pre-miRNA Information | |
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pre-miRNA | hsa-mir-144 |
Genomic Coordinates | chr17: 28861533 - 28861618 |
Description | Homo sapiens miR-144 stem-loop |
Comment | This miRNA sequence is predicted based on homology to a verified miRNA from mouse . |
RNA Secondary Structure | |
Associated Diseases |
Mature miRNA Information | ||||||||||||||||||||||
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Mature miRNA | hsa-miR-144-3p | |||||||||||||||||||||
Sequence | 52| UACAGUAUAGAUGAUGUACU |71 | |||||||||||||||||||||
Evidence | Experimental | |||||||||||||||||||||
Experiments | Cloned | |||||||||||||||||||||
SNPs in miRNA |
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Putative Targets |
miRNA Expression profile | |
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Human miRNA Tissue Atlas | |
miRNAs in Extracellular Vesicles |
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Circulating MicroRNA Expression Profiling |
Gene Information | |||||||||||||||||||||
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Gene Symbol | TMTC3 | ||||||||||||||||||||
Synonyms | LIS8, SMILE | ||||||||||||||||||||
Description | transmembrane and tetratricopeptide repeat containing 3 | ||||||||||||||||||||
Transcript | NM_181783 | ||||||||||||||||||||
Expression | |||||||||||||||||||||
Putative miRNA Targets on TMTC3 | |||||||||||||||||||||
3'UTR of TMTC3 (miRNA target sites are highlighted) |
>TMTC3|NM_181783|3'UTR 1 CATTAATATTTATCGTGACAATGGTATCAAAGAACATCAATCCGTATCATGTGATTGCTTTTACTGGGAGCTTTGAAAAA 81 AAGTTCAAGGGTTCCTAATGGTCAATCATGAGCTGCCTTGAAGTAGGATCAAAATAAGATTTTCATTAAAGACCTGTATT 161 ATCCCAGGATGTATATTATGTATCGCTGTTTTCAGAGTGTGGGTGAATATAGCAGAAATATTACAGCGGAAGTGACAAAT 241 TTACAACTTTTATTATAGAAAGAAGGTGTTTCTGGCAATGTAATCTTTACTGCTCTCAATTAAAAATAATTTTGAGGCCT 321 GAATGATAATCCCTTGAGGACAAATCCAACATGTGCTGGTTTATTCTGTTAATTCCCATTTATTTGCCTACTTCATTTTT 401 CTTGCACCTCTTAGAATCTAACTATGAATTGAAAACACTTAAGTAATTCTGTTTAATCAAGGGATTTACACTACAAAAGA 481 ATGCTGGCTTTTTTTATGTTGTATTCCTTAGTTGAGTTTTAGAAGGAATGCTTGATGAAACATTTTAAAATAAGTCATGA 561 CATGTTAGCTTGAGAATGTATTTTCATAATTGTATACTTGTTTTTAACTTTAAATGTAATTTTTAATCAGGTAAAGTTTG 641 ACACATGTATAGCTACATACACACATTTTTAATGGTGCTCATATATACTGTATTTTTTGTTGTTTAGTTTTACTTATTGA 721 GAGTGTCACAACATGAATCACATAATCATGATTTTTTTTTTTTACTTTTACTCCCCAAATTATTCATGTTTCTTAGATCG 801 TAGTCATTGAGAAGTCCCAATAACTCTAAACTTTTGAGTTATAACGTAGTAAACTTCTCTTTCATCTTTGTGTTAGCTCT 881 GTAGTCTTAACCTGGATTTTAATTTTTTTGTTTCCAAAGTCACAATTGAATTATTCTTAGATACCTTAAGCCACTGAATT 961 CAGTTCTGTTTGACTGAAAGCAAAACAACGTGACAGTTTATTTTCAAACACTAACTTCTTGATATTTTGTTATGGTATAT 1041 CTTTTTATTAAATATTTATTTTGACTAAGCTTTCATAAAATATTTGAAGCTATTTTAATCATCAAGTATGGAAAACAAAT 1121 TACTATTGCATTTTCCTATATATGCATATATTATGGATTAACCAGAATTGTATCATTTTTGGCCTAATGTCTGGATATAA 1201 AAGATAATTAGCCTACTATAGTATTAATAAATTTTTCAGTTGGTTTGGGCAAATTTAAACCTGAAAAATAGGTTAAAAAG 1281 TAGTTACAAATTAAACTTACTAATTTATACCTGATTTTTTTTCTTGAATTAAAGTACATTTTAAATGAGCTTTATAATAC 1361 CTTAAAAAGTTGGTTCTAATTTAAAATATGAAAGCTCTGGCTATCATCCTGGGATAGTAATTTCTAATTATATAGTATTT 