miRTarBase - #MIRT066181


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pre-miRNA Information
pre-miRNA hsa-mir-5590   
Genomic Coordinates chr2: 134857820 - 134857873
Description Homo sapiens miR-5590 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-5590-5p
Sequence 1| UUGCCAUACAUAGACUUUAUU |21
Evidence Not_experimental
Experiments
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs553031425 1 dbSNP
rs1255264134 4 dbSNP
rs1205476379 9 dbSNP
rs1387316331 10 dbSNP
rs1031241138 11 dbSNP
rs1465409255 12 dbSNP
rs1227248415 18 dbSNP
rs1334861447 19 dbSNP
Putative Targets

Gene Information
Gene Symbol PIP4K2C   
Synonyms PIP5K2C
Description phosphatidylinositol-5-phosphate 4-kinase type 2 gamma
Transcript NM_001146259   
Other Transcripts NM_001146258 , NM_001146260 , NM_024779   
Expression
Putative miRNA Targets on PIP4K2C
3'UTR of PIP4K2C
(miRNA target sites are highlighted)		 
>PIP4K2C|NM_001146259|3'UTR
   1 GAGACTGCCTGGTTCTCTCTGATGTTCAAGGTGGTGGGGTTCTGAGACACTTGGGGGAATTGTGGGGATATTCTAGCCAC
  81 CAGTTCTCTTCTTCCTTTGCTAAATTCAGGCTGCAGGCTCCTTCCATCCAGATAACTCCATCCTGTCGAGTAGGCTCTTT
 161 CTGACCCTCAGAAATACATTGTCCTTTTTCCTCTTTGCCCATTTTTCTTCCCTCTCTTCCTCCCCATGAGAAGTCTGCTT
 241 GTAGTATTAGAATGTTATTGTTGACTCTCTCCCAAGTGCCTTGATCTTTGTAATATCTCCTGTTGTTTCTATGATATAGG
 321 AGCTAGGGGAAGGGGGTTGTTTGCCTTCTTCAGGACCTGACTGGACAGATGGACCTGGCTCAAGCAACTACTCTGGATGC
 401 ACTTTGCTGTGTGGGATGAACTAAAAGTGTCTGAATTTTGCTGATAACTTTATAAAACTCACTATGGCATGCTTCCCTCC
 481 TGGTGGGCCCTAGGATGGATGACACTCAAGATACTACAGATGTGGGTGCAGGCATGCACACACACGATGGAATATGGCCA
 561 TTCCTACACAGGTGGGGTAGAGAGTGGGTCAGCAGCCTGGCACCTCACAGAGGTGGGACCTAAGAGGACTCATGATTATG
 641 CAGAGAATTGGATTGGGTCTCTGTCATAGATTGAGTAATCTCTTCCCTTACCTCAATTCCATCTCCACCCATCTCTACAT
 721 CTGGGCACAGCAACCCAGAGATGGCCAAAAGCATTCAAGCCTGGGGGAAGATGTTTGACTATTGCTGCTCTTCACCAGAA
 801 CCTCACACCTCTCCTGGGACTGGAACCCTTCAGTGGGTGTGTGGCCAGTTTTGGAGGCTGGAATGATGGGCCAGGGTGTA
 881 GGATTCATTCTCCATGTAAAGTTTCCTTTCATCCTGCCTAGCCATCCCCAAGGTTTATTTCCAGAAGAAAGGAATATCTC
 961 TACTTGGATCAATTCTGGTCATTTCAAGAGGATGGAGGCCTCAAGTGTGGGAACTTCCCCTACTCCCTGGATGTGTGTAC
1041 CTAGCACACTTCCTTCTCCCACCCCTTTTTCCAGTTGGATTTGTTTTTCTGTTCTCTTCTGTCCTGTCTTATACTGCAAC
1121 TGTGTCTCCTAGGGGACAGATGGCCTTCTTTGTCATCTTCACTCTCCACCCCCAGAGAGGAGTCAGAGCCATAACTCAAT
1201 CACTCAGCCCCTCCAAAGATAGTTGATGTGTGATAATCTCATAATGTTGAGAACCCTGATGAGATACATTGTCTTCCTCT
1281 CCCTACAATGCCTCTGGGGCCAAGGCACCCATTCTTCTTGCTATCCTCCATCCCCCTTGAGGCTTCCACTTTTTTTTTTT
1361 TTAGACATAAAGCTGGGCATCAGCAACTGGCCTGTGGTGATGCAAAGCTGCTTTGCTCTGTATCTGGCTGGACTGATCTG
1441 TCTCACAAGAAGCCATGAGGCCATAGGGAGAAGCTCCCTCTCCCCTTCATCTTCTGCTCCAAAGGTGGTAGCAAGAGGAG
1521 TACCCAGTTAGGGGTTGGAGCCCCCATATAACATCTTCCTGTCAGAAGACTGATGGATCTTTTTCATTCCAACCATCTCC
1601 CTTTCCCCCGATGAATGCAATAAAACTCTGTGACACCAGCAACCATTGCTCTTTAGAAATGGGTTTTCTGATCATATGGC
