miRTarBase - #MIRT058369


—
pre-miRNA Information
pre-miRNA hsa-mir-3123   
Genomic Coordinates chr1: 241132272 - 241132346
Description Homo sapiens miR-3123 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3123
Sequence 49| CAGAGAAUUGUUUAAUC |65
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 4 1 + 241132323 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1453759221 1 dbSNP
rs968575171 5 dbSNP
rs979407933 9 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TBCEL   
Synonyms El, LRRC35
Description tubulin folding cofactor E like
Transcript NM_001130047   
Other Transcripts NM_152715   
Expression
Putative miRNA Targets on TBCEL
3'UTR of TBCEL
(miRNA target sites are highlighted)		 
>TBCEL|NM_001130047|3'UTR
   1 CCTCTACCAGCCTTGTGAAAAACATACACATAAGGACTTGTTGCAGGGCATTTGTTTTTAATGTGGTTTTCTTTAGGAGG
  81 GAGAGGTTGTTTTTGTTTTGTTTTGTTCTGTTTAGGTTTGGGAAGGATTTTGTATATTTTTCCCCCTGGAGTGAGTAGGG
 161 GCCATTTTTGGGTGTTTTCTACCACAGATTGATTTGGCTCAGCCAGCGGAATTGGCCACATTTCCAGTGTATGTGCCCTC
 241 TCTAAGGAAAGATGACAAAGAAATCACCGACTTCTTACTGTGTTCACTGGGATTTGCCTGCCACTTGGTTATCATTACTG
 321 TTGGGTGAACCTGTGAAGATAACATGAACACTGTAGCCCCTTAGAAGGGTCTCATAGAGAATTTAAACAGGGTGACAAGG
 401 AATCTTCACAGGAAGGGCCAGAACTTCTCTCTCCCAGTTCTTCCTTCCGCTACCCTCCCTCCTTGGCTTTTTTGGTTCAG
 481 TTCCATTTTTTTTTCATTTTGACATGTGGTTTACCTAATAGTTTTGTTCTGTTCATAATTCTTATTTCTCAACCTGGGTG
 561 ATTTTTTTGTTCTCATTTCTCCCTTTTGAAATAATTGAAAGTGTTTTAAGCATTTTTAACCTGATTCTAATCTCAGGTAC
 641 GCAGTAAGAAGCTATAACTCTGTTAGAACCTCGAAGAGTAGATGTAGAATGAAAACTCCAGGAAAACTTGCAGTTATTCT
 721 GGAAGCACCGGCAGAACAGTCTGATCTCTTTGTATGTTACTAACTCACTTTTAATGTCCCTGTACATTATGTCAGCCATT
 801 ACTTTCATAACATGAAATATGTCAGATTCCAGAGTTCTTTTATTTTTGCTTATTGAATGTATTTCCTCATATCTTTCTTT
 881 TTCATTACTTTAAACTATTGGGAATTGAGGCCTGACTTCATAAATAATTCAATAGAGTCCTGGATACGTGCACCAGGAGA
 961 GTTGAGAATTAGCTCATAAACTATCTGTGGTGTGTGTGGGGAATGAAGTTGGGGGATGTGGGGGAAGAGCTTATGACTTT
1041 CCCACCTGTGTCATCCATTGGAAGCCCTTGCTCTTGCACTTTGCATTAAAAGTGGGAAACATTAATCAAAGGGAGATTTT
1121 ATTCCCAGGTTTTCCCTGGGACTTTGTGATATCATAATTGAACAGTTCTTTTGTTTTACATTTCAATTTAGTTGCCTCAT
1201 AGAAGTATAACTGCCCAATCTATGAGTAAAGTGTAAGTGTCAAAACTTTACAATTGCCTCCAAGTCATATTTTTTGCAGA
1281 AGCACATTTAAAGCACTTTTCTGTAAAAGCTAGTTCCTTACCTGCTTGGAAATCTTTTTGTTTGTTCTTCTATTCCTTTG
1361 TTAATCAGATGTAATCCCTTTCTTTAATGTGTATTTTTCTTGGTCCACCATGTTTACAGATGGGAGACTTGAGAGATACT
1441 TAGCATAACTGGGGCAGAAAGTGTGTAAGTGAAGTATTTTTCAAAGAATGCAGTTATTATCTGATTGCATTTGACCTTTT
1521 GACCTTTGTTACATAATTCTACCCCTCCTACAAATTTAATTTTTTTATGAAATTTTTAGGTGACTTGTAAATTCTTCATG
1601 TATGAGGAGTTGTGTTTATTAATGCTACTTTTTAAATTTTCCTGTGCCATGTGGCAGATGTTTATTCTCTTAATGCACTT
1681 CAGGTTTGCTATCTGTAAAGCCTTTGACCCAGGCCTACTGAGTCAAATCTACATTCAGTGTAACATTAAAGGTGGAAACC
1761 AAAGGGTTTGAGAAAGACGAATAAGGCCTATTCTCCTTCTGCTGCAGACTTTATCTTTCAAAATCATAAAAATGAGCAAT
1841 GGAGATCCAGGCTGGGTATAGACAAGAATAATTATTTTGCAAACACATTTTCCTGACAGATTTTTGGAAGTAGGAAAAAA
1921 GTATGGCAACAGTGTCATGAAGATTGAAACTGTAGGTGCTTTGTGTATGTATGCATGAGTGCAGATGAGTTTGAGAGAGA
2001 AAAAGTGTAATTGAGCCCTTTGCTTTTGTCAGCCTGGGAAACAGATGCGTTCTTATTTTTTGAAGTTGTGTGACCCTGGA
2081 CTGTCCCACAGCAGAAGGCAGAACAAACACTTATGTTATGCTTTAATCATAAGTGGAATGGTCACAATTAATAAGATATT
2161 TTATATATGGCAAAGTTTTATGAAATGCTTTTTTACTATTAGAGACCTGTTTCTTCTGTTATTACAGAACACAGTGTTTA
2241 TCAACTGCGGACATAATTCTTTTATTATACAGTTGCATGTAAAGGGAGCTTCTCATTTAATTCAGCGGATGTGGGTATTT
2321 TTAGGGCATTGTAATTGATGGTTTTAATAATTGCTGAATAATTTTTGATTAAGAGAAAAATGTAATACAATTACTGGTCT
2401 GAGTTACAGAACAGAAGTTAATGAAAAAGGCTATTTGAGCATGTGTACTTATAGATTCATTTGGGTGGCTGAGAAAAGAT
2481 GCTGCTTTTGAAATAAAATTGGTGCTGTGTAGACACTTGTAACCAAAATTATTTTTATAACAGAACTAAAAAAAAAAAAA
2561 A
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cuaaUUUGU---UAAGAGAc 5'
              |:|::   ||||||| 
Target 5' tggcAGATGTTTATTCTCTt 3'
