miRTarBase - #MIRT066953


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pre-miRNA Information
pre-miRNA hsa-mir-3616   
Genomic Coordinates chr20: 47166967 - 47167058
Description Homo sapiens miR-3616 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3616-3p
Sequence 60| CGAGGGCAUUUCAUGAUGCAGGC |82
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 20 + 47167028 29233923 MiREDiBase
A-to-I 20 20 + 47167045 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1241656567 2 dbSNP
rs1336777739 8 dbSNP
rs1288261512 13 dbSNP
rs750749182 21 dbSNP
rs751652021 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ATXN7L3B   
Synonyms lnc-SCA7
Description ataxin 7 like 3B
Transcript NM_001136262   
Expression
Putative miRNA Targets on ATXN7L3B
3'UTR of ATXN7L3B
(miRNA target sites are highlighted)		 
>ATXN7L3B|NM_001136262|3'UTR
   1 CTGCAAAATGAGAGTCTGAAAGTGGCCAGGACAATAACATAGACTGGTCCTGTGGCTTCGAGGAGTAAGCTAAGTAGAAA
  81 AAAGTAGAAAAATCAGACAAAAGTTTTAATTCCCCCTTGAAGATCCTAGCATTTAAAAACCCAAAGTGGATAATTTAGGA
 161 ATCCTTTTTTTAAAGTGTATTACCTGGAGCAAGCTCTGAAGCCCTGGGCAGGAGGAGCTGCACAGCCTGCGGGCCATGCA
 241 GTGCCTGTTGATCTCTAAACACACCAGGATGTGCGCAAGATCCTGTAGTGCCCCCAGTGCACAGGTGAGCAGTTGTGTGC
 321 CCAGCATATAAAATTTTTGGTTCCTCAGCCTTTCTGTCTGCCTGATGTCAAGGGCTTCCTGGACAGTTTGGACGTTACAG
 401 TTCGTCAGGCCGTGATCAGTGGCCTGCAGTGGGACTGCTCCTTTGATATCTGAACCTCTGTTATGGGCTTCTCTGAGACA
 481 AGTAAATGTCAGGTGCAAGATCTGGATACTAACAGTTTCAGTTTGGGAAATCCAAGAAAAAGAATTATCAAGTTTGATAG
 561 GGAAGCTCTGTAGCCTTGACTCCAGCAAGAAGAAAAGGTCAAAACCACGTGTTTCCCAAAAGTCCAGACTACAATGATTC
 641 AGCTGACTTGAGGACAAGGCCTAGCATTTGGCTGAGCAGAGCCCTCTTCCTTGCCCTCCAACCTGGTGGCATAGGCTTGG
 721 CAAATGGACAACTTGGTTGTCCAGACAGGTTGAGGATTCGGTTATGATCCCCTGGGGAGGTAGCAGGGACCTCTGCAACT
 801 ATGCATGATTTCTCAAACTTCAAGATTCATGTCTGGATGTATTATGCTGTGGATATAAGTTTAGTAGGGCGGTCATTTCC
 881 TACTCTGAGTTACTGGTTACCTAGCCAGTCCATGGGTGTGACTTGGTCCTTAAGTCAGGTCACTATCTGCCTCCCACCCT
 961 GGGGGCAGGACTGAAGTATAGAAGAGCATCATGGCTGTGCAGGAGGCTGTGGTTTGAAAACTGAGCCCAGAGGGCACTTT
1041 CAGCTGCCCTCAATAATGTGAATGGATTAGTGCTAGGAGCCAAGGAGCAGGACTGGATTATCTCATCTGACTGTGTGCAG
1121 AATCCTGTTGAATGTCCCTGTTTTCTTTGGTTGGGCAGTCAGAGCTCTGCTATGGTGAACATCCAGACTGTCACCACTTT
1201 CTGTCTGCCGCTCGAAAGGGATAGTCCTTTCCACTCGGTCCCCTTTGGATCTTCTTGACAACAGGAGCAGTCCTTTTATT
1281 GTTAGAAGTCAGAGAAAGACCTCCAGAATCTCCTGACTTTAGGGAATGGTATAGGGGAAGATGGGAAGTAAGAGTCACAT
1361 ATCAAAACTACCCTCCACTTTATTCCCTGAGCGAGGGTTTATGAAGTATAAAGGGGTGGGAGCCCCGAGGTGAGCGGGAA
1441 CGGTGCTGCTTTATTTGAAATGTTTTCTTACCTCATTCTGTGCCCCAGTAGGGGGTCCAGCCTCATCTGTCTGGCTTGGC
1521 CCTGTGTTCCTCCTGTCCCCTGCTCCACTGCCTATCTGGTGCCCCAGGTGCTGCTTGCCACTCCAGCTGTCACATTGAAC
1601 AGTTTCAATTCAGCTCTTAATGCTCCTGCTTCCGAAGCCTGCCCAATTTCTTTTTTCTTGGCCTCTGTTTTTTTTTTTTC
1681 TTTCTTTTTCCCTTGTTTTTGTAGAAGACTCAGAGGAGAATCTTTCTTATGGCTCCCTCTGTTGAGATTGGAATTGGAAG
1761 AGAACTTAATTTTTTGTATTTAAAATGCAGTGTCATGCCTATAAGCATTTCTCCTATATAGGACTGCTTTGCTAGTGTGC
1841 CCTCTTGCTGTGTCTTACTTCATAAGGAGTTGTATCTTCCCACCTCCATTTCAATACTGCCGGTTAGGACCTAAGTAGAA
1921 GAGCAGTAAAGGCTGATTGACACACAGGGGGATGGAGTTGGTCCTTGTCCATTCTCTCACCCTTGCTGTGCATGTATCAA
2001 TCCTTATCCCAGAAGGTACTATTTAGACTGTATAGACTGATTTAGATTACATACTTTAGAGGATTAAGGAAACCATAGAG
2081 TTTGGGCCTTGGAACTGTTACTGCCTTGTCCTAGAGTTGTCCTGATCAGGCTTGGGGCCTAGTTACAGATTAGTCTTAAA
2161 GAATTGCATTAACTTAAAAAAAATCAAACCTTGGCAAGAGCTAAAATAATTTGGAGATATCTTTGCCCTTGACTTGTAGA
2241 CGACATCTAAGAGGATGAAGAAAGGAGAGTCTAAGTGAGACTCTGGCCTACTTCCTAACAATGTCTTGGAAGTGGGATGA
2321 TGGTAAAGGAGAAAGGCCACAGTCCAATCCCTCTGCCTTCAGATAGGGAACTCAAATCCTGAAATTACTGTTTTCTTTCT
2401 GGCCTTTTCTCCTGGTTAGAGGAGGAAGCGGAAAGTAGTTTTGAGTAATACTTTGTTCATATTACCCCCCTTTTGTTTTT
2481 TGTTTCTGGCCCCTCTACCAATAGGGCAGTAGCCTCCTGCCCTGGATGGGTATAAGGTGGGCTTGGTCCAACAGGTGCCC
2561 AGAGGGTACATACTCCTTTCTGGGGAGAGAATGCTCCCTACCATATAGTTGACAGTGGTTAGGAACTCTCCCTTTCCCTA
2641 CCTACCTTCCTTTTAATAGCAGAATTCCTATTTTTCCCTTGATTATGTGTATTGATCACCCTGCAATCCTATTATGTATC
2721 TGAGTGTGTGTGTGTGTGTATGTGTGTGTTATGGGGGAAGGGGGGGGTTCTTTAAAATTTCTGTGGTTTGTGGCTTTTTC
2801 TTCCATACATTAGTTCCCACCATCGCATGCCCAGGGACCACTGCCTGGCATTATCGCATGCTGGGATCATCGGGGGAGGG
2881 TAGTGAAGCTCACCACTGTCCTTTGTTTTGGAGATTTTTATTTTTGCATAAGTAGTCCATCCTATACAGATAGCTGATTA
2961 ACTGTATTCCCCTTTCCCCTATGGCTGCTGGTGTAAATAAACTGCATCTCCCCATTGGTAAACAGTAATAAAATTTTAAA
3041 AAATGAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cgGACGUAGU-ACUUUACGGGAGc 5'
            |||| |:: | : :||||||| 
Target 5' gaCTGCTTTGCTAGTGTGCCCTCt 3'
 1822 - 1845 157.00 -16.63
2 
miRNA  3' cggaCGUAGUACUUUACGGGAGc 5'
              ||| : | |: ||||||| 
Target 5' gaggGCACTTTCAGCTGCCCTCa 3'
 1030 - 1052 155.00 -14.80
3 
miRNA  3' cgGACGUAGUACUUUACGGGAGc 5'
            || | || |    ||||||| 
Target 5' ccCT-CTTCCT----TGCCCTCc 3'
 682 - 699 142.00 -11.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30164552 11 COSMIC
COSN1151924 12 COSMIC
COSN31570931 58 COSMIC
COSN31611732 84 COSMIC
COSN30135231 88 COSMIC
COSN15623245 117 COSMIC
COSN24304571 272 COSMIC
COSN30111989 332 COSMIC
COSN31487830 355 COSMIC
COSN30120349 393 COSMIC
COSN31517177 404 COSMIC
COSN30118713 458 COSMIC