1681 TGATGTGTTATGGGCAGTATGGATGTCTTCATTTGTTGCTTCTGTTTTTCATCTTTTTTGTTTTATTAATAAAAATTTAT
1761 GTATTTGCTCCTGTTACTATAATAATACAGGGAATAAATTATTCAATCCAAATTTCTGTACAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuAUUUCAGAUACAUACCGUu 5'
            ||||  ||   ||||||| 
Target 5' taTAAA-ACTCACTATGGCAt 3'
 451 - 470 150.00 -7.80
2 
miRNA  3' uuAUUUCAGAUAC----AUACCGuu 5'
            |::: |:| ||    ||||||  
Target 5' aaTGGGTTTTCTGATCATATGGCtg 3'
 1658 - 1682 129.00 -6.80
3 
miRNA  3' uuaUUUCAGAUAC---AUACCGuu 5'
             | |  | |||   ||||||  
Target 5' cacACACACGATGGAATATGGCca 3'
 537 - 560 126.00 -5.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26989115 13 COSMIC
COSN26571275 17 COSMIC
COSN26171314 21 COSMIC
COSN30473146 38 COSMIC
COSN30169815 71 COSMIC
COSN31488052 114 COSMIC
COSN30103802 129 COSMIC
COSN30167252 146 COSMIC
COSN30516284 149 COSMIC
COSN31572536 179 COSMIC
COSN31586993 211 COSMIC
COSN31492176 218 COSMIC
COSN26584938 234 COSMIC
COSN31530684 298 COSMIC
COSN28798198 501 COSMIC
COSN7617328 695 COSMIC
COSN31485013 1231 COSMIC
COSN20109752 1363 COSMIC
COSN27344719 1363 COSMIC
COSN5717583 1549 COSMIC
COSN31591483 1555 COSMIC
COSN31602885 1569 COSMIC
COSN26296185 1639 COSMIC
COSN31959598 1654 COSMIC
COSN27601909 1711 COSMIC
COSN18931743 1735 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1428808477 1 dbSNP
rs372809865 4 dbSNP
rs1368470462 8 dbSNP
rs752399995 13 dbSNP
rs1349534685 15 dbSNP
rs755682356 16 dbSNP
rs1345384797 21 dbSNP
rs1229413305 25 dbSNP
rs777648807 30 dbSNP
rs749087708 31 dbSNP
rs375854429 35 dbSNP
rs199634137 36 dbSNP
rs553314590 37 dbSNP
rs958220819 39 dbSNP
rs1196603798 40 dbSNP
rs1385590099 43 dbSNP
rs775388838 49 dbSNP
rs747273151 52 dbSNP
rs769312249 53 dbSNP
rs1338036402 58 dbSNP
rs1012530480 62 dbSNP
rs575067794 64 dbSNP
rs1161761880 66 dbSNP
rs1401459828 77 dbSNP
rs1023092980 78 dbSNP
rs1156866780 82 dbSNP
rs1446577690 87 dbSNP
rs1385784506 91 dbSNP
rs1182844796 94 dbSNP
rs963121113 95 dbSNP
rs183831857 102 dbSNP
rs1216275249 111 dbSNP
rs530748943 112 dbSNP
rs989645437 114 dbSNP
rs1407057895 115 dbSNP
rs922211745 118 dbSNP
rs1327951600 120 dbSNP
rs951545244 130 dbSNP
rs1381262737 140 dbSNP
rs759060338 143 dbSNP
rs987880933 144 dbSNP
rs911875715 145 dbSNP
rs186995946 152 dbSNP
rs1344814293 156 dbSNP
rs1392412819 157 dbSNP
rs1440359542 180 dbSNP
rs191857562 184 dbSNP
rs1337817283 193 dbSNP
rs1163035475 194 dbSNP
rs1442658331 202 dbSNP
rs1237331681 221 dbSNP
rs1421620745 222 dbSNP
rs1036436617 227 dbSNP
rs1357649466 242 dbSNP
rs112624546 243 dbSNP
rs912808726 245 dbSNP
rs920663893 247 dbSNP
rs965656391 249 dbSNP
rs1490417500 254 dbSNP
rs1270691224 257 dbSNP
rs930515636 259 dbSNP
rs1333533287 261 dbSNP
rs1198786731 263 dbSNP
rs1055622383 266 dbSNP
rs545938149 268 dbSNP
rs1252221277 272 dbSNP
