miRTarBase - #MIRT072025


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pre-miRNA Information
pre-miRNA hsa-mir-511   
Genomic Coordinates chr10: 17845107 - 17845193
Description Homo sapiens miR-511 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-511-3p
Sequence 54| AAUGUGUAGCAAAAGACAGA |73
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30502461 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs548691953 3 dbSNP
rs1322530388 4 dbSNP
rs1313209508 11 dbSNP
rs1223031412 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SCP2   
Synonyms NLTP, NSL-TP, SCP-2, SCP-CHI, SCP-X, SCPX
Description sterol carrier protein 2
Transcript NM_001007250   
Other Transcripts NM_001007099 , NM_001007100 , NM_001007098 , NM_002979   
Expression
Putative miRNA Targets on SCP2
3'UTR of SCP2
(miRNA target sites are highlighted)		 
>SCP2|NM_001007250|3'UTR
   1 TGACTGGTAAAATGAATCCTCAGTCGGCCTTCTTTCAAGGCAAATTGAAAATCACTGGCAACATGGGTCTCGCTATGAAG
  81 TTACAAAATCTTCAGCTTCAGCCAGGCAACGCTAAGCTCTGAAGAACTCCCTTTGGCTACTTTTGAAAATCAAGATGAGA
 161 TATATAGATATATATCCATACATTTTATTGTCAGAATTTAGACTGAAACTACACATTGGCAAATAGCGTGGGATAGATTT
 241 GTTTCTTAATGGGTGTGACCAATCCTGTTTTTCCTATGCTCTGGGTGAATAGAGCCTGATGGTATACTACTGCTTTGCGG
 321 AATTGCATACAACTGTGCATTACAAAGTTAATATGGTAATTATGGTCTGGGGTAAAATTGAGTTTCAGAATAAAATTAGG
 401 AACAGTAAAATCCAAAGAACTATGTAAACAAAAAAGCTTTTGTTTTGCTTACAAAGTATATTTAAGGATTATTCTGCTGA
 481 AGATTCAGTTTAAGAGTTTTCCTTGGGAGAACTAAGTAAGAAACACAATGCCAACAGCTGGCCAGTAATTAGTGTTGTGC
 561 ACTTCATGTCATTAATCAATTTCTCAATAGTTCTTAAAATTAGTGAGATTAAAAATCTAAAAATTTTGCATTTCATGCTA
 641 TCAGAAACAGTATTTTCTTCCCAAATCAAAATAAAAGAAATATGATCAGAGCTTGAACACAGGCTTATTTTTAAAATAAA
 721 AATATTTTTAACATGGGTTTCCTTATTGAAAAATCAGTGTATTAGTCATAAAACACCATCATTAAGAATAATTGAACAAT
 801 AAAGTTTGCTTTCAGATGCAGTTTTCAAATTATAATCTCATTTCAATTTATAACGTTCTCAGTCCTTTGTTATAATTTTC
 881 CTTTTTCATGTAAGTTTAATTATCTGCATTTATCTTTTTTCCTAGTTTTTCTAATACTAATGTTATTTCTTAAAATTCAG
 961 TGAGATATAGGATAAAATAATGCTTTGAGAAGAATGTTTAATAGAAAATTAAAATAACTTTTTCTGGCCTCTCTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agACAG----AAA----AC---GAUGUGUAa 5'
            ||||    |||    ||   |||||||| 
Target 5' atTGTCAGAATTTAGACTGAAACTACACATt 3'
 187 - 217 150.00 -14.10
2 
miRNA  3' agACAGAAAACG-AUGUGUaa 5'
            | | |||||| |||| |  
Target 5' ctTTTGTTTTGCTTACAAAgt 3'
 437 - 457 114.00 -7.16
3 
miRNA  3' agaCAGAAAACGAUGUGUAa 5'
             ||| ||||:||:| || 
Target 5' tcaGTCCTTTGTTATA-ATt 3'
 859 - 877 105.00 -9.44
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1204521 213 ClinVar
500511 2782 ClinVar
559031 2801 ClinVar
1207687 2850 ClinVar
COSM4008851 4 COSMIC
COSM7169409 15 COSMIC
COSM8935096 15 COSMIC
COSM8371653 36 COSMIC
COSN30188113 54 COSMIC
COSN31494538 67 COSMIC
COSN30105018 166 COSMIC
COSN21101805 243 COSMIC
COSN6038664 401 COSMIC
COSN32008206 432 COSMIC
COSN24970797 691 COSMIC
COSN21367146 840 COSMIC
COSN29916723 1033 COSMIC
COSN22858908 1582 COSMIC
COSN22420989 1768 COSMIC
COSN8473777 1995 COSMIC
COSN31601848 2587 COSMIC
COSN30495654 2625 COSMIC
COSN31594398 2636 COSMIC
COSN30152263 2651 COSMIC
COSN26993951 2665 COSMIC
COSN30111335 2665 COSMIC
COSN26572366 2667 COSMIC
COSM7573130 2698 COSMIC
COSM5928181 2700 COSMIC
COSM7597795 2704 COSMIC
COSM6899463 2712 COSMIC
COSM6773371 2725 COSMIC
COSM9085800 2730 COSMIC
COSM464758 2736 COSMIC
COSM1343428 2740 COSMIC
COSM8456882 2743 COSMIC
COSM7890703 2744 COSMIC
COSM6773369 2771 COSMIC
COSM9045755 2773 COSMIC
COSM4724258 2782 COSMIC
COSN22474706 2807 COSMIC
COSN26993953 2809 COSMIC
COSN31559035 2812 COSMIC
COSN20073748 2852 COSMIC
COSN30518276 2862 COSMIC
COSN31500693 2866 COSMIC
COSN30524527 2873 COSMIC
COSN21682925 2884 COSMIC
COSN30519803 2899 COSMIC
COSN30501509 2905 COSMIC
COSN32063222 3617 COSMIC
COSN16073095 3648 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1306871678 2 dbSNP
rs764502038 6 dbSNP
rs1348146600 10 dbSNP
rs1224940180 19 dbSNP
rs1462485350 21 dbSNP
rs370629918 24 dbSNP
rs143184935 26 dbSNP
rs1007014203 27 dbSNP
rs1395284711 28 dbSNP
rs1009644575 33 dbSNP
rs1254712562 40 dbSNP
rs1282761463 41 dbSNP
rs1481908405 44 dbSNP
rs374337749 57 dbSNP
rs754499993 60 dbSNP
rs778748459 73 dbSNP
rs747813973 80 dbSNP
rs371192674 82 dbSNP
rs1432329475 83 dbSNP
rs770874876 85 dbSNP
rs559341790 86 dbSNP
rs759649893 87 dbSNP
