1354175947 1516 dbSNP
rs574864880 1516 dbSNP
rs1342256068 1517 dbSNP
rs74345509 1517 dbSNP
rs887051760 1518 dbSNP
rs1394952724 1525 dbSNP
rs1299682940 1526 dbSNP
rs939902626 1526 dbSNP
rs1379275210 1534 dbSNP
rs1419890772 1534 dbSNP
rs757297604 1534 dbSNP
rs898321650 1536 dbSNP
rs560370063 1547 dbSNP
rs1370766967 1548 dbSNP
rs1028408953 1557 dbSNP
rs763281071 1566 dbSNP
rs891169690 1574 dbSNP
rs1219110867 1576 dbSNP
rs947663030 1579 dbSNP
rs1488762047 1589 dbSNP
rs1424204559 1591 dbSNP
rs1042314763 1592 dbSNP
rs113724052 1600 dbSNP
rs1358122886 1600 dbSNP
rs1458729106 1601 dbSNP
rs1002975434 1603 dbSNP
rs150383258 1605 dbSNP
rs894548905 1607 dbSNP
rs1013354487 1611 dbSNP
rs1400059656 1614 dbSNP
rs1455126326 1616 dbSNP
rs1338306561 1617 dbSNP
rs1399324085 1618 dbSNP
rs774721933 1619 dbSNP
rs1164361543 1622 dbSNP
rs1379380780 1644 dbSNP
rs1416288397 1644 dbSNP
rs1395840028 1645 dbSNP
rs1026983972 1651 dbSNP
rs1310986980 1652 dbSNP
rs1241752635 1654 dbSNP
rs113261326 1656 dbSNP
rs148784565 1661 dbSNP
rs67046428 1661 dbSNP
rs766054315 1661 dbSNP
rs201976782 1665 dbSNP
rs200548986 1666 dbSNP
rs1006102070 1672 dbSNP
rs1267657826 1676 dbSNP
rs538996874 1680 dbSNP
rs1332652610 1702 dbSNP
rs961831258 1703 dbSNP
rs959535767 1710 dbSNP
rs975817831 1717 dbSNP
rs762319775 1718 dbSNP
rs1256846548 1723 dbSNP
rs1483032803 1734 dbSNP
rs915677581 1741 dbSNP
rs531162901 1742 dbSNP
rs1392988019 1753 dbSNP
rs753410876 1759 dbSNP
rs953140193 1771 dbSNP
rs1418832929 1774 dbSNP
rs1185032642 1782 dbSNP
rs1479153961 1783 dbSNP
rs549748535 1784 dbSNP
rs779606888 1790 dbSNP
rs949817213 1794 dbSNP
rs1192840680 1801 dbSNP
rs759014432 1803 dbSNP
rs1259915471 1811 dbSNP
rs1199127280 1820 dbSNP
rs568095593 1824 dbSNP
rs1316771435 1826 dbSNP
rs182322416 1829 dbSNP
rs548395106 1833 dbSNP
rs1367926768 1842 dbSNP
rs1471335664 1847 dbSNP
rs1273865876 1852 dbSNP
rs61732100 1856 dbSNP
rs1369165862 1860 dbSNP
rs977644646 1863 dbSNP
rs1333978075 1871 dbSNP
rs534227168 1872 dbSNP
rs1354434991 1873 dbSNP
rs1168491143 1876 dbSNP
rs924785662 1887 dbSNP
rs1178217682 1889 dbSNP
rs1416231460 1912 dbSNP
rs1426224333 1913 dbSNP
rs938858163 1953 dbSNP
rs1452352798 1961 dbSNP
rs764918008 1963 dbSNP
rs752298165 1966 dbSNP
rs772696293 1967 dbSNP
rs1359420727 1976 dbSNP
rs1480291173 1982 dbSNP
rs1057300273 1983 dbSNP
rs1211687916 1987 dbSNP
rs1465212922 1991 dbSNP
rs1301513818 1994 dbSNP
rs758159468 1997 dbSNP
rs1279180422 2007 dbSNP
rs1231564257 2014 dbSNP
rs1372790430 2021 dbSNP
rs1410745702 2034 dbSNP
rs939952197 2035 dbSNP
rs187540445 2036 dbSNP
rs571119489 2038 dbSNP
rs1373325988 2039 dbSNP
rs1225477560 2040 dbSNP
rs898375349 2044 dbSNP
rs370964516 2047 dbSNP
rs868758016 2058 dbSNP
rs865885225 2060 dbSNP
rs1433046869 2062 dbSNP
rs193280713 2067 dbSNP
rs1159078938 2068 dbSNP
rs777558984 2069 dbSNP
rs1014765567 2074 dbSNP
rs897734388 2082 dbSNP
rs1183456557 2086 dbSNP
rs902520522 2087 dbSNP
rs1256148803 2089 dbSNP
rs1205544093 2099 dbSNP
rs1489096904 2099 dbSNP
rs1286271038 2100 dbSNP
rs997328254 2108 dbSNP
rs543007265 2122 dbSNP
rs1032564809 2127 dbSNP
rs1230474022 2140 dbSNP
rs953285399 2144 dbSNP
rs985867423 2146 dbSNP
rs1021713650 2155 dbSNP
rs968381930 2156 dbSNP
rs959588220 2157 dbSNP
rs116994135 2162 dbSNP
rs757278762 2174 dbSNP
rs1299026788 2178 dbSNP
rs1452794019 2179 dbSNP
rs924879127 2186 dbSNP
rs1166869200 2188 dbSNP
rs1425240680 2196 dbSNP
rs781273253 2204 dbSNP
rs938910617 2210 dbSNP
rs1478515742 2214 dbSNP
rs1432304370 2219 dbSNP
rs1263466582 2220 dbSNP
rs1204130313 2229 dbSNP
rs1485756554 2232 dbSNP
rs971202427 2234 dbSNP
rs1173522331 2235 dbSNP
rs1391570375 2240 dbSNP
rs1336169511 2241 dbSNP
rs993028902 2243 dbSNP
rs1307776323 2249 dbSNP
rs1342375482 2251 dbSNP
rs981588581 2253 dbSNP
rs1381824444 2254 dbSNP
rs1360096038 2258 dbSNP
rs1295120738 2264 dbSNP
rs1395338938 2271 dbSNP
rs1458211080 2273 dbSNP
rs1369299776 2277 dbSNP
rs1162627242 2281 dbSNP
rs908245122 2281 dbSNP
rs1423657665 2289 dbSNP
rs745987729 2306 dbSNP
rs1192057839 2311 dbSNP
rs1294266281 2315 dbSNP
rs1426408454 2316 dbSNP
rs1268989956 2317 dbSNP
rs1193342680 2330 dbSNP
rs1469183764 2331 dbSNP
rs1252925306 2337 dbSNP
rs1212300513 2348 dbSNP
rs1320134226 2349 dbSNP
rs1252006989 2350 dbSNP
rs961032382 2353 dbSNP
rs1367007265 2365 dbSNP
rs1306043685 2380 dbSNP
rs1217492590 2387 dbSNP
rs1298030879 2389 dbSNP
rs916045614 2393 dbSNP
rs185639992 2399 dbSNP
rs1228915584 2401 dbSNP
rs1048450533 2404 dbSNP
