miRTarBase - #MIRT064719


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pre-miRNA Information
pre-miRNA hsa-mir-519c   
Genomic Coordinates chr19: 53686469 - 53686555
Description Homo sapiens miR-519c stem-loop
Comment The 5' arm of this precursor expresses a product related to miR-526 (previously named miR-526c here). Landgraf et al. confirm mature miRNA expression from both arms of the precursor .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-519c-3p
Sequence 54| AAAGUGCAUCUUUUUAGAGGAU |75
Evidence Experimental
Experiments Array-cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 2 19 + 53686523 29233923 MiREDiBase
A-to-I 3 19 + 53686524 29233923 MiREDiBase
A-to-I 8 19 + 53686529 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1164669230 4 dbSNP
rs764425172 8 dbSNP
rs1377433094 10 dbSNP
rs751997873 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CCND2   
Synonyms KIAK0002, MPPH3
Description cyclin D2
Transcript NM_001759   
Expression
Putative miRNA Targets on CCND2
3'UTR of CCND2
(miRNA target sites are highlighted)		 
>CCND2|NM_001759|3'UTR
   1 GGATGCCAGTTGGGCCGAAAGAGAGAGACGCGTCCATAATCTGGTCTCTTCTTCTTTCTGGTTGTTTTTGTTCTTTGTGT
  81 TTTAGGGTGAAACTTAAAAAAAAAATTCTGCCCCCACCTAGATCATATTTAAAGATCTTTTAGAAGTGAGAGAAAAAGGT
 161 CCTACGAAAACGGAATAATAAAAAGCATTTGGTGCCTATTTGAAGTACAGCATAAGGGAATCCCTTGTATATGCGAACAG
 241 TTATTGTTTGATTATGTAAAAGTAATAGTAAAATGCTTACAGGAAAACCTGCAGAGTAGTTAGAGAATATGTATGCCTGC
 321 AATATGGGAACAAATTAGAGGAGACTTTTTTTTTTCATGTTATGAGCTAGCACATACACCCCCTTGTAGTATAATTTCAA
 401 GGAACTGTGTACGCCATTTATGGCATGATTAGATTGCAAAGCAATGAACTCAAGAAGGAATTGAAATAAGGAGGGACATG
 481 ATGGGGAAGGAGTACAAAACAATCTCTCAACATGATTGAACCATTTGGGATGGAGAAGCACCTTTGCTCTCAGCCACCTG
 561 TTACTAAGTCAGGAGTGTAGTTGGATCTCTACATTAATGTCCTCTTGCTGTCTACAGTAGCTGCTACCTAAAAAAAGATG
 641 TTTTATTTTGCCAGTTGGACACAGGTGATTGGCTCCTGGGTTTCATGTTCTGTGACATCCTGCTTCTTCTTCCAAATGCA
 721 GTTCATTGCAGACACCACCATATTGCTATCTAATGGGGAAATGTAGCTATGGGCCATAACCAAAACTCACATGAAACGGA
 801 GGCAGATGGAGACCAAGGGTGGGATCCAGAATGGAGTCTTTTCTGTTATTGTATTTAAAAGGGTAATGTGGCCTTGGCAT
 881 TTCTTCTTAGAAAAAAACTAATTTTTGGTGCTGATTGGCATGTCTGGTTCACAGTTTAGCATTGTTATAAACCATTCCAT
 961 TCGAAAAGCACTTTGAAAAATTGTTCCCGAGCGATAGATGGGATGGTTTATGCAAGTCATGCTGAATACTCCTCCCCTCT
1041 TCTCTTTTGCCCCCTCCCTTCCTGCCCCCAGTCTGGGTTACTCTTCGCTTCTGGTATCTGGCGTTCTTTGGTACACAGTT
1121 CTGGTGTTCCTACCAGGACTCAAGAGACACCCCTTCCTGCTGACATTCCCATCACAACATTCCTCAGACAAGCCTGTAAA
1201 CTAAAATCTGTTACCATTCTGATGGCACAGAAGGATCTTAATTCCCATCTCTATACTTCTCCTTTGGACATGGAAAGAAA
1281 AGTTATTGCTGGTGCAAAGATAGATGGCTGAACATCAGGGTGTGGCATTTTGTTCCCTTTTCCGTTTTTTTTTTTTTATT
1361 GTTGTTGTTAATTTTATTGCAAAGTTGTATTCAGCGTACTTGAATTTTTCTTCCTCTCCACTTCTTAGAGGCATTCAGTT
1441 AGCAAAGAGGTTGGAGCAACAACTTTTTTTTTTTTTTTTGCACAATTGTAATTGACAGGTAATGAAGCTATTTGTTAAAA
1521 TATTTGCCTTTTTAAGTAAAAAAGAAAAATCAGAACAGGGCTATTTGAAGAATTATTTTATACACAGATTCTGCCTTGTT
1601 TCATAGTATGAGGGTTGAAGACGGAAAACAATCTAAGGGTCTCTCATTTTTTTAATTTTGTTTTGTTCAGTTTGGTTTTT
1681 TTTTTTTTTTGCGCTGCTAAGAAGCTAAAGTCATCCATCCTTATTCACGTTGACAGTACCTAGCTGTAATGTTTCACAGA
1761 GTGTGCTGCTATTTTATAAACATTTTTATAATATATTATTTTACTGCTTAAATTCCAAGTCCTGAAGTAGATGGTTGAGA
1841 TATGAGTTCTTCGTACTGGAAAAGCCCTTCCGTAGTTTGTTTTCTTCTGGTAGCATATTCATGGTTGTTTTTTTTTTTCT
1921 TTTTTGGTTTTTTGGTTTTTTTTTTTTCCTCTGATCACATTCTTCAAAGACGGAGTATTCTTTACCTCAGGTTTACTGGA
2001 CAAAATCAATAACTACAAAAGGCAATGATTCACGCTTTTGTTTTCATAATACCTCACAACCGTACAGTTTCTGCTTGGGA
2081 GCCCATTCGCATGAGGAATACAGAAGCAGTGTGAGCAGGGCTGACTCCCTCTCAGGTGGAAGGCAGGGCGGTCTCACTCC
2161 CAGGGACCTTTTTGGTCATGGAGGCCATCGGGCTCCCAGTTAGACCCTGGTATCCTCATCATGATGGAAAAAATACATTG
2241 AACCAAGGGATCCTCCCTCCCCTTCAAGGCAGACGTTCAGTACAAACATTTATGCGGTAGGCTCAGATGTCGTAATTTGC
2321 ACTTAGGTACCAGGTGTCAGGAAACAGACTAAAAAGAATTCCACCAGGCTGTTTGGAGATCCTCATCTTGGAGCTTTTTC
2401 AAAAGCGGGGCTTCATCTGCAAAGGGCCCTTTCATCTTGAAGTTTTTCCCCTCCGTCTTTCCCCTCCCCTGGCATGGACA
2481 CCTTGTGTTTAGGATCATCTCTGCAGGTTTCCTAGGTCTGAATCTGCGAGTAGATGAACCTGCAGCAAGCAGCGTTTATG
2561 GTGCTTCCTTCTCCCTCCTCTGTCTCAAACTGCGCAGGCAAGCACTATGCAAGCCCAGGCCCTCTGCTGAGCGGTACTAA
2641 ACGGTCGGGTTTTCAATCACACTGAATTGGCAGGATAAGAAAAATAGGTCAGATAAGTATGGGATGATAGTTGAAGGGAG
2721 GTGAAGAGGCTGCTTCTCTACAGAGGTGAAATTCCAGATGAGTCAGTCTCTTGGGAAGTGTGTTTAGAAGGGTTCAGGAC
2801 TTTGTGAGTTAGCATGACCCTAAAATTCTAGGGGATTTCTGGTGGGACAATGGGTGGTGAATTCTGAAGTTTTGGAGAGG
2881 GAAGTGGAGCAGCCAGCAAGTAAGCTAGCCAGAGTTTTCTCAAGAGCCAGCTTTGCTCAGCACACTCTCCTGGGCCCCAA
2961 GGAGTCCCACGGAATGGGGAAAGCGGGAACCCTGGAGTTCTTGGGAATCTTGGAGCCTAAAGAGAAACCGAGGTGCAAAT
3041 TCATTTCATGGTGACTGACCCTTGAGCTTAAACAGAAGCAGCAAATGAAAGAACCGGACAAATAAGGAAGGGCACAAGCC
3121 TACCCGACTCTATTTACAGTCTGTAACTTTCCACTCTTCCTGTAGTCCCGAGGCCCCTGGGTCCTTCTAGCTTTTCTCTT
3201 TCCCATCCTTGGGGCCTTGTGTGATGATGGGTGTGGGGCTGCCGATGGGAAAGTCGGGGGTTGTTAGGCTTTTCTGCCTG
3281 CTCCTGCTTAAACACAAGAAGGAATCCTGGATTTTGCCCTCTCCTTAGCTCTTAGTCTCTTTGGTAGGAGTTTTGTTCCA
3361 GAGGAGCTCTCCCCCTTGGATTTGAACTTGCTCTTTTTGTTGTTGTTGTTCTTTCTCTTCTTTTTCTTACCTCCCACTAA
3441 AGGGGTTCCAAATTATCCTGGTCTTTTTCTACCTTGTTGTGTTTCTATCTCGTCTTTACTTCCATCTGTTTGTTTTTTTC
3521 TCCATCAGTGGGGGCCGAGTTGTTCCCCCAGCCTGCCAAATTTTGATCCTTCCCCTCTTTTGGCCAAATCCTAGGGGGAA
3601 GAAATCCTAGTATGCCAAAAATATATGCTAAGCATAATTAAACTCCATGCGGGTCCATAACAGCCAAGAAGCCTGCAGGA
3681 GAAAGCCAAGGGCAGTTCCCTCCGCAGAACACCCCATGCGTGCTGAGAGGCGAGCTCCTTGAAGAAGGGGCTGTTCTTCC
3761 AGGAGGCCTTATTTTGAACTGCCTCAGGACCCCACTGGAGAGCACAGCATGCCTTACTACTGGGTCATCCTTGGTCTATG
3841 TGCTCTGTACTGGAGGCTCTGTTCTGCCTCTTATCAGCCAGGTCAGGGGCACACATGGCTTAAGTGACAAAGCCAGAGGA
3921 GAAGACAACCCTGACAGCATCACGCTGCATCCCATTGCTAGCAGGATTGGCAACTCTTCAGACGGAGCTGCGCTTCCCTG
4001 CAGTCTAGCACCTCTAGGGCCTCTCCAGACTGTGCCCTGGGAGCTCTGGGACTGAAAGGTTAAGAACATAAGGCAGGATC
4081 AGATGACTCTCTCCAAGAGGGCAGGGGAATTTTCTCTCCATGGGCCACAGGGGACAGGGCTGGGAGAAGAAATAGACTTG
4161 CACCTTATGTCATGTAAATAATTGATTTTCTAGTTCAAGAAGATAATATTGGTAGTGTGGGAATTGGAGGTAGGAAGGGG
4241 AGGAAGTCTGAGTAAGCCAGTTGGCTTCTAAGCCAAAAGGATTCCTCTTTGTTTATCTCTGAGACAGTCCAACCTTGAGA
4321 ATAGCTTTAAAAGGGAAATTAATGCTGAGATGATAAAGTCCCCTTAAGCCAACAAACCCTCTGTAGCTATAGAATGAGTG
4401 CAGGTTTCTATTGGTGTGGACTCAGAGCAATTTACAAGAGCTGTTCATGCAGCCATCCATTTGTGCAAAATAGGGTAAGA