rs765274721 91 dbSNP
rs1308897256 96 dbSNP
rs1368124739 97 dbSNP
rs1406272240 98 dbSNP
rs1485458716 100 dbSNP
rs1303327352 101 dbSNP
rs775628107 104 dbSNP
rs1378378294 113 dbSNP
rs1311042677 115 dbSNP
rs1001218931 119 dbSNP
rs1436005830 124 dbSNP
rs376128848 127 dbSNP
rs1332928826 134 dbSNP
rs1451187280 135 dbSNP
rs766758742 141 dbSNP
rs1362352931 143 dbSNP
rs1184469013 145 dbSNP
rs866465077 147 dbSNP
rs1434371832 148 dbSNP
rs146748004 149 dbSNP
rs1257411851 153 dbSNP
rs140436060 162 dbSNP
rs1351294989 170 dbSNP
rs1281203829 174 dbSNP
rs4599997 186 dbSNP
rs1348818289 194 dbSNP
rs1262220920 197 dbSNP
rs927132477 203 dbSNP
rs1266014775 205 dbSNP
rs11206080 213 dbSNP
rs1213956571 226 dbSNP
rs992624796 228 dbSNP
rs113711901 231 dbSNP
rs940412084 233 dbSNP
rs768145896 235 dbSNP
rs180995960 236 dbSNP
rs4348672 255 dbSNP
rs930815946 273 dbSNP
rs1470804773 274 dbSNP
rs1417679514 277 dbSNP
rs1163387075 279 dbSNP
rs562509918 286 dbSNP
rs1184879762 288 dbSNP
rs1048625080 291 dbSNP
rs1445400794 297 dbSNP
rs889987216 301 dbSNP
rs1007480608 302 dbSNP
rs36079443 310 dbSNP
rs183646006 318 dbSNP
rs1486157481 330 dbSNP
rs1456998958 333 dbSNP
rs771110243 338 dbSNP
rs78569697 340 dbSNP
rs573193180 341 dbSNP
rs771314245 344 dbSNP
rs1020324430 350 dbSNP
rs1234987564 351 dbSNP
rs1335421460 357 dbSNP
rs968686969 360 dbSNP
rs978711001 361 dbSNP
rs1336358924 366 dbSNP
rs1411621105 381 dbSNP
rs777031330 384 dbSNP
rs2896792 400 dbSNP
rs1385930592 401 dbSNP
rs958615374 405 dbSNP
rs34715832 408 dbSNP
rs1324309403 414 dbSNP
rs1042460383 421 dbSNP
rs993073189 427 dbSNP
rs1419183654 429 dbSNP
rs1266906751 430 dbSNP
rs917064472 435 dbSNP
rs558642899 436 dbSNP
rs1000680563 438 dbSNP
rs1194094023 440 dbSNP
rs971822486 448 dbSNP
rs1468205023 454 dbSNP
rs150345953 461 dbSNP
rs1273100242 479 dbSNP
rs1033560135 482 dbSNP
rs11206081 484 dbSNP
rs189222378 497 dbSNP
rs1472491491 499 dbSNP
rs1340846826 509 dbSNP
rs1188663807 514 dbSNP
rs1394186122 522 dbSNP
rs181925033 524 dbSNP
rs1370506530 527 dbSNP
rs961055662 529 dbSNP
rs972923954 540 dbSNP
rs1397335925 544 dbSNP
rs890040663 546 dbSNP
rs1431686201 555 dbSNP
rs575024706 558 dbSNP
rs1408723002 567 dbSNP
rs1306155184 571 dbSNP
rs1369866753 575 dbSNP
rs568178974 580 dbSNP
rs942945257 584 dbSNP
rs1168597266 588 dbSNP
rs868645850 600 dbSNP
rs1415226301 605 dbSNP
rs762960278 609 dbSNP
rs540933444 610 dbSNP
rs910714464 632 dbSNP
rs1010758233 639 dbSNP
rs1179500190 643 dbSNP
rs943638724 644 dbSNP
rs1020376913 645 dbSNP
rs1209559864 648 dbSNP
rs1345167971 655 dbSNP
rs923292662 672 dbSNP
rs559043058 674 dbSNP
rs1343738380 679 dbSNP
rs764223774 682 dbSNP
rs1368676032 684 dbSNP
rs1279338407 685 dbSNP
rs138056669 686 dbSNP
rs1338069798 688 dbSNP
rs551428512 690 dbSNP
rs1330208903 694 dbSNP
rs1434154131 698 dbSNP
rs564950347 707 dbSNP
rs1435587051 709 dbSNP
rs903897168 709 dbSNP
rs958890017 710 dbSNP
rs371864177 716 dbSNP
rs1201458621 719 dbSNP
rs550492074 720 dbSNP
rs961902628 724 dbSNP
rs1187215116 726 dbSNP
rs1449078741 743 dbSNP
rs757596670 749 dbSNP
rs1259021108 753 dbSNP
rs6664654 768 dbSNP
rs148954508 770 dbSNP
rs546895470 773 dbSNP
rs1222398696 775 dbSNP
rs1390982157 777 dbSNP
rs1353344090 780 dbSNP
rs896828379 783 dbSNP
rs951762086 784 dbSNP
rs1451475424 787 dbSNP
rs1314845714 792 dbSNP
rs74550275 803 dbSNP
rs1344856459 806 dbSNP
rs1402228521 813 dbSNP
rs1408512682 821 dbSNP
rs1027155919 823 dbSNP
rs1474187417 828 dbSNP
rs952464743 832 dbSNP
rs1006640231 836 dbSNP
rs755929457 843 dbSNP
rs1239971148 852 dbSNP
rs1389574965 853 dbSNP
rs1466495447 860 dbSNP
rs779856453 864 dbSNP
rs942975827 868 dbSNP
rs1017807621 869 dbSNP
rs1399826678 875 dbSNP
rs1395217117 880 dbSNP
rs143687750 886 dbSNP
rs558558633 889 dbSNP
rs922799039 891 dbSNP
rs923523300 892 dbSNP
rs186687970 894 dbSNP
rs1295153223 896 dbSNP
rs978084586 904 dbSNP
rs1287317676 914 dbSNP
rs6664845 915 dbSNP
rs1389018569 918 dbSNP
rs904609924 920 dbSNP
rs1459762380 922 dbSNP
rs1396563247 923 dbSNP
rs3766762 934 dbSNP
rs1427407812 935 dbSNP
rs1055116536 937 dbSNP
rs1187851370 943 dbSNP
rs1234630971 947 dbSNP
rs1258258317 948 dbSNP
rs190354085 949 dbSNP
rs1213484463 953 dbSNP
rs949193940 954 dbSNP
rs771771951 959 dbSNP
rs764812823 960 dbSNP
rs1024219364 964 dbSNP
rs1306930665 971 dbSNP
rs1293529810 972 dbSNP
rs1216507618 987 dbSNP
