miRTarBase - #MIRT075032


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pre-miRNA Information
pre-miRNA hsa-mir-548f-1   
Genomic Coordinates chr10: 54607874 - 54607957
Synonyms MIR548F-1, MIRN548F1, hsa-mir-548f-1, MIR548F1
Description Homo sapiens miR-548f-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-548f-2   
Genomic Coordinates chr2: 212426263 - 212426360
Synonyms MIR548F-2, MIRN548F2, hsa-mir-548f-2, MIR548F2
Description Homo sapiens miR-548f-2 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-548f-3   
Genomic Coordinates chr5: 110513829 - 110513915
Synonyms MIR548F-3, MIRN548F3, hsa-mir-548f-3, MIR548F3
Description Homo sapiens miR-548f-3 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-548f-4   
Genomic Coordinates chr7: 147378017 - 147378121
Synonyms MIR548F-4, MIRN548F4, hsa-mir-548f-4, MIR548F4
Description Homo sapiens miR-548f-4 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-548f-5   
Genomic Coordinates chrX: 32641474 - 32641559
Synonyms MIR548F-5, MIRN548F5, hsa-mir-548f-5, MIR548F5
Description Homo sapiens miR-548f-5 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548f-3p
Sequence 59| AAAAACUGUAAUUACUUUU |77
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 10 - 54607905 29233923 MiREDiBase
A-to-I 4 10 - 54607904 29233923 MiREDiBase
A-to-I 5 10 - 54607903 29233923 MiREDiBase
A-to-I 10 10 - 54607898 29233923 MiREDiBase
A-to-I 3 2 - 212426300 29233923 MiREDiBase
A-to-I 4 2 - 212426299 29233923 MiREDiBase
A-to-I 5 2 - 212426298 29233923 MiREDiBase
A-to-I 3 5 - 110513860 29233923 MiREDiBase
A-to-I 4 5 - 110513859 29233923 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN26988089 5 COSMIC
COSN30456990 6 COSMIC
COSN15625252 6 COSMIC
COSN31522782 7 COSMIC
COSN31545996 8 COSMIC
COSN31570212 9 COSMIC
COSN1084275 12 COSMIC
COSN15625251 15 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs966876049 1 dbSNP
rs1321394893 2 dbSNP
rs923504759 3 dbSNP
rs1168522027 5 dbSNP
rs1187070531 5 dbSNP
rs1485986292 6 dbSNP
rs776299100 6 dbSNP
rs1421488925 6 dbSNP
rs748224431 6 dbSNP
rs1262049804 7 dbSNP
rs1258250226 7 dbSNP
rs568151991 8 dbSNP
rs1233367754 8 dbSNP
rs778777095 9 dbSNP
rs760758823 9 dbSNP
rs1330282349 10 dbSNP
rs749737324 10 dbSNP
rs760103713 10 dbSNP
rs754285569 10 dbSNP
rs756628155 10 dbSNP
rs1380895949 10 dbSNP
rs768673400 12 dbSNP
rs1478761955 13 dbSNP
rs1437534303 15 dbSNP
rs749009182 15 dbSNP
rs773271422 15 dbSNP
rs747569615 15 dbSNP
rs779944053 16 dbSNP
rs771761319 16 dbSNP
rs1159501553 18 dbSNP
rs757404662 19 dbSNP
rs1191871489 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DYNC1LI2   
Synonyms DNCLI2, LIC2
Description dynein cytoplasmic 1 light intermediate chain 2
Transcript NM_006141   
Expression
Putative miRNA Targets on DYNC1LI2
3'UTR of DYNC1LI2
(miRNA target sites are highlighted)		 
>DYNC1LI2|NM_006141|3'UTR
   1 ACCTCCTTAAAAAGTGCATATGTCGAATGACCAAATAACTATGTATATTGATCTGCTAAGACCAGGATTTTTCTGATATG
  81 GCACATGCTATCAGTTTTTTGGGGCAGGGGAGATGAACTTTAAAAAAAAAAAAAAAACTTCATTGGCTTGTCCGAGTGTG
 161 AAATGCACATTTAGGAAGGTTACATGTCAGACCCTTTGTTAAGGATAACCCTTGGACTCTGGGGCATGTGGCTCTTTTGT
 241 GGGAGGCAAGCACATCTGGGCTTCTTGTGGAGGGGAAGGTAGAGTGAAAGAAAGAGGGCCCACTTTCTAACAGGGTGGAG
 321 CAAATGAGACCAAGAAATCATTGGTAAGATGATGGTTAGTCTGACCAGTTTCATGTTAGTAAATTCACTTGTTCTTGGGA
 401 AGCAGATTAAGTAGCAGAAAGTCCAGGAAAGAAAGACCAGAAGGAGTAATGAGACAAGTGATGGTGGGGAAGCTGAATGT
 481 TGAGGGAGGTGGAGGAAGGAGGAGATGAGCAGTGTCAGTAAATACTGTGCATTCAGTAGAAGTTGAAGAATCATTGTTAG
 561 AAGCATTTCCAAACAAAACACTAAGCAAAATGGGAATTAGGCTTATTTTGAATGCATCTTTAACTTACGAAAGATGTACT
 641 AATTGTGGGGGTGCCTGAGTCAGGCGGAGCTGACCCAGGGGTGGGAACGATGGCAGCTGCCCAGGACCCATGTGCTTGGC
 721 CCAGGCTATGTCCTCGTGAGAGGTACTGGGGTCCACGGATATGTGTTGTGGGGCAGACAGTCACTGTGGGATGTCTTCAA
 801 AGTCAGCAGTTACAGAATTAGTTTACTTTGAATTTTGTTGTCTAAATAGCTCCTGCTTTATTTTTTAAATTAAATTTTTT
 881 GTTTTTACTATCACAGGCTGGCCTAACTAATACAAAATAGGTGATGAACCTCTGGTTTTACCATAATGCAATGTGCCACG