rs919852994 2407 dbSNP
rs932532183 2412 dbSNP
rs888458443 2414 dbSNP
rs776121141 2420 dbSNP
rs912372151 2423 dbSNP
rs780450745 2443 dbSNP
rs1340034422 2449 dbSNP
rs1460011368 2458 dbSNP
rs1379075048 2465 dbSNP
rs1223668228 2471 dbSNP
rs1176248641 2472 dbSNP
rs897788111 2481 dbSNP
rs944175041 2481 dbSNP
rs1247144107 2486 dbSNP
rs535927070 2488 dbSNP
rs997382172 2492 dbSNP
rs1459518025 2494 dbSNP
rs749489970 2496 dbSNP
rs1188911258 2498 dbSNP
rs538239458 2505 dbSNP
rs1249552686 2508 dbSNP
rs1479661943 2519 dbSNP
rs768927404 2526 dbSNP
rs888917469 2535 dbSNP
rs1168413546 2540 dbSNP
rs1346917388 2554 dbSNP
rs1388706839 2557 dbSNP
rs1053689541 2564 dbSNP
rs1242019871 2565 dbSNP
rs73117988 2566 dbSNP
rs1021400420 2572 dbSNP
rs968854198 2573 dbSNP
rs1012898193 2581 dbSNP
rs762054892 2584 dbSNP
rs1166131510 2587 dbSNP
rs572230977 2588 dbSNP
rs1031333896 2594 dbSNP
rs368778203 2596 dbSNP
rs1441927434 2605 dbSNP
rs1364887541 2606 dbSNP
rs1434437927 2607 dbSNP
rs1417432285 2608 dbSNP
rs564271700 2612 dbSNP
rs960284805 2615 dbSNP
rs993040316 2619 dbSNP
rs916082026 2620 dbSNP
rs1485493597 2630 dbSNP
rs1434625417 2631 dbSNP
rs1296683802 2638 dbSNP
rs1359611418 2646 dbSNP
rs576277825 2649 dbSNP
rs1218601940 2650 dbSNP
rs1229761116 2656 dbSNP
rs984682057 2662 dbSNP
rs1236732214 2663 dbSNP
rs543077883 2665 dbSNP
rs1341778353 2667 dbSNP
rs1290534230 2677 dbSNP
rs1293426439 2685 dbSNP
rs1321017716 2696 dbSNP
rs909992013 2698 dbSNP
rs1299584034 2703 dbSNP
rs940107028 2715 dbSNP
rs1386075731 2719 dbSNP
rs1158532402 2722 dbSNP
rs1218806381 2724 dbSNP
rs34786494 2724 dbSNP
rs1469086224 2725 dbSNP
rs919574506 2727 dbSNP
rs528882918 2731 dbSNP
rs1474917758 2736 dbSNP
rs985778779 2739 dbSNP
rs1196039917 2771 dbSNP
rs1465121205 2778 dbSNP
rs1187549399 2781 dbSNP
rs1245761118 2793 dbSNP
rs1283246802 2799 dbSNP
rs922572853 2806 dbSNP
rs1358458297 2810 dbSNP
rs1273736617 2812 dbSNP
rs386689015 2812 dbSNP
rs343117 2813 dbSNP
rs56060970 2814 dbSNP
rs1404070130 2828 dbSNP
rs1279725442 2830 dbSNP
rs1430964344 2831 dbSNP
rs343116 2841 dbSNP
rs1007413448 2846 dbSNP
rs1318124462 2848 dbSNP
rs924045094 2851 dbSNP
rs560314061 2857 dbSNP
rs936738485 2868 dbSNP
rs1456711536 2872 dbSNP
rs1460997347 2876 dbSNP
rs1318799614 2879 dbSNP
rs879460870 2906 dbSNP
rs1475887315 2910 dbSNP
rs527925180 2914 dbSNP
rs764660497 2932 dbSNP
rs998570940 2943 dbSNP
rs1031343714 2945 dbSNP
rs1469596034 2953 dbSNP
rs1253564195 2960 dbSNP
rs552726273 2963 dbSNP
rs1284548691 2966 dbSNP
rs1012542770 2968 dbSNP
rs1047090396 2972 dbSNP
rs571091395 2976 dbSNP
rs1338406712 2977 dbSNP
rs1014527374 2979 dbSNP
rs1429065131 2980 dbSNP
rs1373568396 2984 dbSNP
rs752323642 2986 dbSNP
rs1392879472 2989 dbSNP
rs1378422691 2991 dbSNP
rs970698282 3002 dbSNP
rs113424557 3003 dbSNP
rs549931893 3008 dbSNP
rs1410601590 3026 dbSNP
rs1005475959 3027 dbSNP
rs770482601 3028 dbSNP
rs910035210 3031 dbSNP
rs961450449 3034 dbSNP
rs762616009 3038 dbSNP
rs879737822 3041 dbSNP
rs879862856 3047 dbSNP
rs1207502780 3049 dbSNP
rs528273811 3050 dbSNP
rs1467123697 3053 dbSNP
rs1050170890 3056 dbSNP
rs751408596 3062 dbSNP
rs1204683054 3070 dbSNP
rs1026685405 3072 dbSNP
rs910507633 3083 dbSNP
rs985108890 3085 dbSNP
rs757110486 3086 dbSNP
rs1237247321 3087 dbSNP
rs1472131819 3088 dbSNP
rs1184976595 3097 dbSNP
rs1413267731 3101 dbSNP
rs943271688 3104 dbSNP
rs1042901955 3106 dbSNP
rs904316269 3107 dbSNP
rs1300349324 3108 dbSNP
rs998623452 3110 dbSNP
rs1443040988 3111 dbSNP
rs1156980664 3113 dbSNP
rs1353963491 3116 dbSNP
rs1327144330 3121 dbSNP
rs1436864100 3127 dbSNP
rs767617486 3131 dbSNP
rs1172840711 3140 dbSNP
rs1019962459 3142 dbSNP
rs965299138 3144 dbSNP
rs1177652574 3145 dbSNP
rs1469199762 3149 dbSNP
rs1230634424 3165 dbSNP
rs343115 3166 dbSNP
rs1013945624 3168 dbSNP
rs1412642001 3171 dbSNP
rs149098410 3188 dbSNP
rs1310752893 3189 dbSNP
rs1350993355 3190 dbSNP
rs372156721 3196 dbSNP
rs756297497 3197 dbSNP
rs916632880 3200 dbSNP
rs539297621 3201 dbSNP
rs867114662 3212 dbSNP
rs557911585 3232 dbSNP
rs1017106326 3241 dbSNP
rs1416680312 3244 dbSNP
rs1356419432 3247 dbSNP
rs1346753012 3261 dbSNP
rs1432648007 3263 dbSNP
rs1219440967 3270 dbSNP
rs1277390939 3282 dbSNP
rs1484903222 3284 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Flp-In T-REx 293-hAGO1 cells
Location of target site 3'UTR
Original Description (Extracted from the article) ... Validation of interactions identified by CLASH suppports their reliability. ...