rs1366222432 996 dbSNP
rs1303007213 1015 dbSNP
rs1438397943 1033 dbSNP
rs1396497163 1034 dbSNP
rs6677541 1046 dbSNP
rs993293865 1070 dbSNP
rs554427932 1086 dbSNP
rs1186841536 1089 dbSNP
rs1027423957 1104 dbSNP
rs115083667 1105 dbSNP
rs1178206817 1106 dbSNP
rs1375830372 1110 dbSNP
rs985833121 1111 dbSNP
rs1018006070 1123 dbSNP
rs1159649564 1124 dbSNP
rs371845606 1134 dbSNP
rs964893078 1136 dbSNP
rs1255298929 1137 dbSNP
rs1192214321 1142 dbSNP
rs3766763 1146 dbSNP
rs965735546 1152 dbSNP
rs117413344 1159 dbSNP
rs1206685386 1162 dbSNP
rs922884749 1168 dbSNP
rs967020803 1173 dbSNP
rs1232445225 1180 dbSNP
rs1372839959 1181 dbSNP
rs770138004 1186 dbSNP
rs925331194 1193 dbSNP
rs1371152611 1200 dbSNP
rs1299867163 1203 dbSNP
rs1409871782 1209 dbSNP
rs1374393913 1211 dbSNP
rs1171295471 1221 dbSNP
rs75099829 1222 dbSNP
rs1436202251 1225 dbSNP
rs879635629 1231 dbSNP
rs530579004 1235 dbSNP
rs1418907414 1237 dbSNP
rs1304134302 1243 dbSNP
rs926081614 1248 dbSNP
rs1310939890 1251 dbSNP
rs936098551 1252 dbSNP
rs1483414175 1260 dbSNP
rs1055886476 1265 dbSNP
rs138405059 1275 dbSNP
rs1208921350 1284 dbSNP
rs1197507971 1288 dbSNP
rs1256319610 1291 dbSNP
rs1238037406 1294 dbSNP
rs1314954410 1297 dbSNP
rs114724211 1301 dbSNP
rs1046106329 1308 dbSNP
rs897762682 1322 dbSNP
rs949226160 1323 dbSNP
rs1046197976 1331 dbSNP
rs1402437676 1332 dbSNP
rs993347770 1351 dbSNP
rs1331622852 1367 dbSNP
rs1453488827 1368 dbSNP
rs181277170 1378 dbSNP
rs76652687 1386 dbSNP
rs775887746 1387 dbSNP
rs1488872132 1388 dbSNP
rs186737313 1395 dbSNP
rs1192989337 1397 dbSNP
rs1048774568 1400 dbSNP
rs375861691 1405 dbSNP
rs1265253074 1407 dbSNP
rs1432528225 1413 dbSNP
rs1257087544 1433 dbSNP
rs1007301508 1435 dbSNP
rs1182763238 1440 dbSNP
rs1017343875 1442 dbSNP
rs766202280 1443 dbSNP
rs1413930995 1448 dbSNP
rs966150137 1449 dbSNP
rs975774349 1454 dbSNP
rs1262273946 1455 dbSNP
rs1228888867 1456 dbSNP
rs1469369744 1461 dbSNP
rs888123662 1462 dbSNP
rs1158013731 1465 dbSNP
rs1350101376 1467 dbSNP
rs1340620238 1471 dbSNP
rs1459042808 1472 dbSNP
rs1021015380 1475 dbSNP
rs532321723 1476 dbSNP
rs751477458 1477 dbSNP
rs977656181 1484 dbSNP
rs900888703 1488 dbSNP
rs1366212679 1491 dbSNP
rs764667332 1495 dbSNP
rs774624423 1496 dbSNP
rs1394362345 1502 dbSNP
rs936147273 1510 dbSNP
rs1404918636 1511 dbSNP
rs1473815789 1513 dbSNP
rs574570294 1515 dbSNP
rs1369188283 1516 dbSNP
rs4926946 1519 dbSNP
rs114207153 1523 dbSNP
rs777789219 1526 dbSNP
rs1209094181 1547 dbSNP
rs902661605 1550 dbSNP
rs950155659 1560 dbSNP
rs537908328 1561 dbSNP
rs1032528574 1564 dbSNP
rs958050426 1565 dbSNP
rs990743249 1581 dbSNP
rs1327854185 1582 dbSNP
rs1297943787 1585 dbSNP
rs1436243799 1596 dbSNP
rs1370815016 1604 dbSNP
rs1324458817 1606 dbSNP
rs897819180 1620 dbSNP
rs929250969 1622 dbSNP
rs970821845 1624 dbSNP
rs767914498 1638 dbSNP
rs555070505 1663 dbSNP
rs1205841091 1670 dbSNP
rs75236145 1671 dbSNP
rs1189528339 1678 dbSNP
rs984072104 1692 dbSNP
rs1250921333 1697 dbSNP
rs191228641 1698 dbSNP
rs1039421985 1710 dbSNP
rs1007352465 1719 dbSNP
rs1181168807 1722 dbSNP
rs3766764 1723 dbSNP
rs901610080 1724 dbSNP
rs577601042 1730 dbSNP
rs546527755 1747 dbSNP
rs370111138 1750 dbSNP
rs1347540375 1751 dbSNP
rs1425194924 1755 dbSNP
rs1162216523 1756 dbSNP
rs182109320 1763 dbSNP
rs1383740041 1765 dbSNP
rs757440212 1773 dbSNP
rs1041846393 1780 dbSNP
rs1429804617 1782 dbSNP
rs1309214754 1783 dbSNP
rs41294744 1785 dbSNP
rs1434343087 1787 dbSNP
rs147252734 1804 dbSNP
rs200968485 1809 dbSNP
rs1380299591 1817 dbSNP
rs1478262697 1820 dbSNP
rs866748144 1825 dbSNP
rs1232203564 1828 dbSNP
rs1230262155 1846 dbSNP
rs1179664053 1851 dbSNP
rs1483744572 1855 dbSNP
rs1251927956 1861 dbSNP
rs1310818451 1863 dbSNP
rs1209627784 1872 dbSNP
rs1345319453 1883 dbSNP
rs1221260664 1891 dbSNP
rs894029154 1891 dbSNP
rs1346229597 1892 dbSNP
rs1279475389 1893 dbSNP
rs1358864586 1906 dbSNP
rs1352341164 1910 dbSNP
rs1308745485 1911 dbSNP
rs1414347431 1926 dbSNP
rs1373848017 1931 dbSNP
rs377083630 1933 dbSNP
rs1023634092 1941 dbSNP
rs77069307 1942 dbSNP
rs982229118 1944 dbSNP
rs1411991898 1949 dbSNP
rs1186573038 1957 dbSNP
rs540420427 1961 dbSNP
rs1484425450 1969 dbSNP
rs1482038827 1971 dbSNP
rs951247623 1973 dbSNP
rs1443295990 1974 dbSNP
rs983919907 1974 dbSNP
rs559957630 1983 dbSNP
rs909708503 1983 dbSNP
