miRTarBase - #MIRT058548


—
pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CTTNBP2NL   
Synonyms -
Description CTTNBP2 N-terminal like
Transcript NM_018704   
Expression
Putative miRNA Targets on CTTNBP2NL
3'UTR of CTTNBP2NL
(miRNA target sites are highlighted)		 
>CTTNBP2NL|NM_018704|3'UTR
   1 TCCCTAGGAGGGAGTCTCCACGTTTGACATTCCATCAGATTTCGTCCAAAAGCTCAGTCAGACTTCTGAGTCAGATTATG
  81 TTATTTATTTTGATAGTAGCTGAAACCATCTGTATAATACATTTAGTATATTTCACCATTTTGTATTTTTTTAAGTAGAA
 161 ACTGAGTAGTTTGGATTTTTATGGCTCACATCTTTTTACTGAAGCCAGAAAGGCACCTCAAAGATGTCTCAAGCTCAGCA
 241 GTCACCGTCATGTTGTGATGAAGAAAGCGAATCACCAGGTGGTGATTTGCTATCTATTTGAGAACTAGAATCACTCAACA
 321 CTCATTTTGAATTATGCAGAAGTGGTTCATGCAGATTTTTATTCCAGATGAACATGTTTTAAAAGTGCCTGAAATATGAC
 401 TGCCATATGAATGTGATTCTGCAGCAAAAAACACAAAATAGATCATTTAATTACAGAAAATGAGATCCTCTGTGAATTCT
 481 GAATGTTAAAAACCAACACTGCTTTTAATCCTCTTTTAATGTTTTAATACAAGCTTTGTGTTCTGAAACAAGGCTGCATA
 561 AGTAGAATGGGAATCCTTCTAAAGGTGGGTGTGAACTCACCACAAGCTGAGCTTTATAGAGCCCTTGAGAAACCCTCCTG
 641 AGCACTAAGCAGTTGGGGTGCTGATTTTCTTGTACTTTTGAAAAATTAAGTCACTCCCAGTTTCCTGCATAAGTTCTTGA
 721 ACAGAATGAAATCACATCTCCATTCAAAAAATGTCTCAAGCATCTACTGTTGTGTAAGGAACTTCTGATTCTGATTGCTG
 801 TTACTTGAATAGGAAATGGTTACTCATTCTGTATAAAAGTTTTGCAAGAGAATGAATTTTTTATTCTGTAATCAAAAAGC
 881 AATAACTTGAAATTCACTCTGTAATATTATAGGTCAGTCAGAATTATACAAGTTTTACCAAATTGTTACACTTATTCTCC
 961 AAGCTGCCAGAACCTGGTATCTGTATCTGTAAAACCAAATTAACTTTTGCTTAAATGGGAAGTATACATATATCTGTATA
1041 GATACATTACCCCTTTACATGTTTAACATACACACACTTAAACACATAAATACTAGTGTGATTATATCTTTGGAGTTTGC
1121 AATATAGCATAAAGGACAAGTAGAACTGCACATTAAGATTACCTACCGAAGCAACTAGATGTGGCTGGGACACAATCAAA
1201 GGAGGAATTTTGTCCACAGGAAGGTGAGGAAATTCCAAATGAAGCCTAGATCTTCAGTATCATAAAAAGGCAGAGCTGGC
1281 CAGGCACAGTGGCTCATGCCTGTAATCTTATCACTTTGGGAGGCTGAGATGGGAGGATCTCTTGAGACCAGGTGTTCAAG
1361 ACCAGCCTCATCAACATAGTGAGACCCCATCTCTATTAAAAAAATAAATAGGCAGAGCTAAACTAACCCCAGTGTCACAA
1441 AACTCAACTGGTCATATAAATGAGTGAAACAGGCCTCTCACACAAGCGATGTAAAACAGCTGGGAGCAGTGGGAGCTGTG
1521 GCAAACTAAAGTGCCCAAGCCGCATTTAAAAAGGGCATCTGTTCAGCTCCATCTGCTTGCTGCGGTGCAAGAATGCTAAA
1601 CCAGGATTACCAGTTCTTCACATTTTTTGAAATCCAAATTTTCATGAGAAACATTCTCATTTTTAAATATCAAGAAGTGA
1681 TTTTAAAATGTTTAAATGGTGCTGGTTAAACAAACACGTCTGCAGCTGGATTTAGCTTGCAAGCTGCCAAGTTGCAACCT
1761 CTTTCATTCTAGAAACTTCTGTCATTTTCATCATAGCAAGTCTATGCGGACAAAAGCCTCCAAACTTTCCAACTGTGTAG
1841 GCCAGTACAGCTGGCAAGGTTCATAGAATATAATGGCTATCCCCCTCTGCCAAATAAGACTATCCACAACCCAGCTCAGA
1921 CACAGTGGTTATATGATTTTGTGTCCATACAGGAGAGGCCTTGGTGTCTTCACATACATTCTCTGAGCCAACATCTATCC
2001 AGCAGCCCTGACCTCCTGCTATAATTTAAGTCTATTTCCTTTTAATCTAATAAGAGTTGATAGTAAAAAGGCAGGTGATG
2081 GAAATCAGTGTATAAATCACAATGGAGTATATTGGCAACTCCACAGCTTATAGTTTGATAAAGGCAAATACATGAAAAAT
2161 AAAAATGCTACTAATGCCCCAAGGTGTCTATCAAAATGATGTAGGGGGTATCTTAAACTGTCCAAGGCAATCATGCATTG
2241 AACTTTATTCCTATGCAGAGCCAAAACGAATAGTGTTGATAAAATAGCTAAACTTTCTAAACTGGAGAGGAGGCTACAGT
2321 GCCAGAGAGTTATTGTCTCTTTTGCTTTAAATGGTAATCTTAAAAGTTGCATTGTGCTCTTCCTTTGTTTTGGGATAGAT
2401 ATATATAGAGAGAGATACTATAAGGAAGTTTATTTCTTAGGAAGTGCACTGAATAATGTATTTCTTTTACAGTGTAATAT