4481 AGATTCAAGAGGATATTTATTACTTCCTCATACCACATGGCTTTTGATGATTCTGGATTCTAAACAACCCAGAATGGTCA
4561 TTTCAGGCACAACGATACTACATTCGTGTGTGTCTGCTTTTAAACTTGGCTGGGCTATCAGACCCTATTCTCGGCTCAGG
4641 TTTTGAGAAGCCATCAGCAAATGTGTACGTGCATGCTGTAGCTGCAGCCTGCATCCCTTCGCCTGCAGCCTACTTTGGGG
4721 AAATAAAGTGCCTTACTGACTGTAGCCATTACAGTATCCAATGTCTTTTGACAGGTGCCTGTCCTTGAAAAACAAAGTTT
4801 CTATTTTTATTTTTAATTGGTTTAGTTCTTAACTGCTGGCCAACTCTTACATCCCCAGCAAATCATCGGGCCATTGGATT
4881 TTTTCCATTATGTTCATCACCCTTATATCATGTACCTCAGATCTCTCTCTCTCTCCTCTCTCTCAGTTATGTAGTTTCTT
4961 GTCTTGGACTTTTTTTTTTCTTTTCTTTTTCTTTTTTTTTTTGCTTTAAAACAAGTGTGATGCCATATCAAGTCCATGTT
5041 ATTCTCTCACAGTGTACTCTATAAGAGGTGTGGGTGTCTGTTTGGTCAGGATGTTAGAAAGTGCTGATAAGTAGCATGAT
5121 CAGTGTATGCGAAAAGGTTTTTAGGAAGTATGGCAAAAATGTTGTATTGGCTATGATGGTGACATGATATAGTCAGCTGC
5201 CTTTTAAGAGGTCTTATCTGTTCAGTGTTAAGTGATTTAAAAAAATAATAACCTGTTTTCTGACTAGTTTAAAGATGGAT
5281 TTGAAAATGGTTTTGAATGCAATTAGGTTATGCTATTTGGACAATAAACTCACCTTGACCTAAATTAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uaggAGAUUUUUCUACGUGAAa 5'
              | | : ||  ||||||| 
Target 5' cagaTGTCGTAATTTGCACTTa 3'
 2304 - 2325 146.00 -6.50
2 
miRNA  3' uaGGAGAUU-UUUCUACGUGAAa 5'
            |:|| :| ::|| |||:||| 
Target 5' ctCTTCAGACGGAGCTGCGCTTc 3'
 3974 - 3996 144.00 -12.10
3 
miRNA  3' uaGGAGAUUUUUCUACGUGAAa 5'
            | |: :||||   |||||| 
Target 5' tcCATTCGAAAA---GCACTTt 3'
 956 - 974 128.00 -8.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30168848 10 COSMIC
COSN31500620 12 COSMIC
COSN26969661 17 COSMIC
COSN32053010 18 COSMIC
COSN32057229 30 COSMIC
COSN2374893 31 COSMIC
COSN31597983 32 COSMIC
COSN26439950 33 COSMIC
COSN15666680 36 COSMIC
COSN18736484 70 COSMIC
COSN30158846 90 COSMIC
COSN31611265 106 COSMIC
COSN5944130 127 COSMIC
COSN31528544 138 COSMIC
COSN31572178 168 COSMIC
COSN16634342 172 COSMIC
COSN14631860 173 COSMIC
COSN31546075 235 COSMIC
COSN8540200 264 COSMIC
COSN31567448 273 COSMIC
COSN30176336 295 COSMIC
COSN24304316 307 COSMIC
COSN16707344 412 COSMIC
COSN9560818 435 COSMIC
COSN31609309 523 COSMIC
COSN8586184 529 COSMIC
COSN31529359 538 COSMIC
COSN26577434 547 COSMIC
COSN31577123 637 COSMIC
COSN32135386 691 COSMIC
COSN31571870 865 COSMIC
COSN19430573 869 COSMIC
COSN31577113 882 COSMIC
COSN30169740 1048 COSMIC
COSN31556491 1059 COSMIC
COSN31548012 1205 COSMIC
COSN31486519 1236 COSMIC
COSN22443772 1238 COSMIC
COSN21758142 1242 COSMIC
COSN20109089 1358 COSMIC
COSN27219661 1358 COSMIC
COSN23932231 1359 COSMIC
COSN31583872 1362 COSMIC
COSN8586185 1388 COSMIC
COSN31537011 1397 COSMIC
COSN15660713 1403 COSMIC
COSN31575152 1416 COSMIC
COSN30158133 1455 COSMIC
COSN31528063 1455 COSMIC
COSN20109093 1480 COSMIC
COSN27229112 1480 COSMIC
COSN31523253 1511 COSMIC
COSN31565165 1554 COSMIC
COSN31487367 1592 COSMIC
COSN31529937 1592 COSMIC
COSN9750202 1624 COSMIC
COSN31608752 1634 COSMIC
COSN31545811 1647 COSMIC
COSN26304963 1665 COSMIC
COSN28667784 1666 COSMIC
COSN20109094 1691 COSMIC
COSN20109095 1691 COSMIC
COSN31606948 1718 COSMIC
COSN5834345 1776 COSMIC
COSN31521955 1832 COSMIC
COSN31607873 1845 COSMIC
COSN31514934 1872 COSMIC
COSN31585762 1873 COSMIC
COSN26677978 1876 COSMIC
COSN27566405 1910 COSMIC
COSN29398863 1927 COSMIC
COSN28685907 2261 COSMIC
COSN20092478 2321 COSMIC
COSN5322928 2668 COSMIC
COSN9750204 3139 COSMIC
COSN9560831 3258 COSMIC
COSN21112404 3335 COSMIC
COSN5716463 3445 COSMIC
COSN22129158 3492 COSMIC
COSN20092479 3493 COSMIC
COSN22129159 3493 COSMIC
COSN26634986 3509 COSMIC
COSN31527450 3578 COSMIC
COSN31578792 3651 COSMIC
COSN19656168 3705 COSMIC
COSN22144126 3806 COSMIC
COSN31960737 3891 COSMIC
COSN25394617 4121 COSMIC
COSN25398982 4123 COSMIC
COSN8586187 4139 COSMIC
COSN31568026 4200 COSMIC
COSN27684047 4234 COSMIC
COSN22396164 4311 COSMIC
COSN1573871 4365 COSMIC
COSN29255266 4431 COSMIC
COSN31520552 4442 COSMIC
COSN31602714 4474 COSMIC
COSN31568880 4482 COSMIC
COSN9560835 4541 COSMIC
COSN21739081 4551 COSMIC
COSN31584730 4599 COSMIC
COSN24304154 4608 COSMIC
COSN31583055 4633 COSMIC
COSN8586188 4656 COSMIC
COSN31596341 4721 COSMIC
COSN4702728 4766 COSMIC
COSN15662326 4780 COSMIC
COSN9560839 4785 COSMIC
COSN31483056 4847 COSMIC
COSN31578960 4900 COSMIC
COSN31591486 4936 COSMIC
COSN21127654 4948 COSMIC
COSN31515734 4959 COSMIC
COSN31592922 5005 COSMIC
COSN5834346 5128 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs757476760 7 dbSNP
rs375075998 10 dbSNP
rs1423103141 14 dbSNP
rs1165229962 16 dbSNP
rs745670137 17 dbSNP
rs201029184 18 dbSNP
rs558839529 20 dbSNP
rs71534272 20 dbSNP
rs780008663 20 dbSNP
rs746875633 28 dbSNP
rs372914898 30 dbSNP
rs576728767 31 dbSNP
rs149455238 32 dbSNP
rs182223310 33 dbSNP
rs772799857 35 dbSNP
rs369380641 37 dbSNP
rs1238406756 43 dbSNP
rs1301620504 45 dbSNP
rs768083147 47 dbSNP
rs1371672162 49 dbSNP
rs767807041 49 dbSNP
rs775868165 50 dbSNP
rs1408257063 58 dbSNP
rs968362974 61 dbSNP
rs978357717 69 dbSNP
rs1173372265 70 dbSNP
rs924380708 79 dbSNP
rs745348060 83 dbSNP
rs1427476407 94 dbSNP
rs1198359304 96 dbSNP
rs202049688 96 dbSNP
rs767730445 96 dbSNP
rs1264636204 112 dbSNP
rs1202409472 114 dbSNP
rs993038146 116 dbSNP
rs956061950 118 dbSNP
rs1166380710 124 dbSNP
rs992785824 133 dbSNP
rs745471727 142 dbSNP
rs917867064 147 dbSNP
rs949311427 151 dbSNP
rs1369178648 152 dbSNP
rs1234086283 154 dbSNP
rs949034289 158 dbSNP
rs1440733632 160 dbSNP
rs548361720 166 dbSNP
rs868534479 167 dbSNP
rs1471009022 168 dbSNP
rs143104448 172 dbSNP
rs1234769266 173 dbSNP
rs768883541 174 dbSNP
rs1409959648 180 dbSNP
rs755581652 180 dbSNP
rs941362091 182 dbSNP
rs1469517841 185 dbSNP
rs1464053737 186 dbSNP
rs1208923650 192 dbSNP
rs1037006204 194 dbSNP
rs1459622159 196 dbSNP
rs531116835 199 dbSNP
rs1466953413 203 dbSNP
rs1209030481 210 dbSNP
rs998253565 217 dbSNP
rs1309519541 223 dbSNP
rs550967301 225 dbSNP
rs1003918194 226 dbSNP
rs1320983950 227 dbSNP
rs1285332994 231 dbSNP
rs1434894081 233 dbSNP
rs774917088 236 dbSNP
rs1454615653 244 dbSNP
rs1040743552 251 dbSNP
rs1336300740 269 dbSNP
rs1458023372 269 dbSNP