rs957571235 2009 dbSNP
rs868769892 2011 dbSNP
rs975308960 2013 dbSNP
rs7534827 2014 dbSNP
rs1286168557 2016 dbSNP
rs1449052620 2017 dbSNP
rs538323461 2033 dbSNP
rs1316002042 2040 dbSNP
rs552057906 2043 dbSNP
rs933623857 2052 dbSNP
rs1389244559 2053 dbSNP
rs1164204051 2056 dbSNP
rs568886556 2057 dbSNP
rs1449618446 2072 dbSNP
rs1182013587 2079 dbSNP
rs1474895265 2088 dbSNP
rs916037708 2090 dbSNP
rs1241840588 2112 dbSNP
rs1169924533 2116 dbSNP
rs185391264 2121 dbSNP
rs902893057 2122 dbSNP
rs1319946878 2123 dbSNP
rs1428416802 2126 dbSNP
rs548317458 2131 dbSNP
rs79433217 2134 dbSNP
rs929298382 2137 dbSNP
rs1049015779 2138 dbSNP
rs1361499283 2140 dbSNP
rs747724570 2143 dbSNP
rs190890302 2148 dbSNP
rs1436996636 2153 dbSNP
rs757837683 2155 dbSNP
rs1325072067 2156 dbSNP
rs183512660 2159 dbSNP
rs777305435 2161 dbSNP
rs34492961 2162 dbSNP
rs1045259533 2174 dbSNP
rs1382289533 2179 dbSNP
rs1408914628 2187 dbSNP
rs554364832 2195 dbSNP
rs564594351 2196 dbSNP
rs776154038 2203 dbSNP
rs906550364 2209 dbSNP
rs1436010893 2216 dbSNP
rs1003913115 2221 dbSNP
rs746164956 2222 dbSNP
rs1299919763 2223 dbSNP
rs1190184293 2233 dbSNP
rs571058828 2234 dbSNP
rs1249053670 2238 dbSNP
rs1213943439 2240 dbSNP
rs1487811423 2256 dbSNP
rs1279219138 2260 dbSNP
rs1313781874 2261 dbSNP
rs540108196 2266 dbSNP
rs531801820 2269 dbSNP
rs1272733117 2271 dbSNP
rs556912145 2274 dbSNP
rs1236597653 2290 dbSNP
rs1230898352 2291 dbSNP
rs1025733751 2292 dbSNP
rs1302451010 2295 dbSNP
rs1190031673 2319 dbSNP
rs951579555 2319 dbSNP
rs770090348 2323 dbSNP
rs780511094 2332 dbSNP
rs545042975 2334 dbSNP
rs1016800420 2339 dbSNP
rs1170034873 2345 dbSNP
rs1245690207 2346 dbSNP
rs1430010751 2347 dbSNP
rs1391131314 2369 dbSNP
rs1173433874 2371 dbSNP
rs1431838960 2373 dbSNP
rs1427859412 2375 dbSNP
rs1448326347 2376 dbSNP
rs963858998 2377 dbSNP
rs997298439 2381 dbSNP
rs1167883175 2385 dbSNP
rs975341403 2389 dbSNP
rs1426477048 2394 dbSNP
rs1279940659 2398 dbSNP
rs1042527736 2403 dbSNP
rs1230754085 2404 dbSNP
rs1313808919 2406 dbSNP
rs12095520 2412 dbSNP
rs1223160887 2415 dbSNP
rs17107756 2435 dbSNP
rs1309358239 2437 dbSNP
rs572668465 2452 dbSNP
rs1322755552 2455 dbSNP
rs1363181811 2461 dbSNP
rs1430070285 2463 dbSNP
rs957623555 2464 dbSNP
rs1464845728 2466 dbSNP
rs924294678 2482 dbSNP
rs554316200 2484 dbSNP
rs1472568756 2486 dbSNP
rs1023158908 2489 dbSNP
rs1409788244 2497 dbSNP
rs574467183 2509 dbSNP
rs971971950 2513 dbSNP
rs981586114 2516 dbSNP
rs1472981959 2527 dbSNP
rs772217163 2543 dbSNP
rs1199009539 2545 dbSNP
rs1484078819 2546 dbSNP
rs1256372276 2550 dbSNP
rs539962012 2560 dbSNP
rs1327031728 2577 dbSNP
rs1290194620 2593 dbSNP
rs1217349747 2594 dbSNP
rs773328976 2600 dbSNP
rs1354334106 2601 dbSNP
rs919348157 2604 dbSNP
rs1397418674 2613 dbSNP
rs747482614 2613 dbSNP
rs948197192 2616 dbSNP
rs559870044 2623 dbSNP
rs1457088087 2636 dbSNP
rs1386496350 2657 dbSNP
rs1162082193 2658 dbSNP
rs747469417 2658 dbSNP
rs780575094 2658 dbSNP
rs1299639856 2666 dbSNP
rs1309684795 2668 dbSNP
rs763235925 2669 dbSNP
rs1274595233 2670 dbSNP
rs368158994 2673 dbSNP
rs751971067 2675 dbSNP
rs1425816510 2679 dbSNP
rs113818155 2681 dbSNP
rs371285649 2686 dbSNP
rs768172039 2688 dbSNP
rs1003789547 2690 dbSNP
rs750930902 2691 dbSNP
rs1428936776 2692 dbSNP
rs754585943 2695 dbSNP
rs1463411858 2699 dbSNP
rs1187804732 2700 dbSNP
rs1388269101 2708 dbSNP
rs778473698 2715 dbSNP
rs1209289358 2716 dbSNP
rs747545436 2728 dbSNP
rs11552386 2733 dbSNP
rs758082412 2734 dbSNP
rs1456052095 2735 dbSNP
rs1333428972 2739 dbSNP
rs777240423 2743 dbSNP
rs746849767 2744 dbSNP
rs1436308796 2768 dbSNP
rs1340678953 2769 dbSNP
rs376079960 2774 dbSNP
rs760910778 2777 dbSNP
rs745787905 2779 dbSNP
rs143534838 2782 dbSNP
rs1198012722 2783 dbSNP
rs887096881 2784 dbSNP
rs1458234448 2790 dbSNP
rs775648079 2791 dbSNP
rs1390058741 2793 dbSNP
rs1219604761 2797 dbSNP
rs10888761 2801 dbSNP
rs371544586 2802 dbSNP
rs1465139572 2803 dbSNP
rs1207888908 2804 dbSNP
rs1246044521 2805 dbSNP
rs376238218 2806 dbSNP
rs1182433868 2810 dbSNP
rs923167891 2820 dbSNP
rs767971892 2826 dbSNP
rs933158016 2827 dbSNP
rs751029426 2829 dbSNP
rs373008388 2834 dbSNP
rs761268397 2835 dbSNP
rs766736765 2836 dbSNP
rs1249663535 2846 dbSNP
rs74363442 2850 dbSNP
rs114881358 2864 dbSNP
rs753714288 2880 dbSNP
rs542965362 2887 dbSNP