- Helwak A; Kudla G; Dudnakova T; Tollervey D, 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uugAUAUGUU-GGAGGAUGGAGu 5'
             || :||: :|||||:|||| 
Target 5' ---TAAGCAGTTCTCCTGCCTCa 3'
1 - 20
Article - Helwak A; Kudla G; Dudnakova T; Tollervey D
- Cell, 2013
MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide an unbiased view of human miRNA targets, we developed a technique for ligation and sequencing of miRNA-target RNA duplexes associated with human AGO1. Here, we report data sets of more than 18,000 high-confidence miRNA-mRNA interactions. The binding of most miRNAs includes the 5' seed region, but around 60% of seed interactions are noncanonical, containing bulged or mismatched nucleotides. Moreover, seed interactions are generally accompanied by specific, nonseed base pairing. 18% of miRNA-mRNA interactions involve the miRNA 3' end, with little evidence for 5' contacts, and some of these were functionally validated. Analyses of miRNA:mRNA base pairing showed that miRNA species systematically differ in their target RNA interactions, and strongly overrepresented motifs were found in the interaction sites of several miRNAs. We speculate that these affect the response of RISC to miRNA-target binding.
LinkOut: [PMID: 23622248]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
ESCA 0.678 0.01 0.627 0.02 11 Click to see details
HNSC -0.269 0.04 -0.375 0.01 42 Click to see details
KICH -0.265 0.1 -0.237 0.13 25 Click to see details
UCEC -0.304 0.1 -0.256 0.15 19 Click to see details
PRAD -0.166 0.12 -0.195 0.09 50 Click to see details
LIHC -0.138 0.17 -0.051 0.36 49 Click to see details
LUAD 0.247 0.22 0.308 0.17 12 Click to see details
CESC -0.751 0.23 -0.500 0.33 3 Click to see details
PAAD -0.514 0.24 -0.200 0.4 4 Click to see details
CHOL -0.253 0.26 -0.133 0.37 9 Click to see details
BLCA -0.154 0.27 -0.238 0.17 18 Click to see details
LUSC -0.102 0.27 -0.206 0.11 38 Click to see details
COAD 0.217 0.3 0.190 0.33 8 Click to see details
THCA 0.038 0.39 -0.080 0.27 59 Click to see details
KIRP 0.047 0.4 0.071 0.35 32 Click to see details
BRCA 0.028 0.4 0.056 0.31 84 Click to see details
STAD 0.038 0.42 0.140 0.22 32 Click to see details
PCPG 0.198 0.44 0.500 0.33 3 Click to see details
KIRC 0.012 0.46 0.015 0.45 68 Click to see details
KIRC 0.012 0.46 0.015 0.45 68 Click to see details
KIRC 0.012 0.46 0.015 0.45 68 Click to see details
581 hsa-let-7e-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT002081 HMGA2 high mobility group AT-hook 2 5 5
MIRT003932 EIF3J eukaryotic translation initiation factor 3 subunit J 2 1
MIRT004469 SMC1A structural maintenance of chromosomes 1A 4 7
MIRT005718 WNT1 Wnt family member 1 4 1
MIRT006122 CCND1 cyclin D1 5 4
MIRT006404 MPL MPL proto-oncogene, thrombopoietin receptor 1 1
MIRT032098 RABGAP1L RAB GTPase activating protein 1 like 1 1
MIRT032099 DAD1 defender against cell death 1 1 1
MIRT032100 MYCN MYCN proto-oncogene, bHLH transcription factor 4 2
MIRT051413 WDR67 TBC1 domain family member 31 1 1
MIRT051414 FAM219B family with sequence similarity 219 member B 1 1
MIRT051415 C11orf91 chromosome 11 open reading frame 91 1 1
MIRT051416 CENPP centromere protein P 1 1
MIRT051417 TMEM107 transmembrane protein 107 1 1
MIRT051418 SREBF1 sterol regulatory element binding transcription factor 1 1 1
MIRT051419 DAAM1 dishevelled associated activator of morphogenesis 1 1 1
MIRT051420 DGCR8 DGCR8, microprocessor complex subunit 1 1
MIRT051421 RAP1A RAP1A, member of RAS oncogene family 1 1
MIRT051422 RPA1 replication protein A1 1 1
MIRT051423 SKIV2L Ski2 like RNA helicase 1 1
MIRT051424 AGO1 argonaute 1, RISC catalytic component 4 2
MIRT051425 RPS27 ribosomal protein S27 1 1
MIRT051426 ARNT2 aryl hydrocarbon receptor nuclear translocator 2 1 1
MIRT051427 GPM6B glycoprotein M6B 1 1
MIRT051428 TTLL12 tubulin tyrosine ligase like 12 1 1
MIRT051429 HIST2H2BF histone cluster 2 H2B family member f 1 1
MIRT051430 CELF2 CUGBP Elav-like family member 2 1 1
MIRT051431 AGO2 argonaute 2, RISC catalytic component 1 1
MIRT051432 VPS13D vacuolar protein sorting 13 homolog D 1 1
MIRT051433 RPL10 ribosomal protein L10 1 1
MIRT051434 SPCS2 signal peptidase complex subunit 2 1 1
MIRT051435 DCAF8 DDB1 and CUL4 associated factor 8 1 1
MIRT051436 CTC1 CST telomere replication complex component 1 1 1
MIRT051437 NAA60 N(alpha)-acetyltransferase 60, NatF catalytic subunit 1 1
MIRT051438 PHF3 PHD finger protein 3 1 1
MIRT051439 TUBA1B tubulin alpha 1b 1 1
MIRT051440 SHANK1 SH3 and multiple ankyrin repeat domains 1 1 1
MIRT051441 SKA2 spindle and kinetochore associated complex subunit 2 1 1
MIRT051442 SPTBN1 spectrin beta, non-erythrocytic 1 1 1
MIRT051443 ND2 MTND2 1 1
MIRT051444 MED13L mediator complex subunit 13 like 1 1
MIRT051445 RCOR3 REST corepressor 3 1 1
MIRT051446 MACF1 microtubule-actin crosslinking factor 1 1 1
MIRT051447 RDX radixin 2 5
MIRT051448 PCBP2 poly(rC) binding protein 2 1 1
MIRT051449 UBAP2L ubiquitin associated protein 2 like 1 1
MIRT051450 CDCA3 cell division cycle associated 3 1 1
MIRT051451 CABLES1 Cdk5 and Abl enzyme substrate 1 1 1
MIRT051452 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 1 1
MIRT051453 C12orf49 chromosome 12 open reading frame 49 1 1
MIRT051454 TIMP3 TIMP metallopeptidase inhibitor 3 1 1
MIRT051455 WBSCR16 RCC1 like 1 1
MIRT051456 SLC2A11 solute carrier family 2 member 11 1 1
MIRT051457 NF1 neurofibromin 1 1 1
MIRT051458 LRRC8A leucine rich repeat containing 8 VRAC subunit A 1 1
MIRT051459 RUNX1T1 RUNX1 translocation partner 1 1 1
MIRT051460 DTNB dystrobrevin beta 1 1
MIRT051461 SCMH1 Scm polycomb group protein homolog 1 1 1
MIRT051462 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT051463 RHBDD2 rhomboid domain containing 2 1 1
MIRT051464 ND5 NADH dehydrogenase, subunit 5 (complex I) 1 1
MIRT051465 NDST1 N-deacetylase and N-sulfotransferase 1 1 1
MIRT051466 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 5
MIRT051467 EIF4A1 eukaryotic translation initiation factor 4A1 1 1
MIRT051468 BAHCC1 BAH domain and coiled-coil containing 1 1 1
MIRT051469 CARM1 coactivator associated arginine methyltransferase 1 1 1
MIRT051470 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 1 1
MIRT051471 ND3 NADH dehydrogenase, subunit 3 (complex I) 1 1
MIRT051472 PIGS phosphatidylinositol glycan anchor biosynthesis class S 1 1
MIRT051473 ALG13 ALG13, UDP-N-acetylglucosaminyltransferase subunit 1 1
MIRT051474 RPN2 ribophorin II 1 1
MIRT051475 RPL12 ribosomal protein L12 1 1
MIRT051476 NME4 NME/NM23 nucleoside diphosphate kinase 4 1 1