1441 CAAAACTATATATTTTTTAGTTCCTTTGAGATAACTAATTTCTAATTATATATGTTTCAAAAACCATATCCTGTATTTTT 1521 TTTAAGAATTGTTTTATAAATAGGTCATAAGATACAAGGTCTGCATTAGAAGACCCACTCTTACTAGGTTCCCTAAGGAT 1601 CTGCCATAGATTTTTTTTTTTTTTTTTTTTTTTTTAGGTAGTTTAAAGCAAGCACTGATACCAGTGGGAGTTGGTCTTGA 1681 TCTAGGAGATTCTGTTAAGCATCCAAAAACAATGCCTAATTTCAGTTCTTAGGTTATGGCTTGTGACTCCAGATAAAAGA 1761 TGGAGAATACCTCATGTACTGTGACTTGAAAATGAATTCTTAAAATTCTTAGGCTCTCTCCATGTATCTTTCTTAAGGAA 1841 AAGTTTCTGAGTGTGATCTCTCTTTTGCCATAGTATCAAGTGGAGGGTAGTTCAGAAAAGTTAATAGGAAATCTTTTGTG 1921 ACAGCAGACTATAATAGAAGTTTGAGTAATATTTTAATAAATTTATATAATTCAAATGATAAAAATGTATCAATGTTATC 2001 CAATGATTTTTATTAAAAAATTACCTTATTATTAGAACTGTGCCTATTACATAAAAAGTGCTCATGTATTTGAATTTTAA 2081 ATAATTTATTTAAATCAAGACCACCATAAGTCATTAATAATTTAATAATTGTTTTAAATCAGTGGTTTTCAACCCTCACT 2161 TCATATTAGAATCATCTGAGGACTTTTAATATGGAATCCACCTCATAACAATTAAGTCTAAATTTCTGGAAGATGGAGCC 2241 ATGCTTGTTTTTCCAAAAGCTCTTTGAGTGATTCTAATTTGTAGTCAGAGTTGAAGACCACTGCTCTAAATTAGTGCAGG 2321 AAAATGCTTTTATTTCTCCCATGTTAACTTTTAAAACTAGTAATGTACCCAGTTAAGTTTTGATGGTTTAAATTCCACTA 2401 AAGAACATATTCTTCTAATAACTAGCATTTATTACATGAAATTTAAGAGTTTAAGTTCCATCAAACTAGCCCTTGTGTAA 2481 GATTATTATTTCTTCTCTATAACTTCAAAATAGATATTTCATTCAAACTGTTCAGGTGAGAAAACATAATGGATTTTTTT 2561 TTTTTTCCTCTGGAGCTGCCTGTTCAGTGAGATGGAGGAGGTGGGCACATTTAAGGTCAGTTCACTAACCTATGGTTCAG 2641 AGTTCTGATCATATGGAAGTTTGGAAAAGAGAGCTTATCACAGGTTTGTATGCTGGTGAATGGATAGTTTTAATTCTCAC 2721 TGTCTCAAAAGAGAATCAGCTCTCCAGCAGTTCTAGAAAAGCTTTGACAATCCCCAAGGGGCAGTGTTACCTTACTCCTT 2801 CACTGCTTCTTAGAAGGTAGAATTAAGTTTCTGGAATTGCACCTACATGTTTTCTTATTAACATTCAGAATTGGGAATAT 2881 TAATTTTTCCAGTGAGTAGTTTTCTGAAATTGGTAACTTGGAGAGTAAAATAACGTATTTTGCTTTTCAATTTTGTGTTT 2961 GTTTACTTTTATGTAAAAATTTGATATGTGAATTACACAGTTCTAATAAAACCTCATGCCTTTTCATTACATCTAATTTG 3041 AACTCTCAACTTCATGTTACAGAATGCTTTAAAGATGCTTTAATGAAAAGTATTAAGAAAATATATAGATTTGTATGTCA 3121 GTTTATACTTCAGAAATCCATATATTTGTCATATTTATTTTTTTAGAAACCTCCTAATTGGATAACTAGATGGTATTTAA 3201 AATGAATGCCCAAAAATATCTTGTACCTTTGTCCAAAAGTTTATCTGTTGGAAGCCGCCAGCCATTCATGTAGAGAGTTT 3281 ATAAGAAAATAATTTAAAATTGTATGCATTTTATATTACTATGGTATCTGTGTACCATATTTCTAAGTATTCATTATTAA 3361 ATTGGTACTTCTTAAAACCATAACCTGGCTTGCCTTTTAGTGTTAAAAAAATACAACATTGTATATAGAGATTTCTTTTA 3441 TGAAGAAGAGCTGACGTAATTTATTAGCAGTGATCTGAGAAAGACATTAAATAAGTTTCTGAGAGTGATACATTTTCAAA 3521 CATGAGGAGTGACAACCACCAAATTAAGAAAAGGAAACAACTCAGACTTGGAATTTTATACGAATTTCATTTCTATATGT 3601 GCCTGGTATTGCCTCTGGCATAACTTAGAGGAAATTGTTCTACCTATATGTCCTCAGTTTCTTCATCTACAAGTTGGGAA 3681 AAACATTTTCCTCTTAAAATTGTGAAGAGGATTTATATATTTATATGATATATTGTATATATTAATATATTTAAATTGCT 3761 TAGAGTTTCTAGCACATAGCAAATAATAAATATTAGTTATTAGTATAAACATAAGGCTTAAAGTCTTGGATTTGATGCAT 3841 ATGACTTAATTTGTATTTGTGCTAGTAGCTGTAATGTCAGTGACAGGATAACAAGCAAATGATTAGAAATCTAATAGTAA 3921 TGCTTGTTCCTTTGCTATCTATGCTAACAAGTACATAGATAGCCTAAGATAAATTATACTTAGGATGAAGCTAAAATGCA 4001 TAACTGAGACACCTTAAAATTGTACTACCTTGTGCTGTTCACTGCCATCAGGGAGGTAGCATAAAATGAAAGATAAAGTC 4081 TGAAGACTGGATCCAGGCAAATTCATGTTCTTTCTTTGTAACTCACTTTCTTCGTCAACATTTCTGTGACTCAATGGATA 4161 GCATATTTCCATCAAGTAGCACGTATAACGTGATGCTTTCATGTTTCTGCCTTAAATAAAATAACCCTCAAAAAACCA Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