 961 GAAAGTTTGGGGGAGGTTTTTAATGTAATTGCACTCTGGTTAATTGGCTCGTACCAAGCCCTGCCTTATGACTTGTGGAA
1041 AGCTTCAAGGAGTTCCACTGATGCAAAAGGGTCTTTTCCTAGCTTCCTGGTCTGATCAGTGCTATGAGATGGACAGATAA
1121 GTGTGAATGTTTTATACAGAAAATGGAAATGATACATTTCTCTTGTTAGGTGTTTTCATAAAATGTAGCATTTTTTTTCT
1201 TATGGAAATAAGAGTTTCAGGTGTCTCCCCACCTAGGGCAAATTCATGCACATTGTCATGTTATACCACCATTCTGGAAA
1281 TGATTTCTGTGGATTTGAAATTGCACTTTTAATTTTATATATGACAGCATTTAAATGCAAACACTACCATGAATTTAATG
1361 TATAAAATGTTGTCAAACCAAGGGAAAAAACCACAGTTCACCATGTGGAGTTTACTTTTTTTATATGAATGTTTGTTGTA
1441 CTGTGTCTAAGCATAACTTCCCTAATGTCATTACTTTTACATACCAGATTTGACTGACCACTAATGTAGTACTGGGGATA
1521 ACTTAATATCCTATGTTGTGTCAAGACTCTTTGAAGACTTTCTTGAATTGCTTTCGTAAAGGTCTGAACACTGTTAAGGA
1601 GAAAGCTGAGTATCAACTTGCCTTTCTGATAGAAATGTTTCTTGTGCCAGTTTTATTGTTGAGATATACTATTTTTTTCC
1681 TTTTTTAATTCAGTTTTTTAAAAAAACAAATGTATTGTGGCTTCCAGTTACCAGGTTGTCTAGGTAATGACAGTAAACTG
1761 ACTGTAGAATGATAATTGTGGTATAGTGACCAATAGATGCCAAACAGCTTGTGGCCTCACTAAAGGTGGGGTCGCTTAGT
1841 CCCCGGGAGTAAAATGAGTGACCTCAGAAACAAGAATTCCTGGAAAGGCACATGCCGAAGAGGAATATGGTATAATTTTA
1921 AATTTTAATGCAAAATTTTAATTTGTCTTTATTTTTTATCATTTGAACTGATAAGCACTTTTTGTGTCAATATAAAATAT
2001 ACTAAAACTGATGAAATGCTAAGACATGTCTTGTGAAGGAAGGTTTCTTGGAGACCACTTTTATTTACTCATGAGAAGTG
2081 GAAGCTCCTAGTATCAGAAGAAGCTGATACATAGTGTCATGTGCTCAGTGGTTGCCAAAGTCTACCAACTTTGGGGAGCT
2161 GCAGGGTTCTTTTTGGGAGGTGGGAGGAAGGGAGATGAGTTTTGTTATTTTGGGGTTTTCAAGCATTGGAACCAAAGGCC
2241 AAATAATAAACAGCCTTTAGTTTTTAAAGTAAAATTCATTTTATTTGCAGAGTACACTTGTATGGTAGACTGTTAAAGAC
2321 AATTTTATGACTATTTATGCACATTATAATGGTTACATCTGCTTTTTGTCTTTAAAATAAAAAAAAAAATCAGAGAAAAG
2401 CCCACCTTTGAATACGTGGCTGAAGATAACAGCCAAGAATTGGTCTTTCCTAAAAATGCAACAGATAATGCTGCTAGATT
2481 GTTATTTTGTTTGCACTTTTTTTTGATTGGCATTTTAAAATCGGTATTTAAACTGAAGACATTGTCATGTTTTATTAATT
2561 TAACAAAGTTGAAAGTGACTGCTCTGTACATCATGACCTTAACAATGTTAATGCTGTAAGTGAAAGTTCACTGTCGTCTG
2641 TATACTAAATTTATTGGTGTTTCTAACTTAAAAGTAAGACTGCAGATTATCCCCCACCAGCCTTAGTCCAGGGGTGTGGC
2721 TCTGTCCGGGTGCAGTATGCAGTCATGTGGAACCTTGCTTTCTAGTCCTGGGAAAAAAAGATGTCTCTAATTACTGGCTT
2801 CAATAAACACGAATCCAGACTGCTTAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuuucAUUAAUGUCAAAAa 5'
               ||||| ||||||| 
Target 5' tttttTAATT-CAGTTTTt 3'
 1681 - 1698 157.00 -7.00
2 
miRNA  3' uuuucAUUAAUGUCAAAAa 5'
               |: |  ||||||| 
Target 5' gcacaTGCTATCAGTTTTt 3'
 81 - 99 142.00 -5.80
3 
miRNA  3' uuuUCAUUAAU------GUCAAAaa 5'
             || |:|||      :|||||  
Target 5' gtcAGCAGTTACAGAATTAGTTTac 3'
 802 - 826 114.00 -6.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30471638 5 COSMIC
COSN30490503 6 COSMIC
COSN31597709 13 COSMIC
COSN30119618 24 COSMIC
COSN31538599 108 COSMIC
COSN20078506 119 COSMIC
COSN20112971 121 COSMIC
COSN26537818 121 COSMIC
COSN27587389 122 COSMIC
COSN31779106 184 COSMIC
COSN31779105 185 COSMIC
COSN15667546 244 COSMIC
COSN8407532 273 COSMIC
COSM6274601 311 COSMIC
COSN31959684 506 COSMIC
COSN1189459 523 COSMIC
COSN5865425 693 COSMIC
COSN20093140 921 COSMIC
COSN31595958 956 COSMIC
COSN31490977 1162 COSMIC
COSN31487314 1189 COSMIC
COSN29899797 1190 COSMIC
COSN29582867 1191 COSMIC
COSN30540374 1438 COSMIC
COSN6092187 1440 COSMIC
COSN26507667 1452 COSMIC
COSN30172495 1556 COSMIC
COSN30539514 1575 COSMIC
COSN31541300 1680 COSMIC
COSN21579477 1771 COSMIC
COSN31562170 1922 COSMIC
COSN31546078 2003 COSMIC
COSN26584350 2126 COSMIC
COSN31517212 2369 COSMIC
COSN31568624 2380 COSMIC
COSN31536376 2444 COSMIC
COSN30165456 2787 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs145329067 9 dbSNP
rs757265330 14 dbSNP
rs752142596 15 dbSNP
rs1260181305 16 dbSNP
rs369722699 18 dbSNP
rs763496624 21 dbSNP
rs753063973 24 dbSNP
rs549165492 25 dbSNP
rs1384244272 26 dbSNP
rs1315397458 27 dbSNP
rs11556991 28 dbSNP
rs1380983436 32 dbSNP
rs759268503 39 dbSNP
rs761403638 40 dbSNP
rs1419934572 41 dbSNP
rs1362059069 46 dbSNP
rs776365836 48 dbSNP
rs1443760244 49 dbSNP
rs1369029736 50 dbSNP