 1652 - 1671 141.00 -6.40
2 
miRNA  3' cuAAUUUGUUAAGAGAc 5'
            ||:||||:||||:| 
Target 5' aaTTGAACAGTTCTTTt 3'
 1156 - 1172 139.00 -13.20
3 
miRNA  3' cuaaUUUGUUAAGAGAc 5'
              | |:||||||:| 
Target 5' gcggACATAATTCTTTt 3'
 2247 - 2263 137.00 -5.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26998024 10 COSMIC
COSN30737537 23 COSMIC
COSN30493612 29 COSMIC
COSN30139424 35 COSMIC
COSN17182220 65 COSMIC
COSN22596540 115 COSMIC
COSN30128021 126 COSMIC
COSN1516387 291 COSMIC
COSN8214725 294 COSMIC
COSN1516388 312 COSMIC
COSN1127808 324 COSMIC
COSN1127809 422 COSMIC
COSN29283304 604 COSMIC
COSN18723377 764 COSMIC
COSN5897009 899 COSMIC
COSN8214726 1022 COSMIC
COSN20092437 1153 COSMIC
COSN29597719 1267 COSMIC
COSN27964066 1355 COSMIC
COSN28834649 1780 COSMIC
COSN1516389 1876 COSMIC
COSN8734823 1978 COSMIC
COSN6988961 2154 COSMIC
COSN14838311 2336 COSMIC
COSN5897011 2930 COSMIC
COSN20879365 2931 COSMIC
COSN2469320 2984 COSMIC
COSN30007323 3476 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs771113907 1 dbSNP
rs779117852 2 dbSNP
rs777203553 4 dbSNP
rs1201186179 5 dbSNP
rs745927020 7 dbSNP
rs1256110895 8 dbSNP
rs768655080 10 dbSNP
rs573542962 13 dbSNP
rs776365664 16 dbSNP
rs1450154982 17 dbSNP
rs1198212351 18 dbSNP
rs761732292 20 dbSNP
rs769666023 23 dbSNP
rs1216903616 24 dbSNP
rs1169083856 26 dbSNP
rs773121410 28 dbSNP
rs762733420 29 dbSNP
rs765942291 31 dbSNP
rs1398153636 32 dbSNP
rs1384770040 33 dbSNP
rs758912526 35 dbSNP
rs1345548875 41 dbSNP
rs768070185 44 dbSNP
rs753158839 45 dbSNP
rs1027763213 49 dbSNP
rs949895070 59 dbSNP
rs1340078956 63 dbSNP
rs1045575304 65 dbSNP
rs1269385759 69 dbSNP
rs952216406 71 dbSNP
rs1327967833 72 dbSNP
rs527566258 75 dbSNP
rs11602226 80 dbSNP
rs1017534926 93 dbSNP
rs993229769 99 dbSNP
rs1048708120 100 dbSNP
rs1463762855 106 dbSNP
rs976605066 106 dbSNP
rs887452730 122 dbSNP
rs1476624782 123 dbSNP
rs1236079448 125 dbSNP
rs935217613 135 dbSNP
rs1462135073 137 dbSNP
rs564424595 141 dbSNP
rs1245079418 142 dbSNP
rs1196757581 146 dbSNP
rs988360833 152 dbSNP
rs1317537025 161 dbSNP
rs759384161 185 dbSNP
rs1216546954 206 dbSNP
rs549537978 207 dbSNP
rs767704806 208 dbSNP
rs1007788662 209 dbSNP
rs1282190278 212 dbSNP
rs765298308 236 dbSNP
rs1451853947 237 dbSNP
rs1383385943 241 dbSNP
rs1338137962 247 dbSNP
rs773183510 251 dbSNP
rs1443860818 254 dbSNP
rs946430362 256 dbSNP
rs1170786843 258 dbSNP
rs966168946 259 dbSNP
rs1044767424 261 dbSNP
rs1414257078 263 dbSNP
rs776275032 269 dbSNP
rs1245452309 270 dbSNP
rs997679215 292 dbSNP
rs1056767239 293 dbSNP
rs1266662990 297 dbSNP
rs1431228399 298 dbSNP
rs1450036324 303 dbSNP
rs1200747208 304 dbSNP
rs1395254823 324 dbSNP
rs1438727535 328 dbSNP
rs898055225 340 dbSNP
rs1381601123 344 dbSNP
rs993711677 348 dbSNP
rs763192171 357 dbSNP
rs752822671 359 dbSNP
rs979954881 360 dbSNP
rs867224920 372 dbSNP
rs1347689482 374 dbSNP
rs1385395954 376 dbSNP
rs1007560414 380 dbSNP
rs751854768 392 dbSNP
rs1157425973 400 dbSNP
rs1418982729 407 dbSNP
rs1239657820 408 dbSNP
rs112522932 419 dbSNP
rs991386716 424 dbSNP
rs1239946647 428 dbSNP
rs997470643 433 dbSNP
rs1264724186 434 dbSNP
rs1223485150 436 dbSNP
rs1490471063 439 dbSNP
rs576201015 443 dbSNP
rs531368968 449 dbSNP
rs1253359282 450 dbSNP
rs187013426 453 dbSNP
rs1045520385 457 dbSNP
rs988005627 465 dbSNP
rs919118062 468 dbSNP
rs192223056 469 dbSNP
rs1282318623 476 dbSNP
rs1176381020 484 dbSNP
rs374037889 485 dbSNP
rs527612271 485 dbSNP
rs376175003 486 dbSNP
rs78898111 486 dbSNP
rs547404474 500 dbSNP
rs1161390576 504 dbSNP
rs1049305332 505 dbSNP
rs1428677426 506 dbSNP
rs1200465068 508 dbSNP
rs1368352115 514 dbSNP
rs1456868021 522 dbSNP
rs887413784 529 dbSNP