COSN9755400 503 COSMIC
COSN30135757 542 COSMIC
COSN31515230 543 COSMIC
COSN28686891 628 COSMIC
COSN32138128 753 COSMIC
COSN30125695 760 COSMIC
COSN31556674 803 COSMIC
COSN30142409 811 COSMIC
COSN31546127 830 COSMIC
COSN30529163 832 COSMIC
COSN23068064 837 COSMIC
COSN23336819 840 COSMIC
COSN30165588 858 COSMIC
COSN30125893 872 COSMIC
COSN30138957 898 COSMIC
COSN31485201 912 COSMIC
COSN30531519 913 COSMIC
COSN20109840 916 COSMIC
COSN8586682 932 COSMIC
COSN20109841 1160 COSMIC
COSN31488813 1178 COSMIC
COSN31517459 1215 COSMIC
COSN9755401 1215 COSMIC
COSN30509899 1237 COSMIC
COSN31483021 1237 COSMIC
COSN8586683 1266 COSMIC
COSN31589745 1336 COSMIC
COSN15623246 1387 COSMIC
COSN26643750 1428 COSMIC
COSN30510323 1445 COSMIC
COSN26638376 1483 COSMIC
COSN30129764 1506 COSMIC
COSN30130318 1520 COSMIC
COSN30116819 1598 COSMIC
COSN19655185 1668 COSMIC
COSN20109842 1680 COSMIC
COSN30543832 1691 COSMIC
COSN30543970 1693 COSMIC
COSN31609889 1727 COSMIC
COSN30532353 1734 COSMIC
COSN28741050 1758 COSMIC
COSN23012399 1776 COSMIC
COSN30541167 1788 COSMIC
COSN31550647 1788 COSMIC
COSN32056122 1813 COSMIC
COSN150096 1819 COSMIC
COSN30116887 1905 COSMIC
COSN26957908 1948 COSMIC
COSN30025318 1991 COSMIC
COSN31595915 2032 COSMIC
COSN31482421 2037 COSMIC
COSN30142733 2065 COSMIC
COSN30143062 2089 COSMIC
COSN30123859 2133 COSMIC
COSN20109848 2184 COSMIC
COSN31960819 2191 COSMIC
COSN9476388 2206 COSMIC
COSN15784714 2229 COSMIC
COSN31608155 2243 COSMIC
COSN26573780 2320 COSMIC
COSN2515639 2385 COSMIC
COSN31609315 2409 COSMIC
COSN8586684 2431 COSMIC
COSN31535279 2435 COSMIC
COSN31565813 2471 COSMIC
COSN17153157 2481 COSMIC
COSN8541368 2491 COSMIC
COSN28818081 2558 COSMIC
COSN31531415 2565 COSMIC
COSN31512792 2585 COSMIC
COSN31610516 2596 COSMIC
COSN27287497 2692 COSMIC
COSN15623247 2700 COSMIC
COSN1151925 2733 COSMIC
COSN29474225 2733 COSMIC
COSN30110737 2735 COSMIC
COSN23012401 2740 COSMIC
COSN1151926 2741 COSMIC
COSN26600424 2747 COSMIC
COSN30114060 2779 COSMIC
COSN15623248 2875 COSMIC
COSN30141721 2932 COSMIC
COSN27557800 3004 COSMIC
COSN31542044 3013 COSMIC
COSN31515172 3032 COSMIC
COSN9476389 3248 COSMIC
COSN16864615 3376 COSMIC
COSN16590036 3385 COSMIC
COSN21373672 3770 COSMIC
COSN22792650 4507 COSMIC
COSN8541369 4689 COSMIC
COSN25911852 4691 COSMIC
COSN21543426 4917 COSMIC
COSN19270051 5457 COSMIC
COSN1584808 5578 COSMIC
COSN15228264 5638 COSMIC
COSN1584809 5694 COSMIC
COSN20795422 5780 COSMIC
COSN24454112 6041 COSMIC
COSN22811661 6722 COSMIC
COSN5327625 6847 COSMIC
COSN15683685 6908 COSMIC
rs17113730 4341 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1229411524 3 dbSNP
rs1352856699 4 dbSNP
rs1397051877 7 dbSNP
rs773479272 17 dbSNP
rs549192762 24 dbSNP
rs1339022481 29 dbSNP
rs1452249259 31 dbSNP
rs1298564565 39 dbSNP
rs760882583 40 dbSNP
rs908630379 41 dbSNP
rs1226253404 44 dbSNP
rs1336267302 48 dbSNP
rs776303380 49 dbSNP
rs543078889 50 dbSNP
rs771034379 53 dbSNP
rs898636695 65 dbSNP
rs1471965360 72 dbSNP
rs1237512981 82 dbSNP
rs1003775965 87 dbSNP
rs1189025450 91 dbSNP
rs1440284089 92 dbSNP
rs1277551122 98 dbSNP
rs373171800 99 dbSNP
rs1331713084 101 dbSNP
rs1432979595 104 dbSNP
rs1228270030 112 dbSNP
rs1015115254 113 dbSNP
rs578182382 114 dbSNP
rs753866289 117 dbSNP
rs755471152 120 dbSNP
rs1445926524 123 dbSNP
rs543651149 125 dbSNP
rs938272517 127 dbSNP
rs1055365750 129 dbSNP
rs953579534 132 dbSNP
rs7959911 136 dbSNP
rs1399974393 137 dbSNP
rs1294058380 141 dbSNP
rs2001937 142 dbSNP
rs1384932113 143 dbSNP
rs192367948 145 dbSNP
rs944642905 148 dbSNP
rs1024352352 150 dbSNP
rs902952810 151 dbSNP
rs1188865390 153 dbSNP
rs1465996646 155 dbSNP
rs1352616489 160 dbSNP
rs1229055530 162 dbSNP
rs1287766609 164 dbSNP
rs1041587486 166 dbSNP
rs1032837500 167 dbSNP
rs1247545118 172 dbSNP
rs183080465 173 dbSNP
rs1488355441 176 dbSNP
rs975339028 177 dbSNP
rs1253495368 178 dbSNP
rs775011748 185 dbSNP
rs1298579620 196 dbSNP
rs1483201783 199 dbSNP
rs1181050353 201 dbSNP
rs527594494 206 dbSNP
rs547245275 208 dbSNP
rs1318231232 209 dbSNP
rs935871477 215 dbSNP
rs1054690539 216 dbSNP
rs894257012 217 dbSNP
rs1403078063 218 dbSNP
rs961496649 223 dbSNP
rs1013044088 231 dbSNP
rs1045445701 232 dbSNP
rs906840876 234 dbSNP
rs1186277481 237 dbSNP
rs1489048221 239 dbSNP
rs1220067226 240 dbSNP
rs938153626 240 dbSNP
rs1490336057 241 dbSNP
rs1055266326 245 dbSNP
rs1165393377 251 dbSNP
rs1230719395 251 dbSNP
rs1367880476 255 dbSNP
rs1422493012 256 dbSNP
rs1003870802 258 dbSNP
rs1309667937 258 dbSNP
rs1340287909 260 dbSNP
rs187952023 263 dbSNP
rs533001783 264 dbSNP
rs1295095231 265 dbSNP
rs1045417448 269 dbSNP
rs1364887248 270 dbSNP
rs995050426 274 dbSNP
rs1371185199 275 dbSNP
rs902837349 276 dbSNP
rs368236384 278 dbSNP
rs998586710 282 dbSNP
rs549696366 285 dbSNP
rs1314045989 286 dbSNP
rs1434098252 291 dbSNP
rs1054132217 292 dbSNP
rs1321695205 294 dbSNP
rs1028204708 300 dbSNP
rs1253240672 316 dbSNP
rs1277163289 329 dbSNP
rs1207378462 332 dbSNP
rs996642142 336 dbSNP