rs1470851706 57 dbSNP
rs751898120 63 dbSNP
rs1204354693 65 dbSNP
rs1452704089 67 dbSNP
rs1386339172 74 dbSNP
rs1294383258 75 dbSNP
rs1050944188 79 dbSNP
rs886901414 79 dbSNP
rs1404013218 80 dbSNP
rs1283342863 81 dbSNP
rs1220808191 82 dbSNP
rs1226074675 89 dbSNP
rs1260023931 95 dbSNP
rs1192325538 102 dbSNP
rs1351330387 105 dbSNP
rs1358962071 107 dbSNP
rs1287552474 112 dbSNP
rs1490245018 115 dbSNP
rs1287075917 116 dbSNP
rs1200484373 120 dbSNP
rs1225706579 121 dbSNP
rs1181187337 122 dbSNP
rs1471630627 122 dbSNP
rs998543818 128 dbSNP
rs529401278 131 dbSNP
rs899733962 132 dbSNP
rs1161824770 133 dbSNP
rs560450548 133 dbSNP
rs1441320409 135 dbSNP
rs1001151314 136 dbSNP
rs968409696 137 dbSNP
rs1257619550 138 dbSNP
rs80335537 138 dbSNP
rs878987984 138 dbSNP
rs1028373456 139 dbSNP
rs1346143417 142 dbSNP
rs1336262387 145 dbSNP
rs963763463 150 dbSNP
rs145908814 153 dbSNP
rs1312600843 154 dbSNP
rs1422567317 157 dbSNP
rs1052479926 165 dbSNP
rs1364757668 168 dbSNP
rs77040735 177 dbSNP
rs1402086409 178 dbSNP
rs1195292429 183 dbSNP
rs1040795596 187 dbSNP
rs13332513 190 dbSNP
rs561485873 193 dbSNP
rs541709189 194 dbSNP
rs566718013 206 dbSNP
rs1048298537 209 dbSNP
rs1445574958 211 dbSNP
rs544604336 212 dbSNP
rs752846875 215 dbSNP
rs1165866702 224 dbSNP
rs1366987729 234 dbSNP
rs1460201788 239 dbSNP
rs1189579688 246 dbSNP
rs1426619138 248 dbSNP
rs1297099159 264 dbSNP
rs931185454 267 dbSNP
rs575903721 268 dbSNP
rs1217423315 270 dbSNP
rs556134457 271 dbSNP
rs1289830156 274 dbSNP
rs1222263984 275 dbSNP
rs542325025 278 dbSNP
rs926567269 282 dbSNP
rs1267553437 293 dbSNP
rs1225895155 294 dbSNP
rs1326285571 296 dbSNP
rs1294936104 303 dbSNP
rs970069109 305 dbSNP
rs765292230 306 dbSNP
rs573704513 310 dbSNP
rs917973316 316 dbSNP
rs1342044144 317 dbSNP
rs1300872992 320 dbSNP
rs988253177 321 dbSNP
rs935478197 329 dbSNP
rs748102462 332 dbSNP
rs368246915 333 dbSNP
rs115271220 339 dbSNP
rs1243000649 340 dbSNP
rs953730265 346 dbSNP
rs1029266041 353 dbSNP
rs1478824185 358 dbSNP
rs1266809507 359 dbSNP
rs1198993819 365 dbSNP
rs201252626 368 dbSNP
rs1452343224 369 dbSNP
rs185733215 371 dbSNP
rs571561370 374 dbSNP
rs965104618 379 dbSNP
rs1194433503 383 dbSNP
rs1029938337 385 dbSNP
rs776061346 385 dbSNP
rs1433860126 388 dbSNP
rs998011072 391 dbSNP
rs1324152334 404 dbSNP
rs1373309625 411 dbSNP
rs1463016771 414 dbSNP
rs1173656171 420 dbSNP
rs1019317500 425 dbSNP
rs1405250809 426 dbSNP
rs1003960026 438 dbSNP
rs899768488 439 dbSNP
rs753557019 442 dbSNP
rs886864013 443 dbSNP
rs1039607083 446 dbSNP
rs1381462396 450 dbSNP
rs1403056453 455 dbSNP
rs1309488598 457 dbSNP
rs1026740377 458 dbSNP
rs1262649282 460 dbSNP
rs1324880600 467 dbSNP
rs1206163454 475 dbSNP
rs1289243497 482 dbSNP
rs1485716191 484 dbSNP
rs558037340 491 dbSNP
rs557815931 501 dbSNP
rs1429996200 505 dbSNP
rs375180487 506 dbSNP
rs1470235908 512 dbSNP
rs1251741925 516 dbSNP
rs1469914434 521 dbSNP
rs1452698744 525 dbSNP
rs777182006 526 dbSNP
rs180675837 530 dbSNP
rs140699046 540 dbSNP
rs1346282025 541 dbSNP
rs935444456 542 dbSNP
rs529344996 543 dbSNP
rs896522626 545 dbSNP
rs866697793 548 dbSNP
rs1052517931 550 dbSNP
rs1316861462 556 dbSNP
rs1262939558 564 dbSNP
rs935362376 578 dbSNP
rs925373453 594 dbSNP
rs1267762144 598 dbSNP
rs979985910 608 dbSNP
rs932192902 616 dbSNP
rs1480456082 623 dbSNP
rs1192434884 626 dbSNP
rs1405628134 627 dbSNP
rs546069573 628 dbSNP
rs948219484 636 dbSNP
rs976397727 643 dbSNP
rs916836594 650 dbSNP
rs1188720948 652 dbSNP
rs1366458463 661 dbSNP
rs973583721 665 dbSNP
rs1277919878 674 dbSNP
rs1484996872 675 dbSNP
rs965415999 677 dbSNP
rs909584901 678 dbSNP
rs1222257335 679 dbSNP
rs1204569187 682 dbSNP
rs146426107 687 dbSNP
rs1261344752 688 dbSNP
rs546784016 689 dbSNP
rs1223109849 690 dbSNP
rs951228797 697 dbSNP
rs1480249786 701 dbSNP
rs1177755591 702 dbSNP
rs1322807280 716 dbSNP
rs1442499578 723 dbSNP
rs951105324 724 dbSNP
rs1216153850 726 dbSNP