rs1270806199 530 dbSNP
rs1007647320 532 dbSNP
rs1395647538 535 dbSNP
rs1038733698 536 dbSNP
rs35880364 541 dbSNP
rs1217863305 545 dbSNP
rs1309976983 550 dbSNP
rs1329561094 562 dbSNP
rs1223773144 572 dbSNP
rs1346963862 584 dbSNP
rs926351129 592 dbSNP
rs1381949587 595 dbSNP
rs1363074769 598 dbSNP
rs902094059 606 dbSNP
rs1464956509 607 dbSNP
rs1405498944 624 dbSNP
rs1177177037 626 dbSNP
rs1471095252 641 dbSNP
rs537238359 642 dbSNP
rs1391984385 645 dbSNP
rs1021121447 655 dbSNP
rs1320037784 656 dbSNP
rs1235033582 658 dbSNP
rs1273796848 661 dbSNP
rs565710145 669 dbSNP
rs1196532690 670 dbSNP
rs539442473 673 dbSNP
rs1234197003 674 dbSNP
rs1480768164 679 dbSNP
rs902697753 680 dbSNP
rs745402184 689 dbSNP
rs1249316374 698 dbSNP
rs1049233710 699 dbSNP
rs35274310 703 dbSNP
rs1308486248 712 dbSNP
rs368819132 713 dbSNP
rs1190682627 727 dbSNP
rs959517447 730 dbSNP
rs757967893 731 dbSNP
rs1337471970 734 dbSNP
rs1454705256 743 dbSNP
rs779553315 746 dbSNP
rs1039135288 747 dbSNP
rs1465373667 749 dbSNP
rs570339329 752 dbSNP
rs981335672 755 dbSNP
rs1442709367 762 dbSNP
rs1169006283 766 dbSNP
rs901915510 768 dbSNP
rs1462656643 772 dbSNP
rs1184115355 775 dbSNP
rs537202996 777 dbSNP
rs746720009 778 dbSNP
rs1462316965 781 dbSNP
rs929135910 783 dbSNP
rs1302534201 787 dbSNP
rs1377044548 788 dbSNP
rs1416770449 789 dbSNP
rs1480724686 793 dbSNP
rs1253477254 796 dbSNP
rs997499877 806 dbSNP
rs984525222 820 dbSNP
rs1293758803 825 dbSNP
rs1316439492 850 dbSNP
rs1248771193 852 dbSNP
rs908950211 859 dbSNP
rs943175045 866 dbSNP
rs1340990564 870 dbSNP
rs1038701835 874 dbSNP
rs1328210179 878 dbSNP
rs1339774325 878 dbSNP
rs182842834 881 dbSNP
rs151150784 897 dbSNP
rs1422577026 903 dbSNP
rs1364727662 924 dbSNP
rs541161176 933 dbSNP
rs1446348306 934 dbSNP
rs555619557 936 dbSNP
rs188225607 942 dbSNP
rs769140557 948 dbSNP
rs556167465 949 dbSNP
rs895203112 957 dbSNP
rs1490301136 960 dbSNP
rs1292935752 966 dbSNP
rs1307900621 979 dbSNP
rs1022136317 982 dbSNP
rs577927621 984 dbSNP
rs193272452 986 dbSNP
rs1024902462 988 dbSNP
rs1279038727 995 dbSNP
rs7109612 997 dbSNP
rs980596413 999 dbSNP
rs1281687852 1000 dbSNP
rs1210988871 1009 dbSNP
rs770231218 1016 dbSNP
rs926390357 1020 dbSNP
rs981286566 1022 dbSNP
rs564183617 1034 dbSNP
rs991857463 1035 dbSNP
rs1026197737 1045 dbSNP
rs773805801 1046 dbSNP
rs1422065868 1051 dbSNP
rs918879343 1054 dbSNP
rs1157494168 1058 dbSNP
rs1453918346 1061 dbSNP
rs1429539603 1064 dbSNP
rs1364999889 1085 dbSNP
rs1175620501 1089 dbSNP
rs1479880613 1099 dbSNP
rs1270091064 1108 dbSNP
rs950697434 1113 dbSNP
rs1445789130 1114 dbSNP
rs1284251716 1116 dbSNP
rs1206233597 1118 dbSNP
rs185388669 1126 dbSNP
rs909073198 1134 dbSNP
rs943101785 1141 dbSNP
rs1223157316 1142 dbSNP
rs369691016 1153 dbSNP
rs1383292637 1158 dbSNP
rs1283686157 1164 dbSNP
rs1313583184 1175 dbSNP
rs922910170 1192 dbSNP
rs1359780005 1204 dbSNP
rs1317606640 1215 dbSNP
rs1039163652 1229 dbSNP
rs901946586 1233 dbSNP
rs1063101 1234 dbSNP
rs1042107685 1244 dbSNP
rs1429485003 1252 dbSNP
rs924183740 1254 dbSNP
rs1218500266 1256 dbSNP
rs891756747 1257 dbSNP
rs111981178 1258 dbSNP
rs1054349337 1261 dbSNP
rs561901981 1267 dbSNP
rs1022672448 1270 dbSNP
rs1284643091 1278 dbSNP
rs1487048393 1288 dbSNP
rs764023767 1301 dbSNP
rs903760511 1306 dbSNP
rs1012262285 1310 dbSNP
rs1214253575 1333 dbSNP
rs1241393150 1345 dbSNP
rs1046465919 1353 dbSNP
rs906510597 1355 dbSNP
rs140115272 1364 dbSNP
rs1393449127 1370 dbSNP
rs1455770874 1372 dbSNP
rs1213019790 1378 dbSNP
rs538622005 1393 dbSNP
rs1174540783 1394 dbSNP
rs1379745247 1410 dbSNP
rs1025639601 1420 dbSNP
rs11218139 1421 dbSNP
rs1006168898 1422 dbSNP
rs565784103 1437 dbSNP
rs1016484465 1438 dbSNP
