Gene Symbol |
PTPN2
|
Synonyms |
PTN2, PTPT, TC-PTP, TCELLPTP, TCPTP |
Description |
protein tyrosine phosphatase, non-receptor type 2 |
Transcript |
NM_002828
|
Other Transcripts |
NM_080422
,
NM_080423
|
Expression |
|
Putative miRNA Targets on PTPN2 |
|
3'UTR of PTPN2 (miRNA target sites are highlighted) |
>PTPN2|NM_002828|3'UTR
1 ACAATTAATTTTGCCCAGCAAGCTTCTGCACTAGTAACTGACAGTGCTACATTAATCATAGGGGTTTGTCTGCAGCAAAC
81 GCCTCATATCCCAAAAACGGTGCAGTAGAATAGACATCAACCAGATAAGTGATATTTACAGTCACAAGCCCAACATCTCA
161 GGACTCTTGACTGCAGGTTCCTCTGAACCCCAAACTGTAAATGGCTGTCTAAAATAAAGACATTCATGTTTGTTAAAAAC
241 TGGTAAATTTTGCAACTGTATTCATACATGTCAAACACAGTATTTCACCTGACCAACATTGAGATATCCTTTATCACAGG
321 ATTTGTTTTTGGAGGCTATCTGGATTTTAACCTGCACTTGATATAAGCAATAAATATTGTGGTTTTATCTACGTTATTGG
401 AAAGAAAATGACATTTAAATAATGTGTGTAATGTATAATGTACTATTGACATGGGCATCAACACTTTTATTCTTAAGCAT
481 TTCAGGGTAAATATATTTTATAAGTATCTATTTAATCTTTTGTAGTTAACTGTACTTTTTAAGAGCTCAATTTGAAAAAT
561 CTGTTACTAAAAAAATAAATTGTATGTCGATTGAATTGTACTGGATACATTTTCCATTTTTCTAAAGAGAAGTTTGATAT
641 GAGCAGTTAGAAGTTGGAATAAGCAATTTCTACTATATATTGCATTTCTTTTATGTTTTACAGTTTTCCCCATTTTAAAA
721 AGAAAAGCAAACAAAGAAACAAAAGTTTTTCCTAAAAATATCTTTGAAGGAAAATTCTCCTTACTGGGATAGTCAGGTAA
801 ACAGTTGGTCAAGACTTTGTAAAGAAATTGGTTTCTGTAAATCCCATTATTGATATGTTTATTTTTCATGAAAATTTCAA
881 TGTAGTTGGGGTAGATTATGATTTAGGAAGCAAAAGTAAGAAGCAGCATTTTATGATTCATAATTTCAGTTTACTAGACT
961 GAAGTTTTGAAGTAAACACTTTTCAGTTTCTTTCTACTTCAATAAATAGTATGATTATATGCAAACCTTACATTGTCATT
1041 TTAACTTAATGAATATTTTTTAAAGCAAACTGTTTAATGAATTTAACTGCTCATTTGAATGCTAGCTTTCCTCAGATTTC
1121 AACATTCCATTCAGTGTTTAATTTGTCTTACTTAAACTTGAAATTGTTGTTACAAATTTAATTGCTAGGAGGCATGGATA
1201 GCATACATTATTATGGATAGCATACCTTATTTCAGTGGTTTTCAAACTATGCTCATTGGATGTCCAGGTGGGTCAAGAGG
1281 TTACTTTCAACCACAGCATCTCTGCCTTGTCTCTTTATATGCCACATAAGATTTCTGCATAAGGCTTAAGTATTTTAAAG
1361 GGGGCAGTTATCATTTAAAAACAGTTTGGTCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAAGT
1441 GGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACGTGGTGAAACACCATCTCTACTAAAAATGCAAAAA
1521 TTAGCTGGGCATGGTGGAGGGCACCTGTAATCTCAGCTACTCAGGAGGCTGAGGTAGGAGAATTGCTTGAACCCAGGAGA
1601 TGGAGGTTGCAGTGAGCTGAGATCACGTCACTGCACTCCAGCCAGGGCGACAGAGCGAGACTCCATCTCAAAAGAAACAA
1681 ACAAAAAAAACAGTTTGGGCCGGGTGTGGTGGCTCACGCTTGTAATCCCAGCACTTCGGAAGGCCAAGGCGGGCGGATCA
1761 CGAGGTCAAGAGATGGAGACTGTCCTGGCCAACATGGTGAAATCCCTTCTTTACTAAAAATACAAAAATTATCTGGGCGT
1841 GGTGGTGCATGCCTGTAGTCCCAGCTCCTTGGGAGGCTAAGGCAGGAGAATCACTTGAACCCGGGAGGCAGAGGTTGCAG
1921 TGAGCCGAGATTGCACCACTGCACTCCAGCCTGGCAACAGAGCAAGACTTCGTCTC
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' aguCGGCGACAGUGUGC-GUGUc 5'
|:| || |:|:|:| ||||
Target 5' cttGTCTCT-TTATATGCCACAt 3'
|
1306 - 1327
|
114.00 |
-10.30 |
2
|
miRNA 3' agUCGGCGACAGU---GUGCGUGUc 5'
||: |:| ||| :|:|| ||
Target 5' tcAGTGGTTTTCAAACTATGCTCAt 3'
|
1232 - 1256
|
112.00 |
-13.10 |
3
|
miRNA 3' agUCGGC---GACAGU-GUG-CGUGuc 5'
||||| :|| || ||| ||||
Target 5' tgAGCCGAGATTG-CACCACTGCACtc 3'
|
1921 - 1946
|
111.00 |
-16.70 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|