rs953490693 346 dbSNP
rs1211030650 349 dbSNP
rs1314199657 350 dbSNP
rs142153044 351 dbSNP
rs1217274532 356 dbSNP
rs1343343812 363 dbSNP
rs955334440 364 dbSNP
rs1288983295 365 dbSNP
rs535550552 368 dbSNP
rs1348138231 371 dbSNP
rs1297126526 372 dbSNP
rs625531 380 dbSNP
rs1360553127 382 dbSNP
rs1174382661 383 dbSNP
rs1469671934 387 dbSNP
rs1230889399 390 dbSNP
rs1413305178 394 dbSNP
rs1471911243 400 dbSNP
rs1483940504 403 dbSNP
rs966045009 404 dbSNP
rs1015624695 412 dbSNP
rs1484323698 413 dbSNP
rs977372387 415 dbSNP
rs1255351669 416 dbSNP
rs1322602885 418 dbSNP
rs1268666804 420 dbSNP
rs1230103252 432 dbSNP
rs1333941519 436 dbSNP
rs924568175 441 dbSNP
rs1442659902 446 dbSNP
rs1170442378 447 dbSNP
rs1380881832 460 dbSNP
rs1390491431 461 dbSNP
rs961349204 465 dbSNP
rs935906893 466 dbSNP
rs990004061 468 dbSNP
rs920017189 470 dbSNP
rs1456045754 475 dbSNP
rs959406699 480 dbSNP
rs1165559666 481 dbSNP
rs1425707975 482 dbSNP
rs1254304319 483 dbSNP
rs1170000322 487 dbSNP
rs1183275885 488 dbSNP
rs1353031792 490 dbSNP
rs1467627367 491 dbSNP
rs1210362006 492 dbSNP
rs151190293 494 dbSNP
rs192069582 499 dbSNP
rs558533863 503 dbSNP
rs1323048317 509 dbSNP
rs918051739 510 dbSNP
rs1244733014 521 dbSNP
rs1300454485 525 dbSNP
rs915708752 539 dbSNP
rs1366372481 545 dbSNP
rs948512670 549 dbSNP
rs552774473 550 dbSNP
rs906934271 552 dbSNP
rs1313632298 553 dbSNP
rs924342237 557 dbSNP
rs1459491548 558 dbSNP
rs569485946 559 dbSNP
rs1163043407 560 dbSNP
rs1054013811 564 dbSNP
rs745525345 566 dbSNP
rs1190268076 574 dbSNP
rs996526694 578 dbSNP
rs1254859601 580 dbSNP
rs578247468 584 dbSNP
rs1459605327 591 dbSNP
rs898085199 592 dbSNP
rs1210307337 593 dbSNP
rs755774515 596 dbSNP
rs377451827 599 dbSNP
rs1027840143 600 dbSNP
rs184459910 601 dbSNP
rs890939841 606 dbSNP
rs1225666561 609 dbSNP
rs1184609429 616 dbSNP
rs3892342 618 dbSNP
rs1364258611 620 dbSNP
rs1416340312 624 dbSNP
rs1019008037 625 dbSNP
rs370342400 632 dbSNP
rs966094772 634 dbSNP
rs576107066 635 dbSNP
rs140410529 636 dbSNP
rs1372245747 641 dbSNP
rs1199307689 648 dbSNP
rs1434774105 658 dbSNP
rs957330402 667 dbSNP
rs374422675 676 dbSNP
rs528324013 677 dbSNP
rs1221092533 682 dbSNP
rs1483122315 683 dbSNP
rs995509786 684 dbSNP
rs1193669436 685 dbSNP
rs1338382183 694 dbSNP
rs1430425254 705 dbSNP
rs1026965014 730 dbSNP
rs1344159884 733 dbSNP
rs1283251409 740 dbSNP
rs1410491447 742 dbSNP
rs1352358927 746 dbSNP
rs1326966026 751 dbSNP
rs1409532196 753 dbSNP
rs1268751499 755 dbSNP
rs959457289 760 dbSNP
rs561353365 761 dbSNP
rs1172930326 762 dbSNP
rs752875023 769 dbSNP
rs990446584 772 dbSNP
rs1470869767 776 dbSNP
rs915819710 779 dbSNP
rs948585632 780 dbSNP
rs981271152 789 dbSNP
rs1300167396 791 dbSNP
rs1198670264 792 dbSNP
rs1472892214 794 dbSNP
rs1179054214 801 dbSNP
rs1436808608 802 dbSNP
rs1278965982 805 dbSNP
rs928403130 806 dbSNP
rs939718213 809 dbSNP
rs1262935263 816 dbSNP
rs1036702205 822 dbSNP
rs879845060 823 dbSNP
rs1210112713 828 dbSNP
rs1277788388 829 dbSNP
rs1441635702 831 dbSNP
rs971304128 832 dbSNP
rs11557005 837 dbSNP
rs898130557 838 dbSNP
rs571757963 840 dbSNP
rs540617885 844 dbSNP
rs1175486294 847 dbSNP
rs1410089985 850 dbSNP
rs1457643576 850 dbSNP
rs1156291572 856 dbSNP
rs924193653 867 dbSNP
rs1237672307 870 dbSNP
rs930921849 871 dbSNP
rs989791819 874 dbSNP
rs1242845478 880 dbSNP
rs914208322 881 dbSNP
rs1466625975 883 dbSNP
rs748021551 884 dbSNP
rs932430660 886 dbSNP
rs564076077 887 dbSNP
rs1248190829 888 dbSNP
rs533056417 889 dbSNP
rs189485719 902 dbSNP
rs1244005672 907 dbSNP
rs1019060360 913 dbSNP
rs10579692 913 dbSNP
rs67268352 913 dbSNP
rs777446799 913 dbSNP
rs771967213 916 dbSNP
rs1435619303 918 dbSNP
rs998874533 921 dbSNP
rs1031686301 926 dbSNP
rs1400065466 932 dbSNP
rs1412839012 935 dbSNP
rs1413832750 937 dbSNP
rs1400587613 957 dbSNP
rs1164938206 961 dbSNP
rs192859927 967 dbSNP
rs1384285602 968 dbSNP
rs1351917445 972 dbSNP
rs1437709248 977 dbSNP
rs1476614790 979 dbSNP
rs1240845335 980 dbSNP
rs2605380 981 dbSNP
rs895130944 986 dbSNP
rs1343304270 990 dbSNP
rs1023343429 991 dbSNP
rs1358983595 998 dbSNP
rs142556357 999 dbSNP
rs1012374106 1012 dbSNP
rs1363752776 1021 dbSNP
rs536761060 1022 dbSNP
rs760899117 1022 dbSNP
rs1288383397 1027 dbSNP
rs981282512 1028 dbSNP
rs1350411819 1030 dbSNP
rs970800990 1032 dbSNP
rs1422281093 1035 dbSNP
rs928414540 1037 dbSNP
rs1221943994 1038 dbSNP
rs1291943157 1041 dbSNP
rs1186303418 1042 dbSNP
rs978665855 1046 dbSNP
rs961134443 1048 dbSNP
rs1197359516 1050 dbSNP
rs549161533 1051 dbSNP
rs1275595265 1052 dbSNP
rs1031103435 1054 dbSNP
rs1305989187 1056 dbSNP
rs1270549631 1059 dbSNP
rs1213834093 1062 dbSNP
rs1220617929 1063 dbSNP
rs972447721 1066 dbSNP
rs1285154350 1073 dbSNP
rs958293690 1081 dbSNP
rs1268411617 1088 dbSNP
rs1489910040 1096 dbSNP
rs1184643578 1100 dbSNP
rs919672683 1102 dbSNP
rs1308147664 1105 dbSNP
rs1463141177 1108 dbSNP
rs1352417017 1114 dbSNP
rs184801138 1126 dbSNP
rs771103393 1131 dbSNP
rs932306815 1133 dbSNP
rs1174968361 1136 dbSNP