rs1334138825 1440 dbSNP
rs964595408 1444 dbSNP
rs974454134 1445 dbSNP
rs950476672 1454 dbSNP
rs923006609 1462 dbSNP
rs909496471 1466 dbSNP
rs1419276901 1468 dbSNP
rs1435424465 1470 dbSNP
rs759758190 1472 dbSNP
rs977732840 1475 dbSNP
rs1383863896 1477 dbSNP
rs763817990 1478 dbSNP
rs936890105 1484 dbSNP
rs1234539249 1487 dbSNP
rs1054060452 1488 dbSNP
rs1350853704 1489 dbSNP
rs1245025271 1493 dbSNP
rs1202724275 1494 dbSNP
rs974897865 1510 dbSNP
rs1272034855 1516 dbSNP
rs1214883134 1517 dbSNP
rs1286885430 1527 dbSNP
rs923399798 1532 dbSNP
rs916695384 1534 dbSNP
rs1053645974 1542 dbSNP
rs891874939 1546 dbSNP
rs1439610657 1550 dbSNP
rs1353493731 1551 dbSNP
rs1329981223 1560 dbSNP
rs948232946 1567 dbSNP
rs753655669 1568 dbSNP
rs189501439 1570 dbSNP
rs532753512 1585 dbSNP
rs1194491462 1588 dbSNP
rs1445716836 1592 dbSNP
rs1416093305 1599 dbSNP
rs1175488804 1601 dbSNP
rs1237877131 1605 dbSNP
rs1468609704 1607 dbSNP
rs1160388305 1610 dbSNP
rs1002082143 1631 dbSNP
rs541095131 1632 dbSNP
rs1408567040 1644 dbSNP
rs896357295 1654 dbSNP
rs1206887437 1655 dbSNP
rs17124764 1659 dbSNP
rs1221682437 1665 dbSNP
rs1360012313 1668 dbSNP
rs1291404926 1677 dbSNP
rs1047495923 1678 dbSNP
rs1371964588 1680 dbSNP
rs1396387393 1683 dbSNP
rs1279838678 1684 dbSNP
rs1411238601 1702 dbSNP
rs1344051246 1712 dbSNP
rs1302884762 1715 dbSNP
rs950485379 1728 dbSNP
rs1006311788 1730 dbSNP
rs1441449272 1738 dbSNP
rs1330185961 1739 dbSNP
rs1408772005 1746 dbSNP
rs1015856832 1748 dbSNP
rs964931744 1756 dbSNP
rs1266543522 1764 dbSNP
rs1198331151 1771 dbSNP
rs974929023 1773 dbSNP
rs114126817 1779 dbSNP
rs765056324 1780 dbSNP
rs1016186285 1782 dbSNP
rs111781066 1791 dbSNP
rs567547410 1795 dbSNP
rs1284318605 1796 dbSNP
rs988974519 1800 dbSNP
rs750426369 1806 dbSNP
rs1228231215 1807 dbSNP
rs1030192029 1814 dbSNP
rs1370181588 1815 dbSNP
rs1287675735 1820 dbSNP
rs1430619780 1820 dbSNP
rs112596169 1827 dbSNP
rs913321293 1828 dbSNP
rs1468432304 1829 dbSNP
rs377402403 1832 dbSNP
rs1177400184 1837 dbSNP
rs1433625758 1840 dbSNP
rs1043081364 1841 dbSNP
rs1184759137 1848 dbSNP
rs927245156 1850 dbSNP
rs937319326 1856 dbSNP
rs757836424 1857 dbSNP
rs923579955 1861 dbSNP
rs137987759 1876 dbSNP
rs1184036151 1886 dbSNP
rs1262196747 1887 dbSNP
rs1233499231 1894 dbSNP
rs1314362200 1901 dbSNP
rs147288817 1901 dbSNP
rs1214531095 1903 dbSNP
rs990103725 1908 dbSNP
rs35834454 1915 dbSNP
rs1185701908 1924 dbSNP
rs1419941666 1927 dbSNP
rs1405434064 1932 dbSNP
rs779684476 1935 dbSNP
rs1461715351 1940 dbSNP
rs1467753652 1944 dbSNP
rs1169722504 1947 dbSNP
rs916832038 1954 dbSNP
rs1427864585 1959 dbSNP
rs1390773681 1964 dbSNP
rs1190427651 1970 dbSNP
rs1459624647 1972 dbSNP
rs1241968918 1984 dbSNP
rs578055139 1985 dbSNP
rs1249977352 1989 dbSNP
rs1204191266 1990 dbSNP
rs2298491 1996 dbSNP
rs1300531405 2006 dbSNP
rs754694599 2008 dbSNP
rs1329187204 2023 dbSNP
rs557368079 2030 dbSNP
rs1244381849 2035 dbSNP
rs1315759725 2037 dbSNP
rs886204523 2037 dbSNP
rs1398011929 2042 dbSNP
rs574425230 2043 dbSNP
rs1297810014 2046 dbSNP
rs1461353865 2048 dbSNP
rs1339353386 2049 dbSNP
rs1412458419 2050 dbSNP
rs1291905691 2054 dbSNP
rs1170468384 2076 dbSNP
rs1005885564 2078 dbSNP
rs576244296 2082 dbSNP
rs1187554099 2090 dbSNP
rs1015887862 2100 dbSNP
rs1357933818 2104 dbSNP
rs928166053 2105 dbSNP
rs1248045391 2115 dbSNP
rs1176258298 2118 dbSNP
rs868781148 2119 dbSNP
rs964379910 2129 dbSNP
rs995795834 2130 dbSNP
rs930036135 2134 dbSNP
rs1170649907 2141 dbSNP
rs1270016406 2142 dbSNP
rs1337908171 2153 dbSNP
rs191396363 2154 dbSNP
rs1030563157 2164 dbSNP
rs1197718473 2169 dbSNP
rs1334052042 2176 dbSNP
rs1306611309 2185 dbSNP
rs1410646462 2186 dbSNP
rs1273983507 2189 dbSNP