MIRT051477 IVD isovaleryl-CoA dehydrogenase 1 1
MIRT051478 JAZF1 JAZF zinc finger 1 1 1
MIRT051479 ND4 NADH dehydrogenase, subunit 4 (complex I) 1 1
MIRT051480 VARS valyl-tRNA synthetase 1 1
MIRT051481 RNF26 ring finger protein 26 1 1
MIRT051482 LHFPL2 LHFPL tetraspan subfamily member 2 1 1
MIRT051483 ARCN1 archain 1 1 1
MIRT051484 COX1 cytochrome c oxidase subunit I 1 1
MIRT051485 SLC12A4 solute carrier family 12 member 4 1 1
MIRT051486 AEBP2 AE binding protein 2 1 1
MIRT051487 PET112 glutamyl-tRNA amidotransferase subunit B 1 1
MIRT051488 UROC1 urocanate hydratase 1 1 1
MIRT051489 IGF1R insulin like growth factor 1 receptor 5 10
MIRT051490 BSDC1 BSD domain containing 1 1 1
MIRT051491 PTK2 protein tyrosine kinase 2 1 1
MIRT051492 CDC5L cell division cycle 5 like 1 1
MIRT051493 EN2 engrailed homeobox 2 1 1
MIRT051494 SSB Sjogren syndrome antigen B 1 1
MIRT051495 SLCO3A1 solute carrier organic anion transporter family member 3A1 1 1
MIRT051496 RRAGC Ras related GTP binding C 1 1
MIRT051497 ZNF236 zinc finger protein 236 1 1
MIRT051498 SEMA4B semaphorin 4B 1 1
MIRT051499 SERBP1 SERPINE1 mRNA binding protein 1 1 1
MIRT051500 XIAP X-linked inhibitor of apoptosis 1 1
MIRT051501 GTF2I general transcription factor IIi 1 1
MIRT051502 JMJD1C jumonji domain containing 1C 1 1
MIRT051503 OTUD5 OTU deubiquitinase 5 1 1
MIRT051504 NOLC1 nucleolar and coiled-body phosphoprotein 1 1 1
MIRT051505 PPIG peptidylprolyl isomerase G 1 1
MIRT051506 PSMD2 proteasome 26S subunit, non-ATPase 2 1 1
MIRT051507 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 1 1
MIRT051508 VAMP2 vesicle associated membrane protein 2 1 1
MIRT051509 LSR lipolysis stimulated lipoprotein receptor 1 1
MIRT051510 KIAA0355 KIAA0355 1 1
MIRT051511 RPSA ribosomal protein SA 1 1
MIRT051512 DCAF6 DDB1 and CUL4 associated factor 6 1 1
MIRT051513 UHRF1BP1 UHRF1 binding protein 1 1 1
MIRT051514 OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 1 1
MIRT051515 PIGP phosphatidylinositol glycan anchor biosynthesis class P 1 1
MIRT051516 LMLN leishmanolysin like peptidase 1 1
MIRT051517 PPP2R1A protein phosphatase 2 scaffold subunit Aalpha 1 1
MIRT051518 HIPK1 homeodomain interacting protein kinase 1 1 1
MIRT051519 SERF2 small EDRK-rich factor 2 1 1
MIRT051520 RBM4 RNA binding motif protein 4 1 1
MIRT051521 RBM14 RNA binding motif protein 14 1 1
MIRT051522 HMGB1 high mobility group box 1 1 1
MIRT051523 GMPS guanine monophosphate synthase 1 1
MIRT051524 DIAPH1 diaphanous related formin 1 1 1
MIRT051525 STAM signal transducing adaptor molecule 1 1
MIRT051526 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 1 1
MIRT051527 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 1 1
MIRT051528 MARCH5 membrane associated ring-CH-type finger 5 1 1
MIRT051529 SQLE squalene epoxidase 1 1
MIRT051530 TIMM50 translocase of inner mitochondrial membrane 50 1 1
MIRT051531 NDUFA3 NADH:ubiquinone oxidoreductase subunit A3 1 1
MIRT051532 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 1 1
MIRT051533 NRSN2 neurensin 2 1 1
MIRT051534 SALL1 spalt like transcription factor 1 1 1
MIRT051535 COX3 cytochrome c oxidase III 1 1
MIRT051536 RABL6 RAB, member RAS oncogene family like 6 1 1
MIRT051537 SUPT4H1 SPT4 homolog, DSIF elongation factor subunit 1 1
MIRT051538 PACS2 phosphofurin acidic cluster sorting protein 2 1 1
MIRT051539 MTMR14 myotubularin related protein 14 1 1
MIRT051540 LUZP1 leucine zipper protein 1 1 1
MIRT051541 PFAS phosphoribosylformylglycinamidine synthase 1 1
MIRT051542 SUZ12 SUZ12 polycomb repressive complex 2 subunit 1 1
MIRT051543 PAPD4 poly(A) RNA polymerase D4, non-canonical 1 1
MIRT051544 QSOX1 quiescin sulfhydryl oxidase 1 1 1
MIRT051545 SPATA13 spermatogenesis associated 13 1 1
MIRT051546 DHX57 DExH-box helicase 57 1 1
MIRT051547 KATNB1 katanin regulatory subunit B1 1 1
MIRT051548 COL6A1 collagen type VI alpha 1 chain 1 1
MIRT051549 DHX15 DEAH-box helicase 15 1 1
MIRT051550 MTCH2 mitochondrial carrier 2 1 1
MIRT051551 KIAA0100 KIAA0100 1 1
MIRT051552 SUGP2 SURP and G-patch domain containing 2 1 1
MIRT051553 NCLN nicalin 1 1
MIRT051554 ATXN2L ataxin 2 like 1 1
MIRT051555 CHD9 chromodomain helicase DNA binding protein 9 1 1
MIRT051556 PES1 pescadillo ribosomal biogenesis factor 1 1 1
MIRT051557 NUP155 nucleoporin 155 2 7
MIRT051558 GNG5 G protein subunit gamma 5 2 3
MIRT051559 ARHGAP19 Rho GTPase activating protein 19 1 1
MIRT051560 MTFR1 mitochondrial fission regulator 1 1 1
MIRT051561 IRS2 insulin receptor substrate 2 2 1
MIRT051562 IRS4 insulin receptor substrate 4 1 1
MIRT051563 PPP1R10 protein phosphatase 1 regulatory subunit 10 1 1
MIRT051564 ZNF284 zinc finger protein 284 1 1
MIRT051565 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon 1 1
MIRT051566 SCD stearoyl-CoA desaturase 1 1
MIRT051567 FDPS farnesyl diphosphate synthase 1 1
MIRT051568 KRBOX4 KRAB box domain containing 4 1 1
MIRT051569 BRI3 brain protein I3 1 1
MIRT051570 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT051571 PYCR1 pyrroline-5-carboxylate reductase 1 1 1
MIRT051572 SMAP2 small ArfGAP2 1 1
MIRT051573 WDFY3 WD repeat and FYVE domain containing 3 1 1
MIRT051574 CRK CRK proto-oncogene, adaptor protein 1 1
MIRT051575 SRSF2 serine and arginine rich splicing factor 2 1 1
MIRT051576 PGD phosphogluconate dehydrogenase 1 1
MIRT051577 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT051578 ZNF652 zinc finger protein 652 1 1
MIRT051579 PSMA6 proteasome subunit alpha 6 1 1
MIRT051580 SLC38A2 solute carrier family 38 member 2 1 1
MIRT051581 LRRC41 leucine rich repeat containing 41 1 1
MIRT051582 RANBP2 RAN binding protein 2 1 1
MIRT051583 SVIL supervillin 1 1
MIRT051584 CCNG1 cyclin G1 1 1
MIRT051585 ZNF256 zinc finger protein 256 1 1
MIRT051586 COPG1 coatomer protein complex subunit gamma 1 1 1
MIRT051587 PDCD11 programmed cell death 11 1 1
MIRT051588 CNBP CCHC-type zinc finger nucleic acid binding protein 1 1
MIRT051589 USP37 ubiquitin specific peptidase 37 1 1
MIRT051590 UBE2V2 ubiquitin conjugating enzyme E2 V2 1 1
MIRT051591 UBE2H ubiquitin conjugating enzyme E2 H 1 1
MIRT051592 LMNA lamin A/C 1 1
MIRT051593 STAT3 signal transducer and activator of transcription 3 1 1
MIRT051594 TRPV1 transient receptor potential cation channel subfamily V member 1 1 1
MIRT051595 MATR3 matrin 3 1 1
MIRT051596 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 1 1
MIRT051597 HS6ST2 heparan sulfate 6-O-sulfotransferase 2 1 1
MIRT051598 WDR48 WD repeat domain 48 1 1
MIRT051599 RBM8A RNA binding motif protein 8A 1 1
MIRT051600 SCYL1 SCY1 like pseudokinase 1 1 1