rs900800660 279 dbSNP
rs1030204330 284 dbSNP
rs890277474 292 dbSNP
rs370162310 297 dbSNP
rs997120829 301 dbSNP
rs1185397902 306 dbSNP
rs1442227146 311 dbSNP
rs1242063663 313 dbSNP
rs1188644293 317 dbSNP
rs1007359276 321 dbSNP
rs768111886 328 dbSNP
rs1017941188 332 dbSNP
rs1258605251 337 dbSNP
rs570842662 339 dbSNP
rs1214040580 341 dbSNP
rs1156850217 343 dbSNP
rs1028544539 344 dbSNP
rs1000349319 346 dbSNP
rs1291186871 346 dbSNP
rs969318686 346 dbSNP
rs773748390 347 dbSNP
rs1032210060 351 dbSNP
rs1457859924 357 dbSNP
rs1161624109 358 dbSNP
rs1392609549 360 dbSNP
rs1440628256 363 dbSNP
rs1175915364 371 dbSNP
rs1287379064 374 dbSNP
rs1370202574 376 dbSNP
rs1350313064 379 dbSNP
rs1390104410 383 dbSNP
rs1422598790 386 dbSNP
rs1384546531 393 dbSNP
rs968581444 394 dbSNP
rs1168615672 396 dbSNP
rs1306953429 401 dbSNP
rs956116159 403 dbSNP
rs1327812611 410 dbSNP
rs539437467 413 dbSNP
rs992838203 414 dbSNP
rs1269594018 417 dbSNP
rs1031282535 424 dbSNP
rs1485737516 427 dbSNP
rs1332308389 437 dbSNP
rs761126834 445 dbSNP
rs187268980 465 dbSNP
rs1357865681 468 dbSNP
rs547100974 480 dbSNP
rs1229195329 483 dbSNP
rs1309392744 485 dbSNP
rs970006917 492 dbSNP
rs1293688443 502 dbSNP
rs1175366999 503 dbSNP
rs981127158 507 dbSNP
rs1368580013 513 dbSNP
rs1472943728 516 dbSNP
rs1184525874 523 dbSNP
rs916974708 524 dbSNP
rs766811374 529 dbSNP
rs1402895538 530 dbSNP
rs948904816 532 dbSNP
rs926543008 533 dbSNP
rs1244166055 535 dbSNP
rs1364840303 542 dbSNP
rs980272611 549 dbSNP
rs931178951 552 dbSNP
rs1415941948 566 dbSNP
rs1370897635 573 dbSNP
rs1404930005 577 dbSNP
rs910149838 580 dbSNP
rs941581175 584 dbSNP
rs1169301245 589 dbSNP
rs1037058833 599 dbSNP
rs1433339293 605 dbSNP
rs1431008668 614 dbSNP
rs1201997720 623 dbSNP
rs1489974100 629 dbSNP
rs1196945286 630 dbSNP
rs1268775910 630 dbSNP
rs1048216099 638 dbSNP
rs1481657362 638 dbSNP
rs1165758882 640 dbSNP
rs1203931135 640 dbSNP
rs1285462848 648 dbSNP
rs1351944863 651 dbSNP
rs1344693699 661 dbSNP
rs918588850 676 dbSNP
rs1288891790 680 dbSNP
rs777159091 694 dbSNP
rs759261685 703 dbSNP
rs1297048533 704 dbSNP
rs564904186 706 dbSNP
rs939757207 707 dbSNP
rs1040794560 709 dbSNP
rs900854258 713 dbSNP
rs10849029 724 dbSNP
rs1409899081 725 dbSNP
rs114807534 749 dbSNP
rs1421338454 752 dbSNP
rs1353033340 755 dbSNP
rs1007822384 764 dbSNP
rs904768822 767 dbSNP
rs117673615 770 dbSNP
rs1265208206 774 dbSNP
rs1202070792 778 dbSNP
rs1031807737 783 dbSNP
rs1261023932 784 dbSNP
rs190921478 798 dbSNP
rs537367441 799 dbSNP
rs1306255885 801 dbSNP
rs1202238013 804 dbSNP
rs1384439315 808 dbSNP
rs1024331557 819 dbSNP
rs1388940367 824 dbSNP
rs1273827050 827 dbSNP
rs1455702387 828 dbSNP
rs865918702 834 dbSNP
rs1362533729 838 dbSNP
rs1031336431 839 dbSNP
rs1483376447 843 dbSNP
rs1207229669 844 dbSNP
rs556959568 850 dbSNP
rs1245110411 864 dbSNP
rs576799368 866 dbSNP
rs1013884217 870 dbSNP
rs1472528342 873 dbSNP
rs1262718859 877 dbSNP
rs1489407674 878 dbSNP
rs980125028 880 dbSNP
rs1260064733 887 dbSNP
rs1034047414 891 dbSNP
rs1361509498 891 dbSNP
rs1312210421 898 dbSNP
rs1427076693 901 dbSNP
rs1024494773 903 dbSNP
rs1168419796 911 dbSNP
rs1451310281 920 dbSNP
rs758481533 928 dbSNP
rs952669906 935 dbSNP
rs980707203 942 dbSNP
rs1384252704 949 dbSNP
rs1383331050 958 dbSNP
rs1371698796 960 dbSNP
rs545476314 961 dbSNP
rs1158489056 962 dbSNP
rs764116163 963 dbSNP
rs1387644279 964 dbSNP
rs1161695339 976 dbSNP
rs751471970 989 dbSNP
rs962994685 990 dbSNP
rs908395826 993 dbSNP
rs972972351 994 dbSNP
rs1446676024 999 dbSNP
rs1284398509 1006 dbSNP
rs1445066266 1018 dbSNP
rs1222972428 1024 dbSNP
rs1490806835 1032 dbSNP
rs1217599644 1036 dbSNP
rs918807932 1037 dbSNP
rs1380979765 1050 dbSNP
rs757205891 1053 dbSNP
rs1212577706 1054 dbSNP
rs1224870819 1055 dbSNP
rs1051079628 1057 dbSNP
rs1405954194 1058 dbSNP
rs1367955640 1063 dbSNP
rs3217922 1067 dbSNP
rs373098535 1070 dbSNP
rs1169732238 1072 dbSNP
rs1342617023 1079 dbSNP
rs911307621 1084 dbSNP
rs1474516860 1085 dbSNP
rs942785561 1087 dbSNP
rs1038864543 1092 dbSNP
rs1481319449 1093 dbSNP
rs1278134264 1097 dbSNP
rs780910327 1098 dbSNP
rs745669333 1103 dbSNP
rs1049395747 1104 dbSNP
rs1193582648 1109 dbSNP
rs1210964192 1115 dbSNP
rs1338286141 1116 dbSNP
rs1239427473 1125 dbSNP
rs148214337 1135 dbSNP
rs1052971704 1137 dbSNP
rs891688921 1138 dbSNP
rs1271573849 1139 dbSNP
rs1355639455 1141 dbSNP
rs1330921298 1148 dbSNP
rs1408310600 1151 dbSNP
rs1399798581 1153 dbSNP
rs1014351679 1169 dbSNP
rs1391096452 1211 dbSNP
rs1023962044 1229 dbSNP
rs776793651 1243 dbSNP
rs970237431 1248 dbSNP
rs1172258644 1252 dbSNP
rs779747661 1252 dbSNP
rs1234549443 1257 dbSNP
rs551992768 1257 dbSNP
rs1178993225 1259 dbSNP
rs1436759368 1271 dbSNP
rs1413409824 1285 dbSNP
rs1263364026 1287 dbSNP
rs1053276319 1295 dbSNP
rs572609891 1300 dbSNP
rs1334312528 1302 dbSNP
rs1261600284 1304 dbSNP
rs541474169 1315 dbSNP
rs1017148445 1328 dbSNP
rs1024384016 1344 dbSNP
rs1440088299 1344 dbSNP
rs962878570 1344 dbSNP
rs1376325467 1345 dbSNP
rs140621197 1345 dbSNP
rs1491466972 1345 dbSNP
rs34524099 1345 dbSNP
rs56044137 1345 dbSNP
rs56048189 1345 dbSNP
rs75211979 1345 dbSNP
rs764554330 1345 dbSNP
rs879108849 1345 dbSNP
rs1001991494 1346 dbSNP
rs1319510158 1348 dbSNP
rs1184920533 1355 dbSNP
rs1027660527 1356 dbSNP
rs1491054068 1357 dbSNP
rs952120866 1357 dbSNP
rs1230401041 1358 dbSNP
rs200860740 1358 dbSNP
rs1286939073 1359 dbSNP
rs1272971060 1361 dbSNP
rs200982928 1362 dbSNP
rs1315748586 1363 dbSNP
rs748546940 1364 dbSNP
rs1219873860 1365 dbSNP
rs35155154 1366 dbSNP
rs34997979 1369 dbSNP
rs1380801128 1371 dbSNP
rs141278429 1376 dbSNP
rs1315202485 1377 dbSNP
rs1415169853 1377 dbSNP
rs1346821231 1382 dbSNP
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rs987233527 1396 dbSNP
rs1404577735 1397 dbSNP
rs1442283067 1405 dbSNP
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rs564604964 1432 dbSNP
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rs1312277096 1451 dbSNP
rs796323227 1452 dbSNP