2481 GGGGGTGGGGATATGCGAAAGAAATGTGTATTTTTGCTAGTTGCCTACCTTCTGAGATAAATAAGCACAATCTTGCAATG
2561 GATCCAATAACCCAGTTAGGTATTATAGATTAGTATTTAAGTTTGCTGTAGATTGTGTGTGTGTGTGCTAAGTAAAAGTT
2641 CCATGATTCACAATTTTAGTATTAACCCATGTTGCAAAAGCTGTTACTGGCCAACAGATTGTAATGATGTGTACCATATA
2721 ACACAAGCATTAACTAGGCATTAACGTTTGTAAAGCCAAATATACCATGCAGAAGTCTTCATTTTTATAGCAGACTGCAT
2801 TAAAACAAGTTAAATCTTGCTGTTTGGGGGGAAATAGTCTTGTTTGTACAAAGTGAAAAATGGCACAATTTGGGCATATT
2881 TTGTTGGGAAGAGGGGGTGGTGTAGAGGGAGCACTTGACTGTGGCTTTGACAAAACAAATGAAGTCAATGACCCATCCAG
2961 GTTAGACTCCATAAGGAACTAAGACATTGATTTTCTTTAGAGTCTTAGAGCTGGAAAAAGCCTTTACAATAATCCAGTCT
3041 GTGATTTTTTAAACCTTTTGGTGGTTCTGGACCTTTTTGAGAATCTTAGAAAAGCCATGGAGTTTATCCCTAGAAAAATG
3121 AATATGCCTATATGCAAAATTTGTTTGATGGCTTCATAGGATCCAAAGACCCTGAAGCCATCCATGGCTCATGTATTTCT
3201 GCTTAAGAAAGCATAATCTTGTTCTGCTCTCTCATTTTACAAATGATTAATGCATCCCTTTTCAACTACTCCAGCGCTGT
3281 TGCTGCTGCAATGTTAGCAAATGCAAGCCAGAGAGAAGCACTTGAAAATCCTTTGATGTCTAAAAAATGTTCAAATAGTG
3361 TGGATGTTTACATATCTGAAGTTTTCAGCATTTAAGCAAATTAATGATCATTTCAACAAATACTAGCATATCCGGTTTCC
3441 CTTAATAGCCTGTCAGCAGTGCTGCCTTGTCAATTTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGAATTCATAAGG
3521 AGTGCTTCTGATGCTTAGTCCTTGAAATGGAACTTCAACTGTCTTTCAAAACACTGGCTTCAAAATAGGATGTGTTTTCC
3601 TAATGAATCAGAAGTGGGCAATGAGCATTGTTCCACAGGAATAATTTTTAATTTAATTTCTATAAAACTAGTTGAGAAAT
3681 GAGAGCCTGTCCACCCACCATTTGTGTATCAGTGGCCAATTCATTAGTAAAAATAAAGGAGGGGAAAGGAGAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' aaggugacGAUGUUG-GAGGGUCu 5'
                  :|| : | ||||||| 
Target 5' ttgaaaaaTTAAGTCACTCCCAGt 3'
 678 - 701 143.00 -13.00
2 
miRNA  3' aagGUG---ACGAUGUUGGAGGGUCu 5'
             |||   | || ||| || |||| 
Target 5' ttaCACTTATTCTCCAAGCTGCCAGa 3'
 946 - 971 132.00 -18.00
3 
miRNA  3' aaggUGACGAUGU-UGGAGGGUcu 5'
              | ||  ||| :||||:||  
Target 5' aatgAGTGAAACAGGCCTCTCAca 3'
 1459 - 1482 123.00 -12.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31582007 2 COSMIC
COSN15623755 4 COSMIC
COSN26972415 23 COSMIC
COSN26972416 44 COSMIC
COSN30530414 45 COSMIC
COSN30476749 48 COSMIC
COSN31605999 61 COSMIC
COSN30156850 75 COSMIC
COSN28845114 153 COSMIC
COSN32065422 306 COSMIC
COSN31567691 514 COSMIC
COSN7172417 519 COSMIC
COSN31523175 527 COSMIC
COSN28758455 664 COSMIC
COSN31530159 851 COSMIC
COSN20095162 919 COSMIC
COSN1401678 1107 COSMIC
COSN29199746 1299 COSMIC
COSN1401679 1535 COSMIC
COSN28438739 1785 COSMIC
COSN32065134 1888 COSMIC
COSN20095168 2097 COSMIC
COSN20779163 2702 COSMIC
COSN17076507 2719 COSMIC
COSN19173859 3494 COSMIC
COSN29594787 3509 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1315293238 5 dbSNP
rs1443121725 6 dbSNP
rs1398210135 17 dbSNP
rs745684684 19 dbSNP
rs771832194 21 dbSNP
rs369270360 22 dbSNP
rs372108905 23 dbSNP
rs760642456 25 dbSNP
rs530259421 33 dbSNP
rs548345002 34 dbSNP
rs766038451 36 dbSNP
rs1170549343 42 dbSNP
rs776250471 44 dbSNP
rs200227935 45 dbSNP
rs752340773 51 dbSNP
rs1195113404 54 dbSNP