rs535057976 1138 dbSNP
rs1252547086 1150 dbSNP
rs1179039274 1152 dbSNP
rs199727656 1154 dbSNP
rs11557006 1155 dbSNP
rs3839973 1156 dbSNP
rs66687418 1156 dbSNP
rs755332705 1156 dbSNP
rs200143738 1160 dbSNP
rs371371363 1162 dbSNP
rs1037286934 1165 dbSNP
rs1406295267 1173 dbSNP
rs1221574141 1180 dbSNP
rs896978452 1186 dbSNP
rs1288369396 1189 dbSNP
rs1163386569 1198 dbSNP
rs1392687482 1198 dbSNP
rs1297295171 1200 dbSNP
rs1370721398 1200 dbSNP
rs931244621 1202 dbSNP
rs1048340451 1204 dbSNP
rs118009023 1209 dbSNP
rs115335784 1210 dbSNP
rs755462673 1211 dbSNP
rs557543366 1214 dbSNP
rs901992384 1219 dbSNP
rs1334591035 1221 dbSNP
rs759712510 1232 dbSNP
rs998967694 1234 dbSNP
rs1462852277 1235 dbSNP
rs1031155888 1237 dbSNP
rs1285859266 1241 dbSNP
rs1357016271 1247 dbSNP
rs1433403270 1260 dbSNP
rs1314669009 1261 dbSNP
rs1305702428 1264 dbSNP
rs1246170563 1272 dbSNP
rs189266758 1278 dbSNP
rs1335126355 1285 dbSNP
rs1452451054 1292 dbSNP
rs1245193009 1293 dbSNP
rs1011151805 1294 dbSNP
rs1452285340 1301 dbSNP
rs536853407 1303 dbSNP
rs55707513 1308 dbSNP
rs147006994 1318 dbSNP
rs1251602904 1321 dbSNP
rs1437297494 1323 dbSNP
rs1383684555 1329 dbSNP
rs1181523882 1330 dbSNP
rs985549566 1334 dbSNP
rs1262318144 1335 dbSNP
rs1012025916 1338 dbSNP
rs1022931554 1349 dbSNP
rs912201663 1366 dbSNP
rs965532219 1372 dbSNP
rs1473387572 1373 dbSNP
rs972460856 1374 dbSNP
rs969967152 1383 dbSNP
rs1259569138 1384 dbSNP
rs540655708 1386 dbSNP
rs918464317 1392 dbSNP
rs557303875 1393 dbSNP
rs137952266 1394 dbSNP
rs543312911 1396 dbSNP
rs1035534935 1398 dbSNP
rs961228013 1415 dbSNP
rs1327338163 1417 dbSNP
rs1022401358 1418 dbSNP
rs181064108 1427 dbSNP
rs972574189 1436 dbSNP
rs1294183225 1439 dbSNP
rs1363912202 1441 dbSNP
rs1163233111 1442 dbSNP
rs1430672409 1443 dbSNP
rs140445567 1444 dbSNP
rs3839974 1444 dbSNP
rs919709426 1457 dbSNP
rs186408073 1463 dbSNP
rs542833351 1472 dbSNP
rs1426648258 1473 dbSNP
rs985535207 1477 dbSNP
rs1199469007 1479 dbSNP
rs910847731 1484 dbSNP
rs765675463 1485 dbSNP
rs943639101 1492 dbSNP
rs1288979938 1493 dbSNP
rs906519126 1495 dbSNP
rs1040634779 1498 dbSNP
rs749914909 1500 dbSNP
rs1339661083 1501 dbSNP
rs1225773064 1506 dbSNP
rs923509391 1506 dbSNP
rs763304698 1508 dbSNP
rs934871451 1510 dbSNP
rs1312843292 1512 dbSNP
rs1367094067 1515 dbSNP
rs559920017 1517 dbSNP
rs1398979618 1520 dbSNP
rs1052468978 1529 dbSNP
rs1053283754 1530 dbSNP
rs1372405296 1534 dbSNP
rs752705206 1535 dbSNP
rs1011623140 1541 dbSNP
rs1266064418 1543 dbSNP
rs1194322900 1545 dbSNP
rs528573704 1548 dbSNP
rs551818879 1549 dbSNP
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rs905833856 1560 dbSNP
rs531242394 1562 dbSNP
rs550942983 1568 dbSNP
rs1183445935 1578 dbSNP
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rs1443105612 1580 dbSNP
rs1337723772 1582 dbSNP
rs1327161477 1588 dbSNP
rs111586573 1590 dbSNP
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rs1372901566 1605 dbSNP
rs1019722873 1607 dbSNP
rs1002860957 1609 dbSNP
rs1035630987 1613 dbSNP
rs1365163642 1617 dbSNP
rs1179166508 1628 dbSNP
rs1474195399 1630 dbSNP
rs1436896610 1634 dbSNP
rs1205983918 1635 dbSNP
rs972513175 1638 dbSNP
rs897071635 1639 dbSNP
rs764571020 1647 dbSNP
rs78518899 1651 dbSNP
rs567942280 1653 dbSNP
rs1383814483 1665 dbSNP
rs113359210 1668 dbSNP
rs1333488534 1668 dbSNP
rs1491027745 1668 dbSNP
rs397709662 1668 dbSNP
rs58069390 1668 dbSNP
rs60711836 1668 dbSNP
rs747775888 1668 dbSNP
rs796506491 1668 dbSNP
rs1156310836 1669 dbSNP
rs1468899193 1670 dbSNP
rs1385548852 1676 dbSNP
rs952402548 1677 dbSNP
rs1390803544 1678 dbSNP
rs1242943468 1679 dbSNP
rs1435501110 1680 dbSNP
rs200316731 1681 dbSNP
rs5002508 1683 dbSNP
rs141911784 1684 dbSNP
rs1204687996 1685 dbSNP
rs1225442791 1690 dbSNP
rs1026783756 1691 dbSNP
rs1324367608 1696 dbSNP
rs1203176788 1697 dbSNP
rs1247874134 1701 dbSNP
rs565461426 1702 dbSNP
rs1283413294 1709 dbSNP
rs1431303426 1718 dbSNP
rs114397456 1721 dbSNP
rs1418604992 1723 dbSNP
rs1046291822 1724 dbSNP
rs1206266042 1728 dbSNP
rs927993342 1730 dbSNP
rs1261404021 1733 dbSNP
rs1187480719 1734 dbSNP
rs1445644270 1736 dbSNP
rs1476665390 1737 dbSNP
rs1200548106 1742 dbSNP
rs1193003522 1748 dbSNP
rs189588649 1750 dbSNP
rs1294076691 1756 dbSNP
rs1052351784 1761 dbSNP
rs1479814303 1762 dbSNP
rs181521697 1763 dbSNP
rs1341347340 1764 dbSNP
rs1173681242 1770 dbSNP
rs1268393895 1770 dbSNP
rs1413566865 1771 dbSNP
rs1457655266 1781 dbSNP
rs1345551769 1788 dbSNP
rs1017968298 1792 dbSNP
rs1402647142 1795 dbSNP
rs965039380 1802 dbSNP
rs1171554706 1803 dbSNP
rs543402487 1814 dbSNP
rs976387409 1817 dbSNP
rs923560279 1821 dbSNP
rs1382425574 1825 dbSNP
rs1481071159 1832 dbSNP
rs1388368228 1838 dbSNP
rs934881092 1842 dbSNP
rs1197379481 1849 dbSNP
rs1050582985 1862 dbSNP
rs989388133 1863 dbSNP
rs914723707 1866 dbSNP
rs889272557 1876 dbSNP
rs185974129 1884 dbSNP
rs1044583 1887 dbSNP
rs905927012 1892 dbSNP
rs779888369 1893 dbSNP
rs753407181 1901 dbSNP
rs1057146118 1902 dbSNP