rs185138251 274 dbSNP
rs1357892393 281 dbSNP
rs1298448077 286 dbSNP
rs947464987 290 dbSNP
rs1043551014 291 dbSNP
rs1014132147 294 dbSNP
rs1476123253 298 dbSNP
rs924720976 301 dbSNP
rs1346424902 303 dbSNP
rs781422891 311 dbSNP
rs1415692728 312 dbSNP
rs1388852751 315 dbSNP
rs1356196177 317 dbSNP
rs1056929895 318 dbSNP
rs550823129 323 dbSNP
rs1417063059 326 dbSNP
rs1171562436 332 dbSNP
rs902821950 337 dbSNP
rs142821114 349 dbSNP
rs189921682 367 dbSNP
rs1389939748 376 dbSNP
rs1032801299 378 dbSNP
rs568045452 379 dbSNP
rs533307510 382 dbSNP
rs1307452741 385 dbSNP
rs1256520041 402 dbSNP
rs1225779687 403 dbSNP
rs1346365530 410 dbSNP
rs1282949762 412 dbSNP
rs776048798 414 dbSNP
rs994574332 416 dbSNP
rs1298840446 433 dbSNP
rs1291996423 443 dbSNP
rs550810876 445 dbSNP
rs953778574 452 dbSNP
rs1178292426 461 dbSNP
rs1252602638 465 dbSNP
rs987714020 473 dbSNP
rs1019604260 477 dbSNP
rs1470174764 478 dbSNP
rs1428157561 481 dbSNP
rs950479710 482 dbSNP
rs1420520077 488 dbSNP
rs1250559573 494 dbSNP
rs193182110 501 dbSNP
rs1194904018 510 dbSNP
rs539217781 517 dbSNP
rs1278985996 520 dbSNP
rs1480576486 523 dbSNP
rs1019794108 530 dbSNP
rs972034658 537 dbSNP
rs557506620 546 dbSNP
rs1185605046 557 dbSNP
rs1231271906 568 dbSNP
rs570643528 575 dbSNP
rs1223339393 581 dbSNP
rs921251670 584 dbSNP
rs546577272 589 dbSNP
rs915721649 602 dbSNP
rs1405014475 611 dbSNP
rs924692812 614 dbSNP
rs765377835 619 dbSNP
rs1157706486 620 dbSNP
rs1416853028 627 dbSNP
rs1379000625 632 dbSNP
rs1045678391 637 dbSNP
rs903084141 648 dbSNP
rs1462171326 658 dbSNP
rs1167564087 662 dbSNP
rs934349717 662 dbSNP
rs1199137591 668 dbSNP
rs1486958769 686 dbSNP
rs1261589084 688 dbSNP
rs1238412027 689 dbSNP
rs1351511939 690 dbSNP
rs1317267423 692 dbSNP
rs1056854137 712 dbSNP
rs1054089338 718 dbSNP
rs1381988005 723 dbSNP
rs892895279 724 dbSNP
rs749697181 731 dbSNP
rs866637403 741 dbSNP
rs1436962376 743 dbSNP
rs755087219 759 dbSNP
rs1287992550 762 dbSNP
rs1451183920 764 dbSNP
rs1366832191 765 dbSNP
rs1163701035 766 dbSNP
rs115151476 768 dbSNP
rs553136127 770 dbSNP
rs772535761 772 dbSNP
rs574738853 773 dbSNP
rs899107261 779 dbSNP
rs779206510 784 dbSNP
rs1226165733 789 dbSNP
rs994899620 790 dbSNP
rs1047468089 804 dbSNP
rs1275059863 810 dbSNP
rs1349687058 814 dbSNP
rs1358619815 815 dbSNP
rs962258526 818 dbSNP
rs1263673266 819 dbSNP
rs972044607 821 dbSNP
rs748160608 839 dbSNP
rs886148635 860 dbSNP
rs73346082 864 dbSNP
rs932022372 867 dbSNP
rs1294601908 870 dbSNP
rs1397704078 879 dbSNP
rs1279402185 890 dbSNP
rs1303204854 891 dbSNP
rs1423515141 897 dbSNP
rs1488548657 902 dbSNP
rs991559269 905 dbSNP
rs1019763017 907 dbSNP
rs915967403 914 dbSNP
rs1161903729 925 dbSNP
rs557607196 928 dbSNP
rs185542259 929 dbSNP
rs1373943577 939 dbSNP
rs981679683 963 dbSNP
rs901355485 970 dbSNP