rs531551240 2891 dbSNP
rs1351623718 2899 dbSNP
rs112421025 2900 dbSNP
rs866144269 2906 dbSNP
rs1225743389 2918 dbSNP
rs376568756 2920 dbSNP
rs989873873 2922 dbSNP
rs1282535552 2925 dbSNP
rs915619886 2929 dbSNP
rs1350925318 2932 dbSNP
rs1331013311 2934 dbSNP
rs139330698 2935 dbSNP
rs1013209891 2936 dbSNP
rs1322195169 2942 dbSNP
rs1023632957 2946 dbSNP
rs759324875 2948 dbSNP
rs1229996145 2961 dbSNP
rs1391557772 2965 dbSNP
rs1307575507 2976 dbSNP
rs765166150 2977 dbSNP
rs1391730283 2978 dbSNP
rs1168965618 2981 dbSNP
rs1477596762 2991 dbSNP
rs971637429 2998 dbSNP
rs188281484 3004 dbSNP
rs1200983584 3005 dbSNP
rs948229797 3007 dbSNP
rs373719822 3014 dbSNP
rs1209991711 3015 dbSNP
rs547932003 3016 dbSNP
rs1483845833 3036 dbSNP
rs1449322077 3039 dbSNP
rs1367116662 3040 dbSNP
rs1274972584 3045 dbSNP
rs939639305 3050 dbSNP
rs1220971100 3060 dbSNP
rs1047302295 3069 dbSNP
rs141596187 3076 dbSNP
rs1236071829 3089 dbSNP
rs941303118 3092 dbSNP
rs909240090 3096 dbSNP
rs1184770055 3101 dbSNP
rs1308936830 3102 dbSNP
rs1410145722 3107 dbSNP
rs757925702 3130 dbSNP
rs150876601 3132 dbSNP
rs41294746 3146 dbSNP
rs1393031645 3155 dbSNP
rs74658110 3156 dbSNP
rs13496 3160 dbSNP
rs756985924 3164 dbSNP
rs554511373 3172 dbSNP
rs1252089146 3174 dbSNP
rs1029931927 3179 dbSNP
rs182947399 3180 dbSNP
rs1202649572 3184 dbSNP
rs533616749 3187 dbSNP
rs1288313098 3193 dbSNP
rs1305955720 3200 dbSNP
rs1334904213 3202 dbSNP
rs1352470256 3204 dbSNP
rs1053532825 3208 dbSNP
rs894847373 3215 dbSNP
rs553468721 3232 dbSNP
rs576567342 3233 dbSNP
rs947721403 3234 dbSNP
rs1046023201 3242 dbSNP
rs567448578 3245 dbSNP
rs1244600412 3249 dbSNP
rs1387782387 3249 dbSNP
rs1291766930 3255 dbSNP
rs1412088344 3274 dbSNP
rs1483676653 3279 dbSNP
rs1207836289 3282 dbSNP
rs749735100 3284 dbSNP
rs1026467517 3296 dbSNP
rs989747684 3312 dbSNP
rs1462096907 3313 dbSNP
rs1437561094 3324 dbSNP
rs1188555264 3334 dbSNP
rs3766765 3349 dbSNP
rs1006300616 3355 dbSNP
rs1016752474 3358 dbSNP
rs576244725 3363 dbSNP
rs964786758 3366 dbSNP
rs1442916588 3370 dbSNP
rs969805534 3384 dbSNP
rs1163021499 3395 dbSNP
rs1390787966 3396 dbSNP
rs1227909524 3403 dbSNP
rs1377223221 3405 dbSNP
rs1286219722 3408 dbSNP
rs8871 3417 dbSNP
rs928157175 3418 dbSNP
rs1364272186 3426 dbSNP
rs1318396641 3431 dbSNP
rs1030304255 3436 dbSNP
rs1437223647 3441 dbSNP
rs1049891 3447 dbSNP
rs1166581319 3460 dbSNP
rs1388657659 3462 dbSNP
rs939501253 3470 dbSNP
rs1804424 3479 dbSNP
rs1395565004 3483 dbSNP
rs748616960 3486 dbSNP
rs1396365147 3503 dbSNP
rs533064684 3526 dbSNP
rs1335859176 3527 dbSNP
rs35262614 3538 dbSNP
rs1338325540 3545 dbSNP
rs977986226 3552 dbSNP
rs923811535 3557 dbSNP
rs1297703825 3562 dbSNP
rs1343628814 3563 dbSNP
rs1187182575 3586 dbSNP
rs936484091 3588 dbSNP
rs1231289063 3593 dbSNP
rs908769603 3594 dbSNP
rs1220893068 3595 dbSNP
rs1339211450 3596 dbSNP
rs1201374865 3597 dbSNP
rs1320069125 3602 dbSNP
rs1292279853 3605 dbSNP
rs1258632354 3608 dbSNP
rs989282100 3609 dbSNP
rs1341118743 3611 dbSNP
rs941354090 3615 dbSNP
rs1038406967 3624 dbSNP
rs1183175403 3626 dbSNP
rs899814397 3639 dbSNP
rs879913142 3640 dbSNP
rs1351130262 3641 dbSNP
rs1303309650 3654 dbSNP
rs1428740315 3658 dbSNP
rs947804080 3659 dbSNP
rs1389887826 3664 dbSNP
rs1167077592 3668 dbSNP
rs1046499205 3670 dbSNP
rs1190989016 3672 dbSNP
rs1372427617 3676 dbSNP
rs1466414073 3682 dbSNP
rs906184798 3689 dbSNP
rs1051178945 3699 dbSNP
rs1403546771 3700 dbSNP
rs3820200 3701 dbSNP
rs761512462 3705 dbSNP
rs1307915219 3714 dbSNP
rs547845968 3721 dbSNP
rs146509985 3723 dbSNP
rs200633566 3723 dbSNP
rs59822370 3723 dbSNP
rs1369048705 3729 dbSNP
rs886643132 3737 dbSNP
rs188096239 3752 dbSNP
rs1309542814 3760 dbSNP
rs998678608 3761 dbSNP
rs191776340 3766 dbSNP
rs60576668 3767 dbSNP
rs1234520805 3768 dbSNP
rs1431983960 3769 dbSNP
rs1427922602 3773 dbSNP
rs1200190474 3781 dbSNP
rs1011431228 3782 dbSNP
rs1249870054 3783 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agacagaaaacGAUGUGUAa 5'
                     |||||||| 
Target 5' --------aaaCUACACAUu 3'
 		1 - 12
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000371514.3 | 3UTR | AAACUACACAUUGGCAAAUAGCGUGGGAUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
239 hsa-miR-511-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT068303 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT072025 SCP2 sterol carrier protein 2 2 2