rs1284626679 1913 dbSNP
rs1260726402 1924 dbSNP
rs1348972457 1925 dbSNP
rs897079955 1937 dbSNP
rs994058397 1943 dbSNP
rs1298443172 1946 dbSNP
rs1443956434 1946 dbSNP
rs191637973 1948 dbSNP
rs888255709 1950 dbSNP
rs1470556942 1955 dbSNP
rs1432160231 1961 dbSNP
rs1025288864 1965 dbSNP
rs576828043 1968 dbSNP
rs1389488 1977 dbSNP
rs965093634 1982 dbSNP
rs1479782989 1983 dbSNP
rs1023911241 1984 dbSNP
rs1253276613 1995 dbSNP
rs1197838533 1997 dbSNP
rs528610945 2001 dbSNP
rs1030585804 2002 dbSNP
rs1311055564 2003 dbSNP
rs927910646 2005 dbSNP
rs935210041 2006 dbSNP
rs1370743416 2011 dbSNP
rs748120888 2013 dbSNP
rs988114668 2016 dbSNP
rs1362051923 2022 dbSNP
rs956509592 2026 dbSNP
rs1459229872 2027 dbSNP
rs915229944 2039 dbSNP
rs1163581875 2052 dbSNP
rs1364757484 2058 dbSNP
rs1335255108 2059 dbSNP
rs1466006805 2063 dbSNP
rs1345793097 2066 dbSNP
rs946827155 2076 dbSNP
rs989049540 2085 dbSNP
rs1417542044 2087 dbSNP
rs745667537 2089 dbSNP
rs1379989226 2100 dbSNP
rs1177742013 2104 dbSNP
rs1445066724 2116 dbSNP
rs1404502537 2121 dbSNP
rs1244772365 2122 dbSNP
rs1180006348 2124 dbSNP
rs1301528948 2128 dbSNP
rs771846060 2139 dbSNP
rs545474710 2142 dbSNP
rs769709761 2144 dbSNP
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rs1246284567 2155 dbSNP
rs980263034 2156 dbSNP
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rs530854107 2165 dbSNP
rs898100525 2167 dbSNP
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rs1164400005 2176 dbSNP
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rs75285156 2177 dbSNP
rs1025341634 2186 dbSNP
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rs897133743 2211 dbSNP
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rs1258229613 3000 dbSNP
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rs1420629241 4511 dbSNP
rs1423401428 4516 dbSNP
rs936701401 4524 dbSNP
rs1387598878 4525 dbSNP
rs1157297543 4528 dbSNP
rs114983701 4529 dbSNP
rs562232304 4531 dbSNP
rs949349715 4532 dbSNP
rs1189751130 4533 dbSNP
rs1029972926 4535 dbSNP
rs576876761 4538 dbSNP
rs1462609221 4540 dbSNP
rs886353198 4547 dbSNP
rs1488473617 4550 dbSNP
rs1004753111 4554 dbSNP
rs1398795121 4560 dbSNP
rs188530087 4562 dbSNP
rs1014803307 4568 dbSNP
rs540286753 4573 dbSNP
rs1337750293 4580 dbSNP
rs1382515573 4583 dbSNP
rs192906568 4587 dbSNP
rs927238069 4598 dbSNP
rs376955930 4602 dbSNP
rs1328512781 4603 dbSNP
rs532175314 4608 dbSNP
rs1400599927 4609 dbSNP
rs1392161816 4610 dbSNP
rs1459883081 4625 dbSNP
rs1417289959 4627 dbSNP
rs1194600112 4630 dbSNP
rs1226109104 4633 dbSNP
rs1476541776 4638 dbSNP
rs1243603875 4642 dbSNP
rs1190842796 4643 dbSNP
rs995854908 4647 dbSNP
rs1290433911 4658 dbSNP
rs570369775 4662 dbSNP
rs954402294 4663 dbSNP
rs551871723 4685 dbSNP
rs184869543 4691 dbSNP
rs946159556 4692 dbSNP
rs188138553 4704 dbSNP
rs1430390576 4705 dbSNP
rs967332611 4705 dbSNP
rs978289400 4706 dbSNP
rs1332049841 4714 dbSNP
rs559260609 4726 dbSNP
rs1439374223 4728 dbSNP
rs1393804374 4729 dbSNP
rs904723967 4738 dbSNP
rs1411863464 4739 dbSNP
rs1482189518 4741 dbSNP
rs958121214 4748 dbSNP
rs567874064 4750 dbSNP
rs1180320534 4754 dbSNP
rs1195369529 4758 dbSNP
rs990930385 4768 dbSNP
rs534029155 4770 dbSNP
rs936185536 4774 dbSNP
rs1040253368 4783 dbSNP
rs1204680857 4786 dbSNP
rs1264182041 4791 dbSNP
rs916647180 4798 dbSNP
rs751504494 4804 dbSNP
rs34999147 4806 dbSNP
rs900094099 4806 dbSNP
rs998830121 4806 dbSNP
rs1346094808 4813 dbSNP
rs1030023781 4814 dbSNP
rs757132264 4820 dbSNP
rs1332111992 4830 dbSNP
rs1421609702 4830 dbSNP
rs1444395968 4831 dbSNP
rs890121235 4832 dbSNP
rs1415276256 4833 dbSNP
rs1046823122 4834 dbSNP
rs907792604 4839 dbSNP
rs1004667042 4841 dbSNP
rs1394460300 4845 dbSNP
rs940563423 4851 dbSNP
rs1014687400 4854 dbSNP
rs771689021 4857 dbSNP
rs1177794014 4861 dbSNP
rs1203351650 4866 dbSNP
rs772734089 4875 dbSNP
rs547529313 4879 dbSNP
rs1282908337 4881 dbSNP
rs1446358840 4881 dbSNP
rs1347627191 4898 dbSNP
rs899034218 4905 dbSNP
rs1290246106 4910 dbSNP
rs995948136 4912 dbSNP
rs781067030 4913 dbSNP
rs890197725 4914 dbSNP
rs1008574033 4916 dbSNP
rs12298732 4929 dbSNP
rs1325073323 4935 dbSNP
rs1337870692 4935 dbSNP
rs917288058 4938 dbSNP
rs1262491605 4939 dbSNP
rs191365081 4941 dbSNP
rs556258257 4947 dbSNP
rs1261128174 4955 dbSNP
rs77701788 4956 dbSNP
rs1176193779 4957 dbSNP
rs1475324366 4961 dbSNP
rs926078548 4962 dbSNP
rs1185354084 4965 dbSNP
rs1485526224 4969 dbSNP
rs1261697986 4970 dbSNP
rs936053935 4975 dbSNP
rs1261036978 4985 dbSNP
rs1315702652 4991 dbSNP
rs1283639865 4993 dbSNP
rs1234038344 4996 dbSNP
rs780184740 4997 dbSNP
rs1414421859 5006 dbSNP
rs1354564621 5007 dbSNP
rs921413133 5008 dbSNP
rs1455280346 5010 dbSNP
rs1481498562 5010 dbSNP
rs1200768088 5014 dbSNP
rs1158311525 5019 dbSNP
rs1343422790 5019 dbSNP
rs1461449107 5019 dbSNP
rs1419429446 5024 dbSNP
rs1162284051 5026 dbSNP
rs559317679 5033 dbSNP
rs1262829473 5034 dbSNP
rs1485168777 5036 dbSNP
rs73360983 5036 dbSNP
rs1241984213 5045 dbSNP
rs1214864216 5047 dbSNP