rs924531167 986 dbSNP
rs1200222108 988 dbSNP
rs934525983 1013 dbSNP
rs1490226352 1018 dbSNP
rs1054142349 1019 dbSNP
rs892779853 1021 dbSNP
rs1340019332 1024 dbSNP
rs1028979052 1026 dbSNP
rs1216621909 1027 dbSNP
rs1325226069 1031 dbSNP
rs1283600694 1032 dbSNP
rs932297328 1036 dbSNP
rs1395883453 1050 dbSNP
rs979169652 1052 dbSNP
rs141978690 1063 dbSNP
rs1397888542 1064 dbSNP
rs1170386611 1065 dbSNP
rs1464449839 1066 dbSNP
rs1172103925 1072 dbSNP
rs773102650 1074 dbSNP
rs1177338270 1075 dbSNP
rs548870297 1080 dbSNP
rs746996742 1087 dbSNP
rs917058820 1095 dbSNP
rs1438300047 1097 dbSNP
rs948542780 1097 dbSNP
rs546456032 1102 dbSNP
rs1291156940 1110 dbSNP
rs189471886 1120 dbSNP
rs979989602 1122 dbSNP
rs920502965 1129 dbSNP
rs1381159985 1130 dbSNP
rs890869637 1136 dbSNP
rs1263540727 1165 dbSNP
rs1009098799 1173 dbSNP
rs930578572 1174 dbSNP
rs566863980 1177 dbSNP
rs1303559535 1185 dbSNP
rs1372698065 1192 dbSNP
rs1047391546 1196 dbSNP
rs1445220558 1196 dbSNP
rs1019034332 1197 dbSNP
rs898083725 1202 dbSNP
rs993686617 1209 dbSNP
rs1027623789 1217 dbSNP
rs369148688 1226 dbSNP
rs540277045 1230 dbSNP
rs1423382726 1232 dbSNP
rs535445072 1233 dbSNP
rs1354160459 1239 dbSNP
rs1160357414 1241 dbSNP
rs377459215 1247 dbSNP
rs549474564 1255 dbSNP
rs1379771417 1256 dbSNP
rs1176633433 1257 dbSNP
rs1462612509 1258 dbSNP
rs1241028922 1282 dbSNP
rs1243482551 1283 dbSNP
rs1023088673 1289 dbSNP
rs1202839402 1289 dbSNP
rs561538775 1291 dbSNP
rs1485524294 1293 dbSNP
rs1280736718 1296 dbSNP
rs1205205141 1301 dbSNP
rs1349254840 1305 dbSNP
rs1306474955 1307 dbSNP
rs1204607022 1309 dbSNP
rs981276080 1332 dbSNP
rs1447835206 1334 dbSNP
rs900277387 1336 dbSNP
rs1052194298 1349 dbSNP
rs34140057 1350 dbSNP
rs879132832 1350 dbSNP
rs1191991041 1351 dbSNP
rs1394796319 1352 dbSNP
rs1420035412 1353 dbSNP
rs1161817076 1359 dbSNP
rs924416638 1363 dbSNP
rs1453738401 1364 dbSNP
rs200338294 1365 dbSNP
rs1325936352 1367 dbSNP
rs955954842 1377 dbSNP
rs1181059218 1378 dbSNP
rs528846485 1384 dbSNP
rs997415218 1390 dbSNP
rs1028531419 1391 dbSNP
rs1283214117 1394 dbSNP
rs549305751 1402 dbSNP
rs562468594 1405 dbSNP
rs1396073140 1417 dbSNP
rs1293226181 1423 dbSNP
rs1228256553 1435 dbSNP
rs180695384 1459 dbSNP
rs776247794 1461 dbSNP
rs1431698440 1465 dbSNP
rs914475989 1477 dbSNP
rs1031604837 1483 dbSNP
rs551201174 1486 dbSNP
rs1296395235 1490 dbSNP
rs1304658676 1490 dbSNP
rs1366114915 1493 dbSNP
rs932376204 1495 dbSNP
rs956060562 1497 dbSNP
rs1421326275 1500 dbSNP
rs1186921555 1524 dbSNP
rs766091997 1532 dbSNP
rs1273813553 1535 dbSNP
rs1260661503 1538 dbSNP
rs1200949628 1545 dbSNP
rs1490350449 1546 dbSNP
rs1245634856 1549 dbSNP
rs1221411080 1553 dbSNP
rs992815159 1554 dbSNP
rs1275515111 1573 dbSNP
rs1215571647 1580 dbSNP
rs1024798808 1593 dbSNP
rs970203990 1595 dbSNP