rs1026707860 728 dbSNP
rs1426869397 729 dbSNP
rs533397006 733 dbSNP
rs760993001 735 dbSNP
rs771847007 736 dbSNP
rs963833704 740 dbSNP
rs564346267 750 dbSNP
rs1300377253 754 dbSNP
rs1023965250 755 dbSNP
rs143957422 757 dbSNP
rs1013542892 761 dbSNP
rs531252347 765 dbSNP
rs140091728 771 dbSNP
rs1052400052 772 dbSNP
rs1270242720 773 dbSNP
rs1469730347 783 dbSNP
rs935339182 785 dbSNP
rs763904241 790 dbSNP
rs903922155 791 dbSNP
rs774036381 802 dbSNP
rs1239856238 805 dbSNP
rs188457622 806 dbSNP
rs1182751755 808 dbSNP
rs893715486 812 dbSNP
rs573644297 813 dbSNP
rs572758397 814 dbSNP
rs1031445015 815 dbSNP
rs1419282769 816 dbSNP
rs1184364529 821 dbSNP
rs1404520868 824 dbSNP
rs1462836185 826 dbSNP
rs999511021 829 dbSNP
rs1337766036 830 dbSNP
rs906625944 862 dbSNP
rs1429085484 867 dbSNP
rs560335414 871 dbSNP
rs922164701 874 dbSNP
rs1259510459 881 dbSNP
rs1203184618 886 dbSNP
rs1040946853 889 dbSNP
rs1263706855 890 dbSNP
rs748896149 902 dbSNP
rs908145453 903 dbSNP
rs1190765324 909 dbSNP
rs1251869216 912 dbSNP
rs948220720 913 dbSNP
rs1206566641 915 dbSNP
rs371571850 915 dbSNP
rs565603735 921 dbSNP
rs895355628 925 dbSNP
rs982387820 926 dbSNP
rs942314141 935 dbSNP
rs1405018351 939 dbSNP
rs1399247547 942 dbSNP
rs1318086195 944 dbSNP
rs1305511397 947 dbSNP
rs951072666 949 dbSNP
rs1296606283 952 dbSNP
rs919661228 959 dbSNP
rs774871003 960 dbSNP
rs908115639 970 dbSNP
rs1222406776 971 dbSNP
rs769292684 972 dbSNP
rs1263612428 976 dbSNP
rs1023427407 988 dbSNP
rs1312276234 990 dbSNP
rs1013843695 991 dbSNP
rs960590279 992 dbSNP
rs1283378158 999 dbSNP
rs540333718 1010 dbSNP
rs929629123 1011 dbSNP
rs922347422 1022 dbSNP
rs1200234678 1029 dbSNP
rs1379816147 1057 dbSNP
rs1218128383 1059 dbSNP
rs1469102911 1067 dbSNP
rs999514571 1074 dbSNP
rs903889709 1095 dbSNP
rs1044199241 1099 dbSNP
rs1354251835 1107 dbSNP
rs963782634 1113 dbSNP
rs1164678424 1145 dbSNP
rs1018150118 1150 dbSNP
rs1363337019 1154 dbSNP
rs1403735165 1155 dbSNP
rs1301430953 1161 dbSNP
rs996238551 1165 dbSNP
rs989296941 1168 dbSNP
rs900593623 1169 dbSNP
rs1351065118 1171 dbSNP
rs957961811 1186 dbSNP
rs1289774928 1187 dbSNP
rs752616575 1190 dbSNP
rs1223300361 1199 dbSNP
rs1269615100 1199 dbSNP
rs1181664640 1203 dbSNP
rs185638863 1203 dbSNP
rs1183041713 1212 dbSNP
rs1441859083 1213 dbSNP
rs1162077319 1215 dbSNP
rs1382993024 1224 dbSNP
rs1423681265 1225 dbSNP
rs1293571392 1227 dbSNP
rs1392315330 1227 dbSNP
rs1389201199 1230 dbSNP
rs1328054282 1231 dbSNP
rs1040519435 1235 dbSNP
rs1419700552 1236 dbSNP
rs1241972041 1245 dbSNP
rs1252793398 1252 dbSNP
rs1178809788 1258 dbSNP
rs1245867930 1258 dbSNP
rs193134950 1264 dbSNP
rs557996216 1282 dbSNP
rs1223039959 1289 dbSNP
rs1047994168 1293 dbSNP
rs1356223233 1297 dbSNP
rs376649689 1305 dbSNP
rs1459524092 1321 dbSNP
rs1361116940 1325 dbSNP
rs1289075072 1338 dbSNP
rs1243648348 1345 dbSNP
rs906492879 1346 dbSNP
rs545419064 1347 dbSNP
rs1164973934 1351 dbSNP
rs919641806 1360 dbSNP
rs1012318071 1364 dbSNP
rs1166819714 1369 dbSNP
rs1400921141 1376 dbSNP
rs895220105 1377 dbSNP
rs1037856668 1380 dbSNP
rs974148764 1385 dbSNP
rs1390155997 1391 dbSNP
rs969130696 1409 dbSNP
rs537718730 1410 dbSNP
rs1324923629 1415 dbSNP
rs991976227 1422 dbSNP
rs76380594 1426 dbSNP
rs1030914961 1427 dbSNP
rs1202378830 1429 dbSNP
rs1426999183 1430 dbSNP
rs1364126901 1436 dbSNP
rs555458206 1442 dbSNP
rs922326699 1449 dbSNP
rs1183969803 1450 dbSNP
rs1257760108 1453 dbSNP
rs1426424019 1457 dbSNP
rs1191836159 1480 dbSNP
rs1423763792 1484 dbSNP
rs1466755237 1486 dbSNP
rs1174134180 1497 dbSNP
rs1163130046 1499 dbSNP
rs976812308 1511 dbSNP
rs1405273919 1513 dbSNP
rs1466312389 1517 dbSNP
rs1304433414 1520 dbSNP
rs999485078 1521 dbSNP
rs1383069264 1525 dbSNP
rs371469005 1529 dbSNP
rs1022262529 1533 dbSNP
rs1278899236 1534 dbSNP
rs910951873 1535 dbSNP
rs989328019 1540 dbSNP
rs957825377 1553 dbSNP
rs1283129275 1568 dbSNP
rs996595540 1568 dbSNP