rs1437270765 58 dbSNP
rs1323012891 75 dbSNP
rs1178545976 77 dbSNP
rs1023985335 81 dbSNP
rs370189114 81 dbSNP
rs184283149 98 dbSNP
rs1199044113 103 dbSNP
rs902561596 108 dbSNP
rs1281227419 109 dbSNP
rs1236857930 113 dbSNP
rs1250453148 115 dbSNP
rs999474091 136 dbSNP
rs567471694 139 dbSNP
rs1443055512 146 dbSNP
rs1197210204 156 dbSNP
rs529804596 164 dbSNP
rs925715543 170 dbSNP
rs1375905483 173 dbSNP
rs78254968 178 dbSNP
rs901904702 182 dbSNP
rs1379118959 185 dbSNP
rs975305178 189 dbSNP
rs1181807415 191 dbSNP
rs1178672555 197 dbSNP
rs921091144 206 dbSNP
rs933924411 213 dbSNP
rs996762505 214 dbSNP
rs1258730715 217 dbSNP
rs1029191052 222 dbSNP
rs890477413 225 dbSNP
rs566483490 235 dbSNP
rs952295713 238 dbSNP
rs374850342 240 dbSNP
rs1352936554 241 dbSNP
rs1015178893 247 dbSNP
rs1447274765 248 dbSNP
rs538284039 252 dbSNP
rs899282673 254 dbSNP
rs1463853110 255 dbSNP
rs558509346 269 dbSNP
rs1397946908 270 dbSNP
rs995327924 274 dbSNP
rs1159397227 279 dbSNP
rs1034527764 280 dbSNP
rs1411084567 288 dbSNP
rs1161966619 293 dbSNP
rs1342802838 295 dbSNP
rs894601000 295 dbSNP
rs1243198080 297 dbSNP
rs972352087 318 dbSNP
rs1172636835 319 dbSNP
rs1418994065 320 dbSNP
rs571024098 324 dbSNP
rs1487517188 333 dbSNP
rs1035199123 337 dbSNP
rs1216851271 338 dbSNP
rs1448811434 341 dbSNP
rs1465432377 350 dbSNP
rs569771218 353 dbSNP
rs1335342191 359 dbSNP
rs990960580 368 dbSNP
rs59269118 382 dbSNP
rs1380668721 405 dbSNP
rs1396156799 416 dbSNP
rs1339609318 438 dbSNP
rs916441304 444 dbSNP
rs868610228 445 dbSNP
rs569214749 449 dbSNP
rs1432541414 458 dbSNP
rs1347576805 469 dbSNP
rs1294392367 474 dbSNP
rs538135155 485 dbSNP
rs1461525663 486 dbSNP
rs1419133313 497 dbSNP
rs1167759460 501 dbSNP
rs967604344 509 dbSNP
rs1419335874 512 dbSNP
rs946548925 512 dbSNP
rs538399157 517 dbSNP
rs1476541738 520 dbSNP
rs1220095697 525 dbSNP
rs3795821 532 dbSNP
rs1468968773 535 dbSNP
rs1175642 559 dbSNP
rs957180926 565 dbSNP
rs935353338 566 dbSNP
rs1317063987 581 dbSNP
rs1049543307 589 dbSNP
rs768273708 592 dbSNP
rs921122398 597 dbSNP
rs188627480 603 dbSNP
rs986579864 606 dbSNP
rs776244579 612 dbSNP
rs1328513713 616 dbSNP
rs908497767 618 dbSNP
rs376060933 633 dbSNP
rs939933602 634 dbSNP
rs553166547 638 dbSNP
rs1412029046 644 dbSNP
rs137931309 645 dbSNP
rs761216956 650 dbSNP
rs1182575151 658 dbSNP
rs1262734358 659 dbSNP
rs35738689 662 dbSNP
rs867186823 675 dbSNP
rs1056253947 679 dbSNP
rs545110524 702 dbSNP
rs1480294677 704 dbSNP
rs1251837542 708 dbSNP
rs1206300792 710 dbSNP
rs12142186 714 dbSNP
rs1310236662 718 dbSNP
rs894661098 728 dbSNP
rs1196132483 729 dbSNP
rs1014453748 737 dbSNP
rs887981350 758 dbSNP
rs1306519400 769 dbSNP
rs1445432120 770 dbSNP
rs1413730243 780 dbSNP
rs1173844080 784 dbSNP
rs1024464629 786 dbSNP
rs1299247987 798 dbSNP
rs1463798162 801 dbSNP
rs1357843875 804 dbSNP
rs765789239 809 dbSNP
rs564930521 816 dbSNP
rs903469239 817 dbSNP
rs1396940970 819 dbSNP
rs191667755 820 dbSNP
rs1418606691 828 dbSNP
rs1015188819 831 dbSNP