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rs1246628662 1457 dbSNP
rs1364371851 1459 dbSNP
rs772219810 1464 dbSNP
rs878966229 1464 dbSNP
rs922377823 1466 dbSNP
rs1478612140 1480 dbSNP
rs1211283531 1481 dbSNP
rs1426616288 1482 dbSNP
rs1455209990 1483 dbSNP
rs1170537449 1487 dbSNP
rs1157931615 1489 dbSNP
rs1429865465 1491 dbSNP
rs932426619 1495 dbSNP
rs985574304 1497 dbSNP
rs1477720343 1499 dbSNP
rs1437003686 1501 dbSNP
rs915706106 1503 dbSNP
rs1487795998 1509 dbSNP
rs1264885156 1511 dbSNP
rs1205342769 1523 dbSNP
rs1309448076 1533 dbSNP
rs1293755515 1534 dbSNP
rs925659025 1538 dbSNP
rs533412412 1551 dbSNP
rs935635932 1555 dbSNP
rs1321408303 1557 dbSNP
rs1330312651 1558 dbSNP
rs1402951222 1573 dbSNP
rs911205513 1589 dbSNP
rs1053324368 1595 dbSNP
rs1437021732 1600 dbSNP
rs150151031 1607 dbSNP
rs950253143 1623 dbSNP
rs546669155 1624 dbSNP
rs1169578010 1639 dbSNP
rs1465419305 1641 dbSNP
rs1327101048 1646 dbSNP
rs1202063112 1647 dbSNP
rs1431898914 1649 dbSNP
rs942815958 1654 dbSNP
rs3217923 1655 dbSNP
rs1268964559 1663 dbSNP
rs1256386087 1666 dbSNP
rs1331569867 1671 dbSNP
rs1212074116 1674 dbSNP
rs1289531793 1675 dbSNP
rs1324540157 1676 dbSNP
rs1392600416 1676 dbSNP
rs34569142 1676 dbSNP
rs34609911 1676 dbSNP
rs535974661 1676 dbSNP
rs66494535 1676 dbSNP
rs77471844 1677 dbSNP
rs1370610303 1678 dbSNP
rs1201585684 1679 dbSNP
rs905989725 1681 dbSNP
rs1407876395 1687 dbSNP
rs1178987407 1688 dbSNP
rs1001647348 1691 dbSNP
rs1377538312 1691 dbSNP
rs199786641 1692 dbSNP
rs1180912845 1693 dbSNP
rs1301197079 1694 dbSNP
rs1458435870 1695 dbSNP
rs1161098346 1697 dbSNP
rs4466913 1702 dbSNP
rs1389696829 1704 dbSNP
rs1461901823 1705 dbSNP
rs1245230312 1708 dbSNP
rs1405760504 1719 dbSNP
rs549464068 1724 dbSNP
rs1348595946 1729 dbSNP
rs1409278001 1730 dbSNP
rs749583873 1731 dbSNP
rs887815042 1740 dbSNP
rs1307837767 1750 dbSNP
rs1246118041 1751 dbSNP
rs1334347483 1752 dbSNP
rs1042797777 1794 dbSNP
rs768182587 1798 dbSNP
rs1402031106 1817 dbSNP
rs1004866874 1820 dbSNP
rs1455750843 1828 dbSNP
rs1379022407 1841 dbSNP
rs1158078898 1842 dbSNP
rs1352418800 1850 dbSNP
rs935857546 1851 dbSNP
rs182684983 1853 dbSNP
rs891738472 1854 dbSNP
rs949980308 1857 dbSNP
rs1045848931 1867 dbSNP
rs905519903 1872 dbSNP
rs567544553 1873 dbSNP
rs1206697238 1874 dbSNP
rs1029499719 1885 dbSNP
rs1483049030 1890 dbSNP
rs1246043603 1891 dbSNP
rs1361053559 1902 dbSNP
rs868307883 1902 dbSNP
rs147082841 1904 dbSNP
rs1473303650 1907 dbSNP
rs1343282901 1908 dbSNP
rs1359148360 1908 dbSNP
rs1402273263 1908 dbSNP
rs953989031 1909 dbSNP
rs536822360 1911 dbSNP
rs985238683 1912 dbSNP
rs557266635 1913 dbSNP
rs1472983429 1919 dbSNP
rs1373889707 1920 dbSNP
rs201420580 1920 dbSNP
rs1491138138 1926 dbSNP
rs1491381658 1926 dbSNP
rs375128557 1926 dbSNP
rs1368491617 1927 dbSNP
rs1428959767 1928 dbSNP
rs1308594661 1934 dbSNP
rs1372435346 1935 dbSNP
rs1223224944 1936 dbSNP
rs1449937240 1936 dbSNP
rs551472296 1936 dbSNP
rs957099915 1936 dbSNP
rs1339608897 1938 dbSNP
rs1394416594 1942 dbSNP
rs988429256 1948 dbSNP
rs1312244058 1949 dbSNP
rs1341367243 1950 dbSNP
rs1247426790 1952 dbSNP
rs1295783469 1954 dbSNP
rs1341904235 1955 dbSNP
rs1338981798 1961 dbSNP
rs1278116857 1972 dbSNP
rs570644439 1973 dbSNP
rs539676160 1975 dbSNP
rs1404881668 1980 dbSNP
rs1277421874 1990 dbSNP
rs1173167989 1998 dbSNP
rs1463867466 2010 dbSNP
rs898224804 2022 dbSNP
rs1199902236 2023 dbSNP
rs1198268052 2026 dbSNP
rs1244939732 2029 dbSNP
rs529993175 2035 dbSNP
rs572480733 2062 dbSNP
rs955836632 2064 dbSNP
rs1189199808 2067 dbSNP
rs1196445511 2075 dbSNP
rs759965835 2078 dbSNP
rs74786417 2083 dbSNP
rs370634757 2088 dbSNP
rs1018723361 2090 dbSNP
rs1448669381 2091 dbSNP
rs1224545056 2094 dbSNP
rs1347719814 2100 dbSNP
rs964082308 2121 dbSNP
rs1273635213 2129 dbSNP
rs979380061 2144 dbSNP
rs1391994892 2148 dbSNP
rs139789164 2150 dbSNP
rs555029990 2151 dbSNP
rs1049171309 2152 dbSNP
rs887854769 2157 dbSNP
rs575824923 2158 dbSNP
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rs35604856 2169 dbSNP
rs1036369572 2176 dbSNP
rs901804663 2188 dbSNP
rs1244076205 2190 dbSNP
rs185406911 2191 dbSNP
rs913062831 2206 dbSNP
rs190269104 2207 dbSNP
rs1029963493 2222 dbSNP
rs780931238 2228 dbSNP
rs1230415479 2236 dbSNP
rs1045658197 2250 dbSNP
rs1254840907 2257 dbSNP
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rs533467026 2276 dbSNP
rs1238102450 2282 dbSNP
rs1205124599 2283 dbSNP
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rs1038012810 2302 dbSNP
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rs898275850 2321 dbSNP
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rs770240504 2886 dbSNP
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rs989181679 3848 dbSNP
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rs1222197633 3874 dbSNP
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rs1199140095 4955 dbSNP
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rs768453034 4959 dbSNP
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rs1323730253 4981 dbSNP
rs1168395629 4985 dbSNP
rs1395915803 4986 dbSNP
rs1409517446 4986 dbSNP
rs1195660336 4991 dbSNP
rs1249601323 4992 dbSNP
rs1452831009 4992 dbSNP
rs200404720 4992 dbSNP
rs61152953 4992 dbSNP
rs796548117 4992 dbSNP
rs1205180700 4995 dbSNP
rs932502413 4996 dbSNP
rs1347882316 5001 dbSNP
rs1281855478 5003 dbSNP
rs1485434760 5004 dbSNP
rs1279839360 5005 dbSNP
rs1346746797 5006 dbSNP
rs950451953 5009 dbSNP
rs987600465 5012 dbSNP
rs1431509489 5014 dbSNP
rs1049519505 5016 dbSNP
rs1297034284 5018 dbSNP
rs3217934 5037 dbSNP
rs1376086586 5038 dbSNP
rs141438670 5039 dbSNP
rs1433057904 5039 dbSNP
rs943014977 5043 dbSNP
rs773302971 5053 dbSNP
rs189733699 5062 dbSNP
rs3210008 5066 dbSNP
rs1430085067 5069 dbSNP
rs1248153157 5072 dbSNP
rs1481501341 5074 dbSNP
rs560483986 5076 dbSNP
rs1388301366 5079 dbSNP
rs1049651 5098 dbSNP
rs902186334 5105 dbSNP
rs1208162405 5108 dbSNP
rs1346679050 5125 dbSNP
rs1003584083 5126 dbSNP
rs1291111110 5128 dbSNP
rs567890322 5129 dbSNP