rs1337055828 1596 dbSNP
rs1049856095 1610 dbSNP
rs1211963798 1611 dbSNP
rs1293044357 1613 dbSNP
rs920446806 1622 dbSNP
rs912319511 1623 dbSNP
rs983383967 1626 dbSNP
rs1464966234 1630 dbSNP
rs1421210034 1643 dbSNP
rs1178068681 1646 dbSNP
rs907816194 1647 dbSNP
rs1423807355 1652 dbSNP
rs1188991308 1655 dbSNP
rs1487778048 1659 dbSNP
rs943744568 1666 dbSNP
rs1040536844 1671 dbSNP
rs944341372 1674 dbSNP
rs897967833 1676 dbSNP
rs1179299322 1678 dbSNP
rs1225529544 1685 dbSNP
rs1324580087 1692 dbSNP
rs1300643391 1695 dbSNP
rs1375435696 1697 dbSNP
rs1298608713 1704 dbSNP
rs1445967169 1716 dbSNP
rs1397783071 1733 dbSNP
rs1338493549 1734 dbSNP
rs1358266557 1734 dbSNP
rs1469967598 1734 dbSNP
rs1040095676 1740 dbSNP
rs1248890282 1741 dbSNP
rs373243118 1748 dbSNP
rs1408080660 1751 dbSNP
rs1179749352 1752 dbSNP
rs1439646685 1753 dbSNP
rs1236693501 1754 dbSNP
rs1166295763 1755 dbSNP
rs931752539 1757 dbSNP
rs1050318062 1758 dbSNP
rs1208283785 1758 dbSNP
rs1459404312 1778 dbSNP
rs1310104590 1779 dbSNP
rs904703943 1780 dbSNP
rs993612275 1782 dbSNP
rs1049324313 1786 dbSNP
rs568979909 1788 dbSNP
rs888023317 1790 dbSNP
rs1443948641 1801 dbSNP
rs1296193849 1803 dbSNP
rs1300648524 1804 dbSNP
rs1372345547 1805 dbSNP
rs759391325 1807 dbSNP
rs753587921 1812 dbSNP
rs1012953624 1813 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 79837.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuAUUUCAGAUACAUACCGUu 5'
            ||||  ||   ||||||| 
Target 5' uaUAAA-ACUCACUAUGGCAu 3'
 		8 - 27
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000354947.5 | 3UTR | AUAACUUUAUAAAACUCACUAUGGCAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
69 hsa-miR-5590-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT056313 WAC WW domain containing adaptor with coiled-coil 2 6
MIRT066181 PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma 2 2
MIRT095612 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT099166 MYLIP myosin regulatory light chain interacting protein 2 2
MIRT107578 VLDLR very low density lipoprotein receptor 2 2
MIRT179602 CAPZA1 capping actin protein of muscle Z-line alpha subunit 1 2 8
MIRT241303 ZC3H12C zinc finger CCCH-type containing 12C 2 8
MIRT244620 MCM4 minichromosome maintenance complex component 4 2 2
MIRT270705 SBNO1 strawberry notch homolog 1 2 4
MIRT453616 SNRPE small nuclear ribonucleoprotein polypeptide E 2 4
MIRT453653 RAB6C RAB6C, member RAS oncogene family 2 2
MIRT464159 VMP1 vacuole membrane protein 1 2 15
MIRT477720 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 2 2
MIRT484301 ENDOD1 endonuclease domain containing 1 2 4
MIRT496069 GLCCI1 glucocorticoid induced 1 2 2
MIRT496338 TMEM81 transmembrane protein 81 2 2
MIRT496653 PITPNM3 PITPNM family member 3 2 2
MIRT499098 DENND4C DENN domain containing 4C 2 8