rs1466101671 835 dbSNP
rs898054856 837 dbSNP
rs1251088248 846 dbSNP
rs1178943443 853 dbSNP
rs1228759458 855 dbSNP
rs534369161 857 dbSNP
rs999104406 858 dbSNP
rs1211132849 862 dbSNP
rs552706707 869 dbSNP
rs1034718535 875 dbSNP
rs763442855 883 dbSNP
rs996629913 898 dbSNP
rs1317001133 905 dbSNP
rs10605173 913 dbSNP
rs71692585 913 dbSNP
rs200546485 916 dbSNP
rs200611314 917 dbSNP
rs199549298 918 dbSNP
rs990624228 922 dbSNP
rs1393714475 924 dbSNP
rs955140816 926 dbSNP
rs1219056236 927 dbSNP
rs1299800704 928 dbSNP
rs1023798010 930 dbSNP
rs1211442042 931 dbSNP
rs1377459594 941 dbSNP
rs1296583509 942 dbSNP
rs1453135391 947 dbSNP
rs184625585 950 dbSNP
rs1161166430 953 dbSNP
rs908381790 956 dbSNP
rs1487361706 958 dbSNP
rs979211661 961 dbSNP
rs1219022977 971 dbSNP
rs140951531 977 dbSNP
rs1477567398 981 dbSNP
rs751955248 984 dbSNP
rs935279446 988 dbSNP
rs796813895 990 dbSNP
rs1189323047 1009 dbSNP
rs1485905340 1011 dbSNP
rs144682874 1016 dbSNP
rs920618604 1023 dbSNP
rs1333263478 1025 dbSNP
rs1293243864 1027 dbSNP
rs930615711 1029 dbSNP
rs923339502 1032 dbSNP
rs1433646621 1037 dbSNP
rs1357824762 1038 dbSNP
rs1296583373 1041 dbSNP
rs1381908189 1042 dbSNP
rs1385737803 1053 dbSNP
rs931970287 1060 dbSNP
rs1290659898 1066 dbSNP
rs1055778502 1070 dbSNP
rs547148281 1078 dbSNP
rs887824164 1079 dbSNP
rs1165581397 1082 dbSNP
rs1476057037 1093 dbSNP
rs61256030 1094 dbSNP
rs1428797504 1096 dbSNP
rs1377908122 1105 dbSNP
rs1207509279 1121 dbSNP
rs371463445 1125 dbSNP
rs1467640574 1130 dbSNP
rs1273037999 1150 dbSNP
rs1045969308 1152 dbSNP
rs1036501084 1161 dbSNP
rs999114209 1164 dbSNP
rs1298412399 1169 dbSNP
rs1327207991 1188 dbSNP
rs1349006434 1189 dbSNP
rs1436205370 1193 dbSNP
rs752876350 1194 dbSNP
rs1055095308 1206 dbSNP
rs1385093711 1208 dbSNP
rs1370418531 1237 dbSNP
rs532225207 1250 dbSNP
rs1462986056 1251 dbSNP
rs1397820649 1254 dbSNP
rs756086588 1260 dbSNP
rs1292083309 1263 dbSNP
rs780046374 1264 dbSNP
rs1003147161 1267 dbSNP
rs1196317654 1268 dbSNP
rs552248633 1269 dbSNP
rs896186602 1274 dbSNP
rs1027983348 1282 dbSNP
rs1242478310 1283 dbSNP
rs148237499 1285 dbSNP
rs1007893948 1294 dbSNP
rs1195525313 1295 dbSNP
rs1451182789 1299 dbSNP
rs41283050 1312 dbSNP
rs961166180 1316 dbSNP
rs1248187692 1338 dbSNP
rs1488701136 1339 dbSNP
rs745749319 1350 dbSNP
rs554872121 1351 dbSNP
rs1177895961 1355 dbSNP
rs973979384 1363 dbSNP
rs1378463221 1365 dbSNP
rs1000558739 1370 dbSNP
rs41283052 1376 dbSNP
rs1170416549 1378 dbSNP
rs1433772330 1380 dbSNP
rs991932869 1385 dbSNP
rs956536765 1390 dbSNP
rs1174932621 1394 dbSNP
rs1437283621 1400 dbSNP
rs915909568 1403 dbSNP
rs950113884 1410 dbSNP
rs533776982 1415 dbSNP
rs150792527 1431 dbSNP
rs953409462 1433 dbSNP
rs1166503799 1437 dbSNP
rs1351944754 1439 dbSNP
rs1281343266 1441 dbSNP
rs368574201 1448 dbSNP
rs1236498882 1450 dbSNP
rs542720706 1451 dbSNP
rs545434723 1454 dbSNP
rs1278866310 1456 dbSNP
rs1239734278 1471 dbSNP
rs1331245315 1474 dbSNP
rs1337289792 1478 dbSNP