MIRT051601 C19orf48 chromosome 19 open reading frame 48 1 1
MIRT051602 FOXD4L6 forkhead box D4 like 6 1 1
MIRT051603 PIGN phosphatidylinositol glycan anchor biosynthesis class N 1 1
MIRT051604 SPCS3 signal peptidase complex subunit 3 1 1
MIRT051605 TNFAIP1 TNF alpha induced protein 1 1 1
MIRT051606 MS4A10 membrane spanning 4-domains A10 1 1
MIRT051607 MSMO1 methylsterol monooxygenase 1 1 1
MIRT051608 ARID1A AT-rich interaction domain 1A 1 1
MIRT051609 NCKIPSD NCK interacting protein with SH3 domain 2 5
MIRT051610 NCBP1 nuclear cap binding protein subunit 1 1 1
MIRT051611 COX16 COX16, cytochrome c oxidase assembly homolog 1 1
MIRT051612 NUDT8 nudix hydrolase 8 1 1
MIRT051613 PHKA1 phosphorylase kinase regulatory subunit alpha 1 1 1
MIRT051614 TXNRD1 thioredoxin reductase 1 1 1
MIRT051615 ELMSAN1 ELM2 and Myb/SANT domain containing 1 1 1
MIRT051616 CTSA cathepsin A 1 1
MIRT051617 PRRC2A proline rich coiled-coil 2A 1 1
MIRT051618 SPAG9 sperm associated antigen 9 1 1
MIRT051619 AGMAT agmatinase 1 1
MIRT051620 NCKAP5L NCK associated protein 5 like 1 1
MIRT051621 ZFP62 ZFP62 zinc finger protein 1 1
MIRT051622 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 1 1
MIRT051623 POLR3D RNA polymerase III subunit D 2 3
MIRT051624 PRPF8 pre-mRNA processing factor 8 1 1
MIRT051625 ATP6 ATP synthase F0 subunit 6 1 1
MIRT051626 ZFAND5 zinc finger AN1-type containing 5 1 1
MIRT051627 BAZ1B bromodomain adjacent to zinc finger domain 1B 1 1
MIRT051628 KATNAL1 katanin catalytic subunit A1 like 1 1 1
MIRT051629 BMP2K BMP2 inducible kinase 1 1
MIRT051630 SPN sialophorin 1 1
MIRT051631 PA2G4 proliferation-associated 2G4 1 1
MIRT051632 RPRD2 regulation of nuclear pre-mRNA domain containing 2 1 1
MIRT051633 TUBB4B tubulin beta 4B class IVb 1 1
MIRT051634 TRRAP transformation/transcription domain associated protein 1 1
MIRT051635 SLCO4A1 solute carrier organic anion transporter family member 4A1 1 1
MIRT051636 CCRN4L nocturnin 1 1
MIRT051637 USE1 unconventional SNARE in the ER 1 1 1
MIRT051638 STARD7 StAR related lipid transfer domain containing 7 1 1
MIRT051639 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 3
MIRT051640 CLTC clathrin heavy chain 1 1
MIRT051641 TERF1 telomeric repeat binding factor 1 1 1
MIRT051642 PAX3 paired box 3 1 1
MIRT051643 CCDC97 coiled-coil domain containing 97 1 1
MIRT051644 HLA-C major histocompatibility complex, class I, C 1 1
MIRT051645 GTPBP8 GTP binding protein 8 (putative) 1 1
MIRT051646 VGLL4 vestigial like family member 4 1 1
MIRT051647 ANKRD40 ankyrin repeat domain 40 1 1
MIRT051648 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 1 1
MIRT051649 ND1 NADH dehydrogenase, subunit 1 (complex I) 1 1
MIRT051650 DSP desmoplakin 1 1
MIRT051651 UBN2 ubinuclein 2 1 1
MIRT051652 ZNF805 zinc finger protein 805 1 1
MIRT051653 RBBP4 RB binding protein 4, chromatin remodeling factor 1 1
MIRT051654 OCLN occludin 1 1
MIRT051655 CBX5 chromobox 5 2 3
MIRT051656 AMPD2 adenosine monophosphate deaminase 2 1 1
MIRT051657 MKI67 marker of proliferation Ki-67 1 1
MIRT051658 SUB1 SUB1 homolog, transcriptional regulator 1 1
MIRT051659 RSL1D1 ribosomal L1 domain containing 1 1 1
MIRT051660 SEC23IP SEC23 interacting protein 1 1
MIRT051661 RNMT RNA guanine-7 methyltransferase 1 1
MIRT051662 SGSM3 small G protein signaling modulator 3 1 1
MIRT051663 ZFP3 ZFP3 zinc finger protein 1 1
MIRT051664 GLUL glutamate-ammonia ligase 1 1
MIRT051665 POLD1 DNA polymerase delta 1, catalytic subunit 1 1
MIRT051666 WDR4 WD repeat domain 4 1 1
MIRT051667 PPP1R2 protein phosphatase 1 regulatory inhibitor subunit 2 1 1
MIRT051668 RAI2 retinoic acid induced 2 1 1
MIRT051669 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 1 1
MIRT051670 UTP15 UTP15, small subunit processome component 1 1
MIRT051671 THADA THADA, armadillo repeat containing 1 1
MIRT051672 ZNF451 zinc finger protein 451 1 1
MIRT051673 CREBBP CREB binding protein 1 1
MIRT051674 ZNF770 zinc finger protein 770 1 1
MIRT051675 CLDN4 claudin 4 1 1
MIRT051676 ZKSCAN7 zinc finger with KRAB and SCAN domains 7 1 1
MIRT051677 NICN1 nicolin 1 1 1
MIRT051678 RPLP2 ribosomal protein lateral stalk subunit P2 1 1
MIRT051679 DCBLD2 discoidin, CUB and LCCL domain containing 2 1 1
MIRT051680 IRGQ immunity related GTPase Q 1 1
MIRT051681 CA5B carbonic anhydrase 5B 1 1
MIRT051682 COX14 COX14, cytochrome c oxidase assembly factor 1 1
MIRT051683 PSD3 pleckstrin and Sec7 domain containing 3 1 1
MIRT051684 RPL27A ribosomal protein L27a 1 1
MIRT051685 CWC15 CWC15 spliceosome associated protein homolog 1 1
MIRT051686 NT5DC2 5'-nucleotidase domain containing 2 1 1
MIRT051687 OR7D2 olfactory receptor family 7 subfamily D member 2 1 1
MIRT051688 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 1 1
MIRT051689 NUDT15 nudix hydrolase 15 1 1
MIRT051690 CDH18 cadherin 18 1 1
MIRT051691 FAM160B1 family with sequence similarity 160 member B1 1 1
MIRT051692 DZIP1 DAZ interacting zinc finger protein 1 1 1
MIRT051693 TDRD7 tudor domain containing 7 1 1
MIRT051694 TCF4 transcription factor 4 1 1
MIRT051695 ENSA endosulfine alpha 1 1
MIRT051696 GTF3C1 general transcription factor IIIC subunit 1 1 1
MIRT051697 TNFRSF1A TNF receptor superfamily member 1A 1 1
MIRT051698 CCDC113 coiled-coil domain containing 113 1 1
MIRT051699 MYO9B myosin IXB 1 1
MIRT051700 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 1 1
MIRT051701 PRAMEF13 PRAME family member 13 1 1
MIRT051702 PMPCA peptidase, mitochondrial processing alpha subunit 2 5
MIRT051703 MRPS2 mitochondrial ribosomal protein S2 1 1
MIRT051704 RACGAP1 Rac GTPase activating protein 1 1 1
MIRT051705 CCDC106 coiled-coil domain containing 106 1 1
MIRT051706 CYP2B6 cytochrome P450 family 2 subfamily B member 6 1 1
MIRT051707 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 3
MIRT051708 PSME4 proteasome activator subunit 4 1 1
MIRT051709 SETD1A SET domain containing 1A 1 1
MIRT054561 MMP9 matrix metallopeptidase 9 3 1
MIRT054579 IGF1 insulin like growth factor 1 3 1
MIRT063195 ADIPOR2 adiponectin receptor 2 2 2
MIRT065687 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT067399 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 2
MIRT068154 TXLNA taxilin alpha 2 2
MIRT068528 NHLRC3 NHL repeat containing 3 2 6
MIRT068789 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT073006 ARID3B AT-rich interaction domain 3B 2 6
MIRT076223 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT077616 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT080398 ONECUT2 one cut homeobox 2 2 2
MIRT083300 ZCCHC3 zinc finger CCHC-type containing 3 2 2
MIRT084976 BACH1 BTB domain and CNC homolog 1 2 2