rs1047162918 2199 dbSNP
rs1309580622 2219 dbSNP
rs954969586 2220 dbSNP
rs989404540 2231 dbSNP
rs1208897246 2235 dbSNP
rs888408043 2238 dbSNP
rs913360992 2249 dbSNP
rs75050717 2250 dbSNP
rs529064486 2255 dbSNP
rs978875919 2257 dbSNP
rs927361443 2274 dbSNP
rs1040147066 2280 dbSNP
rs1472685199 2283 dbSNP
rs1254456182 2297 dbSNP
rs900399641 2298 dbSNP
rs996121536 2307 dbSNP
rs1475518369 2308 dbSNP
rs1212121624 2310 dbSNP
rs1348697768 2318 dbSNP
rs1260172631 2319 dbSNP
rs1229280113 2327 dbSNP
rs1192895937 2331 dbSNP
rs541237407 2335 dbSNP
rs1476278129 2338 dbSNP
rs1289993941 2342 dbSNP
rs370560199 2345 dbSNP
rs529243274 2345 dbSNP
rs1330291641 2354 dbSNP
rs184340231 2355 dbSNP
rs1432309427 2357 dbSNP
rs1382169593 2363 dbSNP
rs1314223910 2365 dbSNP
rs890311405 2368 dbSNP
rs1413796752 2374 dbSNP
rs1173811323 2382 dbSNP
rs111848290 2383 dbSNP
rs1030757262 2385 dbSNP
rs1295523158 2389 dbSNP
rs1201679563 2398 dbSNP
rs958062179 2409 dbSNP
rs1261137939 2430 dbSNP
rs1209378132 2437 dbSNP
rs989159904 2442 dbSNP
rs1466295923 2446 dbSNP
rs764363061 2451 dbSNP
rs188593117 2453 dbSNP
rs1023745890 2457 dbSNP
rs1223097579 2459 dbSNP
rs1344098307 2463 dbSNP
rs537156608 2472 dbSNP
rs886237968 2474 dbSNP
rs780494718 2480 dbSNP
rs1005999752 2486 dbSNP
rs1232144099 2498 dbSNP
rs367758300 2500 dbSNP
rs1435271647 2506 dbSNP
rs1282516561 2508 dbSNP
rs1334341118 2510 dbSNP
rs1413507702 2520 dbSNP
rs1403400057 2530 dbSNP
rs542799093 2533 dbSNP
rs1474722733 2535 dbSNP
rs1215733983 2549 dbSNP
rs747702460 2550 dbSNP
rs867865763 2564 dbSNP
rs1259579143 2569 dbSNP
rs1451448681 2575 dbSNP
rs1241327349 2588 dbSNP
rs1203297928 2593 dbSNP
rs144820489 2601 dbSNP
rs1029975673 2602 dbSNP
rs778126004 2607 dbSNP
rs1337200682 2609 dbSNP
rs1296838720 2610 dbSNP
rs749870740 2626 dbSNP
rs1366768629 2640 dbSNP
rs983239765 2647 dbSNP
rs1312236182 2659 dbSNP
rs1446847841 2659 dbSNP
rs1359323491 2671 dbSNP
rs1376692503 2672 dbSNP
rs890706830 2674 dbSNP
rs909964164 2688 dbSNP
rs941464074 2693 dbSNP
rs1452226228 2699 dbSNP
rs1010454188 2724 dbSNP
rs1039692481 2725 dbSNP
rs899843922 2727 dbSNP
rs1182989054 2738 dbSNP
rs1473255677 2738 dbSNP
rs1020948341 2741 dbSNP
rs1395105734 2742 dbSNP
rs1179886421 2747 dbSNP
rs968955753 2751 dbSNP
rs1273591314 2753 dbSNP
rs561660619 2772 dbSNP
rs1205826556 2774 dbSNP
rs1344148971 2785 dbSNP
rs1288978574 2791 dbSNP
rs1227303213 2792 dbSNP
rs931863099 2811 dbSNP
rs1285632924 2825 dbSNP
rs770848485 2827 dbSNP
rs1350275796 2828 dbSNP
rs769497068 2829 dbSNP
rs890258919 2830 dbSNP
rs1364189159 2834 dbSNP
rs1164674033 2835 dbSNP
rs138657533 2840 dbSNP
rs1416024995 2841 dbSNP
rs1031292684 2845 dbSNP
rs371438198 2855 dbSNP
rs893538455 2862 dbSNP
rs774427119 2867 dbSNP
rs374734519 2872 dbSNP
rs1319439963 2879 dbSNP
rs759705380 2882 dbSNP
rs1370761265 2884 dbSNP
rs1483908269 2889 dbSNP
rs1266772745 2898 dbSNP
rs1220695419 2905 dbSNP
rs958751044 2910 dbSNP
rs1291338239 2911 dbSNP
rs1221744805 2916 dbSNP
rs181709069 2917 dbSNP
rs1289387965 2920 dbSNP
rs1412128914 2929 dbSNP
rs917216552 2932 dbSNP
rs56232713 2933 dbSNP
rs1437752063 2938 dbSNP
rs1351720071 2943 dbSNP
rs534846428 2944 dbSNP
rs951753314 2945 dbSNP
rs1258879651 2946 dbSNP
rs1161648372 2955 dbSNP
rs1473471462 2961 dbSNP
rs1422769089 2964 dbSNP
rs1190569763 2975 dbSNP
rs867869764 2978 dbSNP
rs1247951722 2980 dbSNP
rs546792290 2984 dbSNP
rs571643658 3000 dbSNP
rs962795478 3002 dbSNP
rs975920826 3004 dbSNP
rs1037483696 3006 dbSNP
rs1300974023 3008 dbSNP
rs77152723 3009 dbSNP
rs1370290706 3021 dbSNP
rs1268924734 3027 dbSNP
rs12282529 3028 dbSNP
rs931694331 3029 dbSNP
rs557059367 3031 dbSNP
rs541941717 3035 dbSNP
rs879328172 3036 dbSNP