rs909307782 1488 dbSNP
rs1375416615 1489 dbSNP
rs558536141 1491 dbSNP
rs942120113 1509 dbSNP
rs1036427041 1516 dbSNP
rs1314347148 1520 dbSNP
rs1280151716 1522 dbSNP
rs1406694496 1529 dbSNP
rs1355755154 1532 dbSNP
rs575942694 1537 dbSNP
rs1470826761 1542 dbSNP
rs1226779495 1543 dbSNP
rs1186206199 1558 dbSNP
rs1485550641 1565 dbSNP
rs1292335774 1566 dbSNP
rs919462399 1578 dbSNP
rs1335207811 1580 dbSNP
rs938840713 1584 dbSNP
rs779873269 1585 dbSNP
rs1445345746 1589 dbSNP
rs1283717243 1602 dbSNP
rs894679235 1603 dbSNP
rs138107052 1612 dbSNP
rs1044739198 1614 dbSNP
rs1236285564 1623 dbSNP
rs1458987568 1624 dbSNP
rs1179197200 1630 dbSNP
rs1236334598 1637 dbSNP
rs1291372126 1638 dbSNP
rs1471542186 1641 dbSNP
rs903511248 1646 dbSNP
rs1232394028 1651 dbSNP
rs1183207159 1653 dbSNP
rs1355916360 1657 dbSNP
rs1414133061 1659 dbSNP
rs1294742763 1660 dbSNP
rs1000611044 1667 dbSNP
rs997108081 1675 dbSNP
rs1344068463 1680 dbSNP
rs1318352381 1694 dbSNP
rs1462290246 1696 dbSNP
rs1049864239 1705 dbSNP
rs1163414318 1708 dbSNP
rs890759353 1712 dbSNP
rs112335044 1718 dbSNP
rs59467877 1719 dbSNP
rs1216509193 1729 dbSNP
rs1026811674 1739 dbSNP
rs113244657 1744 dbSNP
rs1445970073 1745 dbSNP
rs1286159619 1746 dbSNP
rs1274866613 1751 dbSNP
rs1030268257 1763 dbSNP
rs372646365 1769 dbSNP
rs11578515 1770 dbSNP
rs959589236 1776 dbSNP
rs1360790750 1778 dbSNP
rs1218258684 1781 dbSNP
rs1270415457 1783 dbSNP
rs990710906 1802 dbSNP
rs1324462679 1803 dbSNP
rs1368216507 1803 dbSNP
rs1022978246 1805 dbSNP
rs953387255 1806 dbSNP
rs1319765820 1808 dbSNP
rs1196266507 1809 dbSNP
rs1277880073 1820 dbSNP
rs1440175127 1823 dbSNP
rs986031874 1829 dbSNP
rs1419005905 1832 dbSNP
rs561274440 1836 dbSNP
rs909233951 1856 dbSNP
rs1451404809 1858 dbSNP
rs1251261944 1864 dbSNP
rs963368157 1866 dbSNP
rs1468819759 1871 dbSNP
rs971357154 1884 dbSNP
rs1202098402 1888 dbSNP
rs575061758 1900 dbSNP
rs1273248588 1903 dbSNP
rs1181646962 1920 dbSNP
rs1257606364 1934 dbSNP
rs540510760 1935 dbSNP
rs1441049868 1938 dbSNP
rs919307802 1945 dbSNP
rs560734947 1949 dbSNP
rs1384739323 1950 dbSNP
rs143827050 1958 dbSNP
rs1295820605 1962 dbSNP
rs1440454224 1967 dbSNP
rs1354388261 1968 dbSNP
rs1171360423 1971 dbSNP
rs1431916529 1974 dbSNP
rs552262644 1976 dbSNP
rs916069900 1978 dbSNP
rs1168972561 1979 dbSNP
rs949012398 1990 dbSNP
rs1454767560 1994 dbSNP
rs1269304347 1996 dbSNP
rs1402185256 1998 dbSNP
rs1175465677 2012 dbSNP
rs1412834631 2012 dbSNP
rs1043286400 2019 dbSNP
rs903563660 2022 dbSNP
rs562483972 2032 dbSNP
rs1000456120 2034 dbSNP
rs747699509 2035 dbSNP
rs1399582885 2051 dbSNP
rs189806649 2061 dbSNP
rs1349498694 2062 dbSNP
rs1304046709 2066 dbSNP
rs1222603087 2067 dbSNP
rs1342110810 2071 dbSNP
rs548188860 2081 dbSNP
rs1373027134 2085 dbSNP
rs1299053464 2088 dbSNP
rs397981259 2094 dbSNP
rs5777121 2094 dbSNP
rs1388558317 2097 dbSNP
rs1312511275 2101 dbSNP
rs1274168554 2103 dbSNP
rs568301727 2119 dbSNP
rs1030606413 2122 dbSNP
rs1202119792 2128 dbSNP
rs1280355956 2129 dbSNP