rs536822575 5131 dbSNP
rs182399319 5132 dbSNP
rs1305328532 5146 dbSNP
rs185544647 5150 dbSNP
rs1034785361 5151 dbSNP
rs1042541445 5154 dbSNP
rs1389289379 5160 dbSNP
rs1413074386 5162 dbSNP
rs760549484 5164 dbSNP
rs1282017429 5173 dbSNP
rs1455549223 5174 dbSNP
rs1361795947 5185 dbSNP
rs1012451122 5187 dbSNP
rs1158148183 5194 dbSNP
rs1475478302 5199 dbSNP
rs1345631265 5204 dbSNP
rs11549724 5224 dbSNP
rs1485097839 5229 dbSNP
rs570323336 5237 dbSNP
rs1261823502 5244 dbSNP
rs1206470291 5246 dbSNP
rs1484702582 5248 dbSNP
rs1208547767 5249 dbSNP
rs1259298846 5249 dbSNP
rs1056938377 5252 dbSNP
rs538924803 5258 dbSNP
rs1295724541 5284 dbSNP
rs1231998312 5292 dbSNP
rs895172925 5299 dbSNP
rs952311601 5307 dbSNP
rs1384093579 5308 dbSNP
rs1022924146 5312 dbSNP
rs776528809 5316 dbSNP
rs1288050534 5332 dbSNP
rs766233402 5342 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 894.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uaggAGAUUUUUCUACGUGAAa 5'
              | | : ||  ||||||| 
Target 5' cagaUGUCGUAAUUUGCACUUa 3'
 		4 - 25
Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset GSM4903825
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID14_NS
Location of target site NM_001759 | 3UTR | AAACAUUUAUGCGGUAGGCUCAGAUGUCGUAAUUUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161237
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903826
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID21_NS
Location of target site NM_001759 | 3UTR | AUGCGGUAGGCUCAGAUGUCGUAAUUUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161237
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903828
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID21_9124
Location of target site NM_001759 | 3UTR | UUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161237
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001759 | 3UTR | GGAAAAAAUACAUUGAACCAAGGGAUCCUCCCUCCCCUUCAAGGCAGACGUUCAGUACAAACAUUUAUGCGGUAGGCUCAGAUGUCGUAAUUUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001759 | 3UTR | UCCCCUUCAAGGCAGACGUUCAGUACAAACAUUUAUGCGGUAGGCUCAGAUGUCGUAAUUUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001759 | 3UTR | AAAUACAUUGAACCAAGGGAUCCUCCCUCCCCUUCAAGGCAGACGUUCAGUACAAACAUUUAUGCGGUAGGCUCAGAUGUCGUAAUUUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_001759 | 3UTR | UUGAACCAAGGGAUCCUCCCUCCCCUUCAAGGCAGACGUUCAGUACAAACAUUUAUGCGGUAGGCUCAGAUGUCGUAAUUUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_001759 | 3UTR | GAACCAAGGGAUCCUCCCUCCCCUUCAAGGCAGACGUUCAGUACAAACAUUUAUGCGGUAGGCUCAGAUGUCGUAAUUUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_001759 | 3UTR | CUCAUCAUGAUGGAAAAAAUACAUUGAACCAAGGGAUCCUCCCUCCCCUUCAAGGCAGACGUUCAGUACAAACAUUUAUGCGGUAGGCUCAGAUGUCGUAAUUUGCACUUAGGUACCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000261254.3 | 3UTR | GCUCAGAUGUCGUAAUUUGCACUUAGGUACCAGGUGUCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla 0.873 4.9e-5 0.835 1.9e-4 13 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.473 8.5e-3 0.123 2.8e-1 25 Click to see details
GSE19350 CNS germ cell tumors 0.52 4.2e-2 0.624 1.5e-2 12 Click to see details
GSE32688 Pancreatic cancer 0.302 4.6e-2 0.136 2.3e-1 32 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.334 7.5e-2 0.502 1.2e-2 20 Click to see details
GSE27834 Pluripotent stem cells 0.317 1.2e-1 0.268 1.6e-1 16 Click to see details
GSE17498 Multiple myeloma 0.144 1.9e-1 0.194 1.2e-1 40 Click to see details
GSE14794 Lymphoblastoid cells 0.087 2.1e-1 0.029 3.9e-1 90 Click to see details
GSE21687 Ependynoma primary tumors -0.093 2.3e-1 -0.091 2.4e-1 64 Click to see details
GSE38226 Liver fibrosis -0.16 2.4e-1 0.287 1.0e-1 21 Click to see details
GSE17306 Multiple myeloma -0.096 2.6e-1 0.460 4.4e-4 49 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.253 2.7e-1 0.310 2.3e-1 8 Click to see details
GSE26953 Aortic valvular endothelial cells -0.12 2.9e-1 -0.189 1.9e-1 24 Click to see details
GSE21849 B cell lymphoma -0.106 2.9e-1 0.102 3.0e-1 29 Click to see details
GSE42095 Differentiated embryonic stem cells -0.111 3.1e-1 0.164 2.3e-1 23 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.059 3.9e-1 0.416 1.9e-2 25 Click to see details
GSE28544 Breast cancer 0.054 4.0e-1 0.101 3.2e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC 0.738 0.24 1.000 0.5 3 Click to see details
LIHC -0.483 0.26 -0.400 0.3 4 Click to see details
BRCA -0.156 0.4 0.000 0.5 5 Click to see details
BRCA -0.156 0.4 0.000 0.5 5 Click to see details
BRCA -0.156 0.4 0.000 0.5 5 Click to see details
BRCA -0.156 0.4 0.000 0.5 5 Click to see details
325 hsa-miR-519c-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000496 HIF1A hypoxia inducible factor 1 alpha subunit 4 1
MIRT000998 ABCG2 ATP binding cassette subfamily G member 2 (Junior blood group) 4 3
MIRT003732 ELAVL1 ELAV like RNA binding protein 1 3 1
MIRT006639 TIMP2 TIMP metallopeptidase inhibitor 2 3 1
MIRT006640 PTEN phosphatase and tensin homolog 3 1
MIRT006641 CDKN1A cyclin dependent kinase inhibitor 1A 3 1
MIRT055028 TPRG1L tumor protein p63 regulated 1 like 2 2
MIRT055393 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 6
MIRT056828 REEP3 receptor accessory protein 3 2 2
MIRT060504 PPP6R3 protein phosphatase 6 regulatory subunit 3 2 2
MIRT061796 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 10
MIRT063354 ETNK1 ethanolamine kinase 1 2 2
MIRT064424 ARID4B AT-rich interaction domain 4B 2 2
MIRT064719 CCND2 cyclin D2 2 2
MIRT064805 ZBTB18 zinc finger and BTB domain containing 18 2 4
MIRT065609 DAZAP2 DAZ associated protein 2 2 10
MIRT065622 CLIC4 chloride intracellular channel 4 2 4
MIRT065872 GDF11 growth differentiation factor 11 2 2
MIRT065892 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT068751 RB1 RB transcriptional corepressor 1 2 2
MIRT070050 FANCM Fanconi anemia complementation group M 2 2
MIRT071004 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT071334 CMPK1 cytidine/uridine monophosphate kinase 1 2 6