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miRNA-target interactions (Predicted by miRanda) |
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DRVs in gene 3'UTRs | |||||||||||||||||||||
SNPs in gene 3'UTRs |
Experimental Support 1 for Functional miRNA-Target Interaction | |||||||
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miRNA:Target | ---- | ||||||
Validation Method |
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Conditions | HEK293 | ||||||
Location of target site | 3'UTR | ||||||
Tools used in this research | TargetScan , miRTarCLIP , Piranha | ||||||
Original Description (Extracted from the article) |
...
PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control
... - Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell. |
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miRNA-target interactions (Provided by authors) |
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Article |
- Hafner M; Landthaler M; Burger L; Khorshid et al. - Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
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Experimental Support 2 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293 |
Disease | 160418.0 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
"PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1
"PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1
... - Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods. |
Article |
- Kishore S; Jaskiewicz L; Burger L; Hausser et al. - Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
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CLIP-seq Support 1 for dataset GSM545212 | |
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Method / RBP | PAR-CLIP / AGO1 |
Cell line / Condition | HEK293 / Control |
Location of target site | ENST00000266712.6 | 3UTR | CACACAUUUUUAAUGGUGCUCAUAUAUACUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 20371350 / GSE21578 |
CLIP-seq Viewer | Link |
CLIP-seq Support 2 for dataset GSM714644 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | HEK293 / completeT1, repA |
Location of target site | ENST00000266712.6 | 3UTR | GCUACAUACACACAUUUUUAAUGGUGCUCAUAUAUACUGU |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 21572407 / GSE28865 |
CLIP-seq Viewer | Link |
CLIP-seq Support 3 for dataset GSM714645 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | HEK293 / completeT1, repB |
Location of target site | ENST00000266712.6 | 3UTR | CUACAUACACACAUUUUUAAUGGUGCUCAUAUAUACUG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 21572407 / GSE28865 |
CLIP-seq Viewer | Link |
MiRNA-Target Expression Profile | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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MiRNA-Target Expression Profile (TCGA) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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204 hsa-miR-144-3p Target Genes:
Functional analysis:
ID | Target | Description | Validation methods | |||||||||
Strong evidence | Less strong evidence | |||||||||||
MIRT003058 | PLAG1 | PLAG1 zinc finger | 2 | 1 | ||||||||
MIRT005523 | FGG | fibrinogen gamma chain | 2 | 1 | ||||||||
MIRT005529 | FGA | fibrinogen alpha chain | 2 | 1 | ||||||||
MIRT005530 | FGB | fibrinogen beta chain | 2 | 1 | ||||||||
MIRT005869 | NOTCH1 | notch 1 | 4 | 2 | ||||||||
MIRT006114 | TGFB1 | transforming growth factor beta 1 | 4 | 1 | ||||||||
MIRT006872 | MTOR | mechanistic target of rapamycin kinase | 7 | 3 | ||||||||
MIRT007190 | PTEN | phosphatase and tensin homolog | 3 | 1 | ||||||||
MIRT007310 | NFE2L2 | nuclear factor, erythroid 2 like 2 | 1 | 1 | ||||||||
MIRT053494 | ZFX | zinc finger protein, X-linked | 6 | 5 | ||||||||
MIRT054058 | CFTR | cystic fibrosis transmembrane conductance regulator | 2 | 1 | ||||||||
MIRT054851 | TTN | titin | 3 | 1 | ||||||||
MIRT057677 | LCOR | ligand dependent nuclear receptor corepressor | 2 | 8 | ||||||||
MIRT065418 | TMBIM6 | transmembrane BAX inhibitor motif containing 6 | 2 | 4 | ||||||||
MIRT066720 | CCT2 | chaperonin containing TCP1 subunit 2 | 2 | 6 | ||||||||
MIRT066784 | ARID1A | AT-rich interaction domain 1A | 2 | 2 | ||||||||
MIRT067387 | TMTC3 | transmembrane and tetratricopeptide repeat containing 3 | 2 | 4 | ||||||||
MIRT068846 | FNDC3A | fibronectin type III domain containing 3A | 2 | 2 | ||||||||
MIRT069645 | BCL2L2-PABPN1 | BCL2L2-PABPN1 readthrough | 2 | 2 | ||||||||
MIRT069657 | PABPN1 | poly(A) binding protein nuclear 1 | 2 | 2 | ||||||||
MIRT071717 | CCNK | cyclin K | 2 | 2 | ||||||||
MIRT073564 | NR2F2 | nuclear receptor subfamily 2 group F member 2 | 2 | 4 | ||||||||
MIRT080720 | ZCCHC2 | zinc finger CCHC-type containing 2 | 2 | 4 | ||||||||
MIRT090617 | PLS1 | plastin 1 | 2 | 2 | ||||||||
MIRT097062 | TNPO1 | transportin 1 | 2 | 4 | ||||||||
MIRT102618 | UBN2 | ubinuclein 2 | 2 | 4 | ||||||||
MIRT118769 | FAM217B | family with sequence similarity 217 member B | 2 | 6 | ||||||||
MIRT147282 | KPNA2 | karyopherin subunit alpha 2 | 2 | 10 | ||||||||
MIRT159513 | DYNC2LI1 | dynein cytoplasmic 2 light intermediate chain 1 | 2 | 2 | ||||||||
MIRT196438 | TAOK1 | TAO kinase 1 | 2 | 2 | ||||||||
MIRT211238 | FGF2 | fibroblast growth factor 2 | 2 | 2 | ||||||||
MIRT220422 | MKLN1 | muskelin 1 | 2 | 2 | ||||||||
MIRT223668 | FZD6 | frizzled class receptor 6 | 2 | 6 | ||||||||
MIRT223805 | OXR1 | oxidation resistance 1 | 2 | 2 | ||||||||
MIRT238585 | NLN | neurolysin | 2 | 2 | ||||||||
MIRT238652 | JMY | junction mediating and regulatory protein, p53 cofactor | 2 | 2 | ||||||||
MIRT247188 | BTG2 | BTG anti-proliferation factor 2 | 2 | 6 | ||||||||
MIRT249185 | AKIRIN1 | akirin 1 | 2 | 8 | ||||||||
MIRT252653 | LSM14A | LSM14A, mRNA processing body assembly factor | 2 | 4 | ||||||||
MIRT305624 | MBNL1 | muscleblind like splicing regulator 1 | 2 | 2 | ||||||||
MIRT315671 | NUS1 | NUS1 dehydrodolichyl diphosphate synthase subunit | 2 | 6 | ||||||||