MIRT094160 PCGF3 polycomb group ring finger 3 2 6
MIRT094460 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT095766 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT100094 ABT1 activator of basal transcription 1 2 8
MIRT112242 MDM4 MDM4, p53 regulator 2 4
MIRT118586 STK4 serine/threonine kinase 4 2 2
MIRT120921 PDE12 phosphodiesterase 12 2 8
MIRT123317 CALU calumenin 2 2
MIRT152272 TNFSF9 TNF superfamily member 9 2 2
MIRT153847 NCOA3 nuclear receptor coactivator 3 2 2
MIRT168583 HMGA1 high mobility group AT-hook 1 2 4
MIRT180603 CRY2 cryptochrome circadian clock 2 2 2
MIRT187717 SUOX sulfite oxidase 2 2
MIRT191404 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT193101 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT215720 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT218815 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT240330 UBXN2B UBX domain protein 2B 2 2
MIRT243473 TRIM71 tripartite motif containing 71 2 2
MIRT244069 EDN1 endothelin 1 2 2
MIRT252330 SALL3 spalt like transcription factor 3 2 2
MIRT255314 CDV3 CDV3 homolog 2 2
MIRT259277 PGRMC1 progesterone receptor membrane component 1 2 2
MIRT259479 TXLNG taxilin gamma 2 2
MIRT260707 CLDN12 claudin 12 2 6
MIRT264693 C11ORF57 chromosome 11 open reading frame 57 2 4
MIRT266212 PEX11B peroxisomal biogenesis factor 11 beta 2 2
MIRT266626 CHTOP chromatin target of PRMT1 2 2
MIRT268839 C1ORF21 chromosome 1 open reading frame 21 2 2
MIRT294446 ZNF264 zinc finger protein 264 2 2
MIRT297013 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT297443 SLC20A1 solute carrier family 20 member 1 2 4
MIRT300037 BZW1 basic leucine zipper and W2 domains 1 2 4
MIRT300893 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT303320 MXD1 MAX dimerization protein 1 2 2
MIRT309846 NAT8L N-acetyltransferase 8 like 2 2
MIRT322428 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT324731 ACER2 alkaline ceramidase 2 2 2
MIRT402057 ATP6V1F ATPase H+ transporting V1 subunit F 2 4
MIRT437395 LIN28A lin-28 homolog A 4 1
MIRT437396 AURKB aurora kinase B 4 1
MIRT437435 EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 2 1
MIRT438632 TNFRSF10B TNF receptor superfamily member 10b 2 1
MIRT439135 MYC MYC proto-oncogene, bHLH transcription factor 0 1
MIRT442020 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT445658 ATP6V1G1 ATPase H+ transporting V1 subunit G1 2 6
MIRT447136 KIF27 kinesin family member 27 2 2
MIRT448259 ZNF774 zinc finger protein 774 2 2
MIRT449005 ANKRD46 ankyrin repeat domain 46 2 2
MIRT449953 FMNL3 formin like 3 2 2
MIRT451155 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451624 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451693 C1RL complement C1r subcomponent like 2 2
MIRT452092 NUCB2 nucleobindin 2 2 2
MIRT452431 QDPR quinoid dihydropteridine reductase 2 2
MIRT452943 DISC1 disrupted in schizophrenia 1 2 2
MIRT453401 RHD Rh blood group D antigen 2 6
MIRT454164 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT454280 FXN frataxin 2 2
MIRT454539 RABL2A RAB, member of RAS oncogene family like 2A 2 2
MIRT454854 ACOT9 acyl-CoA thioesterase 9 2 4
MIRT455676 GLO1 glyoxalase I 2 2
MIRT457248 RABL2B RAB, member of RAS oncogene family like 2B 2 2
MIRT457677 ZNF587 zinc finger protein 587 2 2
MIRT457887 THEM6 thioesterase superfamily member 6 2 4
MIRT458016 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458279 FUT10 fucosyltransferase 10 2 2
MIRT459736 RRM1 ribonucleotide reductase catalytic subunit M1 2 2
MIRT460453 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460500 FAM105A family with sequence similarity 105 member A 2 6
MIRT460938 NOA1 nitric oxide associated 1 2 4
MIRT461092 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461169 SLC11A2 solute carrier family 11 member 2 2 4
MIRT461364 COL8A1 collagen type VIII alpha 1 chain 2 2
MIRT462382 YAE1D1 Yae1 domain containing 1 2 2
MIRT462780 ZNF8 zinc finger protein 8 2 2
MIRT463420 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463662 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT464265 VCL vinculin 2 2
MIRT465122 TSC22D2 TSC22 domain family member 2 2 4
MIRT466184 TMED5 transmembrane p24 trafficking protein 5 2 4
MIRT466722 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT469102 RNF144B ring finger protein 144B 2 2
MIRT469714 RAB40C RAB40C, member RAS oncogene family 2 2
MIRT470425 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT470679 POLR2D RNA polymerase II subunit D 2 4
MIRT470861 PLXND1 plexin D1 2 2
MIRT471271 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471957 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472672 NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit 2 2
MIRT472739 MTUS1 microtubule associated scaffold protein 1 2 6
MIRT473134 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT473234 SMCR7L mitochondrial elongation factor 1 1 4
MIRT473828 MAP2K7 mitogen-activated protein kinase kinase 7 2 2
MIRT473940 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT474022 LRRC20 leucine rich repeat containing 20 2 2
MIRT474502 KLHDC8B kelch domain containing 8B 2 2
MIRT474766 KIAA0930 KIAA0930 2 2
MIRT474905 KCTD21 potassium channel tetramerization domain containing 21 2 2
MIRT475331 IFNLR1 interferon lambda receptor 1 2 2
MIRT475379 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT475733 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT476548 GABPB1 GA binding protein transcription factor beta subunit 1 2 4
MIRT476973 FAM83G family with sequence similarity 83 member G 2 4
MIRT477534 EIF4G2 eukaryotic translation initiation factor 4 gamma 2 2 4
MIRT477682 EFHD2 EF-hand domain family member D2 2 2
MIRT481201 ATXN7L3B ataxin 7 like 3B 2 4
MIRT481241 ATXN7L3 ataxin 7 like 3 2 2
MIRT481363 ATG9A autophagy related 9A 2 2
MIRT481388 ATG12 autophagy related 12 2 2
MIRT481652 AREL1 apoptosis resistant E3 ubiquitin protein ligase 1 2 2
MIRT481851 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT482184 AHR aryl hydrocarbon receptor 2 2
MIRT482220 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT485296 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT486659 ZNF28 zinc finger protein 28 2 2
MIRT489413 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491867 ZBTB5 zinc finger and BTB domain containing 5 2 8
MIRT492216 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492626 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT493323 LIMD2 LIM domain containing 2 2 2
MIRT493901 FAM43A family with sequence similarity 43 member A 2 4
MIRT494263 CEP120 centrosomal protein 120 2 2