MIRT071912 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT072732 GLCE glucuronic acid epimerase 2 2
MIRT076028 COX10 COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor 2 6
MIRT076046 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT079353 CCDC137 coiled-coil domain containing 137 2 2
MIRT080227 SMAD4 SMAD family member 4 2 6
MIRT081122 LDLR low density lipoprotein receptor 2 8
MIRT081205 MIDN midnolin 2 10
MIRT085098 IFNAR2 interferon alpha and beta receptor subunit 2 2 6
MIRT085149 SLC5A3 solute carrier family 5 member 3 2 4
MIRT086436 NABP1 nucleic acid binding protein 1 2 6
MIRT088037 UBXN2A UBX domain protein 2A 2 2
MIRT088132 SEPT2 septin 2 2 4
MIRT088343 MAPRE3 microtubule associated protein RP/EB family member 3 2 8
MIRT090645 U2SURP U2 snRNP associated SURP domain containing 2 6
MIRT090805 MBNL1 muscleblind like splicing regulator 1 2 4
MIRT091692 TGFBR2 transforming growth factor beta receptor 2 2 4
MIRT092689 C3ORF38 chromosome 3 open reading frame 38 2 8
MIRT093954 SLAIN2 SLAIN motif family member 2 2 2
MIRT095727 ANKH ANKH inorganic pyrophosphate transport regulator 2 8
MIRT097158 FCHO2 FCH domain only 2 2 2
MIRT099319 QKI QKI, KH domain containing RNA binding 2 4
MIRT099835 SOX4 SRY-box 4 2 10
MIRT100773 ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative) 2 2
MIRT100955 CENPQ centromere protein Q 2 4
MIRT102229 HBP1 HMG-box transcription factor 1 2 2
MIRT102299 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT102621 UBN2 ubinuclein 2 2 8
MIRT103780 PURB purine rich element binding protein B 2 2
MIRT104168 PHTF2 putative homeodomain transcription factor 2 2 6
MIRT107279 FAM73B mitoguardin 2 2 2
MIRT107945 TMEM2 transmembrane protein 2 2 2
MIRT108265 HABP4 hyaluronan binding protein 4 2 2
MIRT124812 BICD2 BICD cargo adaptor 2 2 2
MIRT138707 MPP5 membrane palmitoylated protein 5 2 2
MIRT139880 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT144312 NFAT5 nuclear factor of activated T-cells 5 2 8
MIRT145605 LASP1 LIM and SH3 protein 1 2 2
MIRT153350 MAVS mitochondrial antiviral signaling protein 2 4
MIRT153986 PRNP prion protein 2 2
MIRT159129 NRBP1 nuclear receptor binding protein 1 2 2
MIRT164533 MSMO1 methylsterol monooxygenase 1 2 2
MIRT165912 CREBRF CREB3 regulatory factor 2 2
MIRT170858 TAX1BP1 Tax1 binding protein 1 2 4
MIRT172157 FZD6 frizzled class receptor 6 2 8
MIRT173701 PRPF4 pre-mRNA processing factor 4 2 2
MIRT175003 ZBTB5 zinc finger and BTB domain containing 5 2 4
MIRT175400 ACSL4 acyl-CoA synthetase long chain family member 4 2 2
MIRT178069 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT178675 FAM102B family with sequence similarity 102 member B 2 2
MIRT180847 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 4
MIRT194911 RBBP6 RB binding protein 6, ubiquitin ligase 2 8
MIRT195755 ATMIN ATM interactor 2 6
MIRT196623 TAOK1 TAO kinase 1 2 6
MIRT205286 STK11IP serine/threonine kinase 11 interacting protein 2 2
MIRT206051 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT206198 RAB10 RAB10, member RAS oncogene family 2 4
MIRT208980 SKIL SKI like proto-oncogene 2 10
MIRT223637 ATP6V1C1 ATPase H+ transporting V1 subunit C1 2 4
MIRT224757 DPYSL2 dihydropyrimidinase like 2 2 2
MIRT227995 NFIB nuclear factor I B 2 4
MIRT230973 PRRG4 proline rich and Gla domain 4 2 2
MIRT238183 ANKRD33B ankyrin repeat domain 33B 2 10
MIRT242425 HAS3 hyaluronan synthase 3 2 2
MIRT242666 SALL3 spalt like transcription factor 3 2 4
MIRT242765 FNBP1L formin binding protein 1 like 2 6
MIRT243095 LCLAT1 lysocardiolipin acyltransferase 1 2 4
MIRT243437 PAK2 p21 (RAC1) activated kinase 2 2 2
MIRT243964 MAP1B microtubule associated protein 1B 2 2
MIRT244776 RABGAP1 RAB GTPase activating protein 1 2 2
MIRT246630 TMEM109 transmembrane protein 109 2 2
MIRT246968 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT266055 FJX1 four jointed box 1 2 4
MIRT266858 SLC25A44 solute carrier family 25 member 44 2 2
MIRT283184 C16ORF52 chromosome 16 open reading frame 52 2 2
MIRT286955 SOCS7 suppressor of cytokine signaling 7 2 2
MIRT293651 PVR poliovirus receptor 2 4
MIRT295178 ZNF317 zinc finger protein 317 2 4
MIRT302453 CLIP4 CAP-Gly domain containing linker protein family member 4 2 2
MIRT303499 NAGK N-acetylglucosamine kinase 2 6
MIRT368755 CDADC1 cytidine and dCMP deaminase domain containing 1 2 2
MIRT383207 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT383610 POU2F1 POU class 2 homeobox 1 2 2
MIRT396102 CASP2 caspase 2 2 2
MIRT441419 FAM9C family with sequence similarity 9 member C 2 2
MIRT446818 C5orf30 chromosome 5 open reading frame 30 2 2
MIRT448307 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT461781 MPDU1 mannose-P-dolichol utilization defect 1 2 2
MIRT462816 NTN1 netrin 1 2 2
MIRT463613 ZBTB34 zinc finger and BTB domain containing 34 2 2
MIRT464560 UBTF upstream binding transcription factor, RNA polymerase I 2 2
MIRT464842 RPS27A ribosomal protein S27a 2 12
MIRT465225 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT466446 TFAM transcription factor A, mitochondrial 2 8
MIRT466836 STX6 syntaxin 6 2 6
MIRT467185 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT468179 SGMS1 sphingomyelin synthase 1 2 2
MIRT469850 PXK PX domain containing serine/threonine kinase like 2 8
MIRT471612 PAQR5 progestin and adipoQ receptor family member 5 2 19
MIRT472008 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT472159 NIN ninein 2 4
MIRT472336 NETO2 neuropilin and tolloid like 2 2 4
MIRT473162 MLLT1 MLLT1, super elongation complex subunit 2 2
MIRT473623 MARK2 microtubule affinity regulating kinase 2 2 2
MIRT473682 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT473805 MAP3K2 mitogen-activated protein kinase kinase kinase 2 2 2
MIRT474416 KLHL28 kelch like family member 28 2 8
MIRT474736 KIF13A kinesin family member 13A 2 6
MIRT474966 KCTD10 potassium channel tetramerization domain containing 10 2 4