MIRT366555 | EIF2S3 | eukaryotic translation initiation factor 2 subunit gamma | 2 | 2 | ||||||||
MIRT403294 | ZNF207 | zinc finger protein 207 | 2 | 2 | ||||||||
MIRT405966 | CHAC1 | ChaC glutathione specific gamma-glutamylcyclotransferase 1 | 2 | 2 | ||||||||
MIRT437437 | EZH2 | enhancer of zeste 2 polycomb repressive complex 2 subunit | 5 | 1 | ||||||||
MIRT438343 | MET | MET proto-oncogene, receptor tyrosine kinase | 5 | 1 | ||||||||
MIRT444395 | ZNF480 | zinc finger protein 480 | 2 | 2 | ||||||||
MIRT445255 | SEMA5A | semaphorin 5A | 2 | 2 | ||||||||
MIRT445309 | MLANA | melan-A | 2 | 2 | ||||||||
MIRT449020 | ANKRD12 | ankyrin repeat domain 12 | 2 | 2 | ||||||||
MIRT452136 | NDUFC2-KCTD14 | NDUFC2-KCTD14 readthrough | 2 | 2 | ||||||||
MIRT459438 | PPIC | peptidylprolyl isomerase C | 2 | 2 | ||||||||
MIRT460471 | MMS22L | MMS22 like, DNA repair protein | 2 | 2 | ||||||||
MIRT461294 | COX10 | COX10, heme A:farnesyltransferase cytochrome c oxidase assembly factor | 2 | 2 | ||||||||
MIRT462948 | ZNF800 | zinc finger protein 800 | 2 | 12 | ||||||||
MIRT463489 | ZC3H11A | zinc finger CCCH-type containing 11A | 2 | 12 | ||||||||
MIRT463846 | WRN | Werner syndrome RecQ like helicase | 2 | 2 | ||||||||
MIRT466183 | TMED5 | transmembrane p24 trafficking protein 5 | 2 | 4 | ||||||||
MIRT466882 | STX16 | syntaxin 16 | 2 | 2 | ||||||||
MIRT468156 | SGPL1 | sphingosine-1-phosphate lyase 1 | 2 | 2 | ||||||||
MIRT468259 | SFXN4 | sideroflexin 4 | 2 | 2 | ||||||||
MIRT469660 | RAC1 | Rac family small GTPase 1 | 2 | 10 | ||||||||
MIRT470040 | PTP4A1 | protein tyrosine phosphatase type IVA, member 1 | 2 | 2 | ||||||||
MIRT470552 | COASY | Coenzyme A synthase | 2 | 2 | ||||||||
MIRT472208 | NGFRAP1 | brain expressed X-linked 3 | 2 | 4 | ||||||||
MIRT472555 | NACC1 | nucleus accumbens associated 1 | 2 | 4 | ||||||||
MIRT473462 | MCL1 | MCL1, BCL2 family apoptosis regulator | 2 | 2 | ||||||||
MIRT473925 | LYSMD3 | LysM domain containing 3 | 2 | 4 | ||||||||
MIRT474068 | LMNB2 | lamin B2 | 2 | 2 | ||||||||
MIRT475079 | ITSN2 | intersectin 2 | 2 | 4 | ||||||||
MIRT475286 | TOR1AIP2 | torsin 1A interacting protein 2 | 2 | 2 | ||||||||
MIRT475570 | HNRNPF | heterogeneous nuclear ribonucleoprotein F | 2 | 2 | ||||||||
MIRT477516 | ELL2 | elongation factor for RNA polymerase II 2 | 2 | 2 | ||||||||
MIRT478464 | DAB2 | DAB2, clathrin adaptor protein | 2 | 2 | ||||||||
MIRT478920 | CPS1 | carbamoyl-phosphate synthase 1 | 2 | 2 | ||||||||
MIRT479338 | CERK | ceramide kinase | 2 | 2 | ||||||||
MIRT480578 | BZW1 | basic leucine zipper and W2 domains 1 | 2 | 2 | ||||||||
MIRT480915 | BCL2L11 | BCL2 like 11 | 4 | 3 | ||||||||
MIRT481532 | ARL5B | ADP ribosylation factor like GTPase 5B | 2 | 8 | ||||||||
MIRT481681 | ARAP2 | ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 | 2 | 2 | ||||||||
MIRT481724 | APPBP2 | amyloid beta precursor protein binding protein 2 | 2 | 6 | ||||||||
MIRT481938 | ANKRD11 | ankyrin repeat domain 11 | 2 | 12 | ||||||||
MIRT487099 | C2orf44 | WD repeat and coiled coil containing | 2 | 2 | ||||||||