rs1336982514 5060 dbSNP
rs1161668791 5085 dbSNP
rs990981312 5089 dbSNP
rs1308374849 5095 dbSNP
rs1296011781 5096 dbSNP
rs1023759574 5103 dbSNP
rs749505217 5104 dbSNP
rs1418644775 5105 dbSNP
rs1441573983 5112 dbSNP
rs1396002713 5113 dbSNP
rs1162220549 5117 dbSNP
rs1460590069 5130 dbSNP
rs1373347854 5133 dbSNP
rs572724665 5144 dbSNP
rs556002243 5151 dbSNP
rs1036417731 5153 dbSNP
rs572725970 5154 dbSNP
rs982135904 5155 dbSNP
rs542174880 5165 dbSNP
rs75857217 5169 dbSNP
rs1251216140 5170 dbSNP
rs1034211633 5171 dbSNP
rs1481008115 5185 dbSNP
rs1365361208 5187 dbSNP
rs1014159732 5194 dbSNP
rs958783630 5194 dbSNP
rs1296658014 5203 dbSNP
rs1373184823 5204 dbSNP
rs59815789 5204 dbSNP
rs545804287 5205 dbSNP
rs1284628940 5208 dbSNP
rs967243083 5212 dbSNP
rs1385672997 5214 dbSNP
rs772409590 5215 dbSNP
rs977405063 5220 dbSNP
rs1316129569 5223 dbSNP
rs1354283408 5230 dbSNP
rs1216160433 5233 dbSNP
rs1174735950 5239 dbSNP
rs1455959341 5239 dbSNP
rs1050184144 5241 dbSNP
rs1393748095 5242 dbSNP
rs150217292 5251 dbSNP
rs376530700 5251 dbSNP
rs1419710326 5252 dbSNP
rs957500051 5254 dbSNP
rs1223375411 5257 dbSNP
rs1194274433 5261 dbSNP
rs2605378 5266 dbSNP
rs921475673 5267 dbSNP
rs17180010 5277 dbSNP
rs1179466595 5286 dbSNP
rs139806885 5289 dbSNP
rs902874973 5292 dbSNP
rs999843891 5296 dbSNP
rs1367093713 5298 dbSNP
rs1389321117 5298 dbSNP
rs1369628768 5299 dbSNP
rs1032632500 5304 dbSNP
rs908815194 5305 dbSNP
rs561642252 5309 dbSNP
rs75447283 5318 dbSNP
rs1436899498 5322 dbSNP
rs527521037 5325 dbSNP
rs1374061454 5329 dbSNP
rs547171708 5330 dbSNP
rs115122140 5336 dbSNP
rs1365574864 5337 dbSNP
rs1418706449 5338 dbSNP
rs898808982 5346 dbSNP
rs1190333328 5350 dbSNP
rs1347629771 5355 dbSNP
rs1444218634 5356 dbSNP
rs1277948671 5358 dbSNP
rs1199778494 5361 dbSNP
rs1351400750 5363 dbSNP
rs1280134892 5367 dbSNP
rs539517135 5369 dbSNP
rs982635066 5376 dbSNP
rs145585426 5377 dbSNP
rs1353931664 5385 dbSNP
rs1333966543 5387 dbSNP
rs1024063291 5389 dbSNP
rs1387847116 5394 dbSNP
rs1157353485 5395 dbSNP
rs535849087 5401 dbSNP
rs1456707472 5402 dbSNP
rs1418697932 5409 dbSNP
rs962393826 5426 dbSNP
rs973369231 5428 dbSNP
rs998709424 5433 dbSNP
rs17113736 5435 dbSNP
rs1361794120 5441 dbSNP
rs957591473 5442 dbSNP
rs931862909 5446 dbSNP
rs1229114045 5450 dbSNP
rs975403228 5456 dbSNP
rs1289154312 5461 dbSNP
rs1450007709 5462 dbSNP
rs1207224050 5464 dbSNP
rs985947180 5468 dbSNP
rs572760683 5469 dbSNP
rs1332308458 5472 dbSNP
rs1283958606 5477 dbSNP
rs535262629 5481 dbSNP
rs955420476 5487 dbSNP
rs558042408 5488 dbSNP
rs1435037499 5491 dbSNP
rs1177114326 5497 dbSNP
rs576886156 5502 dbSNP
rs1328087586 5507 dbSNP
rs935684557 5509 dbSNP
rs545539178 5521 dbSNP
rs1460064053 5529 dbSNP
rs1054089150 5539 dbSNP
rs761799209 5541 dbSNP
rs940281134 5547 dbSNP
rs12825867 5550 dbSNP
rs1168723478 5551 dbSNP
rs974729092 5552 dbSNP
rs1162292000 5553 dbSNP
rs1012480592 5561 dbSNP
rs1023821908 5563 dbSNP
rs1464421333 5570 dbSNP
rs139659446 5572 dbSNP
rs1003712804 5573 dbSNP
rs1015456847 5580 dbSNP
rs962120003 5585 dbSNP
rs994802417 5586 dbSNP
rs775073545 5587 dbSNP
rs1268834619 5605 dbSNP
rs1399514729 5607 dbSNP
rs532654532 5612 dbSNP
rs953311392 5622 dbSNP
rs1444515399 5623 dbSNP
rs1438725033 5624 dbSNP
rs986042035 5634 dbSNP
rs903021023 5636 dbSNP
rs1338389406 5647 dbSNP
rs1383261767 5648 dbSNP
rs1398328840 5658 dbSNP
rs575677131 5659 dbSNP
rs1166552855 5661 dbSNP
rs1448777908 5664 dbSNP
rs1395548092 5665 dbSNP
rs1195428505 5667 dbSNP
rs541412639 5671 dbSNP
rs1476730491 5674 dbSNP
rs1245644394 5675 dbSNP
rs2252250 5682 dbSNP
rs1439232733 5688 dbSNP
rs1272919820 5689 dbSNP
rs966308048 5698 dbSNP
rs1204817027 5702 dbSNP
rs145296973 5703 dbSNP
rs183884168 5705 dbSNP
rs1306224089 5706 dbSNP
rs1354306467 5708 dbSNP
rs924363563 5708 dbSNP
rs893011936 5714 dbSNP
rs997270517 5719 dbSNP
rs1258828401 5720 dbSNP
rs1028301710 5734 dbSNP
rs751024851 5748 dbSNP
rs1307670914 5752 dbSNP
rs1428790711 5752 dbSNP
rs1375870506 5760 dbSNP
rs1054139261 5764 dbSNP
rs1423815422 5766 dbSNP
rs564087303 5769 dbSNP
rs533472435 5770 dbSNP
rs2641468 5773 dbSNP
rs1045767990 5774 dbSNP
rs1181055428 5775 dbSNP
rs756396001 5780 dbSNP
rs906776845 5781 dbSNP
rs961531240 5782 dbSNP
rs1208602593 5783 dbSNP
rs1186386072 5788 dbSNP
rs974235041 5791 dbSNP
rs1285027391 5810 dbSNP
rs1235432106 5813 dbSNP
rs1348633388 5813 dbSNP
rs10879804 5814 dbSNP
rs938247669 5816 dbSNP
rs991591495 5820 dbSNP
rs1167951368 5824 dbSNP
rs915557761 5826 dbSNP
rs1358450416 5829 dbSNP
rs1422304466 5839 dbSNP
rs1463937433 5840 dbSNP
rs1036495159 5844 dbSNP
rs949841376 5846 dbSNP
rs1260051039 5853 dbSNP
rs2613895 5863 dbSNP
rs1243130298 5865 dbSNP
rs994854157 5872 dbSNP
rs1218591245 5877 dbSNP
rs902904920 5878 dbSNP
rs549377790 5879 dbSNP
rs1234096083 5890 dbSNP
rs1333713407 5892 dbSNP
rs1338881647 5893 dbSNP
rs1314590985 5899 dbSNP
rs1226335575 5901 dbSNP
rs5799168 5912 dbSNP
rs796493557 5912 dbSNP
rs199790604 5913 dbSNP
rs1289326335 5914 dbSNP