rs1408675048 2130 dbSNP
rs888935343 2131 dbSNP
rs1487693257 2137 dbSNP
rs1007518788 2141 dbSNP
rs1213964643 2147 dbSNP
rs1474113124 2154 dbSNP
rs1264942323 2161 dbSNP
rs182432928 2164 dbSNP
rs1449081121 2168 dbSNP
rs1194420459 2172 dbSNP
rs369439448 2176 dbSNP
rs1211242325 2177 dbSNP
rs1483929128 2179 dbSNP
rs896943514 2183 dbSNP
rs57064329 2190 dbSNP
rs1316803024 2191 dbSNP
rs1308342721 2192 dbSNP
rs1461624684 2204 dbSNP
rs1230558166 2206 dbSNP
rs1027234504 2208 dbSNP
rs547274472 2209 dbSNP
rs1174853534 2210 dbSNP
rs894942380 2211 dbSNP
rs1287138519 2217 dbSNP
rs1453155171 2231 dbSNP
rs960370025 2243 dbSNP
rs1161361981 2255 dbSNP
rs868675633 2264 dbSNP
rs147258703 2268 dbSNP
rs1419219432 2269 dbSNP
rs1188195226 2278 dbSNP
rs879237905 2283 dbSNP
rs1296559168 2288 dbSNP
rs1362755803 2295 dbSNP
rs1382994651 2297 dbSNP
rs753975959 2297 dbSNP
rs1485915769 2300 dbSNP
rs766583318 2303 dbSNP
rs1329155763 2306 dbSNP
rs1211195005 2327 dbSNP
rs187153564 2329 dbSNP
rs1333104099 2331 dbSNP
rs1272998194 2336 dbSNP
rs1024872621 2338 dbSNP
rs1342422577 2340 dbSNP
rs970621697 2345 dbSNP
rs1304116563 2346 dbSNP
rs1362835685 2347 dbSNP
rs916104673 2349 dbSNP
rs1459856423 2354 dbSNP
rs1393674301 2356 dbSNP
rs981476251 2360 dbSNP
rs1031676134 2361 dbSNP
rs1237394212 2364 dbSNP
rs1370925621 2367 dbSNP
rs1169377644 2369 dbSNP
rs1428589663 2371 dbSNP
rs866846328 2372 dbSNP
rs538760751 2373 dbSNP
rs1287708881 2381 dbSNP
rs1485954492 2383 dbSNP
rs565504595 2399 dbSNP
rs978993705 2400 dbSNP
rs1267055158 2403 dbSNP
rs1210753252 2404 dbSNP
rs1227024580 2407 dbSNP
rs140719384 2407 dbSNP
rs575311804 2409 dbSNP
rs1254234897 2415 dbSNP
rs1370075913 2417 dbSNP
rs537882971 2419 dbSNP
rs912843127 2421 dbSNP
rs1462218067 2422 dbSNP
rs1157002634 2427 dbSNP
rs1365617662 2440 dbSNP
rs3762332 2447 dbSNP
rs1036695158 2458 dbSNP
rs896785196 2462 dbSNP
rs12122093 2465 dbSNP
rs1200284057 2468 dbSNP
rs1162919293 2477 dbSNP
rs774925027 2478 dbSNP
rs1388344718 2484 dbSNP
rs1326479778 2489 dbSNP
rs12122098 2497 dbSNP
rs1051517359 2498 dbSNP
rs888979802 2499 dbSNP
rs1046257177 2508 dbSNP
rs540874288 2509 dbSNP
rs779118416 2512 dbSNP
rs1016192084 2525 dbSNP
rs899056950 2526 dbSNP
rs993509212 2536 dbSNP
rs144676390 2539 dbSNP
rs1410237965 2544 dbSNP
rs1012095049 2549 dbSNP
rs1021735988 2551 dbSNP
rs1354664263 2553 dbSNP
rs1310761530 2556 dbSNP
rs960067328 2558 dbSNP
rs1433559390 2559 dbSNP
rs577334121 2569 dbSNP
rs746007891 2572 dbSNP
rs1173652453 2576 dbSNP
rs1479262377 2591 dbSNP
rs772065878 2592 dbSNP
rs1023016603 2599 dbSNP
rs985626915 2606 dbSNP
rs1254227441 2607 dbSNP
rs545938006 2610 dbSNP
rs145578129 2614 dbSNP
rs780150504 2614 dbSNP
rs978878341 2614 dbSNP
rs562602071 2618 dbSNP
rs1485367506 2619 dbSNP
rs926222325 2620 dbSNP
rs531421150 2642 dbSNP
rs934944959 2644 dbSNP
rs918258221 2648 dbSNP
rs11035 2656 dbSNP
rs1228716790 2662 dbSNP
rs114551743 2667 dbSNP
rs1187073808 2675 dbSNP
rs1291027893 2683 dbSNP
rs1366995840 2690 dbSNP