MIRT489294 | RBM8A | RNA binding motif protein 8A | 2 | 8 | ||||||||
MIRT492255 | SLC35F5 | solute carrier family 35 member F5 | 2 | 2 | ||||||||
MIRT493268 | MAP3K4 | mitogen-activated protein kinase kinase kinase 4 | 2 | 2 | ||||||||
MIRT494770 | AP1G1 | adaptor related protein complex 1 gamma 1 subunit | 2 | 2 | ||||||||
MIRT496257 | DNAJC28 | DnaJ heat shock protein family (Hsp40) member C28 | 2 | 2 | ||||||||
MIRT497713 | ZNF645 | zinc finger protein 645 | 2 | 2 | ||||||||
MIRT498027 | ZBTB20 | zinc finger and BTB domain containing 20 | 2 | 2 | ||||||||
MIRT499292 | TSPYL1 | TSPY like 1 | 2 | 2 | ||||||||
MIRT500105 | SLC46A3 | solute carrier family 46 member 3 | 2 | 2 | ||||||||
MIRT501020 | SPATA2 | spermatogenesis associated 2 | 2 | 6 | ||||||||
MIRT501816 | NEURL1B | neuralized E3 ubiquitin protein ligase 1B | 2 | 2 | ||||||||
MIRT502296 | GNG12 | G protein subunit gamma 12 | 2 | 6 | ||||||||
MIRT502493 | FAM122B | family with sequence similarity 122B | 2 | 8 | ||||||||
MIRT503948 | MFSD6 | major facilitator superfamily domain containing 6 | 2 | 6 | ||||||||
MIRT504266 | C1orf147 | chromosome 1 open reading frame 147 | 2 | 4 | ||||||||
MIRT504370 | ARID1B | AT-rich interaction domain 1B | 2 | 6 | ||||||||
MIRT505125 | YOD1 | YOD1 deubiquitinase | 2 | 4 | ||||||||
MIRT506052 | PPP6C | protein phosphatase 6 catalytic subunit | 2 | 4 | ||||||||
MIRT506481 | MYO5A | myosin VA | 2 | 6 | ||||||||
MIRT506967 | HOXA10 | homeobox A10 | 2 | 6 | ||||||||
MIRT507728 | CLIC4 | chloride intracellular channel 4 | 2 | 4 | ||||||||
MIRT513081 | IL20RB | interleukin 20 receptor subunit beta | 2 | 6 | ||||||||
MIRT513570 | FKBP14 | FK506 binding protein 14 | 2 | 2 | ||||||||
MIRT513631 | UBE2A | ubiquitin conjugating enzyme E2 A | 2 | 4 | ||||||||
MIRT513692 | RNF111 | ring finger protein 111 | 2 | 2 | ||||||||
MIRT513764 | PEX5L | peroxisomal biogenesis factor 5 like | 2 | 4 | ||||||||
MIRT520786 | TBX18 | T-box 18 | 2 | 4 | ||||||||
MIRT523402 | GRIK3 | glutamate ionotropic receptor kainate type subunit 3 | 2 | 4 | ||||||||
MIRT525719 | DCAF12L2 | DDB1 and CUL4 associated factor 12 like 2 | 2 | 2 | ||||||||
MIRT527750 | NANOGNB | NANOG neighbor homeobox | 2 | 2 | ||||||||
MIRT532823 | ZNF827 | zinc finger protein 827 | 2 | 2 | ||||||||
MIRT534603 | RORA | RAR related orphan receptor A | 2 | 2 | ||||||||
MIRT535762 | MYCN | MYCN proto-oncogene, bHLH transcription factor | 2 | 2 | ||||||||
MIRT536346 | LEFTY1 | left-right determination factor 1 | 2 | 2 | ||||||||
MIRT543081 | APP | amyloid beta precursor protein | 2 | 2 | ||||||||
MIRT544064 | KIAA1462 | junctional cadherin 5 associated | 2 | 2 | ||||||||
MIRT545424 | SLC39A6 | solute carrier family 39 member 6 | 2 | 2 | ||||||||
MIRT546238 | TNRC18P2 | trinucleotide repeat containing 18 pseudogene 2 | 2 | 4 | ||||||||
MIRT546324 | TGFBR3 | transforming growth factor beta receptor 3 | 2 | 2 | ||||||||
MIRT547361 | NAA30 | N(alpha)-acetyltransferase 30, NatC catalytic subunit | 2 | 2 | ||||||||