rs1357241159 3038 dbSNP
rs1010314850 3044 dbSNP
rs1427256323 3046 dbSNP
rs1186589752 3059 dbSNP
rs911810999 3066 dbSNP
rs1248051249 3068 dbSNP
rs532912135 3071 dbSNP
rs1020560877 3073 dbSNP
rs1482033500 3075 dbSNP
rs935269466 3080 dbSNP
rs1052262563 3086 dbSNP
rs1255787481 3087 dbSNP
rs187052618 3093 dbSNP
rs1345379483 3103 dbSNP
rs1314308406 3113 dbSNP
rs555661171 3122 dbSNP
rs1000380213 3129 dbSNP
rs1010634121 3133 dbSNP
rs1362536489 3134 dbSNP
rs1034494914 3136 dbSNP
rs1450724539 3144 dbSNP
rs1159677414 3145 dbSNP
rs541004109 3146 dbSNP
rs1044798626 3147 dbSNP
rs573987955 3148 dbSNP
rs1003156154 3149 dbSNP
rs1466419103 3150 dbSNP
rs141880715 3154 dbSNP
rs1428982649 3155 dbSNP
rs559538775 3158 dbSNP
rs1421532565 3164 dbSNP
rs1255129606 3171 dbSNP
rs1390867529 3176 dbSNP
rs1305007653 3180 dbSNP
rs577648566 3195 dbSNP
rs1272866316 3196 dbSNP
rs111406527 3204 dbSNP
rs189802386 3209 dbSNP
rs530387424 3214 dbSNP
rs548575746 3216 dbSNP
rs1321193121 3226 dbSNP
rs1313752841 3227 dbSNP
rs963206094 3228 dbSNP
rs1381111623 3229 dbSNP
rs975460908 3233 dbSNP
rs921340800 3236 dbSNP
rs1409149939 3240 dbSNP
rs1272482939 3242 dbSNP
rs1332413609 3248 dbSNP
rs973228494 3261 dbSNP
rs1170411750 3263 dbSNP
rs561196677 3269 dbSNP
rs569954216 3271 dbSNP
rs1367360524 3281 dbSNP
rs528805053 3284 dbSNP
rs924635881 3293 dbSNP
rs546865384 3294 dbSNP
rs1425141130 3301 dbSNP
rs1480130968 3317 dbSNP
rs931808785 3325 dbSNP
rs1483577828 3326 dbSNP
rs1254675787 3329 dbSNP
rs1051561329 3333 dbSNP
rs1175152700 3334 dbSNP
rs890185714 3342 dbSNP
rs1247267155 3349 dbSNP
rs182425755 3350 dbSNP
rs1183449710 3356 dbSNP
rs754571734 3365 dbSNP
rs1041749562 3374 dbSNP
rs538885272 3386 dbSNP
rs1389421510 3397 dbSNP
rs1293530883 3406 dbSNP
rs1459130795 3407 dbSNP
rs1409381419 3408 dbSNP
rs1157950674 3415 dbSNP
rs1414621671 3417 dbSNP
rs148050590 3417 dbSNP
rs1197411962 3419 dbSNP
rs1451472488 3431 dbSNP
rs569383257 3432 dbSNP
rs1211773985 3433 dbSNP
rs1167611187 3439 dbSNP
rs1395452913 3443 dbSNP
rs1267789518 3444 dbSNP
rs1296456364 3445 dbSNP
rs904950878 3449 dbSNP
rs1003274157 3450 dbSNP
rs894678217 3454 dbSNP
rs374315901 3457 dbSNP
rs1301875686 3459 dbSNP
rs1014833164 3465 dbSNP
rs1385767572 3468 dbSNP
rs1056026186 3475 dbSNP
rs1296687928 3483 dbSNP
rs1457397550 3498 dbSNP
rs187149005 3501 dbSNP
rs886791630 3502 dbSNP
rs1477898343 3505 dbSNP
rs141418600 3509 dbSNP
rs951533165 3510 dbSNP
rs1447789495 3511 dbSNP
rs1247444677 3522 dbSNP
rs555513725 3527 dbSNP
rs1466366752 3533 dbSNP
rs1353541728 3534 dbSNP
rs573975107 3542 dbSNP
rs1198573203 3543 dbSNP
rs1344023980 3548 dbSNP
rs1293641044 3555 dbSNP
rs1306730308 3558 dbSNP
rs189891898 3562 dbSNP
rs1016865845 3565 dbSNP
rs963273600 3565 dbSNP
rs1201936594 3566 dbSNP
rs1331788270 3569 dbSNP
rs1414301824 3570 dbSNP
rs1252706643 3572 dbSNP
rs752449160 3577 dbSNP
rs1209599278 3578 dbSNP
rs997014357 3578 dbSNP
rs113380057 3579 dbSNP
rs1389631844 3584 dbSNP
rs1028520734 3587 dbSNP
rs955430261 3589 dbSNP
rs1451390963 3605 dbSNP
rs986896441 3608 dbSNP
rs1031648637 3609 dbSNP
rs34529283 3613 dbSNP
rs921849997 3616 dbSNP
rs953262470 3618 dbSNP
rs1256532988 3622 dbSNP
rs987699916 3623 dbSNP
rs1339905910 3631 dbSNP
rs1340823543 3632 dbSNP
rs759296256 3632 dbSNP
rs911661386 3632 dbSNP
rs1474534934 3635 dbSNP
rs945764064 3637 dbSNP
rs1041387964 3638 dbSNP
rs767251287 3643 dbSNP
rs1190732730 3644 dbSNP
rs1341481650 3644 dbSNP
rs552870099 3647 dbSNP
rs1414910152 3653 dbSNP
rs35152140 3653 dbSNP
rs988044531 3653 dbSNP
rs1247957591 3654 dbSNP
rs1370540515 3661 dbSNP
rs1428302069 3672 dbSNP
rs1168515002 3673 dbSNP
rs111303201 3681 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 219899.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cuaauuuguUAAGAGAc 5'