MIRT494687 ARID3A AT-rich interaction domain 3A 2 2
MIRT495968 TBC1D19 TBC1 domain family member 19 2 2
MIRT496111 SNX17 sorting nexin 17 2 2
MIRT497875 SLC12A7 solute carrier family 12 member 7 2 2
MIRT498122 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT499405 PLCG2 phospholipase C gamma 2 2 4
MIRT499493 GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 2 2
MIRT499653 SDR42E1 short chain dehydrogenase/reductase family 42E, member 1 2 2
MIRT499942 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT499997 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT500819 THBS1 thrombospondin 1 2 3
MIRT500902 STRN striatin 2 4
MIRT501118 SLC5A6 solute carrier family 5 member 6 2 4
MIRT501173 SLC10A7 solute carrier family 10 member 7 2 6
MIRT501202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT501241 SEMA4C semaphorin 4C 2 6
MIRT501328 RNFT1 ring finger protein, transmembrane 1 2 2
MIRT501355 RNF44 ring finger protein 44 2 4
MIRT501387 RBFOX2 RNA binding protein, fox-1 homolog 2 2 10
MIRT501441 RAB11FIP4 RAB11 family interacting protein 4 2 2
MIRT501759 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501943 MBD2 methyl-CpG binding domain protein 2 2 8
MIRT502106 KPNA5 karyopherin subunit alpha 5 2 8
MIRT502130 KMT2D lysine methyltransferase 2D 2 4
MIRT502784 CEP135 centrosomal protein 135 2 2
MIRT502845 CELF1 CUGBP Elav-like family member 1 2 2
MIRT504789 C12orf4 chromosome 12 open reading frame 4 2 2
MIRT505017 ZNF644 zinc finger protein 644 2 2
MIRT506942 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT507252 FIGN fidgetin, microtubule severing factor 2 8
MIRT507694 COIL coilin 2 6
MIRT508401 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508665 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT508932 AK4 adenylate kinase 4 2 4
MIRT510395 ZNF566 zinc finger protein 566 2 6
MIRT510518 YOD1 YOD1 deubiquitinase 2 6
MIRT511386 IKZF3 IKAROS family zinc finger 3 2 4
MIRT512745 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT515954 C9orf156 tRNA methyltransferase O 2 2
MIRT516083 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT523619 FZD9 frizzled class receptor 9 2 4
MIRT523733 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523990 DVL3 dishevelled segment polarity protein 3 2 2
MIRT524113 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT525727 SOD2 superoxide dismutase 2 2 2
MIRT527763 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT529727 OPRL1 opioid related nociceptin receptor 1 2 2
MIRT533187 WASL Wiskott-Aldrich syndrome like 2 6
MIRT536378 LEFTY1 left-right determination factor 1 2 2
MIRT543785 RBM12B RNA binding motif protein 12B 2 4
MIRT543868 SLC16A9 solute carrier family 16 member 9 2 2
MIRT545387 PM20D2 peptidase M20 domain containing 2 2 2
MIRT545890 ZNF200 zinc finger protein 200 2 4
MIRT546334 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT547373 MSI2 musashi RNA binding protein 2 2 2
MIRT547579 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548264 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT548351 EPHA4 EPH receptor A4 2 2
MIRT548534 DUSP1 dual specificity phosphatase 1 2 2
MIRT548560 DNAL1 dynein axonemal light chain 1 2 2
MIRT548779 COLEC12 collectin subfamily member 12 2 2
MIRT548978 CCNT2 cyclin T2 2 2
MIRT549208 BEND4 BEN domain containing 4 2 4
MIRT549763 ZNF611 zinc finger protein 611 2 6
MIRT549799 KIAA0391 KIAA0391 2 2
MIRT549847 ECHDC1 ethylmalonyl-CoA decarboxylase 1 2 2
MIRT550898 ACTA1 actin, alpha 1, skeletal muscle 2 2
MIRT551283 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551318 GSG2 histone H3 associated protein kinase 2 6
MIRT551932 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552003 RAD18 RAD18, E3 ubiquitin protein ligase 2 2
MIRT552410 ZNF460 zinc finger protein 460 2 4
MIRT553013 USP38 ubiquitin specific peptidase 38 2 2
MIRT555550 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT555711 PDZD8 PDZ domain containing 8 2 2
MIRT557372 HAND1 heart and neural crest derivatives expressed 1 2 2
MIRT557960 FAM222B family with sequence similarity 222 member B 2 2
MIRT559087 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559497 ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 2 2
MIRT561772 PEG10 paternally expressed 10 2 2
MIRT564402 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT565443 SURF4 surfeit 4 2 2
MIRT566518 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT567715 E2F6 E2F transcription factor 6 2 2
MIRT568655 ABHD17C abhydrolase domain containing 17C 2 2
MIRT569498 THYN1 thymocyte nuclear protein 1 2 2
MIRT573820 TGOLN2 trans-golgi network protein 2 2 2
MIRT574363 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT574750 GOLGA4 golgin A4 2 2
MIRT574788 FAM104A family with sequence similarity 104 member A 2 2
MIRT576089 Poteg POTE ankyrin domain family, member G 2 2
MIRT576812 Thbs1 thrombospondin 1 2 3
MIRT616370 RWDD1 RWD domain containing 1 2 2
MIRT617851 FMO4 flavin containing monooxygenase 4 2 2
MIRT642394 ZNF556 zinc finger protein 556 2 2
MIRT680519 PRIM2 DNA primase subunit 2 2 2
MIRT680547 ZNF584 zinc finger protein 584 2 2
MIRT680800 ZNF578 zinc finger protein 578 2 2
MIRT680838 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT681141 INTS7 integrator complex subunit 7 2 2
MIRT681271 RFC2 replication factor C subunit 2 2 2
MIRT681323 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT681359 BRI3BP BRI3 binding protein 2 2
MIRT681506 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681536 ZNF738 zinc finger protein 738 2 2
MIRT681658 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT681738 RAB19 RAB19, member RAS oncogene family 2 4
MIRT681797 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681869 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT681941 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682102 ITGA3 integrin subunit alpha 3 2 4
MIRT682181 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682238 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682384 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682444 MTX3 metaxin 3 2 2
MIRT682604 CPA4 carboxypeptidase A4 2 2
MIRT682640 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT689327 FPR1 formyl peptide receptor 1 2 2
MIRT689730 ATXN2 ataxin 2 2 2
MIRT691036 ZNF799 zinc finger protein 799 2 2
MIRT691935 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT694884 ZNF417 zinc finger protein 417 2 2
MIRT695255 ZNF443 zinc finger protein 443 2 2
MIRT695413 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT700589 PRSS22 protease, serine 22 2 2