MIRT073626 IGF1R insulin like growth factor 1 receptor 2 2
MIRT080574 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT094167 PCGF3 polycomb group ring finger 3 2 4
MIRT096536 LIFR LIF receptor alpha 2 2
MIRT156224 SLC25A12 solute carrier family 25 member 12 2 2
MIRT177714 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT184922 ZNF268 zinc finger protein 268 2 2
MIRT185107 LYPLAL1 lysophospholipase like 1 2 2
MIRT193093 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT213346 TADA2B transcriptional adaptor 2B 2 2
MIRT225350 SDCBP syndecan binding protein 2 2
MIRT226972 AKAP2 A-kinase anchoring protein 2 2 6
MIRT226977 PALM2-AKAP2 PALM2-AKAP2 readthrough 2 6
MIRT229844 YIPF6 Yip1 domain family member 6 2 2
MIRT230994 PRRG4 proline rich and Gla domain 4 2 2
MIRT270215 ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 2 4
MIRT277060 NDFIP2 Nedd4 family interacting protein 2 2 4
MIRT278336 CFL2 cofilin 2 2 4
MIRT280390 CALM1 calmodulin 1 2 2
MIRT298042 BACH1 BTB domain and CNC homolog 1 2 2
MIRT302449 CLIP4 CAP-Gly domain containing linker protein family member 4 2 2
MIRT311937 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 4
MIRT329263 AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 2 2
MIRT359186 F2RL1 F2R like trypsin receptor 1 2 6
MIRT363208 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT371124 YTHDC1 YTH domain containing 1 2 2
MIRT386755 TAOK1 TAO kinase 1 2 2
MIRT395122 BAHD1 bromo adjacent homology domain containing 1 2 2
MIRT396089 MKLN1 muskelin 1 2 2
MIRT443566 EVX2 even-skipped homeobox 2 2 2
MIRT447626 CUL3 cullin 3 2 2
MIRT447680 ZNF264 zinc finger protein 264 2 2
MIRT451053 NT5C1B 5'-nucleotidase, cytosolic IB 2 2
MIRT452048 NT5C1B-RDH14 NT5C1B-RDH14 readthrough 2 2
MIRT459890 KIAA1191 KIAA1191 2 4
MIRT464483 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465264 TRIM44 tripartite motif containing 44 2 2
MIRT467570 SLITRK4 SLIT and NTRK like family member 4 2 2
MIRT467800 SLC2A14 solute carrier family 2 member 14 2 2
MIRT469543 RASAL2 RAS protein activator like 2 2 2
MIRT469931 PTPRJ protein tyrosine phosphatase, receptor type J 2 4
MIRT474056 LMNB2 lamin B2 2 2
MIRT474097 LMBR1L limb development membrane protein 1 like 2 2
MIRT475183 INSIG2 insulin induced gene 2 2 6
MIRT484264 FAM177A1 family with sequence similarity 177 member A1 2 2
MIRT487567 LOXL2 lysyl oxidase like 2 2 2
MIRT499080 CBWD1 COBW domain containing 1 2 6
MIRT499126 CBWD5 COBW domain containing 5 2 6
MIRT502093 KPNA5 karyopherin subunit alpha 5 2 8
MIRT503328 SOX5 SRY-box 5 2 6
MIRT503839 NCAM2 neural cell adhesion molecule 2 2 6
MIRT504030 CEP104 centrosomal protein 104 2 4
MIRT504314 LHFPL5 LHFPL tetraspan subfamily member 5 2 8
MIRT504525 BVES blood vessel epicardial substance 2 6
MIRT504680 CYGB cytoglobin 2 4
MIRT504815 DOCK7 dedicator of cytokinesis 7 2 4
MIRT505757 SENP1 SUMO1/sentrin specific peptidase 1 2 8
MIRT506151 PLEKHA3 pleckstrin homology domain containing A3 2 6
MIRT506908 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 6
MIRT508259 CD226 CD226 molecule 2 2
MIRT508307 XRCC3 X-ray repair cross complementing 3 2 4
MIRT508784 CDKL1 cyclin dependent kinase like 1 2 6
MIRT508897 C4orf29 abhydrolase domain containing 18 2 6
MIRT508967 TECRL trans-2,3-enoyl-CoA reductase like 2 4
MIRT508973 MLLT3 MLLT3, super elongation complex subunit 2 6
MIRT509149 TSC22D3 TSC22 domain family member 3 2 4
MIRT509188 TSPAN2 tetraspanin 2 2 4
MIRT509212 BRCC3 BRCA1/BRCA2-containing complex subunit 3 2 4
MIRT509214 SEC23IP SEC23 interacting protein 2 6
MIRT509237 PDE10A phosphodiesterase 10A 2 6
MIRT509248 OTX1 orthodenticle homeobox 1 2 6
MIRT509469 TRIM2 tripartite motif containing 2 2 4
MIRT509754 EFCAB11 EF-hand calcium binding domain 11 2 4
MIRT509805 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT509938 USP25 ubiquitin specific peptidase 25 2 4
MIRT509954 ITGA1 integrin subunit alpha 1 2 6
MIRT509965 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 4
MIRT509988 GTF2H1 general transcription factor IIH subunit 1 2 4
MIRT510036 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 2 6
MIRT510164 STARD8 StAR related lipid transfer domain containing 8 2 4