                   ||||||| 
Target 5' ------uuuAUUCUCUu 3'
 		1 - 11
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 219899.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cuaauuuguUAAGAGAc 5'
                   ||||||| 
Target 5' ------uuuAUUCUCUu 3'
 		1 - 11
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001130047 | 3UTR | CUUAAUGCACUUCAGGUUUGCUAUCUGUAAAGCCUUUGACCCAGGCCUACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000422003.2 | 3UTR | UUUAUUCUCUUAAUGCACUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000422003.2 | 3UTR | UUUAUUCUCUUAAUGCACUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
113 hsa-miR-3123 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058369 TBCEL tubulin folding cofactor E like 2 4
MIRT059816 EFNA1 ephrin A1 2 2
MIRT066850 TMEM19 transmembrane protein 19 2 2
MIRT071503 CALM1 calmodulin 1 2 6
MIRT073758 NUBP1 nucleotide binding protein 1 2 2
MIRT074324 TNRC6A trinucleotide repeat containing 6A 2 10
MIRT094805 LMNB1 lamin B1 2 2
MIRT099173 MAP3K4 mitogen-activated protein kinase kinase kinase 4 2 2
MIRT099545 ID4 inhibitor of DNA binding 4, HLH protein 2 2
MIRT122643 E2F3 E2F transcription factor 3 2 2
MIRT180918 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 8
MIRT192844 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT224984 BAG4 BCL2 associated athanogene 4 2 2
MIRT246065 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT357085 PRRC1 proline rich coiled-coil 1 2 2
MIRT378170 C5ORF51 chromosome 5 open reading frame 51 2 2
MIRT441636 KDM5A lysine demethylase 5A 2 2
MIRT441802 BCAS1 breast carcinoma amplified sequence 1 2 2
MIRT443019 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443445 SERPINB4 serpin family B member 4 2 2
MIRT443661 SERPINB3 serpin family B member 3 2 2
MIRT443776 STS steroid sulfatase 2 2
MIRT444663 TSPAN14 tetraspanin 14 2 2
MIRT444924 KIAA1522 KIAA1522 2 2
MIRT445378 FOXO1 forkhead box O1 2 2
MIRT447920 PAIP2B poly(A) binding protein interacting protein 2B 2 2
MIRT449202 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT449713 TSPYL1 TSPY like 1 2 2
MIRT450403 TMEM47 transmembrane protein 47 2 2
MIRT450787 PAPOLG poly(A) polymerase gamma 2 2
MIRT451381 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT452507 WDR1 WD repeat domain 1 2 2
MIRT453264 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT454642 FAM83H family with sequence similarity 83 member H 2 2
MIRT455513 C6orf106 chromosome 6 open reading frame 106 2 2
MIRT456709 LDB1 LIM domain binding 1 2 2
MIRT457231 AP3D1 adaptor related protein complex 3 delta 1 subunit 2 2
MIRT459235 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT460553 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT461424 CTSL2 cathepsin V 2 3
MIRT462869 CYP51A1 cytochrome P450 family 51 subfamily A member 1 2 2
MIRT467178 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT469233 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT474125 LIPC lipase C, hepatic type 2 2
MIRT475509 HSP90B1 heat shock protein 90 beta family member 1 2 4
MIRT478134 DHX36 DEAH-box helicase 36 2 2
MIRT481326 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 2 2
MIRT482003 AMOTL2 angiomotin like 2 2 2
MIRT482230 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT483436 RHOXF2B Rhox homeobox family member 2B 2 2
MIRT483824 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT492051 TNFSF9 TNF superfamily member 9 2 2
MIRT494114 DLX6 distal-less homeobox 6 2 2
MIRT498882 ZNF12 zinc finger protein 12 2 10
MIRT499674 NPHP3 nephrocystin 3 2 2