MIRT701428 NHLRC2 NHL repeat containing 2 2 2
MIRT702484 KIAA1328 KIAA1328 2 2
MIRT702715 IPO9 importin 9 2 2
MIRT704028 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT704418 CTPS1 CTP synthase 1 2 2
MIRT705750 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT712373 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT713520 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT731263 FASLG Fas ligand 3 1
MIRT732697 Ccr7 chemokine (C-C motif) receptor 7 2 0
MIRT732700 Snhg12 small nucleolar RNA host gene 12 2 0
MIRT734626 SYT7 synaptotagmin 7 1 0
MIRT755829 UBQLN4 ubiquilin 4 3 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
let-7e Docosahexaenoic acid NULL 445580 Quantitative real-time PCR Caco-2 cells 24623846 2014 up-regulated
let-7e Hydroxamic acid HDACi LAQ824 NULL NULL Microarray breast cancer cell line SKBr3 16452179 2006 down-regulated
let-7e Doxorubicin approved 31703 Microarray ovarian cancer 19237188 2009 up-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
let-7e Etoposide approved 36462 Microarray Normal human fibroblasts (AG01522) 19633716 2009 up-regulated
let-7e Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
let-7e 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 down-regulated
let-7e Bicalutamide approved 2375 Microarray prostate 22674191 2012 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 up-regulated
let-7e Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 down-regulated
let-7e 17beta-estradiol (E2) approved 5757 Microarray rat breast 17700064 2007 down-regulated
let-7e Marine fungal metabolite 1386A NULL NULL Microarray MCF-7 breast cancer cells. 22159329 2012 down-regulated
let-7e Ginsenoside Rh2 NULL 119307 Microarray NSCLC cell line A549 23152132 2013 down-regulated
let-7e 5-aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAR) NULL 16078949 Microarray hepatocytes 23107762 2013 up-regulated
let-7e Isoproterenol approved 3779 Quantitative real-time PCR heart 22847192 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Doxorubicin 31703 NSC123127 approved resistant High Ovarian Cancer cell line (OV19, TOV21G, TOV112D, FUOV1, C13, OV2008, A2780CP, A2780S, IGROV1, T8, OVCAR5, IMCC3, A2008, OVCAR3, SKOV3, IOSER)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Verapamil 2520 NSC272366 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Tongue Squamous Cell Carcinoma cell line (Tca8113)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant High Colon Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer tissue and cell line (A2780)
hsa-let-7e Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (HT-29)
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-let-7e Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (H1155, H358, H1993)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Vincristine 5978 approved sensitive Low Gastric Cancer cell line (SGC7901)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive High Lung Adenocarcinoma cell line (A549)
hsa-let-7e Imatinib 5291 NSC743414 approved resistant High Gastrointestinal Stromal Tumor tissue
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Esophageal Adenocarcinoma cell line (OE19)
hsa-let-7e Doxorubicin 31703 NSC123127 approved sensitive Low Breast Cancer tissue and cell line (MCF-7)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-let-7e Plx-4720 24180719 NSC757438 resistant High Thyroid Cancer cell line (8505c, BCPAP)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive High Colorectal Cancer cell line (DLD-1)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive Low Ovarian Cancer cell line (A2780, HO8910, ES2, CAOV3, SKOV3)
hsa-let-7e Fluorouracil 3385 NSC19893 approved sensitive Low Colorectal Cancer cell line (HCT-8)
hsa-let-7e Daunorubicin 30323 NSC82151 approved resistant High Acute Promyelocytic Leukemia cell line (HL60)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7C)
hsa-let-7e Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Non-Small Cell Lung Cancer cell line (PC-9)
hsa-let-7e Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375)
hsa-let-7e Gefitinib 123631 NSC715055 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Regorafenib 11167602 NSC763932 approved sensitive Low Colorectal Cancer cell line (HCT-116)
hsa-let-7e Ribavirin+Pegylated IFNa-2b resistant tissue (chronic hepatitis C)
hsa-let-7e Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-let-7e 4-Hydroxytamoxifen+Tamoxifen resistant cell line (LY2)
hsa-let-7e Ethanol+Tamoxifen resistant cell line (LY2)
hsa-let-7e Methotrexate 126941 NSC740 approved resistant cell line (HT29)
hsa-let-7e Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-let-7e Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-let-7e Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-let-7e Gemcitabine 60750 NSC613327 approved resistant cell line (HuH28)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (KYSE)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-let-7e Platinum 23939 resistant tissue (non-small cell lung cancer)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-let-7e Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)
hsa-let-7e Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)
hsa-let-7e-5p Alvocidib 5287969 NSC649890 resistant
hsa-let-7e-5p Ethyl, methoxy, prodigisine 135829283 NSC742418 resistant
hsa-let-7e-5p Platinum 23939 resistant Low Ovarian Cancer tissue
hsa-let-7e-5p Paclitaxel 36314 NSC125973 approved sensitive High Non-Small Cell Lung Cancer cell line (A549)
hsa-let-7e-5p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (AsPC-1)
hsa-let-7e-5p Platinum 23939 resistant High High-Grade Serous Ovarian Cancer tissue
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-let-7e-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-let-7e-5p Prednisone/Azathioprine/Methotrexate/Cyclophosphamide/Mycophenolate mofetil sensitive tissue (myasthenia gravis)
hsa-let-7e-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-let-7e-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-let-7e-5p Sunitinib 5329102 NSC750690 approved sensitive tissue (clear cell renal cell carcinoma)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved resistant cell line (MGC-803)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-let-7e-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-let-7e-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-let-7e-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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