MIRT510199 CYP4F11 cytochrome P450 family 4 subfamily F member 11 2 9
MIRT510249 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 6
MIRT510502 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 2 2
MIRT510906 PURA purine rich element binding protein A 2 4
MIRT511051 NRF1 nuclear respiratory factor 1 2 4
MIRT511273 KLHL23 kelch like family member 23 2 4
MIRT511368 IL6ST interleukin 6 signal transducer 2 4
MIRT511521 HMGB2 high mobility group box 2 2 4
MIRT512004 DUSP7 dual specificity phosphatase 7 2 4
MIRT512080 CSRNP3 cysteine and serine rich nuclear protein 3 2 8
MIRT514234 EPOR erythropoietin receptor 2 4
MIRT515327 SLC35E3 solute carrier family 35 member E3 2 4
MIRT515409 WDR72 WD repeat domain 72 2 8
MIRT515973 C9orf156 tRNA methyltransferase O 2 4
MIRT516015 NLGN3 neuroligin 3 2 4
MIRT516271 DBT dihydrolipoamide branched chain transacylase E2 2 10
MIRT516495 GLRX2 glutaredoxin 2 2 4
MIRT517272 ANG angiogenin 2 4
MIRT517511 KCNK12 potassium two pore domain channel subfamily K member 12 2 4
MIRT517555 VENTX VENT homeobox 2 4
MIRT519511 RBM22 RNA binding motif protein 22 2 4
MIRT520350 UBN2 ubinuclein 2 2 2
MIRT520687 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT520960 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT521759 PPIL1 peptidylprolyl isomerase like 1 2 6
MIRT522036 PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 2 4
MIRT522127 NELL2 neural EGFL like 2 2 4
MIRT522624 MAP7D1 MAP7 domain containing 1 2 4
MIRT522761 LDLR low density lipoprotein receptor 2 6
MIRT522924 KAT6A lysine acetyltransferase 6A 2 6
MIRT523391 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 4
MIRT523851 ETV6 ETS variant 6 2 2
MIRT523890 EPHA5 EPH receptor A5 2 4
MIRT523945 E2F8 E2F transcription factor 8 2 4
MIRT524222 DCUN1D3 defective in cullin neddylation 1 domain containing 3 2 2
MIRT524410 CNTNAP5 contactin associated protein like 5 2 4
MIRT524568 CALML4 calmodulin like 4 2 4
MIRT524611 ENTHD1 ENTH domain containing 1 2 2
MIRT524907 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 2 4
MIRT525019 ABHD13 abhydrolase domain containing 13 2 6
MIRT525211 C19orf12 chromosome 19 open reading frame 12 2 2
MIRT528253 BMS1 BMS1, ribosome biogenesis factor 2 2
MIRT528294 ZNF76 zinc finger protein 76 2 2
MIRT531898 INVS inversin 2 4
MIRT535962 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT540823 SSPN sarcospan 2 4
MIRT541836 CDON cell adhesion associated, oncogene regulated 2 4
MIRT541914 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT542156 KIAA2018 upstream transcription factor family member 3 2 6
MIRT542175 SERTM1 serine rich and transmembrane domain containing 1 2 6
MIRT542217 IRS1 insulin receptor substrate 1 2 4
MIRT542225 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 6
MIRT543654 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT544097 EDA2R ectodysplasin A2 receptor 2 2
MIRT544533 SPPL3 signal peptide peptidase like 3 2 2
MIRT544954 TUB tubby bipartite transcription factor 2 4
MIRT545027 PLP1 proteolipid protein 1 2 2
MIRT546524 SERTAD3 SERTA domain containing 3 2 2
MIRT547242 OSBPL9 oxysterol binding protein like 9 2 4
MIRT548198 FNIP1 folliculin interacting protein 1 2 2
MIRT548272 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT549480 ACBD5 acyl-CoA binding domain containing 5 2 2
MIRT549498 ABI2 abl interactor 2 2 2
MIRT550325 SMAD9 SMAD family member 9 2 2
MIRT550563 CYP4V2 cytochrome P450 family 4 subfamily V member 2 2 6
MIRT550642 AR androgen receptor 2 2
MIRT550945 CTSE cathepsin E 2 4
MIRT550961 POT1 protection of telomeres 1 2 2
MIRT551178 ATP7A ATPase copper transporting alpha 2 2
MIRT551416 LRRC31 leucine rich repeat containing 31 2 2
MIRT551507 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 2 2
MIRT551517 MMADHC methylmalonic aciduria and homocystinuria, cblD type 2 2
MIRT551550 TMEM133 transmembrane protein 133 2 2
MIRT551757 TRIM42 tripartite motif containing 42 2 2
MIRT551872 TMEM47 transmembrane protein 47 2 2
MIRT551882 EPHA1 EPH receptor A1 2 2
MIRT551917 IGLON5 IgLON family member 5 2 2
MIRT552377 ZNF562 zinc finger protein 562 2 2
MIRT552543 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT553419 TRAF5 TNF receptor associated factor 5 2 2
MIRT554080 SNX4 sorting nexin 4 2 4
MIRT554588 RRAGC Ras related GTP binding C 2 2