rs953401475 5917 dbSNP
rs1007511442 5923 dbSNP
rs1319384899 5924 dbSNP
rs1461629762 5929 dbSNP
rs754901006 5931 dbSNP
rs147629955 5940 dbSNP
rs1265609987 5941 dbSNP
rs1346124313 5944 dbSNP
rs1423556418 5950 dbSNP
rs531853951 5955 dbSNP
rs1420691654 5957 dbSNP
rs996765321 5962 dbSNP
rs1463965840 5969 dbSNP
rs965952646 5972 dbSNP
rs1214458362 5973 dbSNP
rs1276990184 5975 dbSNP
rs977660596 5991 dbSNP
rs779890949 5993 dbSNP
rs1049782352 5994 dbSNP
rs1448324426 6002 dbSNP
rs1320865977 6003 dbSNP
rs957120767 6004 dbSNP
rs1193936514 6010 dbSNP
rs535300416 6015 dbSNP
rs1296801997 6017 dbSNP
rs1440914335 6017 dbSNP
rs1396066743 6019 dbSNP
rs1291376501 6022 dbSNP
rs188361525 6023 dbSNP
rs891132381 6031 dbSNP
rs1355447086 6037 dbSNP
rs1476587748 6038 dbSNP
rs1201473987 6040 dbSNP
rs1429951151 6054 dbSNP
rs1448188979 6055 dbSNP
rs1465508580 6058 dbSNP
rs1008351015 6060 dbSNP
rs915661924 6061 dbSNP
rs2061579 6070 dbSNP
rs141975780 6076 dbSNP
rs181818367 6081 dbSNP
rs562169326 6088 dbSNP
rs939597706 6092 dbSNP
rs570925187 6093 dbSNP
rs1339806771 6095 dbSNP
rs1398281379 6095 dbSNP
rs1234954743 6102 dbSNP
rs17113745 6110 dbSNP
rs959912517 6111 dbSNP
rs1385871046 6113 dbSNP
rs1373677258 6114 dbSNP
rs139663397 6119 dbSNP
rs779155137 6122 dbSNP
rs1370361276 6125 dbSNP
rs1437168109 6130 dbSNP
rs748198191 6131 dbSNP
rs1198324667 6139 dbSNP
rs772169709 6141 dbSNP
rs778203266 6145 dbSNP
rs1252849311 6156 dbSNP
rs994949356 6162 dbSNP
rs1180327945 6172 dbSNP
rs1481921074 6176 dbSNP
rs1049172157 6179 dbSNP
rs746603374 6187 dbSNP
rs372389502 6194 dbSNP
rs981031592 6200 dbSNP
rs1353373616 6202 dbSNP
rs185585484 6204 dbSNP
rs1316990823 6207 dbSNP
rs934396599 6209 dbSNP
rs1284927082 6215 dbSNP
rs1054726431 6220 dbSNP
rs1313943029 6228 dbSNP
rs1224015445 6229 dbSNP
rs1018907316 6239 dbSNP
rs564406080 6240 dbSNP
rs1432465108 6247 dbSNP
rs998753950 6254 dbSNP
rs1400623671 6262 dbSNP
rs1172512159 6264 dbSNP
rs747548518 6271 dbSNP
rs533022137 6277 dbSNP
rs1414304215 6280 dbSNP
rs1157184719 6285 dbSNP
rs190061343 6286 dbSNP
rs1049667439 6288 dbSNP
rs1188461496 6294 dbSNP
rs1196674637 6295 dbSNP
rs1443940410 6297 dbSNP
rs891014399 6299 dbSNP
rs1008236408 6300 dbSNP
rs1037012395 6310 dbSNP
rs1269518995 6311 dbSNP
rs1226185561 6312 dbSNP
rs957230664 6313 dbSNP
rs1328126971 6314 dbSNP
rs897260069 6315 dbSNP
rs774140031 6322 dbSNP
rs995584333 6341 dbSNP
rs1027605357 6343 dbSNP
rs1339113638 6345 dbSNP
rs1334025361 6350 dbSNP
rs563801436 6354 dbSNP
rs1025181099 6356 dbSNP
rs970928562 6359 dbSNP
rs529379295 6361 dbSNP
rs549414564 6364 dbSNP
rs776925116 6365 dbSNP
rs1418135636 6366 dbSNP
rs1473632460 6367 dbSNP
rs181908821 6379 dbSNP
rs956008454 6382 dbSNP
rs1429118049 6385 dbSNP
rs528798004 6393 dbSNP
rs1249331957 6402 dbSNP
rs989915850 6407 dbSNP
rs770594752 6408 dbSNP
rs1273385640 6412 dbSNP
rs1211285018 6418 dbSNP
rs1322207172 6420 dbSNP
rs1284011290 6423 dbSNP
rs1228782082 6425 dbSNP
rs932509827 6426 dbSNP
rs1241373648 6431 dbSNP
rs1296063080 6435 dbSNP
rs1309026867 6439 dbSNP
rs981534718 6440 dbSNP
rs551832664 6447 dbSNP
rs1325749023 6457 dbSNP
rs1247733270 6470 dbSNP
rs928294144 6483 dbSNP
rs939672193 6488 dbSNP
rs572831137 6490 dbSNP
rs186495423 6491 dbSNP
rs73190472 6499 dbSNP
rs1186632361 6502 dbSNP
rs1448302360 6503 dbSNP
rs1207976176 6509 dbSNP
rs190241696 6510 dbSNP
rs1200508844 6513 dbSNP
rs1289595090 6515 dbSNP
rs1458025153 6515 dbSNP
rs1049184000 6517 dbSNP
rs889199282 6518 dbSNP
rs768261447 6529 dbSNP
rs56236307 6531 dbSNP
rs1040789998 6546 dbSNP
rs901872095 6547 dbSNP
rs570407649 6550 dbSNP
rs1167251614 6551 dbSNP
rs1276756415 6558 dbSNP
rs76744364 6570 dbSNP
rs1048480319 6572 dbSNP
rs895180297 6573 dbSNP
rs1031628377 6578 dbSNP
rs571757945 6582 dbSNP
rs1329800185 6586 dbSNP
rs893024695 6587 dbSNP
rs1372206256 6589 dbSNP
rs1166613488 6592 dbSNP
rs1399209381 6593 dbSNP
rs1448194865 6595 dbSNP
rs1025067832 6597 dbSNP
rs1331030583 6599 dbSNP
rs1488028898 6606 dbSNP
rs1173875328 6608 dbSNP
rs1011418689 6621 dbSNP
rs1454244270 6624 dbSNP
rs1313063307 6632 dbSNP
rs1022781813 6638 dbSNP
rs541014979 6639 dbSNP
rs1031794918 6640 dbSNP
rs1242031531 6645 dbSNP
rs1250117238 6648 dbSNP
rs1252591050 6651 dbSNP
rs377729784 6657 dbSNP
rs369352694 6671 dbSNP
rs1035831578 6673 dbSNP
rs1021377432 6674 dbSNP
rs769079544 6684 dbSNP
rs1217483313 6694 dbSNP
rs953752880 6699 dbSNP
rs961112684 6701 dbSNP
rs985305096 6702 dbSNP
rs1462530630 6706 dbSNP
rs1183792942 6712 dbSNP
rs912380265 6713 dbSNP
rs1257169751 6716 dbSNP
rs943974114 6716 dbSNP
rs539086348 6717 dbSNP
rs918465386 6721 dbSNP
rs373627923 6729 dbSNP
rs1423881170 6735 dbSNP
rs557803218 6746 dbSNP
rs1162710054 6751 dbSNP
rs919515456 6756 dbSNP
rs930855962 6765 dbSNP
rs984941601 6770 dbSNP
rs1473408191 6771 dbSNP
rs1425888880 6773 dbSNP
rs1466538172 6774 dbSNP
rs1048847986 6779 dbSNP
rs2613896 6780 dbSNP
rs1181840924 6781 dbSNP
rs543276130 6782 dbSNP
rs948123935 6783 dbSNP
rs79290689 6797 dbSNP