rs535430594 1575 dbSNP
rs923860189 1576 dbSNP
rs1259406882 1583 dbSNP
rs1200085876 1589 dbSNP
rs1490766943 1592 dbSNP
rs1484669741 1605 dbSNP
rs971041662 1606 dbSNP
rs978071569 1606 dbSNP
rs1025002659 1616 dbSNP
rs1351018005 1631 dbSNP
rs576426052 1635 dbSNP
rs1040881656 1639 dbSNP
rs1343268207 1639 dbSNP
rs1261967316 1640 dbSNP
rs1298986650 1646 dbSNP
rs777664046 1647 dbSNP
rs1362696402 1661 dbSNP
rs1236301861 1663 dbSNP
rs1009004701 1667 dbSNP
rs1302690129 1669 dbSNP
rs886640261 1671 dbSNP
rs1047964213 1680 dbSNP
rs758726739 1700 dbSNP
rs1343953956 1705 dbSNP
rs1323326459 1706 dbSNP
rs1286220339 1707 dbSNP
rs1382981918 1707 dbSNP
rs1012183687 1712 dbSNP
rs959465831 1713 dbSNP
rs1387506564 1716 dbSNP
rs1245664678 1739 dbSNP
rs1488755172 1744 dbSNP
rs1156864595 1747 dbSNP
rs1192803199 1749 dbSNP
rs899420355 1752 dbSNP
rs535886032 1753 dbSNP
rs1438777209 1774 dbSNP
rs1038010306 1778 dbSNP
rs566851674 1781 dbSNP
rs916320447 1793 dbSNP
rs1006353099 1800 dbSNP
rs879362643 1803 dbSNP
rs939164782 1814 dbSNP
rs752905028 1820 dbSNP
rs556343996 1833 dbSNP
rs1176983658 1834 dbSNP
rs1373271338 1836 dbSNP
rs1447973537 1844 dbSNP
rs923733013 1845 dbSNP
rs977930330 1856 dbSNP
rs997808209 1858 dbSNP
rs902076771 1862 dbSNP
rs1040753317 1870 dbSNP
rs1481382615 1871 dbSNP
rs1223131847 1873 dbSNP
rs1426921749 1882 dbSNP
rs1197985889 1884 dbSNP
rs942316144 1885 dbSNP
rs910984624 1892 dbSNP
rs1239816598 1896 dbSNP
rs1263465613 1897 dbSNP
rs1203027917 1912 dbSNP
rs546645655 1913 dbSNP
rs539557831 1926 dbSNP
rs1053496483 1927 dbSNP
rs1464018517 1928 dbSNP
rs1407100337 1929 dbSNP
rs967964044 1930 dbSNP
rs1354464588 1937 dbSNP
rs936400734 1947 dbSNP
rs367551358 1953 dbSNP
rs1333762218 1961 dbSNP
rs1263225174 1965 dbSNP
rs1022654473 1966 dbSNP
rs570676817 1967 dbSNP
rs923829279 1982 dbSNP
rs978314506 1992 dbSNP
rs974751235 2007 dbSNP
rs190152127 2009 dbSNP
rs1322107846 2022 dbSNP
rs1274629698 2030 dbSNP
rs1229523602 2056 dbSNP
rs1228669349 2068 dbSNP
rs965100631 2075 dbSNP
rs1199242918 2086 dbSNP
rs1018976384 2099 dbSNP
rs1259938130 2099 dbSNP
rs1186598934 2100 dbSNP
rs1238260768 2111 dbSNP
rs531090123 2115 dbSNP
rs1008973590 2118 dbSNP
rs1184825058 2120 dbSNP
rs1423071468 2122 dbSNP
rs868671324 2148 dbSNP
rs1173410349 2152 dbSNP
rs959332246 2169 dbSNP
rs1414204204 2171 dbSNP
rs1335341904 2172 dbSNP
rs1359377071 2175 dbSNP
rs1449823204 2179 dbSNP
rs1470913275 2185 dbSNP
rs374789276 2190 dbSNP
rs1339210312 2194 dbSNP
rs1218740050 2202 dbSNP
rs1016305239 2212 dbSNP
rs1475590564 2236 dbSNP
rs1321404429 2251 dbSNP
rs1199661804 2259 dbSNP
rs1279119748 2274 dbSNP
rs1444322293 2283 dbSNP
rs1213849691 2284 dbSNP
rs1006295915 2287 dbSNP
rs950849044 2288 dbSNP
rs1195948527 2308 dbSNP
rs1427797768 2311 dbSNP
rs1478025682 2314 dbSNP
rs1173493512 2323 dbSNP
rs548697103 2329 dbSNP
rs1427750632 2339 dbSNP
rs528832562 2343 dbSNP
rs1295917021 2359 dbSNP
rs1359498832 2360 dbSNP
rs1190496385 2367 dbSNP
rs765289619 2368 dbSNP
rs1243205920 2378 dbSNP
rs1232505094 2379 dbSNP
rs998070927 2380 dbSNP
rs1346815006 2389 dbSNP
rs1039270476 2390 dbSNP
rs902107693 2390 dbSNP
rs1488772586 2397 dbSNP
rs1218881829 2401 dbSNP
rs560199541 2402 dbSNP
rs1266914491 2405 dbSNP
rs1460351326 2415 dbSNP
rs540296969 2416 dbSNP
rs1278601837 2418 dbSNP
rs1468863134 2419 dbSNP
rs889497340 2422 dbSNP
rs1379302227 2426 dbSNP
rs185055465 2436 dbSNP
rs1341822141 2438 dbSNP
rs1053438891 2439 dbSNP
rs1385764024 2457 dbSNP
rs1268799139 2458 dbSNP
rs1332776152 2461 dbSNP
rs936461400 2468 dbSNP
rs564249643 2479 dbSNP
rs1308345661 2485 dbSNP
rs923666372 2489 dbSNP
rs1242642669 2499 dbSNP
rs1289893732 2505 dbSNP
rs1355679486 2505 dbSNP
rs1210514132 2510 dbSNP
rs1270021375 2522 dbSNP
rs1436647758 2523 dbSNP
rs544427551 2527 dbSNP
rs774072142 2544 dbSNP
rs1042240225 2548 dbSNP
rs1239223231 2564 dbSNP
rs1441959656 2572 dbSNP
rs1180085407 2579 dbSNP