rs144739528 2691 dbSNP
rs1165287671 2694 dbSNP
rs1399295300 2706 dbSNP
rs916369271 2713 dbSNP
rs947794287 2727 dbSNP
rs1383366317 2729 dbSNP
rs148552246 2738 dbSNP
rs1373394418 2742 dbSNP
rs1414704158 2746 dbSNP
rs189646432 2747 dbSNP
rs1474972804 2750 dbSNP
rs1394996161 2753 dbSNP
rs763941269 2764 dbSNP
rs1283473492 2769 dbSNP
rs752791841 2784 dbSNP
rs1330924780 2785 dbSNP
rs1270990045 2790 dbSNP
rs570574735 2792 dbSNP
rs1052328798 2795 dbSNP
rs1379360806 2796 dbSNP
rs1285609319 2803 dbSNP
rs893696622 2804 dbSNP
rs943201877 2805 dbSNP
rs1011605077 2807 dbSNP
rs539275628 2816 dbSNP
rs180760520 2817 dbSNP
rs954194154 2822 dbSNP
rs1163174765 2829 dbSNP
rs1405144022 2831 dbSNP
rs1197267488 2832 dbSNP
rs1414726908 2840 dbSNP
rs1006889520 2843 dbSNP
rs1474451071 2850 dbSNP
rs1241648464 2857 dbSNP
rs1253645010 2858 dbSNP
rs1189321284 2869 dbSNP
rs1251072279 2890 dbSNP
rs185606305 2890 dbSNP
rs148799355 2892 dbSNP
rs1254170822 2894 dbSNP
rs1047633768 2895 dbSNP
rs371831281 2896 dbSNP
rs142937259 2902 dbSNP
rs895812466 2909 dbSNP
rs1212480485 2913 dbSNP
rs768307892 2914 dbSNP
rs1422609134 2915 dbSNP
rs1297625744 2919 dbSNP
rs1476743183 2920 dbSNP
rs1367887325 2932 dbSNP
rs554669514 2937 dbSNP
rs1436188280 2940 dbSNP
rs72699026 2941 dbSNP
rs1325749002 2942 dbSNP
rs983844288 2946 dbSNP
rs75413259 2947 dbSNP
rs1000224854 2948 dbSNP
rs1169233352 2951 dbSNP
rs1033161986 2955 dbSNP
rs151111934 2958 dbSNP
rs1190612929 2966 dbSNP
rs927800653 2971 dbSNP
rs1248290208 2972 dbSNP
rs1202207047 2977 dbSNP
rs751371246 2979 dbSNP
rs1229896242 2980 dbSNP
rs754703580 2988 dbSNP
rs935176191 2990 dbSNP
rs1277222358 3015 dbSNP
rs1368945114 3016 dbSNP
rs989499387 3031 dbSNP
rs1340270578 3034 dbSNP
rs1217243380 3036 dbSNP
rs1276935318 3039 dbSNP
rs1052254938 3040 dbSNP
rs1370130532 3040 dbSNP
rs1308930314 3044 dbSNP
rs139502278 3045 dbSNP
rs946621907 3050 dbSNP
rs1175241957 3051 dbSNP
rs1433649877 3057 dbSNP
rs1427213719 3062 dbSNP
rs922842686 3064 dbSNP
rs780930023 3070 dbSNP
rs1308522012 3074 dbSNP
rs954528983 3076 dbSNP
rs190160967 3100 dbSNP
rs889750570 3107 dbSNP
rs747706719 3131 dbSNP
rs1019631005 3132 dbSNP
rs141469342 3134 dbSNP
rs943126840 3138 dbSNP
rs556789436 3139 dbSNP
rs369030525 3147 dbSNP
rs994322543 3148 dbSNP
rs1037453541 3163 dbSNP
rs1350330036 3167 dbSNP
rs1289189508 3168 dbSNP
rs11102478 3173 dbSNP
rs920462135 3183 dbSNP
rs929120574 3187 dbSNP
rs1432468927 3189 dbSNP
rs1173904808 3191 dbSNP
rs952996447 3196 dbSNP
rs1396331616 3217 dbSNP
rs576253855 3218 dbSNP
rs1156906058 3229 dbSNP
rs895712146 3230 dbSNP
rs1358304572 3234 dbSNP
rs1432462334 3243 dbSNP
rs1014686481 3254 dbSNP
rs1044433153 3266 dbSNP
rs1255055271 3268 dbSNP
rs1386668248 3271 dbSNP
rs1483982786 3272 dbSNP
rs1258283998 3275 dbSNP
rs1207438524 3276 dbSNP
rs905856794 3277 dbSNP
rs541903207 3286 dbSNP
rs1301941682 3292 dbSNP
rs969019932 3303 dbSNP
rs559227902 3307 dbSNP
rs1332860767 3308 dbSNP
rs143986849 3310 dbSNP