MIRT506932 IGDCC4 immunoglobulin superfamily DCC subclass member 4 2 6
MIRT509461 ZNF587 zinc finger protein 587 2 6
MIRT510048 AKR1B10 aldo-keto reductase family 1 member B10 2 4
MIRT514807 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT515217 CRCP CGRP receptor component 2 2
MIRT515486 INCENP inner centromere protein 2 4
MIRT517765 ZNF366 zinc finger protein 366 2 4
MIRT518216 TRMT10B tRNA methyltransferase 10B 2 2
MIRT519602 ZNF805 zinc finger protein 805 2 2
MIRT523570 GGCX gamma-glutamyl carboxylase 2 4
MIRT525795 SOD2 superoxide dismutase 2 2 2
MIRT533055 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT534218 SLC37A3 solute carrier family 37 member 3 2 4
MIRT535633 NR2E1 nuclear receptor subfamily 2 group E member 1 2 2
MIRT535863 MRPL17 mitochondrial ribosomal protein L17 2 2
MIRT536344 LEFTY1 left-right determination factor 1 2 2
MIRT537923 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT543114 SKA2 spindle and kinetochore associated complex subunit 2 2 2
MIRT544717 ZNF529 zinc finger protein 529 2 2
MIRT544847 BASP1 brain abundant membrane attached signal protein 1 2 4
MIRT545536 ARF3 ADP ribosylation factor 3 2 2
MIRT547124 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 2
MIRT548070 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT548446 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 2
MIRT548626 DAZAP1 DAZ associated protein 1 2 4
MIRT550259 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT551940 AKAP8 A-kinase anchoring protein 8 2 4
MIRT552511 ZIK1 zinc finger protein interacting with K protein 1 2 4
MIRT554015 SPIRE1 spire type actin nucleation factor 1 2 2
MIRT556647 KPNA2 karyopherin subunit alpha 2 2 4
MIRT559744 ACOX1 acyl-CoA oxidase 1 2 2
MIRT560393 TMEM254 transmembrane protein 254 2 2
MIRT562234 HMGB2 high mobility group box 2 2 2
MIRT563325 ORC4 origin recognition complex subunit 4 2 2
MIRT563697 RPS26 ribosomal protein S26 2 2
MIRT565066 USP25 ubiquitin specific peptidase 25 2 2
MIRT565349 TMED2 transmembrane p24 trafficking protein 2 2 2
MIRT565624 SLC31A1 solute carrier family 31 member 1 2 2
MIRT566379 PNISR PNN interacting serine and arginine rich protein 2 2
MIRT567575 FEM1C fem-1 homolog C 2 2
MIRT569383 DDX20 DEAD-box helicase 20 2 2
MIRT570037 FAM228A family with sequence similarity 228 member A 2 2
MIRT573269 DCAF10 DDB1 and CUL4 associated factor 10 2 2
MIRT573912 PARP1 poly(ADP-ribose) polymerase 1 2 2
MIRT620034 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT635606 ZWILCH zwilch kinetochore protein 2 2
MIRT644413 FRMD6 FERM domain containing 6 2 2
MIRT652528 TM9SF4 transmembrane 9 superfamily member 4 2 2
MIRT656238 MFSD6 major facilitator superfamily domain containing 6 2 2
MIRT661373 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT662530 PNPLA4 patatin like phospholipase domain containing 4 2 2
MIRT675551 MALL mal, T-cell differentiation protein like 2 2
MIRT693650 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT696348 SLC35D2 solute carrier family 35 member D2 2 2
MIRT705815 AKNA AT-hook transcription factor 2 2
MIRT707632 TARDBP TAR DNA binding protein 2 2
MIRT717902 COPS8 COP9 signalosome subunit 8 2 2
MIRT723626 SOBP sine oculis binding protein homolog 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3123 Doxorubicin 31703 NSC123127 approved sensitive High Triple-Negative Breast Cancer cell line (MDA-MB-231, MDA-MB-468)
hsa-mir-3123 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3123 Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-3123 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3123 Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)

Error report submission