MIRT499862 SVOP SV2 related protein 2 12
MIRT504913 CD38 CD38 molecule 2 4
MIRT515401 WDR72 WD repeat domain 72 2 4
MIRT518156 TMEM133 transmembrane protein 133 2 2
MIRT518558 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT518636 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT518724 ABCG8 ATP binding cassette subfamily G member 8 2 2
MIRT524301 CTC1 CST telomere replication complex component 1 2 4
MIRT524472 CHRM3 cholinergic receptor muscarinic 3 2 4
MIRT527562 ADCY7 adenylate cyclase 7 2 2
MIRT532694 TCN2 transcobalamin 2 2 4
MIRT534640 RNF6 ring finger protein 6 2 2
MIRT537163 GGCX gamma-glutamyl carboxylase 2 2
MIRT539360 AFF4 AF4/FMR2 family member 4 2 2
MIRT547023 PPP1CB protein phosphatase 1 catalytic subunit beta 2 2
MIRT548155 FRAT2 FRAT2, WNT signaling pathway regulator 2 2
MIRT550127 ZNF138 zinc finger protein 138 2 2
MIRT558473 DBN1 drebrin 1 2 2
MIRT566862 LRRC58 leucine rich repeat containing 58 2 2
MIRT567246 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 2
MIRT572848 BRPF3 bromodomain and PHD finger containing 3 2 2
MIRT574914 Vmp1 vacuole membrane protein 1 2 9
MIRT606849 RAB7A RAB7A, member RAS oncogene family 2 2
MIRT611274 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT612328 TRPS1 transcriptional repressor GATA binding 1 2 2
MIRT612415 SP1 Sp1 transcription factor 2 2
MIRT614791 RRAGC Ras related GTP binding C 2 2
MIRT618449 SERPINA3 serpin family A member 3 2 2
MIRT621154 MICALCL MICAL C-terminal like 2 2
MIRT622141 SOX4 SRY-box 4 2 2
MIRT623504 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT623598 IPO9 importin 9 2 2
MIRT624075 EBF1 early B-cell factor 1 2 2
MIRT639792 MVK mevalonate kinase 2 2
MIRT641109 ZNF274 zinc finger protein 274 2 2
MIRT641579 RFX1 regulatory factor X1 2 2
MIRT643095 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT645141 CUBN cubilin 2 2
MIRT646461 PRDM10 PR/SET domain 10 2 2
MIRT650815 HMOX1 heme oxygenase 1 2 2
MIRT653073 ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 2 2
MIRT657675 GPR26 G protein-coupled receptor 26 2 2
MIRT665824 TIMM8B translocase of inner mitochondrial membrane 8 homolog B 2 2
MIRT695592 TMEM199 transmembrane protein 199 2 2
MIRT698039 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT701015 PCGF5 polycomb group ring finger 5 2 2
MIRT701357 NR4A3 nuclear receptor subfamily 4 group A member 3 2 2
MIRT707114 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT718661 HNF4A hepatocyte nuclear factor 4 alpha 2 2
MIRT719901 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT720564 C1RL complement C1r subcomponent like 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-5590-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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