rs182430018 3311 dbSNP
rs1175637 3332 dbSNP
rs1351697807 3350 dbSNP
rs1010362598 3363 dbSNP
rs988030120 3364 dbSNP
rs1030346132 3365 dbSNP
rs1161025124 3367 dbSNP
rs955620114 3373 dbSNP
rs1218230738 3376 dbSNP
rs1165128831 3380 dbSNP
rs1425012375 3381 dbSNP
rs1259119539 3387 dbSNP
rs1187412331 3392 dbSNP
rs367607555 3393 dbSNP
rs1249190919 3397 dbSNP
rs946663494 3402 dbSNP
rs986103429 3405 dbSNP
rs910242943 3406 dbSNP
rs372588020 3422 dbSNP
rs1265080516 3429 dbSNP
rs1050739343 3433 dbSNP
rs868479479 3434 dbSNP
rs551413101 3435 dbSNP
rs1227771751 3437 dbSNP
rs942726467 3448 dbSNP
rs1242454234 3474 dbSNP
rs112446824 3476 dbSNP
rs1371013375 3476 dbSNP
rs547886709 3476 dbSNP
rs561100067 3476 dbSNP
rs773506995 3476 dbSNP
rs778726333 3476 dbSNP
rs777193152 3480 dbSNP
rs920303382 3484 dbSNP
rs1191127191 3485 dbSNP
rs1210845329 3488 dbSNP
rs748805300 3488 dbSNP
rs1024332594 3492 dbSNP
rs564438320 3492 dbSNP
rs1204509267 3494 dbSNP
rs1231044203 3494 dbSNP
rs1330475689 3494 dbSNP
rs867453632 3494 dbSNP
rs1377959530 3496 dbSNP
rs1388299090 3498 dbSNP
rs1402032101 3500 dbSNP
rs1159424934 3504 dbSNP
rs375127971 3516 dbSNP
rs779701192 3517 dbSNP
rs1436274421 3524 dbSNP
rs771626592 3537 dbSNP
rs1371912478 3549 dbSNP
rs1044286182 3556 dbSNP
rs1373916015 3557 dbSNP
rs1377563684 3567 dbSNP
rs1190613622 3570 dbSNP
rs1199957679 3575 dbSNP
rs1442290607 3578 dbSNP
rs981809704 3591 dbSNP
rs905904504 3593 dbSNP
rs1483413090 3596 dbSNP
rs1276806765 3597 dbSNP
rs1259693192 3599 dbSNP
rs956445231 3604 dbSNP
rs988261104 3606 dbSNP
rs1256526117 3607 dbSNP
rs915091923 3619 dbSNP
rs549611894 3628 dbSNP
rs935968403 3631 dbSNP
rs1054470475 3634 dbSNP
rs891857193 3638 dbSNP
rs1287287892 3641 dbSNP
rs1410104327 3642 dbSNP
rs372087050 3644 dbSNP
rs1351971215 3647 dbSNP
rs985960994 3656 dbSNP
rs1010833280 3662 dbSNP
rs1320874973 3663 dbSNP
rs1029859608 3665 dbSNP
rs891269987 3672 dbSNP
rs944616595 3686 dbSNP
rs1274814024 3688 dbSNP
rs1007177623 3690 dbSNP
rs369990210 3701 dbSNP
rs1177956540 3705 dbSNP
rs1181936857 3707 dbSNP
rs1473020435 3707 dbSNP
rs964377584 3711 dbSNP
rs973043168 3720 dbSNP
rs1185436015 3723 dbSNP
rs1027421092 3724 dbSNP
rs1256767647 3726 dbSNP
rs950527296 3730 dbSNP
rs1267202963 3735 dbSNP
rs1326788141 3735 dbSNP
rs1470903015 3740 dbSNP
rs1330702323 3741 dbSNP
rs1282130225 3750 dbSNP
rs1177406564 3753 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 55917.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aaggugacGAUGUUG-GAGGGUCu 5'
                  :|| : | ||||||| 
Target 5' ---aaaaaUUAAGUCACUCCCAGu 3'
 		1 - 21
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000271277.6 | 3UTR | AAAAAUUAAGUCACUCCCAGUUUCCUGCAUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000271277.6 | 3UTR | AAAAAUUAAGUCACUCCCAGUUUCCUGCAUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
HNSC 0.373 0.38 0.500 0.33 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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