rs1366359858 2580 dbSNP
rs949212292 2585 dbSNP
rs1383882793 2586 dbSNP
rs1392786625 2591 dbSNP
rs917840857 2596 dbSNP
rs151179697 2597 dbSNP
rs192153510 2598 dbSNP
rs1310762274 2602 dbSNP
rs142105386 2603 dbSNP
rs937922560 2605 dbSNP
rs909246714 2606 dbSNP
rs1316571022 2612 dbSNP
rs984738413 2616 dbSNP
rs950849997 2626 dbSNP
rs1459321728 2634 dbSNP
rs1026789264 2635 dbSNP
rs1253630366 2636 dbSNP
rs1333382964 2639 dbSNP
rs769002788 2651 dbSNP
rs1422945882 2656 dbSNP
rs1187597524 2657 dbSNP
rs1369742233 2663 dbSNP
rs976286391 2668 dbSNP
rs1169823746 2674 dbSNP
rs966572761 2675 dbSNP
rs1398292103 2678 dbSNP
rs1017786333 2682 dbSNP
rs1401733232 2683 dbSNP
rs1007845709 2691 dbSNP
rs893377875 2714 dbSNP
rs1032033373 2719 dbSNP
rs370389034 2727 dbSNP
rs902272713 2732 dbSNP
rs1385526448 2737 dbSNP
rs568248032 2738 dbSNP
rs535388698 2739 dbSNP
rs762645518 2747 dbSNP
rs1486983632 2756 dbSNP
rs772769223 2758 dbSNP
rs1192313934 2760 dbSNP
rs11553682 2772 dbSNP
rs1424230479 2773 dbSNP
rs1478786515 2781 dbSNP
rs1442190997 2783 dbSNP
rs766882420 2787 dbSNP
rs1183091101 2789 dbSNP
rs572861218 2793 dbSNP
rs1304743171 2799 dbSNP
rs1440110550 2802 dbSNP
rs1298954389 2810 dbSNP
rs896363450 2810 dbSNP
rs148671531 2811 dbSNP
rs1218029413 2825 dbSNP
rs1313103819 2829 dbSNP
rs1271313223 2830 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 1783.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000258198.2 | 3UTR | AUAUACUAUUUUUUUCCUUUUUUAAUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
LUSC -0.979 0.07 -1.000 0.5 3 Click to see details
STAD -0.976 0.07 -1.000 0.5 3 Click to see details
UCEC 0.946 0.11 1.000 0.5 3 Click to see details
HNSC 0.651 0.17 0.400 0.3 4 Click to see details
THCA 0.527 0.24 0.800 0.1 4 Click to see details
BLCA -0.287 0.41 0.500 0.33 3 Click to see details
BLCA -0.287 0.41 0.500 0.33 3 Click to see details
BLCA -0.287 0.41 0.500 0.33 3 Click to see details
BLCA -0.287 0.41 0.500 0.33 3 Click to see details
BLCA -0.287 0.41 0.500 0.33 3 Click to see details
BLCA -0.287 0.41 0.500 0.33 3 Click to see details
BLCA -0.287 0.41 0.500 0.33 3 Click to see details
153 hsa-miR-548f-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT075032 DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 2 2
MIRT076422 PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 2 2
MIRT077732 ZNF652 zinc finger protein 652 2 2
MIRT097425 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT099605 ID4 inhibitor of DNA binding 4, HLH protein 2 4
MIRT105530 ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT109834 MID1IP1 MID1 interacting protein 1 2 8
MIRT132952 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT134169 KLHL42 kelch like family member 42 2 4
MIRT138721 MPP5 membrane palmitoylated protein 5 2 2
MIRT187755 ESYT1 extended synaptotagmin 1 2 2
MIRT208054 LRRC58 leucine rich repeat containing 58 2 2
MIRT222029 PURB purine rich element binding protein B 2 2
MIRT243457 LMLN leishmanolysin like peptidase 2 2
MIRT266062 FJX1 four jointed box 1 2 6
MIRT279835 ZFP36L1 ZFP36 ring finger protein like 1 2 2
MIRT285122 TERF2IP TERF2 interacting protein 2 6
MIRT323906 TMEM245 transmembrane protein 245 2 2
MIRT325430 CKS2 CDC28 protein kinase regulatory subunit 2 2 2
MIRT338909 HMGN2 high mobility group nucleosomal binding domain 2 2 6
MIRT350498 MRGBP MRG domain binding protein 2 6
MIRT405877 CALM1 calmodulin 1 2 2
MIRT442081 NDRG1 N-myc downstream regulated 1 2 2
MIRT442371 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442397 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT444255 INTS8 integrator complex subunit 8 2 2
MIRT444875 ISPD isoprenoid synthase domain containing 2 2
MIRT445407 PTCHD1 patched domain containing 1 2 4
MIRT445493 HMGN4 high mobility group nucleosomal binding domain 4 2 2
MIRT446136 ST6GAL2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 2 2