rs1040484924 6800 dbSNP
rs1303034769 6802 dbSNP
rs774829593 6803 dbSNP
rs529414572 6807 dbSNP
rs1441898249 6812 dbSNP
rs543096638 6816 dbSNP
rs767037563 6822 dbSNP
rs1327408747 6826 dbSNP
rs1031262413 6829 dbSNP
rs7132047 6833 dbSNP
rs865849117 6835 dbSNP
rs1445795483 6843 dbSNP
rs893078439 6844 dbSNP
rs528517296 6857 dbSNP
rs953804995 6858 dbSNP
rs535196181 6861 dbSNP
rs1158008244 6862 dbSNP
rs1011472952 6864 dbSNP
rs767467310 6877 dbSNP
rs1044324875 6879 dbSNP
rs1180595766 6887 dbSNP
rs1325374658 6896 dbSNP
rs965215444 6900 dbSNP
rs180771026 6916 dbSNP
rs1255215737 6917 dbSNP
rs1483014913 6918 dbSNP
rs1210604121 6921 dbSNP
rs1463601804 6923 dbSNP
rs2605377 6926 dbSNP
rs1035476894 6927 dbSNP
rs961381123 6932 dbSNP
rs993795855 6936 dbSNP
rs1193550457 6937 dbSNP
rs1226522909 6937 dbSNP
rs1422159847 6945 dbSNP
rs1435456259 6947 dbSNP
rs916561602 6958 dbSNP
rs1177185095 6959 dbSNP
rs1362434343 6960 dbSNP
rs1319447860 6973 dbSNP
rs116802784 6974 dbSNP
rs184979396 6975 dbSNP
rs753636998 6977 dbSNP
rs1405152408 6981 dbSNP
rs1464174764 6985 dbSNP
rs1299731823 6988 dbSNP
rs1191087205 6990 dbSNP
rs1360577063 6991 dbSNP
rs910776495 6993 dbSNP
rs10506696 6995 dbSNP
rs1247546278 6998 dbSNP
rs1053010473 7005 dbSNP
rs536446323 7007 dbSNP
rs1263915579 7011 dbSNP
rs1219031546 7013 dbSNP
rs1358506291 7015 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cggacguaguacuuuaCGGGAGc 5'
                          |||||| 
Target 5' ----------------GCCCUCa 3'
 		1 - 7
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 552889.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cggacguaguacuuuACGGGAGc 5'
                         ||||||| 
Target 5' -------------gcUGCCCUCa 3'
 		1 - 10
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions TZM-bl
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462574. RNA binding protein: AGO2. Condition:TZM-bl ami BaL ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
Experimental Support 4 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions MCF7
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated ...

- Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology.

Article - Farazi TA; Ten Hoeve JJ; Brown M; et al.
- Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
Experimental Support 5 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HCT116
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in ERX177599. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_2_1 PAR-CLIP data was present in ERX177611. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_3_1 PAR-CLIP data was present in ERX177623. RNA binding protein: AGO2. Condition:p53_D_AGO_CLIP_4_1 ...

- Krell J; Stebbing J; Carissimi C; Dabrowska et al., 2016, Genome research.

Article - Krell J; Stebbing J; Carissimi C; Dabrowska et al.
- Genome research, 2016
DNA damage activates TP53-regulated surveillance mechanisms that are crucial in suppressing tumorigenesis. TP53 orchestrates these responses directly by transcriptionally modulating genes, including microRNAs (miRNAs), and by regulating miRNA biogenesis through interacting with the DROSHA complex. However, whether the association between miRNAs and AGO2 is regulated following DNA damage is not yet known. Here, we show that, following DNA damage, TP53 interacts with AGO2 to induce or reduce AGO2's association of a subset of miRNAs, including multiple let-7 family members. Furthermore, we show that specific mutations in TP53 decrease rather than increase the association of let-7 family miRNAs, reducing their activity without preventing TP53 from interacting with AGO2. This is consistent with the oncogenic properties of these mutants. Using AGO2 RIP-seq and PAR-CLIP-seq, we show that the DNA damage-induced increase in binding of let-7 family members to the RISC complex is functional. We unambiguously determine the global miRNA-mRNA interaction networks involved in the DNA damage response, validating them through the identification of miRNA-target chimeras formed by endogenous ligation reactions. We find that the target complementary region of the let-7 seed tends to have highly fixed positions and more variable ones. Additionally, we observe that miRNAs, whose cellular abundance or differential association with AGO2 is regulated by TP53, are involved in an intricate network of regulatory feedback and feedforward circuits. TP53-mediated regulation of AGO2-miRNA interaction represents a new mechanism of miRNA regulation in carcinogenesis.
LinkOut: [PMID: 26701625]
CLIP-seq Support 1 for dataset GSM4903825
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID14_NS
Location of target site NM_001136262 | 3UTR | AUUUGGCUGAGCAGAGCCCUCUUCCUUGCCCUCCAACCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161237
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903825
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / PID14_NS
Location of target site NM_001136262 | 3UTR | GG