MIRT554887 RCC2 regulator of chromosome condensation 2 2 2
MIRT555568 PLCB1 phospholipase C beta 1 2 2
MIRT555819 PCDH11Y protocadherin 11 Y-linked 2 4
MIRT555969 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT556028 MXD1 MAX dimerization protein 1 2 2
MIRT556206 MBNL2 muscleblind like splicing regulator 2 2 2
MIRT556251 MARCH3 membrane associated ring-CH-type finger 3 2 2
MIRT557265 HMGN3 high mobility group nucleosomal binding domain 3 2 2
MIRT557334 HHIP hedgehog interacting protein 2 2
MIRT557427 GXYLT2 glucoside xylosyltransferase 2 2 4
MIRT557537 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT557797 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT557805 FOXP1 forkhead box P1 2 2
MIRT558569 CRIM1 cysteine rich transmembrane BMP regulator 1 2 2
MIRT558734 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT558878 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT558933 CBX1 chromobox 1 2 2
MIRT559133 BTG3 BTG anti-proliferation factor 3 2 4
MIRT559168 BRWD3 bromodomain and WD repeat domain containing 3 2 4
MIRT559618 AMER1 APC membrane recruitment protein 1 2 2
MIRT561627 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT561971 LRRC59 leucine rich repeat containing 59 2 2
MIRT563049 ZNF138 zinc finger protein 138 2 2
MIRT563432 TRIM13 tripartite motif containing 13 2 4
MIRT563540 RBM41 RNA binding motif protein 41 2 2
MIRT564647 ZNF544 zinc finger protein 544 2 2
MIRT567674 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT567755 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT568267 BICD2 BICD cargo adaptor 2 2 2
MIRT569160 SIGMAR1 sigma non-opioid intracellular receptor 1 2 2
MIRT569179 DMD dystrophin 2 2
MIRT569427 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT569853 RGS5 regulator of G protein signaling 5 2 2
MIRT570554 PLAG1 PLAG1 zinc finger 2 2
MIRT571233 SYT9 synaptotagmin 9 2 2
MIRT572276 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT572539 ZFHX2 zinc finger homeobox 2 2 2
MIRT574271 ZNF350 zinc finger protein 350 2 2
MIRT574428 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT574671 HNRNPDL heterogeneous nuclear ribonucleoprotein D like 2 2
MIRT576699 Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 2
MIRT607889 SATB1 SATB homeobox 1 2 2
MIRT608846 FGF14 fibroblast growth factor 14 2 6
MIRT608854 SPATA6 spermatogenesis associated 6 2 2
MIRT608879 CNTF ciliary neurotrophic factor 2 6
MIRT608899 ZNF860 zinc finger protein 860 2 2
MIRT608948 C12orf60 chromosome 12 open reading frame 60 2 2
MIRT609029 CDH6 cadherin 6 2 2
MIRT609063 LPP LIM domain containing preferred translocation partner in lipoma 2 4
MIRT612277 ZNF280B zinc finger protein 280B 2 2
MIRT612520 SEPT7 septin 7 2 2
MIRT617202 GREM1 gremlin 1, DAN family BMP antagonist 2 2
MIRT618700 KIF13A kinesin family member 13A 2 2
MIRT619141 AFF2 AF4/FMR2 family member 2 2 2
MIRT621071 RAB11FIP3 RAB11 family interacting protein 3 2 6
MIRT627811 PTCHD1 patched domain containing 1 2 4
MIRT641782 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT657645 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT669313 C16orf72 chromosome 16 open reading frame 72 2 2
MIRT674602 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 2
MIRT684064 CPPED1 calcineurin like phosphoesterase domain containing 1 2 2
MIRT685149 TACR3 tachykinin receptor 3 2 2
MIRT693446 PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma 2 2
MIRT693808 WDR3 WD repeat domain 3 2 2
MIRT703845 ETV3 ETS variant 3 2 2
MIRT707100 ZNF850 zinc finger protein 850 2 2
MIRT707375 SVIP small VCP interacting protein 2 2
MIRT707467 ROCK2 Rho associated coiled-coil containing protein kinase 2 2 2
MIRT707514 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT707542 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 2 2
MIRT707560 CLVS2 clavesin 2 2 2
MIRT708113 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT708217 ADD2 adducin 2 2 2
MIRT710678 MX2 MX dynamin like GTPase 2 2 2
MIRT755898 ZFPM2-AS1 ZFPM2 antisense RNA 1 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-511-3p Doxorubicin 31703 NSC123127 approved resistant High Anaplastic Thyroid Cancer tissue
hsa-miR-511-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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