MIRT446261 GRAMD1C GRAM domain containing 1C 2 2
MIRT446353 EML6 echinoderm microtubule associated protein like 6 2 2
MIRT446403 SNX1 sorting nexin 1 2 2
MIRT446826 STK17A serine/threonine kinase 17a 2 2
MIRT447222 ABI2 abl interactor 2 2 2
MIRT447705 ERP44 endoplasmic reticulum protein 44 2 2
MIRT448248 ZNF774 zinc finger protein 774 2 2
MIRT448819 FKBP1A FK506 binding protein 1A 2 4
MIRT449060 ZNF558 zinc finger protein 558 2 2
MIRT449668 ZNF451 zinc finger protein 451 2 2
MIRT449974 ZNF555 zinc finger protein 555 2 2
MIRT450476 TRMT5 tRNA methyltransferase 5 2 4
MIRT450483 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT467980 SKIL SKI like proto-oncogene 2 4
MIRT470733 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT475012 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT490478 FEM1C fem-1 homolog C 2 2
MIRT497368 DIRAS2 DIRAS family GTPase 2 2 2
MIRT497561 PRLR prolactin receptor 2 2
MIRT497943 ABCB7 ATP binding cassette subfamily B member 7 2 2
MIRT498014 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT498206 ACVR2B activin A receptor type 2B 2 2
MIRT502637 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT505633 SLC16A1 solute carrier family 16 member 1 2 6
MIRT512261 ARPP19 cAMP regulated phosphoprotein 19 2 6
MIRT518247 SCIN scinderin 2 4
MIRT520483 TRIM13 tripartite motif containing 13 2 4
MIRT521196 SBNO1 strawberry notch homolog 1 2 6
MIRT522764 LARP1 La ribonucleoprotein domain family member 1 2 4
MIRT525021 ABHD13 abhydrolase domain containing 13 2 4
MIRT525100 FRK fyn related Src family tyrosine kinase 2 2
MIRT525268 CD226 CD226 molecule 2 4
MIRT528662 FUNDC2 FUN14 domain containing 2 2 2
MIRT529353 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 2
MIRT529651 ZNF81 zinc finger protein 81 2 2
MIRT529815 TMLHE trimethyllysine hydroxylase, epsilon 2 2
MIRT530316 TNFRSF10D TNF receptor superfamily member 10d 2 2
MIRT532775 LDHD lactate dehydrogenase D 2 2
MIRT533888 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT535657 NLN neurolysin 2 4
MIRT536351 LEFTY1 left-right determination factor 1 2 2
MIRT538089 DGKE diacylglycerol kinase epsilon 2 2
MIRT538118 DDX6 DEAD-box helicase 6 2 2
MIRT538950 BMP2K BMP2 inducible kinase 2 2
MIRT539086 ARNTL aryl hydrocarbon receptor nuclear translocator like 2 4
MIRT539374 ADSS adenylosuccinate synthase 2 6
MIRT539860 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 4
MIRT539976 SPRY1 sprouty RTK signaling antagonist 1 2 2
MIRT541264 GPC4 glypican 4 2 4
MIRT543374 CYB5B cytochrome b5 type B 2 2
MIRT543472 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT543685 HHLA1 HERV-H LTR-associating 1 2 2
MIRT543877 SLC16A9 solute carrier family 16 member 9 2 2
MIRT544021 KLRC3 killer cell lectin like receptor C3 2 2
MIRT544119 TTLL11 tubulin tyrosine ligase like 11 2 4
MIRT545311 SPC25 SPC25, NDC80 kinetochore complex component 2 2
MIRT545769 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT545991 XKR4 XK related 4 2 2
MIRT546078 VEZF1 vascular endothelial zinc finger 1 2 2
MIRT546717 RNPS1 RNA binding protein with serine rich domain 1 2 4
MIRT548964 CCNT2 cyclin T2 2 2
MIRT552133 MED10 mediator complex subunit 10 2 2
MIRT553941 STARD3NL STARD3 N-terminal like 2 2
MIRT554148 SLX4 SLX4 structure-specific endonuclease subunit 2 2
MIRT555009 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT555495 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT555651 PHF12 PHD finger protein 12 2 2
MIRT557631 GJD3 gap junction protein delta 3 2 2
MIRT557989 FAM160B1 family with sequence similarity 160 member B1 2 2
MIRT558838 CDCA4 cell division cycle associated 4 2 4
MIRT563344 RPLP0 ribosomal protein lateral stalk subunit P0 2 2
MIRT563902 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564263 DEPDC1B DEP domain containing 1B 2 2
MIRT565516 SOX4 SRY-box 4 2 2
MIRT565847 SCML2 Scm polycomb group protein like 2 2 2