MIRT475464 HSPA8 heat shock protein family A (Hsp70) member 8 2 6
MIRT476120 GPR157 G protein-coupled receptor 157 2 2
MIRT476203 GNS glucosamine (N-acetyl)-6-sulfatase 2 6
MIRT477180 F3 coagulation factor III, tissue factor 2 8
MIRT478103 DLG5 discs large MAGUK scaffold protein 5 2 6
MIRT478713 CSNK1A1 casein kinase 1 alpha 1 2 6
MIRT479055 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 8
MIRT480008 CAPRIN2 caprin family member 2 2 4
MIRT480519 C11orf30 EMSY, BRCA2 interacting transcriptional repressor 2 10
MIRT480822 BLCAP bladder cancer associated protein 2 10
MIRT480944 BBX BBX, HMG-box containing 2 8
MIRT481336 ATL3 atlastin GTPase 3 2 2
MIRT481598 ARHGAP1 Rho GTPase activating protein 1 2 6
MIRT481877 ANKRD50 ankyrin repeat domain 50 2 2
MIRT482471 ADAR adenosine deaminase, RNA specific 2 4
MIRT484875 ZNF652 zinc finger protein 652 2 2
MIRT485090 SLC30A1 solute carrier family 30 member 1 2 4
MIRT485579 FOXQ1 forkhead box Q1 2 2
MIRT485618 FBXL5 F-box and leucine rich repeat protein 5 2 10
MIRT486751 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT489599 ZDHHC20 zinc finger DHHC-type containing 20 2 10
MIRT489889 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT491654 PDRG1 p53 and DNA damage regulated 1 2 10
MIRT492038 TSG101 tumor susceptibility 101 2 4
MIRT492361 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT492776 PDGFB platelet derived growth factor subunit B 2 2
MIRT493336 LAPTM4A lysosomal protein transmembrane 4 alpha 2 12
MIRT493611 HMGB3 high mobility group box 3 2 6
MIRT497468 DDR2 discoidin domain receptor tyrosine kinase 2 2 2
MIRT498059 SNX5 sorting nexin 5 2 6
MIRT499901 KIAA1191 KIAA1191 2 4
MIRT500489 ZBTB4 zinc finger and BTB domain containing 4 2 6
MIRT500685 TRIM37 tripartite motif containing 37 2 2
MIRT500760 TMEM127 transmembrane protein 127 2 6
MIRT501456 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT501559 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT501983 MAPK1 mitogen-activated protein kinase 1 2 10
MIRT502000 MAP7 microtubule associated protein 7 2 8
MIRT502049 LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 2 6
MIRT502423 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT503044 CAMSAP2 calmodulin regulated spectrin associated protein family member 2 2 2
MIRT503821 TMEM242 transmembrane protein 242 2 4
MIRT504290 PARP1 poly(ADP-ribose) polymerase 1 2 6
MIRT504560 ZNF417 zinc finger protein 417 2 6
MIRT505054 ZNF202 zinc finger protein 202 2 6
MIRT505486 SRSF2 serine and arginine rich splicing factor 2 2 4
MIRT505836 POLR1B RNA polymerase I subunit B 2 4
MIRT506372 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT506451 NACC2 NACC family member 2 2 4
MIRT506673 LZIC leucine zipper and CTNNBIP1 domain containing 2 4
MIRT506834 KIF23 kinesin family member 23 2 4
MIRT506880 KIAA0101 PCNA clamp associated factor 2 6
MIRT507359 FAM129A family with sequence similarity 129 member A 2 6
MIRT507957 BNIP2 BCL2 interacting protein 2 2 6
MIRT509433 MCM7 minichromosome maintenance complex component 7 2 6
MIRT510872 RAN RAN, member RAS oncogene family 2 8
MIRT511078 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 2 4
MIRT511254 KLHL36 kelch like family member 36 2 6
MIRT513699 RBM20 RNA binding motif protein 20 2 4
MIRT513742 PKNOX1 PBX/knotted 1 homeobox 1 2 2
MIRT513981 CEP97 centrosomal protein 97 2 2
MIRT514092 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 6
MIRT515928 MFAP2 microfibril associated protein 2 2 4
MIRT519574 ZNFX1 zinc finger NFX1-type containing 1 2 4
MIRT521297 RRAGD Ras related GTP binding D 2 4
MIRT521348 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521693 PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 2 8
MIRT521778 PPIG peptidylprolyl isomerase G 2 8
MIRT522191 NR2C2 nuclear receptor subfamily 2 group C member 2 2 6
MIRT524696 BTG3 BTG anti-proliferation factor 3 2 8
MIRT525663 NHSL2 NHS like 2 2 2
MIRT527252 TMEM196 transmembrane protein 196 2 2
MIRT527466 CLEC12B C-type lectin domain family 12 member B 2 2
MIRT529535 ICMT isoprenylcysteine carboxyl methyltransferase 2 2
MIRT530146 HADHB hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 2 2
MIRT530851 RAG1 recombination activating 1 2 4
MIRT531109 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT534263 SLC12A7 solute carrier family 12 member 7 2 2
MIRT534756 RASGEF1A RasGEF domain family member 1A 2 2
MIRT535175 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT535246 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 4
MIRT535401 PER1 period circadian clock 1 2 2
MIRT536036 MCUR1 mitochondrial calcium uniporter regulator 1 2 2
MIRT536347 LEFTY1 left-right determination factor 1 2 2
MIRT536413 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT536437 KMT2B lysine methyltransferase 2B 2 6
MIRT536604 IRF2 interferon regulatory factor 2 2 2
MIRT536642 INO80D INO80 complex subunit D 2 2
MIRT536860 HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 2 2
MIRT537241 GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 2 2
MIRT537728 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT537988 DPP8 dipeptidyl peptidase 8 2 2
MIRT538037 DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 2 2
MIRT538255 CUL3 cullin 3 2 4
MIRT538525 CLCN3 chloride voltage-gated channel 3 2 2
MIRT538659 CCSAP centriole, cilia and spindle associated protein 2 2
MIRT538779 C7orf60 base methyltransferase of 25S rRNA 2 homolog 2 4
MIRT538849 BTG1 BTG anti-proliferation factor 1 2 2
MIRT538923 BRI3BP BRI3 binding protein 2 6
MIRT539114 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT539454 ADARB2 adenosine deaminase, RNA specific B2 (inactive) 2 2
MIRT541085 RLIM ring finger protein, LIM domain interacting 2 2
MIRT543117 SKA2 spindle and kinetochore associated complex subunit 2 2 2
MIRT543181 FICD FIC domain containing 2 2
MIRT543575 RPF2 ribosome production factor 2 homolog 2 4
MIRT544113 IPMK inositol polyphosphate multikinase 2 2