MIRT547539 | MAML3 | mastermind like transcriptional coactivator 3 | 2 | 2 | ||||||||
MIRT548062 | GOLGA7 | golgin A7 | 2 | 2 | ||||||||
MIRT549248 | ATXN1L | ataxin 1 like | 2 | 4 | ||||||||
MIRT549250 | ATXN1 | ataxin 1 | 2 | 2 | ||||||||
MIRT549467 | ACSL4 | acyl-CoA synthetase long chain family member 4 | 2 | 2 | ||||||||
MIRT549937 | RPL7L1 | ribosomal protein L7 like 1 | 2 | 4 | ||||||||
MIRT551489 | TMEM192 | transmembrane protein 192 | 2 | 4 | ||||||||
MIRT552564 | ZFP36L2 | ZFP36 ring finger protein like 2 | 2 | 4 | ||||||||
MIRT553688 | TFAP4 | transcription factor AP-4 | 2 | 4 | ||||||||
MIRT553951 | STAMBP | STAM binding protein | 2 | 2 | ||||||||
MIRT554163 | SLC7A2 | solute carrier family 7 member 2 | 2 | 4 | ||||||||
MIRT554477 | SAMD12 | sterile alpha motif domain containing 12 | 2 | 2 | ||||||||
MIRT554918 | RAP2C | RAP2C, member of RAS oncogene family | 2 | 2 | ||||||||
MIRT555003 | RAB39B | RAB39B, member RAS oncogene family | 2 | 2 | ||||||||
MIRT555109 | PURB | purine rich element binding protein B | 2 | 2 | ||||||||
MIRT555445 | NT5C3A | 5'-nucleotidase, cytosolic IIIA | 2 | 2 | ||||||||
MIRT555535 | PLEKHA3 | pleckstrin homology domain containing A3 | 2 | 2 | ||||||||
MIRT556092 | MORC3 | MORC family CW-type zinc finger 3 | 2 | 2 | ||||||||
MIRT556571 | LIFR | LIF receptor alpha | 2 | 2 | ||||||||
MIRT556936 | INO80D | INO80 complex subunit D | 2 | 4 | ||||||||
MIRT558176 | EIF5A2 | eukaryotic translation initiation factor 5A2 | 2 | 2 | ||||||||
MIRT558368 | DIDO1 | death inducer-obliterator 1 | 2 | 4 | ||||||||
MIRT558464 | DCUN1D1 | defective in cullin neddylation 1 domain containing 1 | 2 | 2 | ||||||||
MIRT559236 | BICD2 | BICD cargo adaptor 2 | 2 | 4 | ||||||||
MIRT560099 | ERCC8 | ERCC excision repair 8, CSA ubiquitin ligase complex subunit | 2 | 2 | ||||||||
MIRT560725 | ZNF749 | zinc finger protein 749 | 2 | 2 | ||||||||
MIRT561142 | SPAG1 | sperm associated antigen 1 | 2 | 2 | ||||||||
MIRT561721 | PPP2R2A | protein phosphatase 2 regulatory subunit Balpha | 2 | 2 | ||||||||
MIRT562484 | CHORDC1 | cysteine and histidine rich domain containing 1 | 2 | 2 | ||||||||
MIRT562681 | AGO4 | argonaute 4, RISC catalytic component | 2 | 2 | ||||||||
MIRT564997 | WNK1 | WNK lysine deficient protein kinase 1 | 2 | 2 | ||||||||
MIRT565068 | USP25 | ubiquitin specific peptidase 25 | 2 | 2 | ||||||||
MIRT565184 | TTC37 | tetratricopeptide repeat domain 37 | 2 | 2 | ||||||||
MIRT565946 | RREB1 | ras responsive element binding protein 1 | 2 | 2 | ||||||||
MIRT566315 | POU2F1 | POU class 2 homeobox 1 | 2 | 2 | ||||||||
MIRT566435 | PHF3 | PHD finger protein 3 | 2 | 2 | ||||||||
MIRT566485 | PCCB | propionyl-CoA carboxylase beta subunit | 2 | 2 | ||||||||
MIRT566612 | NR3C1 | nuclear receptor subfamily 3 group C member 1 | 4 | 2 | ||||||||
MIRT566761 | MOB4 | MOB family member 4, phocein | 2 | 2 | ||||||||
MIRT566867 | LRRC1 | leucine rich repeat containing 1 | 2 | 2 | ||||||||
MIRT567232 | HSPE1-MOB4 | HSPE1-MOB4 readthrough | 2 | 2 | ||||||||