MIRT567174 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT573142 ABT1 activator of basal transcription 1 2 2
MIRT573248 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT573740 KHSRP KH-type splicing regulatory protein 2 2
MIRT573983 DDX21 DExD-box helicase 21 2 2
MIRT574478 RPS16 ribosomal protein S16 2 2
MIRT608343 ZRANB1 zinc finger RANBP2-type containing 1 2 2
MIRT609782 NHSL1 NHS like 1 2 2
MIRT612536 RSF1 remodeling and spacing factor 1 2 2
MIRT613193 CLOCK clock circadian regulator 2 2
MIRT617539 GRK4 G protein-coupled receptor kinase 4 2 2
MIRT617779 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT620252 PCK1 phosphoenolpyruvate carboxykinase 1 2 2
MIRT621740 TNPO2 transportin 2 2 2
MIRT628105 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT629471 CRLS1 cardiolipin synthase 1 2 6
MIRT638139 TTC26 tetratricopeptide repeat domain 26 2 2
MIRT641039 PITPNB phosphatidylinositol transfer protein beta 2 2
MIRT642453 CLUAP1 clusterin associated protein 1 2 2
MIRT643159 NCK1 NCK adaptor protein 1 2 2
MIRT643260 ZNF566 zinc finger protein 566 2 2
MIRT649827 LIPG lipase G, endothelial type 2 2
MIRT651199 ZNF280B zinc finger protein 280B 2 2
MIRT654633 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 2
MIRT656633 LRRC15 leucine rich repeat containing 15 2 2
MIRT660588 APP amyloid beta precursor protein 2 2
MIRT660865 AFAP1 actin filament associated protein 1 2 2
MIRT664141 ATP6V1G3 ATPase H+ transporting V1 subunit G3 2 2
MIRT666130 SPATS2L spermatogenesis associated serine rich 2 like 2 2
MIRT666391 SHMT1 serine hydroxymethyltransferase 1 2 2
MIRT667143 NT5DC3 5'-nucleotidase domain containing 3 2 2
MIRT673834 SPPL2A signal peptide peptidase like 2A 2 2
MIRT675539 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT693450 PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma 2 2
MIRT694852 KRT80 keratin 80 2 2
MIRT696047 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT696951 CERK ceramide kinase 2 2
MIRT697839 UBL3 ubiquitin like 3 2 2
MIRT700270 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT702733 INSIG1 insulin induced gene 1 2 2
MIRT705310 AVL9 AVL9 cell migration associated 2 2
MIRT705325 ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 2 2
MIRT707735 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT711798 MLLT1 MLLT1, super elongation complex subunit 2 2
MIRT713736 SUCO SUN domain containing ossification factor 2 2
MIRT715766 SKA2 spindle and kinetochore associated complex subunit 2 2 2
MIRT719186 KCNS2 potassium voltage-gated channel modifier subfamily S member 2 2 2
MIRT719478 PECR peroxisomal trans-2-enoyl-CoA reductase 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-548f 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548f-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-548f-3p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (WM266) (1uM)
hsa-miR-548f-3p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (WM266) (200nM)
hsa-miR-548f-3p Trametinib 11707110 NSC758246 approved sensitive High Melanoma cell line (WM266) (200nM)
hsa-miR-548f-3p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (WM266) (500nM)
hsa-miR-548f-3p Trametinib 11707110 NSC758246 approved sensitive High Melanoma cell line (WM266) (1uM)
hsa-miR-548f-3p Trametinib 11707110 NSC758246 approved sensitive High Melanoma cell line (WM266) (500nM)
hsa-miR-548f-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-548f-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-548f-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-548f-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-548f-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-548f-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-548f-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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