MIRT544625 CSDE1 cold shock domain containing E1 2 2
MIRT544699 ZNF224 zinc finger protein 224 2 4
MIRT544992 MFF mitochondrial fission factor 2 4
MIRT546248 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT546282 TMEM30A transmembrane protein 30A 2 4
MIRT546290 TMEM200C transmembrane protein 200C 2 4
MIRT546558 SATB2 SATB homeobox 2 2 2
MIRT546815 RAP2C RAP2C, member of RAS oncogene family 2 2
MIRT547046 POGZ pogo transposable element derived with ZNF domain 2 2
MIRT547474 MBNL3 muscleblind like splicing regulator 3 2 4
MIRT547761 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT547892 HSPA13 heat shock protein family A (Hsp70) member 13 2 2
MIRT548315 EPHA4 EPH receptor A4 2 2
MIRT548383 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT548460 EGLN3 egl-9 family hypoxia inducible factor 3 2 2
MIRT548579 DNAJB14 DnaJ heat shock protein family (Hsp40) member B14 2 2
MIRT548858 CERCAM cerebral endothelial cell adhesion molecule 2 2
MIRT548896 CHEK2 checkpoint kinase 2 2 4
MIRT549319 ARHGAP12 Rho GTPase activating protein 12 2 4
MIRT550302 ZNF681 zinc finger protein 681 2 2
MIRT551120 ZNF107 zinc finger protein 107 2 2
MIRT551406 DCTPP1 dCTP pyrophosphatase 1 2 2
MIRT552173 DAD1 defender against cell death 1 2 2
MIRT552856 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT552892 WASL Wiskott-Aldrich syndrome like 2 4
MIRT553075 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT553668 TFAP4 transcription factor AP-4 2 4
MIRT553700 TCF7L2 transcription factor 7 like 2 2 2
MIRT554608 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT554860 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT556157 MECP2 methyl-CpG binding protein 2 2 2
MIRT556179 MCC mutated in colorectal cancers 2 2
MIRT556529 LIN52 lin-52 DREAM MuvB core complex component 2 2
MIRT556723 KLHL21 kelch like family member 21 2 4
MIRT557054 HOXB3 homeobox B3 2 2
MIRT557587 GNPTAB N-acetylglucosamine-1-phosphate transferase alpha and beta subunits 2 2
MIRT557661 GATA6 GATA binding protein 6 2 2
MIRT557753 FRS2 fibroblast growth factor receptor substrate 2 2 2
MIRT557881 FEM1B fem-1 homolog B 2 4
MIRT558215 EFCAB14 EF-hand calcium binding domain 14 2 4
MIRT558264 DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 2 2
MIRT558327 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558766 CFL2 cofilin 2 2 2
MIRT561037 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT561324 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT561641 RUNX3 runt related transcription factor 3 2 2
MIRT562555 CCDC71L coiled-coil domain containing 71 like 2 4
MIRT562961 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT564680 ZNF35 zinc finger protein 35 2 2
MIRT565694 SESN3 sestrin 3 2 2
MIRT565910 SCAMP2 secretory carrier membrane protein 2 2 2
MIRT566141 RACGAP1 Rac GTPase activating protein 1 2 2
MIRT567047 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT567076 KBTBD2 kelch repeat and BTB domain containing 2 2 2
MIRT567539 FGFR1OP FGFR1 oncogene partner 2 2
MIRT567624 FAM210A family with sequence similarity 210 member A 2 2
MIRT570321 ZNF70 zinc finger protein 70 2 2
MIRT571759 PSD3 pleckstrin and Sec7 domain containing 3 2 2
MIRT571857 NKIRAS1 NFKB inhibitor interacting Ras like 1 2 2
MIRT573372 LIMA1 LIM domain and actin binding 1 2 2
MIRT574561 NR2F2 nuclear receptor subfamily 2 group F member 2 2 2
MIRT614729 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT617877 ESR1 estrogen receptor 1 2 2
MIRT624421 CBX8 chromobox 8 2 2
MIRT625865 SLC35C2 solute carrier family 35 member C2 2 2
MIRT630703 DICER1 dicer 1, ribonuclease III 2 4
MIRT632514 PTPN9 protein tyrosine phosphatase, non-receptor type 9 2 2
MIRT641797 USP32 ubiquitin specific peptidase 32 2 2
MIRT663625 SEC23B Sec23 homolog B, coat complex II component 2 2
MIRT680135 ADRBK2 G protein-coupled receptor kinase 3 2 2
MIRT702388 KLF10 Kruppel like factor 10 2 2
MIRT707830 TMEM133 transmembrane protein 133 2 2
MIRT708885 MOCS2 molybdenum cofactor synthesis 2 2 2
MIRT709122 C3orf18 chromosome 3 open reading frame 18 2 2
MIRT709635 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT710596 CDCA4 cell division cycle associated 4 2 2
MIRT710802 IFNLR1 interferon lambda receptor 1 2 2
MIRT711782 RFXAP regulatory factor X associated protein 2 2
MIRT713344 KLRD1 killer cell lectin like receptor D1 2 2
MIRT713640 MED8 mediator complex subunit 8 2 2
MIRT713916 IGF2R insulin like growth factor 2 receptor 2 2
MIRT715068 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT715206 FKTN fukutin 2 2
MIRT717819 FAM114A1 family with sequence similarity 114 member A1 2 2
MIRT720543 CHERP calcium homeostasis endoplasmic reticulum protein 2 2
MIRT720636 ELF5 E74 like ETS transcription factor 5 2 2
MIRT721703 ISY1 ISY1 splicing factor homolog 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-519c Bilobalide NULL 73581 Quantitative real-time PCR Human breast cancer MCF-7 cells 21796641 2011 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-519c Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-519c-3p Mitoxantrone 4212 NSC279836 approved sensitive Low Breast Cancer cell line (MCF-7)
hsa-miR-519c-3p Cisplatin 5460033 NSC119875 approved resistant High Germ Cell Tumor cell line (NTERA-2)
hsa-miR-519c-3p Vinorelbine 44424639 approved resistant High Non-Small Cell Lung Cancer cell line (H358, H1993)
hsa-miR-519c-3p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-519c-3p Gemcitabine 60750 NSC613327 approved sensitive Low Pancreatic Cancer cell line (MIA-PaCa-2)
hsa-miR-519c-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-519c-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-519c-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-519c-3p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-519c-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-519c-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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