MIRT567245 | HSPA13 | heat shock protein family A (Hsp70) member 13 | 2 | 2 | ||||||||
MIRT567292 | HNRNPAB | heterogeneous nuclear ribonucleoprotein A/B | 2 | 2 | ||||||||
MIRT568426 | ATF7IP | activating transcription factor 7 interacting protein | 2 | 2 | ||||||||
MIRT570705 | FAM69A | family with sequence similarity 69 member A | 2 | 2 | ||||||||
MIRT570931 | ZNF284 | zinc finger protein 284 | 2 | 2 | ||||||||
MIRT571631 | SMARCA5 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 | 2 | 2 | ||||||||
MIRT571647 | SIX4 | SIX homeobox 4 | 2 | 2 | ||||||||
MIRT574274 | ZNF350 | zinc finger protein 350 | 2 | 2 | ||||||||
MIRT574304 | CMTM6 | CKLF like MARVEL transmembrane domain containing 6 | 2 | 2 | ||||||||
MIRT574614 | LZIC | leucine zipper and CTNNBIP1 domain containing | 2 | 2 | ||||||||
MIRT574843 | CADM1 | cell adhesion molecule 1 | 2 | 2 | ||||||||
MIRT608128 | TSC22D2 | TSC22 domain family member 2 | 2 | 2 | ||||||||
MIRT648849 | WNT7A | Wnt family member 7A | 2 | 2 | ||||||||
MIRT687559 | MLEC | malectin | 2 | 2 | ||||||||
MIRT696548 | HIST1H3B | histone cluster 1 H3 family member b | 2 | 2 | ||||||||
MIRT697517 | ZBTB7A | zinc finger and BTB domain containing 7A | 2 | 2 | ||||||||
MIRT701146 | PANK1 | pantothenate kinase 1 | 2 | 2 | ||||||||
MIRT704284 | DENND5B | DENN domain containing 5B | 2 | 2 | ||||||||
MIRT704541 | CNEP1R1 | CTD nuclear envelope phosphatase 1 regulatory subunit 1 | 2 | 2 | ||||||||
MIRT707687 | GPR50 | G protein-coupled receptor 50 | 2 | 2 | ||||||||
MIRT707810 | TSPAN6 | tetraspanin 6 | 2 | 2 | ||||||||
MIRT710019 | KCNQ5 | potassium voltage-gated channel subfamily Q member 5 | 2 | 2 | ||||||||
MIRT712705 | TEX9 | testis expressed 9 | 2 | 2 | ||||||||
MIRT731264 | ETS1 | ETS proto-oncogene 1, transcription factor | 1 | 1 | ||||||||
MIRT731606 | SMAD4 | SMAD family member 4 | 1 | 1 | ||||||||
MIRT731688 | MAP3K8 | mitogen-activated protein kinase kinase kinase 8 | 3 | 1 | ||||||||
MIRT731796 | ZEB1 | zinc finger E-box binding homeobox 1 | 3 | 1 | ||||||||
MIRT731798 | ZEB2 | zinc finger E-box binding homeobox 2 | 3 | 1 | ||||||||
MIRT732183 | PTGS2 | prostaglandin-endoperoxide synthase 2 | 3 | 1 | ||||||||
MIRT732711 | ADAM10 | ADAM metallopeptidase domain 10 | 4 | 0 | ||||||||
MIRT732936 | HGF | hepatocyte growth factor | 1 | 0 | ||||||||
MIRT733214 | TLR2 | toll like receptor 2 | 2 | 0 | ||||||||
MIRT734500 | ADAMTS5 | ADAM metallopeptidase with thrombospondin type 1 motif 5 | 3 | 0 | ||||||||
MIRT734637 | RPE | ribulose-5-phosphate-3-epimerase | 2 | 0 | ||||||||
MIRT735650 | PIK3R1 | phosphoinositide-3-kinase regulatory subunit 1 | 1 | 0 | ||||||||
MIRT736975 | BCL6 | B-cell CLL/lymphoma 6 | 3 | 0 | ||||||||
MIRT737058 | FBXW7 | F-box and WD repeat domain containing 7 | 3 | 0 | ||||||||
MIRT737435 | CLK3 | CDC like kinase 3 | 2 | 0 | ||||||||
MIRT755765 | FOXO1 | forkhead box O1 | 3 | 1 | ||||||||
MIRT755949 | ONECUT2 | one cut homeobox 2 | 7 | 1 |
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